mRNA_2950 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347800
Unique NamemRNA_2950
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|347800 vs. uniprot
Match: A0A835ZDR9_9STRA (Lon protease C-terminal proteolytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDR9_9STRA)

HSP 1 Score: 2264 bits (5867), Expect = 0.000e+0
Identity = 1251/1251 (100.00%), Postives = 1251/1251 (100.00%), Query Frame = 1
Query:    1 MDASGDQKGATQLDEGSVEDPQVQALAMNLAEAAAGLLAALQTRGGVSAAAASPELRSLSRAATASAATAPGAMADAIVSSLASVSAQQKQAVLEAADLVTRLTKALEVVNEQTQIVALSSKLKSSVDERLMSQQREYYLRQQLKAIREELGEEGDGAXXXXXXXDDAAEVTELTARLEKARLPPAARAAADKELRRLRRMPPTQPERGVVATYLELMADLPWSALSPERVADLQAWRRRWRRLYRDAQAQGVRFSTRGGAGYPRLSVSDKYWEMVSLSLAREQLDADHHGLEPVKRRLIEYMAVRLLRGKDQESRGSILCLVGPPGVGKTSLGRSVAVALGRKFQRLSLGGVHDEASIRGHRRTYIGALPGLILQSLKRAQTRNPVLLLDEVDKMGKWGTGGDPAAALLEVLDPEQNATFVDSYLGLPFDLSRVLFVATANATDTIPEALLDRMEVLEVPGYTLEEKLKIAREHLLPKQMHECGVTAEHMEVMPAALSEAVSRYTREAGVRQLERQLGALCRHVALKASAAQGVKDRRGSAAPHDAGLSGAARCKSAAAAAAALQCCMRGLVAAELAPAGPSTAPVQRLSVALSADHAAHDDADGAAEPGAADFAAADPSLLEQLQGAAASAGGDATSAQQQGGVGLSVGPPESADDVAVAVADAXXXXXXXXXXXXXETETAALPFERVVVDVEALHAILGRPRHEREGAADFLAPGVCTGLAWTRAGGELLFVECSGVAGGGGGALTLTGQLGEVSAGLPQLLPLLLLLREGGVMKESATLALSWIRSNEASICTSLGLPPPRQAFVLDPFSTDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRSIDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLEDLPADVRDALRFSCVSTLLEAFQVLFTSADAAXXXXXXXXXXXXXPESAPTAMAASATAAQTEAAINAYVLQCISTRAGLQQAARFLQPKTVAIPDDDCFAAMQSKHPPAAPGEQLHELSGMVDQLVAKAADMPAELSLLQGEGIEPETVAKLIQRASPHSGAGPSGLRYSHLQDALRTSWGRHEFAAVLTRWLQAVMREAARLPDAFWQLHGAGRLTLLAEQQEDGTAKQRPIVCGEVLQRLCTSVYVADRKDFLAELLEPDGQYGVAVSAGAEKAAMAGKLAYELGHWQFMLDLKNAFNMVFVLAAAEWVAAQLPDFLDYFIGTYVRTRPRLLFQHVDGSTRIIMSQARV 3753
            MDASGDQKGATQLDEGSVEDPQVQALAMNLAEAAAGLLAALQTRGGVSAAAASPELRSLSRAATASAATAPGAMADAIVSSLASVSAQQKQAVLEAADLVTRLTKALEVVNEQTQIVALSSKLKSSVDERLMSQQREYYLRQQLKAIREELGEEGDGAXXXXXXXDDAAEVTELTARLEKARLPPAARAAADKELRRLRRMPPTQPERGVVATYLELMADLPWSALSPERVADLQAWRRRWRRLYRDAQAQGVRFSTRGGAGYPRLSVSDKYWEMVSLSLAREQLDADHHGLEPVKRRLIEYMAVRLLRGKDQESRGSILCLVGPPGVGKTSLGRSVAVALGRKFQRLSLGGVHDEASIRGHRRTYIGALPGLILQSLKRAQTRNPVLLLDEVDKMGKWGTGGDPAAALLEVLDPEQNATFVDSYLGLPFDLSRVLFVATANATDTIPEALLDRMEVLEVPGYTLEEKLKIAREHLLPKQMHECGVTAEHMEVMPAALSEAVSRYTREAGVRQLERQLGALCRHVALKASAAQGVKDRRGSAAPHDAGLSGAARCKSAAAAAAALQCCMRGLVAAELAPAGPSTAPVQRLSVALSADHAAHDDADGAAEPGAADFAAADPSLLEQLQGAAASAGGDATSAQQQGGVGLSVGPPESADDVAVAVADAXXXXXXXXXXXXXETETAALPFERVVVDVEALHAILGRPRHEREGAADFLAPGVCTGLAWTRAGGELLFVECSGVAGGGGGALTLTGQLGEVSAGLPQLLPLLLLLREGGVMKESATLALSWIRSNEASICTSLGLPPPRQAFVLDPFSTDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRSIDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLEDLPADVRDALRFSCVSTLLEAFQVLFTSADAAXXXXXXXXXXXXXPESAPTAMAASATAAQTEAAINAYVLQCISTRAGLQQAARFLQPKTVAIPDDDCFAAMQSKHPPAAPGEQLHELSGMVDQLVAKAADMPAELSLLQGEGIEPETVAKLIQRASPHSGAGPSGLRYSHLQDALRTSWGRHEFAAVLTRWLQAVMREAARLPDAFWQLHGAGRLTLLAEQQEDGTAKQRPIVCGEVLQRLCTSVYVADRKDFLAELLEPDGQYGVAVSAGAEKAAMAGKLAYELGHWQFMLDLKNAFNMVFVLAAAEWVAAQLPDFLDYFIGTYVRTRPRLLFQHVDGSTRIIMSQARV
Sbjct:    1 MDASGDQKGATQLDEGSVEDPQVQALAMNLAEAAAGLLAALQTRGGVSAAAASPELRSLSRAATASAATAPGAMADAIVSSLASVSAQQKQAVLEAADLVTRLTKALEVVNEQTQIVALSSKLKSSVDERLMSQQREYYLRQQLKAIREELGEEGDGAXXXXXXXDDAAEVTELTARLEKARLPPAARAAADKELRRLRRMPPTQPERGVVATYLELMADLPWSALSPERVADLQAWRRRWRRLYRDAQAQGVRFSTRGGAGYPRLSVSDKYWEMVSLSLAREQLDADHHGLEPVKRRLIEYMAVRLLRGKDQESRGSILCLVGPPGVGKTSLGRSVAVALGRKFQRLSLGGVHDEASIRGHRRTYIGALPGLILQSLKRAQTRNPVLLLDEVDKMGKWGTGGDPAAALLEVLDPEQNATFVDSYLGLPFDLSRVLFVATANATDTIPEALLDRMEVLEVPGYTLEEKLKIAREHLLPKQMHECGVTAEHMEVMPAALSEAVSRYTREAGVRQLERQLGALCRHVALKASAAQGVKDRRGSAAPHDAGLSGAARCKSAAAAAAALQCCMRGLVAAELAPAGPSTAPVQRLSVALSADHAAHDDADGAAEPGAADFAAADPSLLEQLQGAAASAGGDATSAQQQGGVGLSVGPPESADDVAVAVADAXXXXXXXXXXXXXETETAALPFERVVVDVEALHAILGRPRHEREGAADFLAPGVCTGLAWTRAGGELLFVECSGVAGGGGGALTLTGQLGEVSAGLPQLLPLLLLLREGGVMKESATLALSWIRSNEASICTSLGLPPPRQAFVLDPFSTDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRSIDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLEDLPADVRDALRFSCVSTLLEAFQVLFTSADAAXXXXXXXXXXXXXPESAPTAMAASATAAQTEAAINAYVLQCISTRAGLQQAARFLQPKTVAIPDDDCFAAMQSKHPPAAPGEQLHELSGMVDQLVAKAADMPAELSLLQGEGIEPETVAKLIQRASPHSGAGPSGLRYSHLQDALRTSWGRHEFAAVLTRWLQAVMREAARLPDAFWQLHGAGRLTLLAEQQEDGTAKQRPIVCGEVLQRLCTSVYVADRKDFLAELLEPDGQYGVAVSAGAEKAAMAGKLAYELGHWQFMLDLKNAFNMVFVLAAAEWVAAQLPDFLDYFIGTYVRTRPRLLFQHVDGSTRIIMSQARV 1251          
BLAST of jgi.p|Trimin1|347800 vs. uniprot
Match: D8LGC2_ECTSI (Lon protease homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC2_ECTSI)

HSP 1 Score: 621 bits (1601), Expect = 8.660e-199
Identity = 433/998 (43.39%), Postives = 558/998 (55.91%), Query Frame = 1
Query:   40 DEGSVEDPQVQALAMNLAEAAAGLLAALQTRGGVSAAAASPELRSLSRAATASAATAPGAMADAIVSSLASVSAQQKQAVLEAADLVTRLTKALEVVNEQTQIVALSSKLKSSVDERLMSQQREYYLRQQLKAIREELGEEGDGAXXXXXXXDDAAEVTELTARLEKARLPPAARAAADKELRRLRRMPPTQPERGVVATYLELMADLPWSALSPERVADLQAWRRRWRRLYRDAQAQGVRFSTRGGAGYPRLSVSDKYWEMVSLSLAREQLDADHHGLEPVKRRLIEYMAVRLLRGKDQESRGSILCLVGPPGVGKTSLGRSVAVALGRKFQRLSLGGVHDEASIRGHRRTYIGALPGLILQSLKRAQTRNPVLLLDEVDKMGKWGTGGDPAAALLEVLDPEQNATFVDSYLGLPFDLSRVLFVATANATDTIPEALLDRMEVLEVPGYTLEEKLKIAREHLLPKQMHECGVTAEHMEVMPAALSEAVSRYTREAGVRQLERQLGALCRHVALKASAAQ-----GVKDRRGSAAPHDAGLSGAARCKSAAAAAAALQCCMRGLVAAELAPA----GPSTAPVQRL----------SVALSADHAAHDDADGAAEPGAAD-FAAADPSLLEQLQGAAASAGGDATSAQQQGGVGLSV------------------GPPESADDVAVAVADAXXXXXXXXXXXXXETETAALPFERVVVDVEALHAILGRPRHEREGAADFLAPGVCTGLAWTRAGGELLFVECSGVAGGGGGALTLTGQLGEVSAGLPQLLPLLLLLREGGVMKESATLALSWIRSNEASICTSLGLP---------------------------------PPRQAF-------VLDP----FSTDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRSIDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLEDLPADVRDALRFSCVSTLLEAFQVLFTSAD 2787
            D+GS+ D +V+AL++NL EAA  LL  L++R         P   +      A +A +PGA+AD + SS+ ++   QKQA+LE   L  RL + LE+V EQT++++++SK+ S V+ +L S+ REYYLRQQLKAIR ELGEEG  +        +  EV  L A++E A LPP A   A ++L RL+RM  +QPE  V+ TYLE +++LPW+ +S E                                                +  A+ QLD DH+GL  VK+R++EY+AVR L     +S+GSILCLVGPPGVGKTSLGRS+A AL RKFQRLSLGGVHDEA IRGHRRTYIGA+PG I++ L+RA TRNPV+LLDEVDK+G    GGDP+AALLEVLDPEQN +F D Y+ +PFDLS VLFVATAN  D IPE LLDR+EV+ +PGYTLEEK+KIA  +L+PKQM + GV AEHM +  + +    S YTREAGVRQLER+L A+CRHVALK    Q       +D +    P    L  A+  +++A  A               +PA       +AP+              V  +    A   AD AA  GA D +A A P+ L     A     G     + +G   +                    G   +A   AV  +D            XX      L F R+VV  E L  +LG   +E E AA    PG CTGLAWT  GGELLF+EC+ +   G GA+ LTG+LGEV                   M+ESA +ALSWIRS+E  IC  LGL                                   P           VL P     STD+H+HVPAG   KDGPSAG+AI S+LLSLL+GR+ID  V +TGE+TLRGLVLPVGGV+DKVLAA RGG+RH++LP RNR DLE++P++  + LRF+ V ++ +    LF + D
Sbjct:  174 DQGSIADAEVKALSLNLREAAQALLEVLKSRS-------HPRAMNAREILDAVSAASPGAVADVLASSI-NIPTNQKQAILEETSLEKRLRRVLELVREQTRVLSIASKINSEVEGKLNSRHREYYLRQQLKAIRSELGEEGGSS--------EGDEVAALEAKIEAAGLPPEASKVAKRDLSRLKRMQASQPEYTVIRTYLETVSELPWNRVSEET---------------------------------------------YDIRRAQRQLDKDHYGLNKVKQRIVEYIAVRSLLS---DSKGSILCLVGPPGVGKTSLGRSIAAALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGTRNPVMLLDEVDKIGSNVRGGDPSAALLEVLDPEQNDSFTDHYVNVPFDLSSVLFVATANKVDAIPEPLLDRLEVIHIPGYTLEEKVKIAEAYLIPKQMKKNGVGAEHMLLPRSTVLRVASSYTREAGVRQLERELAAVCRHVALKVGVWQQDPGSNNEDNK----PGGTSLRDASNGQTSAPEAKPSSXXXXXXXTFSASPAHLMRSRGSAPMDGSFLVRGGSICDGVVSNRSGLAGQRADAAA--GAVDGYARAPPAALASDGPAGVRHKGWLPEGRGRGXXXIXXXXXXXXXXXXXXXXXSARGEVVAAICAAVDGSDGNGHDRTLSPQQXXXXXRRPLAFPRIVVTCEMLRGVLGPELYESEVAARVATPGTCTGLAWTPTGGELLFIECTSMP--GTGAVKLTGKLGEV-------------------MQESAQIALSWIRSHEREICDRLGLTGGTVHATAAVTATGRXXXXXXXXXXGGSTGRTRSPLSGHEDGGGRGVLFPPGFFSSTDLHLHVPAGGVSKDGPSAGVAITSALLSLLLGRAIDTAVAMTGEITLRGLVLPVGGVRDKVLAARRGGIRHILLPSRNRGDLEEIPSEAAEGLRFTFVESIGDVLFALFPTGD 1080          
BLAST of jgi.p|Trimin1|347800 vs. uniprot
Match: A0A4D9CQU2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQU2_9STRA)

HSP 1 Score: 607 bits (1564), Expect = 5.120e-195
Identity = 420/948 (44.30%), Postives = 541/948 (57.07%), Query Frame = 1
Query:   40 DEGSVEDPQVQALAMNLAEAAAGLLAALQTRG----------------------GVSAAAASPELRSLSRAATASAATAPGAMADAIVSSLASVSAQQKQAVLEAADLVTRLTKALEVVNEQTQIVALSSKLKSSVDERLMSQQREYYLRQQLKAIREELGEEGDGAXXXXXXXDDAAEVTELTARLEKARLPPAARAAADKELRRLRRMPPTQPERGVVATYLELMADLPWSALSPERVADLQAWRRRWRRLYRDAQAQGVRFSTRGGAGYPRLSVSDKYWEMVSLSLAREQLDADHHGLEPVKRRLIEYMAVRLLRGKDQESRGSILCLVGPPGVGKTSLGRSVAVALGRKFQRLSLGGVHDEASIRGHRRTYIGALPGLILQSLKRAQTRNPVLLLDEVDKMGKWGTGGDPAAALLEVLDPEQNATFVDSYLGLPFDLSRVLFVATANATDTIPEALLDRMEVLEVPGYTLEEKLKIAREHLLPKQMHECGVTAEHMEVMPAALSEAVSRYTREAGVRQLERQLGALCRHVALKASAAQGVKDRRGSAAPHDAGLSGAARCKSAAAAAAALQCCMRGLVAAELAPAGPSTAPVQRLSVALSADHAAHDDADGAAEPGAADFAAADPSLLEQLQGAAASAGGDATSAQQQGGVGLSVGPPESADDVAVAVADAXXXXXXXXXXXXXETETAALPFERVVVDVEALHAILGRPRHEREGAADFLAPGVCTGLAWTRAGGELLFVECSGVAGGGGGALTLTGQLGEVSAGLPQLLPLLLLLREGGVMKESATLALSWIRSNEAS------ICTSLGLPPPRQAF------VLDPFS--TDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRSIDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLEDLPADVRDALRFSCVSTLLEAFQVLF 2775
            +EGS+ D +V+ALA+NL +A   L  AL+ R                       GV+ + + P L S    A +    +P A+AD +V+ L +V  + KQ +LE   L  RL  ALE++ EQ +I+ LSSK+ + V++RL ++QREYYLRQQLK I+E+LGEE DG+        +  ++TEL  RL+   LP   R AA+KELRRL+RM P+QPE  VV TYLE + DLPW                      +D + +     TR  +     +V + ++++ ++     QLD DHHGL  VKRR++EY+AVR L    +  +G ILCLVGPPGVGKTSLGRS+A ALGR+FQRLSLGGVHDEA IRGHRRTYIGALPG ILQ +K+A T +P+ LLDEVDK+G    GGDP+AA+LEVLDPEQN+TF D YL LP+DLSRV F+ATAN TDTIPE LLDRMEV+ +PGYT+EEK+ IA ++L+PKQ+   G++ EH+ V P A+    + YTREAGVRQ+ER+L A+CRHVA++                                            VA+  +PA      VQ                +G  E              E  +G             +QG                          XXXXXXXX E      PFE+VVV  + L  ILG  R+E EGA     PGV TGLAW   GGELLF+ECS V  GG G LT+TG+LGEV                   MKESA +A+SW++S   S        TS   P PR         VL P +  TD+H+HVPAGA PKDGPSAG+A+A +L SL+ GR + PT+ +TGE+TLRGLVLPVGG+K+K+LAAHRGG+RHV LP RN +DLEDLP+ VR  L F+    + +   V F
Sbjct:  131 EEGSLADSRVKALAINLRDATQELHKALRARATGALDVTGNGSSSNKNALDGATGVTKSQSQPFLPSAREVAESIQNASPSALADELVTHL-NVPLEAKQRLLEEPRLEARLRGALELIREQVEIIRLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGS--------EEDDMTELANRLKAKPLPRDVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPW--------------------FVKDDENEAGDTDTREPS-----NVEEAFFDVRAVEA---QLDRDHHGLGKVKRRILEYIAVRSLT---RSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIVTPRAVQSIATGYTREAGVRQIERELAAVCRHVAMQ--------------------------------------------VASHSSPA------VQ---------------VEGEREGEXXXXXXXXXXXXEMGEG-------------EQG--------------------------XXXXXXXXIEGVLTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQ-GGRGTLTITGKLGEV-------------------MKESAAIAMSWLKSKLPSPXXXXXXXTSSRTPSPRSEIENWVGPVLLPLTPTTDVHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIKEKLLAAHRGGIRHVCLPLRNAKDLEDLPSSVRQDLTFTLAGNITDVLAVAF 914          
BLAST of jgi.p|Trimin1|347800 vs. uniprot
Match: A0A836CGN9_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN9_9STRA)

HSP 1 Score: 561 bits (1447), Expect = 5.250e-173
Identity = 284/298 (95.30%), Postives = 287/298 (96.31%), Query Frame = 1
Query: 2851 AMAASATAAQTEAAINAYVLQCISTRAGLQQAARFLQPKTVAIPDDDCFAAMQSKHPPAAPGEQLHELSGMVDQLVAKAADMPAELSLLQGEGIEPETVAKLIQRASPHSGAGPSGLRYSHLQDALRTSWGRHEFAAVLTRWLQAVMREAARLPDAFWQLHGAGRLTLLAEQQEDGTAKQRPIVCGEVLQRLCTSVYVADRKDFLAELLEPDGQYGVAVSAGAEKAAMAGKLAYELGHWQFMLDLKNAFNMVFVLAAAEWVAAQLPDFLDYFIGTYVRTRPRLLFQHVDGSTRIIMSQ 3744
            A+ A     QTEAAINAYVLQC+ TR GLQQAARFLQPKTVAIPDDDCFAAMQSKHPPAAPGEQLHELSGMVDQLVAKAADMPAELSLLQGEGIEPETVAKLIQRASP+SGAG SGLRYSHLQDALRTSWGRHEFAAVLTRWLQ VMREAARLPDAFWQLHGAGRLT LAEQQEDGTAKQRPIVCGEVLQRLCTSVYVADRKDFLAELLEPDGQYGVAVSAGAEKAAMAGKLAYELGHWQFMLDLKNAFNMVFVLAAAEWVAAQLPDFLDYFIGTYVRTRPRLLFQHVDGSTRIIMSQ
Sbjct:  227 ALQAQQVGQQTEAAINAYVLQCMGTRGGLQQAARFLQPKTVAIPDDDCFAAMQSKHPPAAPGEQLHELSGMVDQLVAKAADMPAELSLLQGEGIEPETVAKLIQRASPYSGAGLSGLRYSHLQDALRTSWGRHEFAAVLTRWLQTVMREAARLPDAFWQLHGAGRLTPLAEQQEDGTAKQRPIVCGEVLQRLCTSVYVADRKDFLAELLEPDGQYGVAVSAGAEKAAMAGKLAYELGHWQFMLDLKNAFNMVFVLAAAEWVAAQLPDFLDYFIGTYVRTRPRLLFQHVDGSTRIIMSQ 524          
BLAST of jgi.p|Trimin1|347800 vs. uniprot
Match: A0A7S1CL80_9STRA (Lon protease homolog n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CL80_9STRA)

HSP 1 Score: 541 bits (1394), Expect = 7.700e-171
Identity = 373/859 (43.42%), Postives = 482/859 (56.11%), Query Frame = 1
Query:  232 IVSSLASVSAQQKQAVLEAADLVTRLTKALEVVNEQTQIVALSSKLKSSVDERLMSQQREYYLRQQLKAIREELGEEGDGAXXXXXXXDDAAEVTELTARLEKARLPPAARAAADKELRRLRRMPPTQPERGVVATYLELMADLPWSALSPERVADLQAWRRRWRRLYRDAQAQGVRFSTRGGAGYPRLSVSDKYWEMVSLSLAREQLDADHHGLEPVKRRLIEYMAVRLLRGKDQESRGSILCLVGPPGVGKTSLGRSVAVALGRKFQRLSLGGVHDEASIRGHRRTYIGALPGLILQSLKRAQTRNPVLLLDEVDKMGKWGTGGDPAAALLEVLDPEQNATFVDSYLGLPFDLSRVLFVATANATDTIPEALLDRMEVLEVPGYTLEEKLKIAREHLLPKQMHECGVTAEHMEVMPAALSEAVSRYTREAGVRQLERQLGALCRHVALKASAAQGVKDRRGSAAPHDAGLSGAARCKSAAAAAAALQCCMRGLVAAELAPAGPSTAPVQRLSVALSADHAAHDDADGAAE---PGAADFAAADPSLLEQLQGAAASAGGDATSAQQQGGVGLSVGPPESADDVAVAVADAXXXXXXXXXXXXXETETAALPFERVVVDVEALHAILGRPRHEREGAADFL-APGVCTGLAWTRAGGELLFVECSGVAGGGGGALTLTGQLGEVSAGLPQLLPLLLLLREGGVMKESATLALSWIRSNEASICTSLGLPPPRQAFVLDPFS-TDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRSIDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLEDLPADVRDALRFSCVSTLLEAFQVLFTSADAA 2793
            +++S+ SV    +Q VLEA D+V RL  A  VV  Q +I+ LS  + S V++ +   QR++YLRQQ++AIR+ELGE+ + +       DDA  + E+  RL  ARLP AA   A KEL+R RR+ P  PE  V+ TYLE MADLPWS+ S ER               RD                              L+ AREQLDADH GLE VK+R++E+++VR L  +   + G ILCLVGPPGVGKTSLGRS+A +LGRKF RL+LGGV DEA IRGHRRTYIGA+PG ++Q+LKR  T NPV+LLDEVDK+G     GDPAAALLEVLDPEQN TF D YLG+PFDLSR++FVATAN  + I  ALLDRMEV+ +PGYT  EK  IA  +LLPKQ+    +T  H+ V P  ++  +  YT EAGVR LERQL A+CRH A++ +  +  K       P+    +                    G         GP     Q +   +  D   HDD D A +    GAA     DP ++         AGG                    AD+  V   DA                     FE + V    L  +LG  R++ E +   +  PGV TG+AWT +GGELLFVE S +A  G G L LTGQLG+V                   MKESA  ALSWIRS+ A     LGLPP       +P +  D+H+H PAGA PKDGPSAGIA+ ++L+S+L GR++     +TGEVTLRG V+PVGG+K+KVL AHRGG+R VILP +N +D++D+PA+VR  +    V ++     ++F  +  A
Sbjct:  231 VLTSVCSVPVPDRQRVLEADDVVRRLEAASYVVASQLEILRLSKDIHSKVNQNVKESQRKFYLRQQMQAIRKELGEDEEVSEEA----DDA--LAEIEKRLVAARLPEAASKVAMKELKRARRLNPMLPEHSVLVTYLEWMADLPWSSSSRER---------------RD------------------------------LAAAREQLDADHFGLEKVKKRVLEFLSVRQLNPR---APGPILCLVGPPGVGKTSLGRSIAASLGRKFCRLALGGVRDEAEIRGHRRTYIGAMPGKLIQTLKRIGTNNPVILLDEVDKLGN-DYRGDPAAALLEVLDPEQNNTFTDHYLGVPFDLSRIMFVATANQLEPIAPALLDRMEVIRLPGYTAREKQNIAERYLLPKQLAAHSLTRRHLSVPPETVAHIIDNYTSEAGVRGLERQLAAVCRHAAVRLADWRHPK-------PYIPAPT------------------FEGPKPRYTYREGP-----QGVGYYVDGDFC-HDDDDAAVDGQAEGAASARDEDPDMV---------AGGT------------------DADEDVVDARDAA--------------------FELIDVRPPMLREVLGVARYDHETSDRGVDGPGVATGMAWTTSGGELLFVEASRMA--GSGHLILTGQLGDV-------------------MKESAKTALSWIRSHAAE----LGLPP-------NPIAKADVHVHFPAGAVPKDGPSAGIAVTTALISMLTGRTVRSDTAMTGEVTLRGAVMPVGGIKEKVLGAHRGGIRRVILPAKNAKDVDDIPAEVRGDMEIELVDSIDGLLGLVFDDSRVA 924          
BLAST of jgi.p|Trimin1|347800 vs. uniprot
Match: A0A2E6VX71_9DELT (Lon protease n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6VX71_9DELT)

HSP 1 Score: 520 bits (1339), Expect = 2.240e-164
Identity = 340/860 (39.53%), Postives = 452/860 (52.56%), Query Frame = 1
Query:  214 GAMADAIVSSLASVSAQQKQAVLEAADLVTRLTKALEVVNEQTQIVALSSKLKSSVDERLMSQQREYYLRQQLKAIREELGEEGDGAXXXXXXXDDAAEVTELTARLEKARLPPAARAAADKELRRLRRMPPTQPERGVVATYLELMADLPWSALSPERVADLQAWRRRWRRLYRDAQAQGVRFSTRGGAGYPRLSVSDKYWEMVSLSLAREQLDADHHGLEPVKRRLIEYMAVRLLRGKDQESRGSILCLVGPPGVGKTSLGRSVAVALGRKFQRLSLGGVHDEASIRGHRRTYIGALPGLILQSLKRAQTRNPVLLLDEVDKMGKWGTGGDPAAALLEVLDPEQNATFVDSYLGLPFDLSRVLFVATANATDTIPEALLDRMEVLEVPGYTLEEKLKIAREHLLPKQMHECGVTAEHMEVMPAALSEAVSRYTREAGVRQLERQLGALCRHVALKASAAQGVKDRRGSAAPHDAGLSGAARCKSAAAAAAALQCCMRGLVAAELAPAGPSTAPVQRLSVALSADHAAHDDADGAAEPGAADFAAADPSLLEQLQGAAASAGGDATSAQQQGGVGLSVGPPESADDVAVAVADAXXXXXXXXXXXXXETETAALPFERVVVDVEALHAILGRPRHEREGAADFLAPGVCTGLAWTRAGGELLFVECSGVAGGGGGALTLTGQLGEVSAGLPQLLPLLLLLREGGVMKESATLALSWIRSNEASICTSLGLPPPRQAFVLDPFSTDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRSIDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLEDLPADVRDALRFSCVSTLLEAFQVLFTSADAA 2793
            G +AD I +++   + ++KQ +LEA  L  RL K LE+++ Q +++ LS+K+ S V   +   QREYYLRQQLKAI++ELG+  D          D   + EL  RL +  L   A+ AA +ELRR+R M P+Q E  V  TYLE +AD+PW   + +                                              + L+ A+ QLD DH+GLE VK+R+IEY+AVR L+    + +G ILC +GPPGVGKTSLGRS+A ALGRKF R++LGGV DEA IRGHRRTYIGALPG I+Q +K++ + NPV L DE+DK+G     GDP++ALLEVLDPEQN TF D YL +PFDLS+VLF+ATAN  DTIP  L DRME++E+PGYT EEK  IA++HL+PKQ+ E G+T EH++     + +  + YTREAGVR LER++ A+CR VA+                                                                    A+H   D  +                                TS  Q     + V   ES +                              FE+VVVD E L  +LG  +   E A     PGV TGLAWT AGG+LLF+E + +  GG G+L LTG+LG+V                   MKESA  ALSWIRS       +  L        L+    D+H+H PAGA PKDGPSAGI I+++L+SL+  R +     +TGEVTLRG+VLPVGG+K+KVLAAHRGG++ VI+P RN +DL D+P +V+D + F  V  + E  +      + A
Sbjct:  177 GHLADLITANI-DATIEEKQEILEAVQLKRRLKKVLELLSRQYEVLKLSNKINSQVKGEMSRTQREYYLRQQLKAIKDELGDRDD----------DENGIDELERRLSETDLTEEAQKAAQRELRRMRNMQPSQAEYTVARTYLEWLADIPWHQYTEDN---------------------------------------------LDLNNAKNQLDDDHYGLEKVKKRIIEYLAVRKLK---DDMKGPILCFLGPPGVGKTSLGRSIADALGRKFHRIALGGVRDEAEIRGHRRTYIGALPGRIIQGMKKSGSHNPVFLFDEIDKLGS-DFRGDPSSALLEVLDPEQNNTFSDHYLDVPFDLSKVLFIATANQADTIPAPLRDRMEIIELPGYTFEEKENIAKQHLIPKQVKEHGITDEHIDFPDETILKIATSYTREAGVRNLEREIAAVCRSVAVDV------------------------------------------------------------------ANHTLKDSTE--------------------------------TSETQSDEENVEVAAQESNE------------------------------FEKVVVDTEKLEKVLGPEKFYNETAERTSVPGVATGLAWTAAGGDLLFIEATRM--GGKGSLILTGKLGDV-------------------MKESAQAALSWIRSR----ALNFKLADDMDTHFLE--KADVHVHFPAGAIPKDGPSAGITISTALVSLMTNRQVRSDTAMTGEVTLRGMVLPVGGIKEKVLAAHRGGVKRVIMPARNEKDLRDIPPNVKDEMEFIFVKKVDEVLEAALEGGNPA 821          
BLAST of jgi.p|Trimin1|347800 vs. uniprot
Match: A0A3N1XZP2_9GAMM (Lon protease n=1 Tax=Inmirania thermothiophila TaxID=1750597 RepID=A0A3N1XZP2_9GAMM)

HSP 1 Score: 509 bits (1310), Expect = 1.430e-160
Identity = 339/852 (39.79%), Postives = 436/852 (51.17%), Query Frame = 1
Query:  211 PGAMADAIVSSLASVSAQQKQAVLEAADLVTRLTKALEVVNEQTQIVALSSKLKSSVDERLMSQQREYYLRQQLKAIREELGEEGDGAXXXXXXXDDAAEVTELTARLEKARLPPAARAAADKELRRLRRMPPTQPERGVVATYLELMADLPWSALSPERVADLQAWRRRWRRLYRDAQAQGVRFSTRGGAGYPRLSVSDKYWEMVSLSLAREQLDADHHGLEPVKRRLIEYMAVRLLRGKDQESRGSILCLVGPPGVGKTSLGRSVAVALGRKFQRLSLGGVHDEASIRGHRRTYIGALPGLILQSLKRAQTRNPVLLLDEVDKMGKWGTGGDPAAALLEVLDPEQNATFVDSYLGLPFDLSRVLFVATANATDTIPEALLDRMEVLEVPGYTLEEKLKIAREHLLPKQMHECGVTAEHMEVMPAALSEAVSRYTREAGVRQLERQLGALCRHVALKASAAQGVKDRRGSAAPHDAGLSGAARCKSAAAAAAALQCCMRGLVAAELAPAGPSTAPVQRLSVALSADHAAHDDADGAAEPGAADFAAADPSLLEQLQGAAASAGGDATSAQQQGGVGLSVGPPESADDVAVAVADAXXXXXXXXXXXXXETETAALPFERVVVDVEALHAILGRPRHEREGAADFLAPGVCTGLAWTRAGGELLFVECSGVAGGGGGALTLTGQLGEVSAGLPQLLPLLLLLREGGVMKESATLALSWIRSNEASICTSLGLPPPRQAFVLDPFSTDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRSIDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLEDLPADVRDALRFSCVSTLLEAFQ 2766
            PG +AD + +    +   +KQ +LE  +L  RL + LE V+ + +++ L+ +++    E+L  +QREY+LR+QL+ IR ELGEE           D+  E+  L   +E+A +P      A +ELRRLRR P    E  ++ T+LE + +LPWS  S E                                              + L+ AR  LD DHH L+ VKRR++EY+AVR L   + E +  ILC VGPPGVGKTSLGRS+A ALGR F+R+SLGGVHDEA IRGHRRTY+GA+PG+++Q++++A TRNPVL+LDEVDK+G  G  GDPAAALLEVLDPEQNATF D YLG+PFDLSRVLF+ TAN  D IP  L DRMEV+E+PGYT E+KL+IAR +L+P+Q+   G+ A    +  AAL + +  YTREAG R LERQ+GALCRH A++                                                                                                                                    +A  DA                      ERV +    L  ILG PR E E A     PGV TGLAWT  GGELLF+E + V G GG  L LTGQLG+V                   MKESA  ALS ++S       +LG+ P     V D  S D+H+HVPAGA PKDGPSAG+AI  +L+SLL GR + P   VTGE+TLRGLVLPVGG+K+KVLAAH  G+  V+LP RNRRD E++P   R  L    V  + +A +
Sbjct:  173 PGTLAD-LAAGYLDLPPAEKQEILELVELKPRLRRVLEHVSHRIEVLRLTRRIQEQTKEKLDERQREYFLREQLRTIRRELGEE----------EDEDGELESLAEAVERAGMPAEVLEQARRELRRLRRTPEASAEHAMLRTWLEWLTELPWSRQSEET---------------------------------------------IDLARARAVLDEDHHDLDKVKRRILEYLAVRKL---NPEGKAPILCFVGPPGVGKTSLGRSIARALGRAFERMSLGGVHDEAEIRGHRRTYVGAMPGMVIQAIRKAGTRNPVLMLDEVDKLG-IGFHGDPAAALLEVLDPEQNATFQDHYLGVPFDLSRVLFICTANVLDQIPPPLRDRMEVIELPGYTEEDKLEIARRYLIPRQLEAAGLDAGRCRIDDAALRDLIRGYTREAGCRGLERQIGALCRHAAMR------------------------------------------------------------------------------------------------------------------------------------IAEGDA----------------------ERVEIGPADLAPILGPPRFENEAALRTSVPGVATGLAWTPTGGELLFIEATRVPGKGG--LILTGQLGDV-------------------MKESAQAALSLVKSR----AQALGIDP----AVFD--SADLHVHVPAGAIPKDGPSAGVAIFLALVSLLTGRRVRPDTAVTGEITLRGLVLPVGGIKEKVLAAHTAGIARVVLPARNRRDYEEIPEHARAGLELVWVENVDQALE 779          
BLAST of jgi.p|Trimin1|347800 vs. uniprot
Match: A0A2R5GJ38_9STRA (Lon protease homolog n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ38_9STRA)

HSP 1 Score: 511 bits (1315), Expect = 7.020e-159
Identity = 356/922 (38.61%), Postives = 483/922 (52.39%), Query Frame = 1
Query:   22 KGATQLDEGSVEDPQVQALAMNLAEAAAGLLAALQTRGGVSAAAASPELRSLSRAATASAATAPGAMADAIVSSLASVSAQQKQAVLEAADLVTRLTKALEVVNEQTQIVALSSKLKSSVDERLMSQQREYYLRQQLKAIREELGE-EGDGAXXXXXXXDDAAEVTELTARLEKARLPPAARAAADKELRRLRRMPPTQPERGVVATYLELMADLPWSALSPERVADLQAWRRRWRRLYRDAQAQGVRFSTRGGAGYPRLSVSDKYWEMVSLSLAREQLDADHHGLEPVKRRLIEYMAVRLLRGKDQESRGSILCLVGPPGVGKTSLGRSVAVALGRKFQRLSLGGVHDEASIRGHRRTYIGALPGLILQSLKRAQTRNPVLLLDEVDKMGKWGTGGDPAAALLEVLDPEQNATFVDSYLGLPFDLSRVLFVATANATDTIPEALLDRMEVLEVPGYTLEEKLKIAREHLLPKQMHECGVTAEHMEVMPAALSEAVSRYTREAGVRQLERQLGALCRHVALKASAAQGVKDRRGSAAPHDAGLSGAARCKSAAAAAAALQCCMRGLVAAELAPAGPSTAPVQRLSVALSADHAAHDDADGAAEPGAADFAAADPSLLEQLQGAAASAGGDATSAQQQGGVGLSVGPPESADDVAVAVADAXXXXXXXXXXXXXETETAALPFERVVVDVEALHAILGRPRHEREGAADFLAPGVCTGLAWTRAGGELLFVECSGVAGGGGGALTLTGQLGEVSAGLPQLLPLLLLLREGGVMKESATLALSWIRSNEASICTSLGLPPPRQAFV---LDPFSTDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRSIDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLEDLPADVRDALRFSCVSTLLEAFQVLF 2775
            K A + D GSV D +V+ALA+N+ E A  LL   + R           + +L RA+       PG +AD + ++L   S ++KQ VL   +L  RL + LE++N Q ++  +S K+++ V+ +L + QREYYLRQQL+AI EELG+  G G         +  E+  L   L   +LP   R  AD+EL+RL++M P+QPE  V+ +YLELMA+LPW  +S +                                              + +  AR QLDADHH LE VK R+IE++AVR L+    + +G ILCL GPPGVGKTSLG+SVA +LGR+F+RL+LGGV DEA IRGHRRTYIGALPG I+ +LK+A T NPV+LLDE+DK+G+    GDPA+ALLEVLDPEQN  FVD YL +P+DLS+VLF+ATAN  DTIP  LLDRMEV+E+PGYT  EK +IA +HL+PKQM   G+  +H+E  P+A+ + +  YTREAGVR L+R++ ALCRH A+K + +   +DRR S   H                               L+                                             EQL                                                     E++     F+ +++    +  +LG  ++E E A     PGV TGLAWT+ GGE+LF+E       G G + LTG+LGE                    M ES   ALS++R N       LGL   +   V         D+H+H PAG  PKDGPSAG+A+ +S+LS L GR +      TGE+TLRGLVLPVGG+K+KV+AAHR GL+ V+LP+RN +D+ ++P +VR  L    V  ++ A   LF
Sbjct:  168 KIAWKADIGSVNDTEVRALAINVREIAQDLLELQRKRNSPLGKKTKEVIDNLDRAS-------PGRLADLLAANL-DASVEEKQHVLAEQELAPRLRRTLELLNRQVEVFRMSDKIQNEVEGKLKNTQREYYLRQQLRAINEELGQMNGKGGAGS-----EQDEIEALEENLAGIKLPEEPRQVADRELQRLKQMQPSQPEYAVIRSYLELMAELPWGKVSKDN---------------------------------------------LDIGHARAQLDADHHALERVKNRIIEFLAVRSLKN---DMKGPILCLAGPPGVGKTSLGKSVAESLGRQFRRLALGGVRDEAEIRGHRRTYIGALPGNIITTLKKAGTENPVILLDEIDKLGR-DVRGDPASALLEVLDPEQNDKFVDHYLNVPYDLSKVLFIATANRLDTIPGPLLDRMEVIELPGYTQAEKHEIAIQHLIPKQMERHGIAKDHIEFTPSAVDKVIDSYTREAGVRSLDREIAALCRHAAVKVAQS---RDRRRS---HS------------------------------LSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQL------------------------------------------------LPLLLESD-----FKMILITPAVVEEVLGPAKYESEIAQRMAIPGVSTGLAWTQVGGEILFIESW--LHRGSGRVQLTGRLGET-------------------MSESVRAALSFVRGN----LHELGLDHLKDCDVDLQTAISKADLHVHFPAGGVPKDGPSAGVAVTASILSALSGRCVRADTACTGEITLRGLVLPVGGIKEKVIAAHRAGLKRVVLPKRNEKDVVEIPDEVRKGLEIVFVDNIVSAMAQLF 913          
BLAST of jgi.p|Trimin1|347800 vs. uniprot
Match: A0A0D2GI95_9DELT (Lon protease n=2 Tax=Dethiosulfatarculus sandiegensis TaxID=1429043 RepID=A0A0D2GI95_9DELT)

HSP 1 Score: 502 bits (1293), Expect = 3.500e-158
Identity = 330/844 (39.10%), Postives = 442/844 (52.37%), Query Frame = 1
Query:  211 PGAMADAIVSSLASVSAQQKQAVLEAADLVTRLTKALEVVNEQTQIVALSSKLKSSVDERLMSQQREYYLRQQLKAIREELGEEGDGAXXXXXXXDDAAEVTELTARLEKARLPPAARAAADKELRRLRRMPPTQPERGVVATYLELMADLPWSALSPERVADLQAWRRRWRRLYRDAQAQGVRFSTRGGAGYPRLSVSDKYWEMVSLSLAREQLDADHHGLEPVKRRLIEYMAVRLLRGKDQESRGSILCLVGPPGVGKTSLGRSVAVALGRKFQRLSLGGVHDEASIRGHRRTYIGALPGLILQSLKRAQTRNPVLLLDEVDKMGKWGTGGDPAAALLEVLDPEQNATFVDSYLGLPFDLSRVLFVATANATDTIPEALLDRMEVLEVPGYTLEEKLKIAREHLLPKQMHECGVTAEHMEVMPAALSEAVSRYTREAGVRQLERQLGALCRHVALKASAAQGVKDRRGSAAPHDAGLSGAARCKSAAAAAAALQCCMRGLVAAELAPAGPSTAPVQRLSVALSADHAAHDDADGAAEPGAADFAAADPSLLEQLQGAAASAGGDATSAQQQGGVGLSVGPPESADDVAVAVADAXXXXXXXXXXXXXETETAALPFERVVVDVEALHAILGRPRHEREGAADFLAPGVCTGLAWTRAGGELLFVECSGVAGGGGGALTLTGQLGEVSAGLPQLLPLLLLLREGGVMKESATLALSWIRSNEASICTSLGLPPPRQAFVLDPF---STDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRSIDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLEDLPADVRDALRF 2733
            PGA+ D +VS++ S+S +++Q VL A D+  RL    E VN + Q++ L SKL++ V E L   QREYYLRQQLKAI++ELGEE D         +  +EV E   RL++ +L   AR  AD+EL+RL  M P+  E  V+ TYL+ +A LPW   S ++                                             + +  AR  L+ADHHGLE VK+R++EY+AVR L   + + +G ILCL GPPGVGKTSLGRS+A A+GR+F R+SLGGV DEA IRGHRRTY+GALPG I+QSL+RA T NPV +LDEVDK+G     GDP +ALLEVLDPEQN +F D YL + FDLS+V+F+ATAN  DTIP  L DRME+L +PGYT  EKLKIA+ +L+P+Q  E G+T     +  AA+++ + RYTREAGVR LER++G++CR+ A                                                                                                                                      +A  +A                      ERV V V+ ++A+LG  +   + A     PGV TGLAWT  GG++LF+E S + G GG  L LTGQLG+V                   MKESA  A+S++R+N                  +DP      D+HIHVPAGA PKDGPSAG+ + ++L+SLL  RS+DP + +TGE+TLRG+VLPVGG+K+K+LAAHR G++ VILP++N RDL D+P  V++++ F
Sbjct:  174 PGALCD-MVSTILSMSPEERQGVLAALDVKERLHMIREFVNREIQVLELGSKLQNQVKEGLDKTQREYYLRQQLKAIQKELGEEAD---------ETQSEVEEFRRRLDEKKLTEQARQEADRELKRLANMHPSSSEYHVITTYLDWLASLPWEEYSEDQ---------------------------------------------LDIKNARAILEADHHGLEKVKKRILEYLAVRKL---NPDMKGPILCLAGPPGVGKTSLGRSIARAMGREFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQSLRRAGTANPVFMLDEVDKVGA-DFRGDPTSALLEVLDPEQNFSFSDHYLDVTFDLSKVMFIATANVLDTIPAPLRDRMEILHLPGYTANEKLKIAKRYLVPRQRKEHGLTGSDFSITDAAVTKVIERYTREAGVRNLEREIGSICRYAAR------------------------------------------------------------------------------------------------------------------------------------TIAEGEA----------------------ERVSVGVKKINAVLGPEKITPDTALRTSVPGVATGLAWTPTGGDILFIEASAMPGKGG--LVLTGQLGDV-------------------MKESALAAVSYVRANA-------------DLLKVDPDFHKENDLHIHVPAGAIPKDGPSAGVTMLTALVSLLTNRSVDPEMAMTGEITLRGMVLPVGGIKEKILAAHRAGIKKVILPKQNERDLADVPKAVKNSMEF 770          
BLAST of jgi.p|Trimin1|347800 vs. uniprot
Match: A0A507DWD9_9FUNG (Lon protease homolog 2, peroxisomal n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DWD9_9FUNG)

HSP 1 Score: 504 bits (1299), Expect = 3.960e-158
Identity = 337/864 (39.00%), Postives = 457/864 (52.89%), Query Frame = 1
Query:  205 TAPGAMADAIVSSLASVSAQQKQAVLEAADLVTRLTKALEVVNEQTQIVALSSKLKSSVDERLMSQQREYYLRQQLKAIREELGEEGDGAXXXXXXXDDAAEVTELTARLEKARLPPAARAAADKELRRLRRMPPTQPERGVVATYLELMADLPWSALSPERVADLQAWRRRWRRLYRDAQAQGVRFSTRGGAGYPRLSVSDKYWEMVSLSLAREQLDADHHGLEPVKRRLIEYMAVRLLRGKDQESRGSILCLVGPPGVGKTSLGRSVAVALGRKFQRLSLGGVHDEASIRGHRRTYIGALPGLILQSLKRAQTRNPVLLLDEVDKMGKWGTGGDPAAALLEVLDPEQNATFVDSYLGLPFDLSRVLFVATANATDTIPEALLDRMEVLEVPGYTLEEKLKIAREHLLPKQMHECGVTAEHMEVMPAALSEAVSRYTREAGVRQLERQLGALCRHVALKASAAQGVKDRRGSAAPHDAGLSGAARCKSAAAAAAALQCCMRGLVAAELAPAGPSTAPVQRLSVALSADHAAHDDADGAAEPGAADFAAADPSLLEQLQGAAASAGGDATSAQQQGGVGLSVGPPESADDVAVAVADAXXXXXXXXXXXXXETETAALPFERVVVDVEALHAILGRPRHEREGAADFLAPGVCTGLAWTRAG-GELLFVECSGVAGGGGGALTLTGQLGEVSAGLPQLLPLLLLLREGGVMKESATLALSWIRSNEASICTSLGLPPPRQAFVLDPFSTDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRSIDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLEDLPADVRDALRFSCVSTLLEAFQVLFTSADAA 2793
            T+PG +AD + +S+  +S  +K  +LE  D+ TR+T+ LE++  Q Q++ +S KL+S+V+ +L  +QRE++LRQQL AI++ELGEE DG         +  EV +L  R+  A+LP  A  AA +E+RRL+RM P+  E  VV TYLE +++LPW   S +                                             ++ ++ AR+QLD DH GLE VK R++EY+AVR L+   ++ +G ILC +GPPGVGKTSLG+S+A ALGRKF R+SLGGV DEA IRGHRRTYIGALPG I+Q L+R    NPV+LLDE+DK+G+  + GDP++ALLEVLDPEQN+TF D YL + FDLS VLFVATAN  DTIP  LLDRMEV+ +PGYT +EKL IA  HLLPKQ+   G++ E + +    L +  + YTREAGVR LER++GA+CR +A++ + A+   +R                                                                  DG                                                                                      V VE L  ILG  R++ E A     PGV TGLAWT +G G LLF+E + +A  G G L LTG+LG+V                   +KESA ++L+W+RSN       LGL     A VL+    D+HIH+PAGA PKDGPSAG+ I ++L+SL   +S+     +TGE+TLRG VLPVGG+K+KVLAAHRGG++ +I+P RN  DL ++PA+VR  + F    T+ E  +  F    A+
Sbjct:  215 TSPGQLAD-LFASMIDLSMDEKLQILETTDVKTRITRTLELLTRQIQVLKISQKLQSTVESKLGKKQREFFLRQQLDAIKKELGEEEDG---------EEDEVADLVTRIADAKLPEEASKAAGREIRRLKRMHPSMAEYQVVRTYLEWLSELPWEKQSED---------------------------------------------VMDIARARQQLDDDHFGLEKVKTRILEYLAVRKLK---KDLKGPILCFLGPPGVGKTSLGKSLANALGRKFHRISLGGVRDEAEIRGHRRTYIGALPGRIVQGLRRCGVNNPVILLDEIDKLGR-DSRGDPSSALLEVLDPEQNSTFTDHYLNVAFDLSNVLFVATANDGDTIPGPLLDRMEVIRIPGYTFDEKLHIAERHLLPKQIKGHGLSPEEIRIDENVLLKIATGYTREAGVRNLEREVGAVCRAMAVEYADAKEKNERF-----------------------------------------------------------------DGR-------------------------------------------------------------------------------------VTVERLEKILGPERYDDEVAERTSIPGVVTGLAWTASGAGGLLFIEATQMA--GRGVLLLTGKLGDV-------------------IKESAQISLTWVRSN----AMRLGLSKVANANVLE--GLDVHIHLPAGAIPKDGPSAGVTIVTALVSLFTHKSVRDHTAMTGEITLRGQVLPVGGIKEKVLAAHRGGIKRIIMPFRNANDLSEVPANVRSDIEFIFAKTVDEVLRAAFDDTTAS 842          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347800 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDR9_9STRA0.000e+0100.00Lon protease C-terminal proteolytic domain-contain... [more]
D8LGC2_ECTSI8.660e-19943.39Lon protease homolog n=1 Tax=Ectocarpus siliculosu... [more]
A0A4D9CQU2_9STRA5.120e-19544.30Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A836CGN9_9STRA5.250e-17395.30Reverse transcriptase domain-containing protein n=... [more]
A0A7S1CL80_9STRA7.700e-17143.42Lon protease homolog n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A2E6VX71_9DELT2.240e-16439.53Lon protease n=1 Tax=Myxococcales bacterium TaxID=... [more]
A0A3N1XZP2_9GAMM1.430e-16039.79Lon protease n=1 Tax=Inmirania thermothiophila Tax... [more]
A0A2R5GJ38_9STRA7.020e-15938.61Lon protease homolog n=1 Tax=Hondaea fermentalgian... [more]
A0A0D2GI95_9DELT3.500e-15839.10Lon protease n=2 Tax=Dethiosulfatarculus sandiegen... [more]
A0A507DWD9_9FUNG3.960e-15839.00Lon protease homolog 2, peroxisomal n=1 Tax=Powell... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_16contigContig_16:289820..303941 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347800|estExt_Genemark1.C_Ctg_160040
BRITEko00000,ko00001,ko01000,ko01002,ko03029
KEGG Pathwayko04112,map04112
KEGG koko:K01338,ko:K08675
EC3.4.21.53
GOsGO:0000002,GO:0002020,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006139,GO:0006259,GO:0006508,GO:0006605,GO:0006625,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007005,GO:0007031,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009791,GO:0009894,GO:0009987,GO:0010033,GO:0010467,GO:0010565,GO:0014070,GO:0015031,GO:0015833,GO:0015919,GO:0016043,GO:0016485,GO:0016558,GO:0016560,GO:0016787,GO:0017038,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0019899,GO:0022622,GO:0031323,GO:0031329,GO:0031907,GO:0031974,GO:0031998,GO:0032042,GO:0032501,GO:0032502,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0040007,GO:0042221,GO:0042579,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043574,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045184,GO:0046320,GO:0046483,GO:0046907,GO:0048364,GO:0048527,GO:0048528,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0050994,GO:0051179,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0055085,GO:0062012,GO:0065002,GO:0065007,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0090304,GO:0090696,GO:0099402,GO:0140096,GO:1901360,GO:1901564
Preferred nameLONP2
DescriptionATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0466@1|root,KOG2004@2759|Eukaryota
Evalue1.42e-199
Seed ortholog2880.D8LGC2
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-06_002640.1
TranscriptId348122
TrackFilteredModels1
ProteinId347800
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347800gene_2950Tribonema minus UTEX_B_3156 geneContig_16 289820..303941 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347800Trimin1|347800|estExt_Genemark1.C_Ctg_160040Tribonema minus UTEX_B_3156 polypeptideContig_16 289820..303941 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2950_1exon_2950_1Tribonema minus UTEX_B_3156 exonContig_16 289820..289858 +
exon_2950_2exon_2950_2Tribonema minus UTEX_B_3156 exonContig_16 290329..290355 +
exon_2950_3exon_2950_3Tribonema minus UTEX_B_3156 exonContig_16 290833..291039 +
exon_2950_4exon_2950_4Tribonema minus UTEX_B_3156 exonContig_16 291298..291369 +
exon_2950_5exon_2950_5Tribonema minus UTEX_B_3156 exonContig_16 291734..291850 +
exon_2950_6exon_2950_6Tribonema minus UTEX_B_3156 exonContig_16 292280..292506 +
exon_2950_7exon_2950_7Tribonema minus UTEX_B_3156 exonContig_16 292738..292872 +
exon_2950_8exon_2950_8Tribonema minus UTEX_B_3156 exonContig_16 292983..293046 +
exon_2950_9exon_2950_9Tribonema minus UTEX_B_3156 exonContig_16 293819..293911 +
exon_2950_10exon_2950_10Tribonema minus UTEX_B_3156 exonContig_16 294558..294607 +
exon_2950_11exon_2950_11Tribonema minus UTEX_B_3156 exonContig_16 295245..295341 +
exon_2950_12exon_2950_12Tribonema minus UTEX_B_3156 exonContig_16 296097..296201 +
exon_2950_13exon_2950_13Tribonema minus UTEX_B_3156 exonContig_16 297246..297452 +
exon_2950_14exon_2950_14Tribonema minus UTEX_B_3156 exonContig_16 297685..297840 +
exon_2950_15exon_2950_15Tribonema minus UTEX_B_3156 exonContig_16 297923..298074 +
exon_2950_16exon_2950_16Tribonema minus UTEX_B_3156 exonContig_16 298269..298293 +
exon_2950_17exon_2950_17Tribonema minus UTEX_B_3156 exonContig_16 298401..298625 +
exon_2950_18exon_2950_18Tribonema minus UTEX_B_3156 exonContig_16 299414..299743 +
exon_2950_19exon_2950_19Tribonema minus UTEX_B_3156 exonContig_16 300179..300271 +
exon_2950_20exon_2950_20Tribonema minus UTEX_B_3156 exonContig_16 300598..300804 +
exon_2950_21exon_2950_21Tribonema minus UTEX_B_3156 exonContig_16 301610..301858 +
exon_2950_22exon_2950_22Tribonema minus UTEX_B_3156 exonContig_16 303063..303941 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2950CDS_2950Tribonema minus UTEX_B_3156 CDSContig_16 289820..289858 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2950 ID=mRNA_2950|Name=jgi.p|Trimin1|347800|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3756bp|location=Sequence derived from alignment at Contig_16:289820..303941+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACGCCTCCGGTGACCAGAAAGGCGCCACGCAGCTGGATGAAGGGTC
TGTTGAGGACCCGCAGGTCCAGGCGCTCGCCATGAACCTCGCGGAGGCAG
CGGCGGGCCTGCTGGCGGCGCTGCAGACGCGCGGCGGTGTGAGCGCGGCG
GCGGCGTCGCCGGAGCTGCGCAGCCTCTCGCGTGCGGCGACGGCGTCAGC
GGCGACCGCGCCGGGCGCCATGGCGGACGCCATCGTGTCCAGCCTGGCCA
GCGTGTCGGCGCAGCAGAAGCAGGCAGTGCTGGAGGCAGCGGACCTCGTG
ACACGATTAACCAAGGCGCTGGAGGTCGTGAACGAGCAAACCCAGATCGT
GGCGCTGTCCAGCAAGCTCAAGAGCAGCGTGGACGAGCGGCTGATGAGCC
AGCAGCGCGAGTACTACCTGCGGCAGCAGCTCAAGGCGATCAGGGAGGAG
CTCGGTGAAGAGGGCGACGGCGCCGGCGGCGGTGGCGCGGGCGCGGACGA
CGCCGCGGAGGTCACGGAGCTCACCGCGCGGCTGGAGAAGGCACGGCTGC
CGCCGGCGGCGCGCGCCGCGGCGGACAAGGAGCTGCGGCGGCTGCGGCGC
ATGCCGCCGACGCAGCCGGAGCGCGGCGTCGTCGCTACGTACCTGGAGCT
TATGGCGGACCTGCCGTGGAGCGCGCTGAGCCCGGAGAGGGTCGCTGATC
TTCAAGCCTGGCGGCGGCGGTGGCGGCGACTGTACCGCGACGCGCAGGCC
CAGGGCGTCCGCTTCTCCACGAGGGGCGGCGCCGGTTACCCACGTCTGTC
AGTTTCTGACAAGTACTGGGAGATGGTGAGCCTGAGCCTGGCACGGGAGC
AGTTGGACGCCGACCACCACGGCCTGGAGCCGGTAAAGAGGCGCCTCATA
GAGTACATGGCGGTGCGGCTGCTGCGCGGCAAGGACCAGGAGTCCAGGGG
GTCCATCCTCTGCCTCGTGGGCCCGCCGGGGGTGGGCAAGACCAGCCTTG
GCCGCTCCGTTGCCGTCGCACTGGGCAGAAAGTTTCAGCGGCTGTCGCTG
GGCGGCGTGCACGACGAGGCGTCCATACGCGGCCACCGCCGCACGTACAT
TGGCGCGCTCCCGGGGCTCATCCTGCAGTCGCTGAAGCGCGCGCAGACGC
GCAACCCCGTGCTGCTGCTGGACGAGGTGGACAAGATGGGCAAGTGGGGG
ACAGGGGGCGACCCCGCCGCCGCGCTCTTAGAGGTGCTGGACCCCGAGCA
GAATGCGACGTTCGTGGACAGCTACCTGGGGCTCCCCTTCGACCTGTCGC
GCGTACTCTTTGTCGCGACCGCCAACGCCACTGACACCATCCCCGAGGCA
CTGCTCGACCGCATGGAGGTGCTCGAGGTGCCGGGGTACACGCTGGAGGA
GAAGTTGAAGATCGCGCGCGAGCACCTGCTGCCCAAGCAGATGCACGAGT
GCGGCGTCACCGCCGAGCACATGGAGGTGATGCCCGCCGCGCTGTCGGAG
GCGGTGTCACGCTACACACGCGAGGCCGGCGTGCGGCAGCTGGAGCGCCA
GCTCGGCGCACTGTGCCGGCACGTCGCGCTCAAGGCGAGTGCCGCCCAAG
GGGTCAAGGACAGGCGGGGCTCAGCGGCACCGCACGATGCGGGGCTCAGC
GGCGCCGCACGATGCAAGTCCGCAGCGGCGGCGGCGGCGGCGCTGCAGTG
CTGCATGAGAGGCCTCGTTGCGGCAGAGCTGGCACCTGCAGGCCCCAGCA
CCGCGCCGGTGCAGCGCCTGAGCGTGGCGCTCTCCGCGGACCACGCCGCG
CACGACGACGCCGACGGCGCCGCGGAACCAGGCGCTGCCGACTTCGCGGC
AGCGGACCCGTCGCTGCTGGAGCAGCTGCAGGGCGCGGCCGCGTCCGCAG
GCGGCGACGCCACCAGCGCTCAGCAGCAGGGCGGCGTGGGGCTCAGCGTG
GGCCCGCCGGAGAGCGCGGACGACGTCGCAGTGGCTGTCGCCGATGCGGC
GCCGCCCGCCGCCGCCGCAGCAGTGGCAGCAGCTGCGGAGACGGAGACAG
CAGCGCTCCCCTTTGAGCGGGTCGTCGTCGACGTCGAGGCGCTGCACGCC
ATCCTCGGGCGCCCGCGCCACGAGCGCGAGGGCGCCGCCGACTTTCTAGC
GCCGGGCGTGTGCACGGGGCTCGCGTGGACGCGCGCAGGCGGCGAGCTGC
TCTTCGTCGAGTGCAGCGGCGTCGCCGGCGGCGGCGGCGGCGCGCTCACG
CTCACGGGCCAGCTCGGCGAGGTGAGCGCGGGACTGCCGCAGCTGCTGCC
GCTGCTGCTGCTGCTGCGCGAAGGCGGCGTGATGAAGGAGAGCGCCACGC
TCGCTTTGAGCTGGATTCGCAGCAACGAGGCCAGCATCTGCACGAGCCTC
GGCCTTCCTCCGCCGCGCCAGGCCTTCGTGCTGGACCCCTTCAGCACAGA
CATCCACATCCACGTGCCGGCTGGCGCGACGCCGAAAGACGGTCCCTCCG
CCGGCATCGCCATCGCCAGTTCGCTGCTGTCGCTCCTCATTGGCCGCAGC
ATCGATCCGACGGTGGGCGTCACCGGCGAGGTGACGCTGCGGGGGCTCGT
GCTGCCGGTGGGGGGCGTCAAGGACAAGGTCCTGGCGGCGCACCGCGGCG
GCCTGCGCCACGTCATCCTGCCGCAGCGCAACCGCCGTGACCTCGAGGAC
CTCCCCGCAGACGTGCGCGACGCGCTGCGCTTCAGCTGCGTCAGCACGCT
GCTCGAGGCGTTCCAGGTGCTGTTCACCAGCGCGGACGCGGCGGCGGCGG
CGGTGGCGCCGCCGCAGCAGCAGCAGCGGCGGCCGGAGAGCGCGCCGACG
GCGATGGCCGCGTCGGCGACGGCGGCGCAAACGGAGGCAGCGATCAACGC
CTACGTCCTACAGTGCATCAGCACACGGGCGGGGCTACAGCAGGCAGCGC
GTTTCCTTCAGCCCAAAACGGTGGCGATACCTGATGATGACTGCTTTGCC
GCCATGCAGTCCAAACACCCCCCTGCTGCGCCAGGGGAACAACTCCATGA
GCTATCCGGCATGGTTGATCAGCTTGTGGCGAAAGCAGCCGACATGCCAG
CAGAACTCAGCCTGTTACAGGGGGAGGGAATTGAGCCAGAGACGGTTGCC
AAGCTCATCCAGCGAGCAAGCCCTCACAGTGGAGCAGGCCCATCGGGGCT
GCGCTACAGCCACCTGCAGGATGCGCTACGCACAAGCTGGGGACGGCATG
AGTTTGCTGCTGTCCTCACACGGTGGCTTCAGGCCGTTATGCGGGAGGCT
GCGCGGCTGCCGGATGCCTTCTGGCAGTTGCATGGCGCGGGGCGCCTGAC
GCTACTTGCAGAACAACAGGAAGATGGTACAGCTAAGCAGCGGCCCATCG
TTTGCGGCGAGGTGCTGCAGCGACTATGCACTTCGGTGTACGTGGCAGAC
CGCAAAGACTTCCTGGCGGAGCTCCTTGAGCCAGACGGGCAGTATGGGGT
AGCCGTCTCAGCAGGAGCGGAGAAAGCGGCCATGGCCGGCAAACTCGCGT
ATGAGCTTGGTCACTGGCAGTTCATGCTGGACCTCAAGAATGCCTTCAAC
ATGGTGTTCGTCCTGGCGGCGGCGGAATGGGTAGCAGCACAGCTGCCGGA
CTTCCTCGACTACTTCATCGGCACATACGTTCGCACTCGGCCACGCCTGC
TGTTCCAGCACGTCGACGGCTCCACGCGCATCATCATGTCTCAGGCGCGG
GTTTAA
back to top

protein sequence of jgi.p|Trimin1|347800

>Trimin1|347800|estExt_Genemark1.C_Ctg_160040 ID=Trimin1|347800|estExt_Genemark1.C_Ctg_160040|Name=jgi.p|Trimin1|347800|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1252bp
MDASGDQKGATQLDEGSVEDPQVQALAMNLAEAAAGLLAALQTRGGVSAA
AASPELRSLSRAATASAATAPGAMADAIVSSLASVSAQQKQAVLEAADLV
TRLTKALEVVNEQTQIVALSSKLKSSVDERLMSQQREYYLRQQLKAIREE
LGEEGDGAGGGGAGADDAAEVTELTARLEKARLPPAARAAADKELRRLRR
MPPTQPERGVVATYLELMADLPWSALSPERVADLQAWRRRWRRLYRDAQA
QGVRFSTRGGAGYPRLSVSDKYWEMVSLSLAREQLDADHHGLEPVKRRLI
EYMAVRLLRGKDQESRGSILCLVGPPGVGKTSLGRSVAVALGRKFQRLSL
GGVHDEASIRGHRRTYIGALPGLILQSLKRAQTRNPVLLLDEVDKMGKWG
TGGDPAAALLEVLDPEQNATFVDSYLGLPFDLSRVLFVATANATDTIPEA
LLDRMEVLEVPGYTLEEKLKIAREHLLPKQMHECGVTAEHMEVMPAALSE
AVSRYTREAGVRQLERQLGALCRHVALKASAAQGVKDRRGSAAPHDAGLS
GAARCKSAAAAAAALQCCMRGLVAAELAPAGPSTAPVQRLSVALSADHAA
HDDADGAAEPGAADFAAADPSLLEQLQGAAASAGGDATSAQQQGGVGLSV
GPPESADDVAVAVADAAPPAAAAAVAAAAETETAALPFERVVVDVEALHA
ILGRPRHEREGAADFLAPGVCTGLAWTRAGGELLFVECSGVAGGGGGALT
LTGQLGEVSAGLPQLLPLLLLLREGGVMKESATLALSWIRSNEASICTSL
GLPPPRQAFVLDPFSTDIHIHVPAGATPKDGPSAGIAIASSLLSLLIGRS
IDPTVGVTGEVTLRGLVLPVGGVKDKVLAAHRGGLRHVILPQRNRRDLED
LPADVRDALRFSCVSTLLEAFQVLFTSADAAAAAVAPPQQQQRRPESAPT
AMAASATAAQTEAAINAYVLQCISTRAGLQQAARFLQPKTVAIPDDDCFA
AMQSKHPPAAPGEQLHELSGMVDQLVAKAADMPAELSLLQGEGIEPETVA
KLIQRASPHSGAGPSGLRYSHLQDALRTSWGRHEFAAVLTRWLQAVMREA
ARLPDAFWQLHGAGRLTLLAEQQEDGTAKQRPIVCGEVLQRLCTSVYVAD
RKDFLAELLEPDGQYGVAVSAGAEKAAMAGKLAYELGHWQFMLDLKNAFN
MVFVLAAAEWVAAQLPDFLDYFIGTYVRTRPRLLFQHVDGSTRIIMSQAR
V*
back to top

mRNA from alignment at Contig_16:289820..303941+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2950 ID=mRNA_2950|Name=jgi.p|Trimin1|347800|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=14122bp|location=Sequence derived from alignment at Contig_16:289820..303941+ (Tribonema minus UTEX_B_3156 )
ATGGACGCCTCCGGTGACCAGAAAGGCGCCACGCAGCTGGTAAGAGGACC GCTTGATAACATTTCTGCCCCCACGTCAGCGACATGCAACATTGATGATG GTGTGTTGCGATACAACATCGATGCTTGTTTTGTGTCTGTGTTGTTCTTT TTCAGCCGATGCTGCTGATCAGGGACAGGGTTCTGCTGCCGGGAGGGCTT CTACGCTTGTCGATCGGCAGACCAGCCTCCAGTCGCCTCGTTCACGCCCT GCTGGCCAACAGGAAGCAGCAATTTAAGCTGCCCATGGTCGCAGTATTCA TGCAGCAGAAGGACGCAGAGTCTGCTGCGTCGCCAGCTAGCGGCGTTTCT ATCGGCTGTGCTGCCAGGATCATTCAGCTTGTGGAAGCTGCTGAAGGAAG GCCCTATTCCATGTTGGTAAGAGGGGTGCAGCGGATCAGGGCGCTGCACA CACCTTCAGCATCCGGGGACGCTGGCGGGGTGCCGACGTGCCTTGCAGTG GCATTGCAGGATGAAGGGTCTGTTGAGGACCCGCAGGTGAGACGTCCATG TAGCTCAGATCAGAATGCCGCTGGCGCAATGTGTTGCAACAGCTTGTTGA AAGCGGGCAGCAGGGTGTTGCCGCAGCAGCAGTAGCCTGCCACTGCTGCT GCCATGGCTCACGCGGCTGTTTCTGCAGACACCTCATTACTGGTGAGCAA ATGGCAACAACATGTGGCTGCTAGCGACAACATCTGAGCCCACTACTGTG TCAGGACTTGCGTTGTCCTCATTAGTACACGTCTGTAGGCAGCGCACGCG ATGCCATCAGTGCCCACAGCCCGGCGCTTCTGTGAGTGGCAGCATTGTGG TGATTGATTTCACCTGCGCGCTGACAGGCAGAGCCACAGGGCTCCACATG CACCGAGTCATCAATGCATGCTGACTTCGTTCTTGGCTTGCTCTGCCACC AACATCAAGTGCTCACTCCGTCCCGCGTGCCTCAAGCAAACACTCCACGC CACGCATGTACAGGTCCAGGCGCTCGCCATGAACCTCGCGGAGGCAGCGG CGGGCCTGCTGGCGGCGCTGCAGACGCGCGGCGGTGTGAGCGCGGCGGCG GCGTCGCCGGAGCTGCGCAGCCTCTCGCGTGCGGCGACGGCGTCAGCGGC GACCGCGCCGGGCGCCATGGCGGACGCCATCGTGTCCAGCCTGGCCAGCG TGTCGGCGCAGCAGAAGCAGGTACCTGTTGTGGGAGCACACACGCGCGCG TGTGAGTTTGTGTTTGTGGATGTCTTGCGCATACGCGTACAGAAAGAGGA CGTGTGCAGGTCCCCTGCTGGTGAACAGGAATGCTGAAGAGACGGTACAA AGCTGATTCCGGATGTACAGCTGAAATGCGGTTGCGTGGCGCTCATGTGT GTCACAGCAACCCGTTTGCAGTCTGGAAATAGTTCACGTGATTGAGCGGC AGCGCTGCCATCTGCCCATCTCCTGCAGGCAGTGCTGGAGGCAGCGGACC TCGTGACACGATTAACCAAGGCGCTGGAGGTCGTGAACGAGCAAACCCAG GTACCTGCACACGATGTTGCCAAGCAGACAGCCTGCGCTTTCAATAAGAT GCGGTGTCAATGCTAGCTGCAGTTGCCGGTTGTGGTGTGGCATTAGTTTG TGATGGCGGTTGTCTGAATGGCAGGCTGGGCCTCACATGTCCTATGCTCC TATTCACCTGTTGTTAAACGCATCACTGCAGCCCCAATAACCAGCACAGC ACTCATCAGCCTCCACACAGGTTGACAGACGACCCTGCTGTCCCCATCAT CAGATGGCATTGCAGCGGTCATGACTGTTTGTCAACGCCTCAAATCAGCT CCCGAACCCAGTTCCTGCGCTCAAGCATCCCATGCGCGCCACGTTCTACT GTCCCTTTTGACAGATCGTGGCGCTGTCCAGCAAGCTCAAGAGCAGCGTG GACGAGCGGCTGATGAGCCAGCAGCGCGAGTACTACCTGCGGCAGCAGCT CAAGGCGATCAGGGAGGAGCTCGGTGAAGAGGTCAGCGGCTCAACCCACA TCAGTGGTTAATGGTAGAGTAGATGTTGAAGTTGACTAGAAGTGTATGTT GACGTAGGTGCGCTCTGAAATAACGCCCATGTAGATACAATTACGTTTTG TGTGCAGACTACCAGGCGCATGGTGCAGTGCGCAGTCACGGCGGATGAGG CAAGCAGGAGTGCTGGCGTTGACCATACCATCGCGCCAGCGGTGATGCGC GGCGGCGGCGTGGTCGCAAACGCCCAAGCCCTGGTGGCGCACTCGCGCAC GCCATGGCGCCAACAAATCGCGCCGACGCGCGCCTGCCTACAGGGTTGTA ACCCCTGTACAACGCAAGGCCGCTGCATCGGACGCGTTAAACTAGGCGCG CAACCGCTGTAAATGCTATCATGAACTAGACGCGTAACCGCTGCAACTGC CATCATGCAGGGCGACGGCGCCGGCGGCGGTGGCGCGGGCGCGGACGACG CCGCGGAGGTCACGGAGCTCACCGCGCGGCTGGAGAAGGCACGGCTGCCG CCGGCGGCGCGCGCCGCGGCGGACAAGGAGCTGCGGCGGCTGCGGCGCAT GCCGCCGACGCAGCCGGAGCGCGGCGTCGTCGCTACGTACCTGGAGCTTA TGGCGGACCTGCCGTGGAGCGCGCTGAGCCCGGAGAGGTGCGGGGTGGCT GCGGCTCGTATGTGAGGGGTGGTGGTGGCTGTTGCGTGGCAGAAGCGGGG AAAGGGGGGGGGGCAGGGGGGGGGAGGGAAGGGTCCCTTGTGTTCTCTTG AGGGTCCCGTGCGTGCTCTTAGGGGCGCTGTTTGACGCAGAGGCGACGCG AGCGCCGGCAGAGAGAGAGCAGTCGGATGAGCGGTAAGGTGCTGTGAGGC CCGCTCTTGGCGCACGAGGGTCGCTGATCTTCAAGCCTGGCGGCGGCGGT GGCGGCGACTGTACCGCGACGCGCAGGCCCAGGGCGTCCGCTTCTCCACG AGGGGCGGCGCCGGTTACCCACGTCTGTCAGTTTCTGACAAGTACTGGGA GATGTGCGCCACAGCAGACTTGCATTTCTTCTGATGAAGCCTCGTCGCGC TGAGGGTAGCGATGGCGATAACTTCAACTTCCGCCACACGCCATGCCCGT GCTTGTCGCACAGGGTGAGCCTGAGCCTGGCACGGGAGCAGTTGGACGCC GACCACCACGGCCTGGAGCCGGTAAAGGTGACTATGCATTAAGGCATACT TCAACATGATTTATTGAAGTTTTCATATTTCAACATAAGTTGTTGAAGTT GGCACACAGCATCAACATCAAGCACTTTGGAGTACATGCTTGTCAACTCC ACAAGGCGACAAGTCAAGCTGACAGGGGGGCTAGTCTTGAAGCAGTGCAT GGACAGTCTGCGACATAACTGAAGTGATTGTTTGGGCTGAGCATCATGGT GTGAGCGTGAGTGCGAGCGACTTATCCATGCATTTGCGACTGGCACCGGT AGCCTCTGCATAAAGATCGCAGGTGGCAAACTATGGCGCTGATCAAGCAA TTCTGGAGACCCTGCAACTTCAATCGCAGAACACCGCAAACTGAGGTAGT AAGTTGTTCATGGCCCTGTGCAGCAGCCATGCTGCATCACATGCCATGCT TGCTACCTCTTCTCCAACCAGCTGTCGTGCCAATCCTCCACTTCAACTTC AACTGTGGTATGCACACATGCGCCACCACTGCCCCCCTGTAGCAGCCATG CTCACTCACACTGCGGCTTGCTGCTCCCACTCCCTTCCAGGCCCGATGCA GAGGCGCCTCATAGAATACATGGCGGTGCGGCTGCTGCGCGGCAAGGACC AGGAGTCTCCCCCAAACAGCTGTCGTGCCAATGCCTTCACTTCAACTTGA ACTGCGGCAATCATGCTGCACAATGCGCCATCCCCTGGGCCCCCGTATCA GCCATGCTCGCTCACACTGCGGCTTGCTGCCCCCCTCCGCCCGCTGCAGA GGCGCCTCATAGAGTACATGGCGGTGCGGCTGCTGCGCGGCAAGGACCAG GAGTCCAGGGGGTCCATCCTCTGCCTCGTGGGCCCGCCGGGGGTGAGCCG CCGTGAGCACCATGATACCTGCCCACCCTCAATTCCTCATCCTCAAGGCC TGCTCTATGCGCGCACTCTGACATGGTGGACACGCCGCTACTGACATGGT GGCCGCTCTTACATGGTGGACACGCCGCTACTGTAGTCTTTGGCGCCGGC GATTTGTTTTTGCGATGAGCCGAAGTCGCGGCGCGCCAAAAGATGTGCGC TGTTGTGGCGTGGGCTCGGTCCTCTTGCGCTTTCTTTTTGCCACCCCGGC GATGCTCAGCGGCGTTGGGCGCAGTCTTCCTCCACATGTGTATGTAGCCT TCTTCCCTACTGTTTTGCCTGCAGCACGCCACTCGTCACACTGCCCGCCT GCGCCACAGACACGGCGCATCGAGCGCACACAGCAGAGGTGGGAGGACAC TGTTGCCCATCTTCATGTGCTGGGCGCTGCTGCACTGGCGCGCACCTTGA CGCCTCATTTTGCTGCACAGCAACTGACCCGCCTCTCGCTGTTTTGCTGC ATCGGCCATCGCCGCCCTTGGTGTTGCGCTGGCTGGTGGCGCCTTGATTG CATTGACGGCGGCGCAAGAATCGTGTTGCTGCTCATCCGGTCCATGTACT GAACATTGTCTCATTGCACGTGCTGATGGCTGGCGCAGGTGGGCAAGACC AGCCTTGGCCGCTCCGTTGCCGTCGCACTGGGCAGAAAGTGAGTGATCAA CATCGTCCATCAAGTGCTAGCCGTGGATTCGTGCGTTGCTGTCAGCAGTG TACCCGATGGCCGCTCTCACCCCTGTTATCCTGGGTCGGCGATTGCTCGG CGTCAGCGCACGCCCCATACGTCGTCACGCCATTGAACTGCTGCAGGGGA TTGGCGCACGTGACGCACATCCCAGCTTGCTCGCAGCGCATTCACAGTCG TGGCACAGGAGCTCTCGTGTCATCGCCACGAGCGTCCACAGGCAGTGCAG GAGTGCGTAACTGTACGCCGCGCCTCACATGCGGGAAGCACATATCTGTA GCTCCGCAGCAAATAACGTTCTGCGCCTCATGGCATGTCTCCGACGCAAG CGGTGCTTGCCTGTGCTGTCATGTCATCACTGCTCCCATCGCATGGATCT GGTCCTCCAGCTGAGCCGTGCAGCATGCTGTAGCTGGCGTTGCTGACGTT GCGCCAGTTCGCAAGCGCAAATGGCACGTCACCTCAACTCCGCGCGCTCG CGTCGATCTCACCTACGCCCACGCTGGCAACCGTCACACTGGAATCTCAA TGTAGGTACTCAGCAGAGACGCTCGGGCATGCAGGCCTCAACGCCACCGC CGCCCCCGCCCCCTTGTGGCTGCAGGTTTCAGCGGCTGTCGCTGGGCGGC GTGCACGACGAGGCGTCCATACGCGGCCACCGCCGCACGTACATTGGCGC GCTCCCGGGGCTCATCCTGCAGGTGCGTGCGCCTGCGCGCAGTGTGTGTG CAGTGGCGGGGTCTACAGCCGTACATCTGTGTGAGGCTGACTTTGTACTT CAACTGTCGCTGCGACGTGCTATGTGACACTTCCCCGTGTTCAGCACTTT GATGTATACACGAGATGTTACCGCATGTCAATGCATTGCGAGCTGCTTCT GCACGTGTCCAGCAGCACTCATCAACGCGTTGCTTGGCACTTGTGGCCAC CGTGCCCTTTGCTTCTTGCAACACGCGCCATCGTGGTGCTGGCCACACGT ACGTATACATGAATGCCGACTATACGAACACGCATGCTTGCTATGCTATC CACGCCCACCAGTTCTATCATCCTGAGCCTCTCCATCAGCACAACCATCA TGCCCTTCTGGCGCACCAACTCGACCGCAGTGGCAAGCCTGTCGTCACAA TGTCGACCAGCACCATGGGCGCTTGCTTTGATCGCCCCCGCCGCCACCCG CCACACCACGCGCCAACGCTCTCGGTACATGCCCCTGTCGCGCCCGCTGC TGCTGCTGCTGCTGGGCCTGGTGCAGTCGTTGAAGGGTGCGTGCAGACGC TCACCACGTTTTGCTTCACACTTAGGGCCCCCGAATTGACTAGCGGCGCT ACATGAGCACCCGCGCGCTTGCACCCGCCGCCGCTCGCTGAACCGCATGT GAACGCTATCTGTACCCCCGCCGCGCCGCTCTCTGCTGCTGCTGCTGCTG CTGCTGCTGCTGCTGCGACTCGTGCAGTCGCTGAAGCGCGCGCAGACGCG CAACCCCGTGCTGCTGCTGGACGAGGTGGACAAGATGGGCAAGTGGGGGA CAGGGGGCGACCCCGCCGCCGCGCTCTTAGAGGTACTCAATTGCTGCCCT CCTATTCTGGATGCATCTAAGTGAATGTGTGTGAGAGAGTGGGTGAGTGA GCGTCGGAGTGTGGGGGGGGGGGGTGGAAGGGGGGGGCAAGTGGGATACC GGCGGCGACCCGCGGCTGCGCTCGTGGAGGTACTATTGTTATTATACTAT CCCCTTCTCGATGCATCAATGTGTGTGTGTGTGTCTGCGCGTCTGTGTGT GGGACCTGAGTAAAGCATGCACACGCCACGAGAAGTGCCGCCGCCCTGAG GCCGCTTTCAGTGTGTGTGTTCGGGGCCTGATGAGAAAACGCAAGTGACG GAGGAAGAGCCTGGCGCTGTGAGTGGGGCTGCTGTCGATACGCGGCGTTC TCATTGGCCCGCGCGCTGCAGATGTATACTGGCGGTGCTGCTTAAGCGGC ATCCTCAATGGCCCGTGCGCTGCAGATGTATATTGGCAGTGCGGCTTGGA CAGACATGGTAGACTGCATTCCTTCGCGAAACCAGTCACATCGATCATGT CAGGAGGGTCTTATTTCAGGCAACACTTATCATGCTGCTTGGTGGCGATG ACTAGATCATGCACTGCGCGCCATACAAGGAAAGTCCATCGCAATCGTGA GTGTGGCTGCCAGTTGTTGCTCTTGGTGTTGACGAGCATGGGGGGCCAAT GGTACGCATGTGCTGCATCTCTGCAGCCATCCCAAGCGTGTCATTCGCTG CACATGATGGGAAGTCACGTGCTCATGGGCGTTTCTCAGCGTGCAACCTC TGTCACCTTGTGGTCGCACGGCAACACATCATCCCTCATATGCCGCTAGC GCCAGTCTGGCTGTCGCAGCTGCACAATGTACGACCTCCGCAGCTCGCCT GCGCCTTTGTCGGGCGCAGATGCACCGTACTGTGCAAACATGATGTCGAC CCCTGCGTGCCCACCTCTCATCGATGCACTGCCCATTACTGCCGTTGCTG AGCGCTGCTGACCGGCGAATATCAGAAGCTGCCACACGCCGCTCAACAAT GCCGTTTCCACCGTGTCATCGCTCAGGTGCTGGACCCCGAGCAGAATGCG ACGTTCGTGGACAGCTACCTGGGGCTCCCCTTCGACCTGTCGCGCGTACT CTTTGTCGCGACCGCCAACGCCACTGACACCATCCCCGAGGCACTGCTCG ACCGCATGGAGGTGCTCGAGGTGCCGGGGTACACGCTGGAGGAGAAGTTG AAGATCGCGCGCGAGCACCTGCTGCCCAAGCAGGTGAGTGACGCGCCGTC ACACGTGTAACTTCAAGTTCAAAGTCGACTGCGCGCGGTGGCAATGGGGA CGCGCAGCGCGCTTCTCATGCATGCCCGCCGATTTTGTGCTTGCCATGTA CTCATTGCACAGCTGACTGCTTTTTGATAGTGAAGCATCTGCCAACTCAC GCCGCTGCTGCCGCCGCTGCTACTGCGCCTCCTCGCCCCCCCCCCCCCTT CCCCCCCGCGCGCAGATGCACGAGTGCGGCGTCACCGCCGAGCACATGGA GGTGATGCCCGCCGCGCTGTCGGAGGCGGTGTCACGCTACACACGCGAGG CCGGCGTGCGGCAGCTGGAGCGCCAGCTCGGCGCACTGTGCCGGCACGTC GCGCTCAAGGCGAGTGCCGCCGTGCGCAAGCCCCCGCGCGACGCAACGGA CGCCAGGCATCACATTCGAATCTTTACTGTTAACGTTTGTTGTCCGTGCG CAGCAAGGGGTCAAGGACAGGCGGGGCTCAGCGGCACCGCACGATGCGGG GCTCAGCGGCGCCGCACGATGCAAGTCCGCAGCGGCGGCGGCGGCGGCGC TGCAGTGCTGCATGAGAGGCCTCGTTGCGGCAGAGCTGGCACCTGCAGGC CCCAGGTGGCACCGGGGCGGCGATTCTAGAGGACCATGCAATGCTTTCCT GGAATCCAGTGCTTGTAGCTCGATGCAGCGTGTGCGGAGCAGCAGCTGCC GGCGGCGCCGTGCCGCGCTGCACAATGCGCGCCCTGCCCCCGCCTACCAG TCAGCTGATCCGCGCACCCCCCCGTGCTGGCGTGCGCACCTTACGGCAGC ACCGCGCCGGTGCAGCGCCTGAGCGTCGGCACAGGTGCATCTACTGCAAT ATCTGCATCTCAACGCCACCCCTCATCCTCTGATCCTTTTGACAGCACCT GACCTTGCTCATGCATACTCCATCTGCGCAGGTGGCGCTCTCCGCGGACC ACGCCGCGCACGACGACGCCGACGGCGCCGCGGAACCAGGCGCTGCCGAC TTCGCGGCAGCGGACCCGTCGCTGCTGGAGCAGCTGCAGGGCGCGGCCGC GTCCGCAGGCGGCGACGCCACCAGCGCTCAGCAGCAGGGCGGCGTGGGGC TCAGCGTGGGCCCGCCGGAGAGCGCGGACGACGTCGCAGTGGCTGTCGCC GATGCGGTGAGCCAAGGGGTATGTATGTACGCTGCTGCAGTTGTCATTGC GCGGCGCGTGTGTGGAACTGTAGGCCTCTAGCGCGGGCGACAAGATTGCG CAGCAGCGTGGTGGTGTACCAGGCGCTTGGAGCGTGTTCGGCCTCGCGGC ATGTGGGTGTGGTGGCGGGAATGCTGTGGTTTTGGTGGGTGCTCAGGGGG GCAGTCAGACTTGCGGTGAACGCACCGGAGAACTACGGGCTCTCCAGGGC TACTGTGCGGCCGTCCCCTGATGCACCGACCCCATGATGACAAGTGATCA GGGGGTGTGAGTTGCGGGTCTTGCGCTCGGAAGTATTTGTGGTTCCGTTG GTGCCTCGGTGTGCCACATTCTGTGCTCTTTGTGGGGTGCTGGCATGCGA CTGTTACAGCATGGACGGGCGCGCCTGCAGAGTTCGCTTGAGCCCGCTTG CGGTTGACGCTCCGGCAGCAGGGGATGCACCCCACTCATGCTCGGCAACG GCAGGATGGCTCTCCGCGTGCGTGCGGCACGTCACACGCACGCGACCTTG TGCATTAAACAACTTTGATACCCAAAGCCGAGCGGGCAGCACTCTCTGAG CAACAGAGATGGGGAGCACTTCATTGAACGCACCACGCTGCCACGCTTCG GCTGCATTGCGCTGCTTTCACTCTGCCATCAACACGCACTGCCGTTGCCG GCCCTCTACGCATCTCAGCGGCGCTCGCTGTCCTTGCCTGAAGCTGCAGT GTCACCGCCACCGCTCTCACCGCCACCGCTTGCTCCCCCTGCAGGCGCCG CCCGCCGCCGCCGCAGCAGTGGCAGCAGCTGCGGAGACGGAGACAGCAGC GCTCCCCTTTGAGCGGGTCGTCGTCGACGTCGAGGCGCTGCACGCCATCC TCGGGCGCCCGCGCCACGAGCGCGAGGGCGCCGCCGACTTTCTAGCGCCG GGCGTGTGCACGGGGCTCGCGTGGACGCGCGCAGGCGGCGAGCTGCTCTT CGTCGAGTGCAGCGGCGTCGCCGGCGGCGGCGGCGGCGCGCTCACGCTCA CGGGCCAGCTCGGCGAGGTGAGCGCGGGACTGCCGCAGCTGCTGCCGCTG CTGCTGCTGCTGCGCGAAGGCGGCGTGCGTGTGGCGCAGCGGCGGTGCCG GCGCCGGCACCACTCTGATGAGTGCAGAGGAGTCAAGACGAGGGGGGTTG GGGGGCCTAGCTAGTTCTGCGCACTCTGCGGTGGCATGGTAGCTCGTGCG TACAGCGCAGCGGTGCAGCGCTCAGCGCAGGTTACACAGCAGCGCGACTG CCTTGCAGGGCTGGGACGGTCATGCGCGTCGGCGGCGGCGCCGCATCAAG TGTGGCCAGGCCTCAGACTTGAGTTGCACGTCGAGGTTGGGGTTGGAGCC TGGGAGGTGAACGCTGCTGTGCAGCGGCATCACGGTGTGCGCAGCCGGGG CTGCGCCGCCCCTGGTACTTGGCATAAGTTTCGCATGCACATTGTGTGGC CGTGATGCGAGGATGTAAGCTGATATCTGCTGCGCATGTGTCTGCACGCA CACTGCCAGGTGATGAAGGAGAGCGCCACGCTCGCTTTGAGCTGGATTCG CAGCAACGAGGCCAGCATCTGCACGAGCCTCGGCCTTCCTCCGCCGCGCC AGGTGGGCAGTGGCCGCTTGCAGCGCATGCTGTCACCCGCAGCATTTCTT TCTTGCTTGCTTGATTCAGTATGTTCTCGTAGTTCACTGCAAAGCTCTGC ATGCGTTTCGAGCTTTGGCTGCATTCACGAGTATCGAGTCTATCAGTCCT GGTTTTCATGCGGCGTTCAACAAAATGTGCTCACCCAGACCTGCTCCCGC ATGCCTCCAATGCACCATATTGATTGGCAACTGCCCCCCCCCCCCCCCCC CCCCCTTTTGCATACCCCCCCTCATCTCTCCTGTGCCCGCCCCCCCCGCC CCCCACTTCCCTTTTCAAAATCCCTCAGGCCTTCGTGCTGGACCCCTTCA GCACAGACATCCACATCCACGTGCCGGCTGGCGCGACGCCGAAAGACGGT CCCTCCGCCGGCATCGCCATCGCCAGTTCGCTGCTGTCGCTCCTCATTGG CCGCAGCATCGATCCGACGGTGGGCGTCACCGGCGAGGTGACGCTGCGGG GGCTCGTGCTGCCGGTGGGGGGCGTCAAGGACAAGGTGAGTGCCGTTGGG GCGGGGGGGTGCTACTGTACTGTTTGTGGCTGACTGCGTTAGCATTAGGG GGGGGGGGGCGGGCGTAGGTCGGTGTCGGACTGAGCGCGGTTGGCATCGG CGATGGCTGTGAGGTGTCGGCGATGTGCTGCAGGTGCAGCGTGGTCACTG CATGACTCCGACAGGCAGCGTGAACTTGATACACATGATGACGCTGCACG GCCTCGTGCTGCCGTGGGGGGCGTCAAGGACAAGGTGAGCAGGGGAAGGA AGGGGGGGGAGGGGGGGGGGCTGATGGTGTTGGGTGGCCTGGTGGGCAGT GACGGTGGCGTGTGGTGAGCTGTCCATTGCGTGCTGTGTTCCGAGGACTA GATGGAAGGCATTTGCTCAATGGGCCATGCGCCAGGTAGCGATGAGCGTG GCGTAGACGTATGTGCGGAATCCACTGTCCACTGCTAGGGTGCGCCCTGC AGCATAAAACTGGAGGCCTCATCAATAGATTGCTGCGTCACCGCACCGCT GAAGTACCCATCGTTATGGCGTAGTATGCCTTGCGACATGCCAGAGGTGC GCCTCGCCGCAGAAAACTGTCGTTGCAGCGTATGGTGCTTCATCCTGCAT GTTGCAGGCCCTGGCAGGGCTCCACCACAGCCTGCTTTGAAGTACACAAG TCTTGTCTTGAGGTTCCGGAGGTGAACGTTACGATGCCCTCGTGCATCCC AGCAGCTCTGACTGCAAGTGCTGGGGCAGCACACGAATCGGCAGTGTGCT CAGCGTGTCCCTTATCCATGAAACTGTGCGGCGCGCGCAGGTCCTGGCGG CGCACCGCGGCGGCCTGCGCCACGTCATCCTGCCGCAGCGCAACCGCCGT GACCTCGAGGACCTCCCCGCAGACGTGCGCGACGCGCTGCGCTTCAGCTG CGTCAGCACGCTGCTCGAGGCGTTCCAGGTGCTGTTCACCAGCGCGGACG CGGCGGCGGCGGCGGTGGCGCCGCCGCAGCAGCAGCAGCGGCGGCCGGAG AGCGCGCCGACGGCGATGGCCGCGTCGGCGACGGCGGCGGTCGCGTGCGG TCCTGTGCTGGACAGCTTCTTGTAGTCAAAGGGCCTCAGGTATCAAGGAG GGGGGGGGGGGGGGGGGTGAGGAAGGGGCGACGATTGGCAGTAGTAGATT GCATATGCGCGCATGTGTGCGCTGGTCATAGAGGTGGTTGCGGTAACAGT AGCGGGCGTGGAGAGGCGTGGACCTCAGCTAAGTAAATGGCAGATAGTCG CAGCGCACGCCGCATGCGGTCAGGCCGCCATCAGCGGCTGGTTCCCTTTG TGCAGATCTCAGATAATACAGCGCACAACTGATTAGCTTTGCCATTGGAC TTCACTACACAACAGTTAATGCACGCCTGCACACCAACACTTGCCAGTGC CATCATCGTCTTGTGTGTCTCAAAGCCTGCGTTTCATTGCCCTCTGCTGC GCCACTGCTGAGCATGATCTCATGTCCACATGGCCTCTCGCAGTGAGCGG TATCAGCATTGCTTCATCGGATTTGAATGCACACAGAAGAGCTTGTTGGC AAGGTTAAACCTCCCTGCTGTTCGTCAACACACTTCATACAGGCCAGCTG CGCCAGCTTCTTTGTCCACGCATGATCAGAACTGCTTGCTTGCCGCTGCC TCAGAATGCCTGGCTGCTGCACCTTCTCCAAGGTCTTTGCAGAGCAAATG TGCGACGGACTTAGTGCGATGTTGTTCTGCAGAGCAGCCTGCTGCCTGTG TGCGCATCAGCATGCAGCGCATTGGCGTGCATGTTTGCGTGACCTCTGCC GCAGCTATTTGAACATGACAGGGAACTGGCGTCGCGGATGCCCTGAACGG CGAACGCCTGCTCGAAAGCAGACCATTGGCGCAGACCACCGAACCAAGTC TTAGCGCTACTCACATTGCAAGTGTTGGCGCGTCGTACATTTGCAGGGGG GGGGGGGGGTTACTGTGGAGTGACGCGCCTGACGACTCCTGGTGAAGACC CCCTTGGTTGAACTGAGAGGCAGGAGCACTCAACAGCAAGCAAACCACAG ACGGCAGGGGGCTCCGCATGCAGTACATGCGTCAAGCAGTATCCTGAAGT TGATGGCGTTAGCTGCTAGTACACATGCACCTGGCATCACTCGCTCCGAC AGAATCAGAATGTTGGCACGCGGTGAGCTTGACCGGTTGGTGCCAGCGCT CCTCGCACACGCGCGTGCGCACCGGCGCTGGCGCGCGCGCCAGCAAACGG AGGCAGCGATCAACGCCTACGTCCTACAGTGCATCAGCACACGGGCGGGG CTACAGCAGGCAGCGCGTTTCCTTCAGCCCAAAACGGTGGCGATACCTGA TGATGACTGCTTTGCCGCCATGCAGTCCAAACACCCCCCTGCTGCGCCAG GGGAACAACTCCATGAGCTATCCGGCATGGTTGATCAGCTTGTGGCGAAA GCAGCCGACATGCCAGCAGAACTCAGCCTGTTACAGGGGGAGGGAATTGA GCCAGAGACGGTTGCCAAGCTCATCCAGCGAGCAAGCCCTCACAGTGGAG CAGGCCCATCGGGGCTGCGCTACAGCCACCTGCAGGATGCGCTACGCACA AGCTGGGGACGGCATGAGTTTGCTGCTGTCCTCACACGGTGGCTTCAGGC CGTTATGCGGGAGGCTGCGCGGCTGCCGGATGCCTTCTGGCAGTTGCATG GCGCGGGGCGCCTGACGCTACTTGCAGAACAACAGGAAGATGGTACAGCT AAGCAGCGGCCCATCGTTTGCGGCGAGGTGCTGCAGCGACTATGCACTTC GGTGTACGTGGCAGACCGCAAAGACTTCCTGGCGGAGCTCCTTGAGCCAG ACGGGCAGTATGGGGTAGCCGTCTCAGCAGGAGCGGAGAAAGCGGCCATG GCCGGCAAACTCGCGTATGAGCTTGGTCACTGGCAGTTCATGCTGGACCT CAAGAATGCCTTCAACATGGTGTTCGTCCTGGCGGCGGCGGAATGGGTAG CAGCACAGCTGCCGGACTTCCTCGACTACTTCATCGGCACATACGTTCGC ACTCGGCCACGCCTGCTGTTCCAGCACGTCGACGGCTCCACGCGCATCAT CATGTCTCAGGCGCGGGTTTAA
back to top

Coding sequence (CDS) from alignment at Contig_16:289820..303941+

>mRNA_2950 ID=mRNA_2950|Name=jgi.p|Trimin1|347800|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3756bp|location=Sequence derived from alignment at Contig_16:289820..303941+ (Tribonema minus UTEX_B_3156 )
ATGGACGCCTCCGGTGACCAGAAAGGCGCCACGCAGCTGGATGAAGGGTC
TGTTGAGGACCCGCAGGTCCAGGCGCTCGCCATGAACCTCGCGGAGGCAG
CGGCGGGCCTGCTGGCGGCGCTGCAGACGCGCGGCGGTGTGAGCGCGGCG
GCGGCGTCGCCGGAGCTGCGCAGCCTCTCGCGTGCGGCGACGGCGTCAGC
GGCGACCGCGCCGGGCGCCATGGCGGACGCCATCGTGTCCAGCCTGGCCA
GCGTGTCGGCGCAGCAGAAGCAGGCAGTGCTGGAGGCAGCGGACCTCGTG
ACACGATTAACCAAGGCGCTGGAGGTCGTGAACGAGCAAACCCAGATCGT
GGCGCTGTCCAGCAAGCTCAAGAGCAGCGTGGACGAGCGGCTGATGAGCC
AGCAGCGCGAGTACTACCTGCGGCAGCAGCTCAAGGCGATCAGGGAGGAG
CTCGGTGAAGAGGGCGACGGCGCCGGCGGCGGTGGCGCGGGCGCGGACGA
CGCCGCGGAGGTCACGGAGCTCACCGCGCGGCTGGAGAAGGCACGGCTGC
CGCCGGCGGCGCGCGCCGCGGCGGACAAGGAGCTGCGGCGGCTGCGGCGC
ATGCCGCCGACGCAGCCGGAGCGCGGCGTCGTCGCTACGTACCTGGAGCT
TATGGCGGACCTGCCGTGGAGCGCGCTGAGCCCGGAGAGGGTCGCTGATC
TTCAAGCCTGGCGGCGGCGGTGGCGGCGACTGTACCGCGACGCGCAGGCC
CAGGGCGTCCGCTTCTCCACGAGGGGCGGCGCCGGTTACCCACGTCTGTC
AGTTTCTGACAAGTACTGGGAGATGGTGAGCCTGAGCCTGGCACGGGAGC
AGTTGGACGCCGACCACCACGGCCTGGAGCCGGTAAAGAGGCGCCTCATA
GAGTACATGGCGGTGCGGCTGCTGCGCGGCAAGGACCAGGAGTCCAGGGG
GTCCATCCTCTGCCTCGTGGGCCCGCCGGGGGTGGGCAAGACCAGCCTTG
GCCGCTCCGTTGCCGTCGCACTGGGCAGAAAGTTTCAGCGGCTGTCGCTG
GGCGGCGTGCACGACGAGGCGTCCATACGCGGCCACCGCCGCACGTACAT
TGGCGCGCTCCCGGGGCTCATCCTGCAGTCGCTGAAGCGCGCGCAGACGC
GCAACCCCGTGCTGCTGCTGGACGAGGTGGACAAGATGGGCAAGTGGGGG
ACAGGGGGCGACCCCGCCGCCGCGCTCTTAGAGGTGCTGGACCCCGAGCA
GAATGCGACGTTCGTGGACAGCTACCTGGGGCTCCCCTTCGACCTGTCGC
GCGTACTCTTTGTCGCGACCGCCAACGCCACTGACACCATCCCCGAGGCA
CTGCTCGACCGCATGGAGGTGCTCGAGGTGCCGGGGTACACGCTGGAGGA
GAAGTTGAAGATCGCGCGCGAGCACCTGCTGCCCAAGCAGATGCACGAGT
GCGGCGTCACCGCCGAGCACATGGAGGTGATGCCCGCCGCGCTGTCGGAG
GCGGTGTCACGCTACACACGCGAGGCCGGCGTGCGGCAGCTGGAGCGCCA
GCTCGGCGCACTGTGCCGGCACGTCGCGCTCAAGGCGAGTGCCGCCCAAG
GGGTCAAGGACAGGCGGGGCTCAGCGGCACCGCACGATGCGGGGCTCAGC
GGCGCCGCACGATGCAAGTCCGCAGCGGCGGCGGCGGCGGCGCTGCAGTG
CTGCATGAGAGGCCTCGTTGCGGCAGAGCTGGCACCTGCAGGCCCCAGCA
CCGCGCCGGTGCAGCGCCTGAGCGTGGCGCTCTCCGCGGACCACGCCGCG
CACGACGACGCCGACGGCGCCGCGGAACCAGGCGCTGCCGACTTCGCGGC
AGCGGACCCGTCGCTGCTGGAGCAGCTGCAGGGCGCGGCCGCGTCCGCAG
GCGGCGACGCCACCAGCGCTCAGCAGCAGGGCGGCGTGGGGCTCAGCGTG
GGCCCGCCGGAGAGCGCGGACGACGTCGCAGTGGCTGTCGCCGATGCGGC
GCCGCCCGCCGCCGCCGCAGCAGTGGCAGCAGCTGCGGAGACGGAGACAG
CAGCGCTCCCCTTTGAGCGGGTCGTCGTCGACGTCGAGGCGCTGCACGCC
ATCCTCGGGCGCCCGCGCCACGAGCGCGAGGGCGCCGCCGACTTTCTAGC
GCCGGGCGTGTGCACGGGGCTCGCGTGGACGCGCGCAGGCGGCGAGCTGC
TCTTCGTCGAGTGCAGCGGCGTCGCCGGCGGCGGCGGCGGCGCGCTCACG
CTCACGGGCCAGCTCGGCGAGGTGAGCGCGGGACTGCCGCAGCTGCTGCC
GCTGCTGCTGCTGCTGCGCGAAGGCGGCGTGATGAAGGAGAGCGCCACGC
TCGCTTTGAGCTGGATTCGCAGCAACGAGGCCAGCATCTGCACGAGCCTC
GGCCTTCCTCCGCCGCGCCAGGCCTTCGTGCTGGACCCCTTCAGCACAGA
CATCCACATCCACGTGCCGGCTGGCGCGACGCCGAAAGACGGTCCCTCCG
CCGGCATCGCCATCGCCAGTTCGCTGCTGTCGCTCCTCATTGGCCGCAGC
ATCGATCCGACGGTGGGCGTCACCGGCGAGGTGACGCTGCGGGGGCTCGT
GCTGCCGGTGGGGGGCGTCAAGGACAAGGTCCTGGCGGCGCACCGCGGCG
GCCTGCGCCACGTCATCCTGCCGCAGCGCAACCGCCGTGACCTCGAGGAC
CTCCCCGCAGACGTGCGCGACGCGCTGCGCTTCAGCTGCGTCAGCACGCT
GCTCGAGGCGTTCCAGGTGCTGTTCACCAGCGCGGACGCGGCGGCGGCGG
CGGTGGCGCCGCCGCAGCAGCAGCAGCGGCGGCCGGAGAGCGCGCCGACG
GCGATGGCCGCGTCGGCGACGGCGGCGCAAACGGAGGCAGCGATCAACGC
CTACGTCCTACAGTGCATCAGCACACGGGCGGGGCTACAGCAGGCAGCGC
GTTTCCTTCAGCCCAAAACGGTGGCGATACCTGATGATGACTGCTTTGCC
GCCATGCAGTCCAAACACCCCCCTGCTGCGCCAGGGGAACAACTCCATGA
GCTATCCGGCATGGTTGATCAGCTTGTGGCGAAAGCAGCCGACATGCCAG
CAGAACTCAGCCTGTTACAGGGGGAGGGAATTGAGCCAGAGACGGTTGCC
AAGCTCATCCAGCGAGCAAGCCCTCACAGTGGAGCAGGCCCATCGGGGCT
GCGCTACAGCCACCTGCAGGATGCGCTACGCACAAGCTGGGGACGGCATG
AGTTTGCTGCTGTCCTCACACGGTGGCTTCAGGCCGTTATGCGGGAGGCT
GCGCGGCTGCCGGATGCCTTCTGGCAGTTGCATGGCGCGGGGCGCCTGAC
GCTACTTGCAGAACAACAGGAAGATGGTACAGCTAAGCAGCGGCCCATCG
TTTGCGGCGAGGTGCTGCAGCGACTATGCACTTCGGTGTACGTGGCAGAC
CGCAAAGACTTCCTGGCGGAGCTCCTTGAGCCAGACGGGCAGTATGGGGT
AGCCGTCTCAGCAGGAGCGGAGAAAGCGGCCATGGCCGGCAAACTCGCGT
ATGAGCTTGGTCACTGGCAGTTCATGCTGGACCTCAAGAATGCCTTCAAC
ATGGTGTTCGTCCTGGCGGCGGCGGAATGGGTAGCAGCACAGCTGCCGGA
CTTCCTCGACTACTTCATCGGCACATACGTTCGCACTCGGCCACGCCTGC
TGTTCCAGCACGTCGACGGCTCCACGCGCATCATCATGTCTCAGGCGCGG
GTTTAA
back to top