|
|
Homology
BLAST of jgi.p|Trimin1|347793 vs. uniprot
Match: A0A836CJJ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ1_9STRA) HSP 1 Score: 1105 bits (2859), Expect = 0.000e+0 Identity = 731/731 (100.00%), Postives = 731/731 (100.00%), Query Frame = 1
Query: 1 MAPQCKGWAPQQRASAAXXXXXXXXXXXXXXSLACSSCGHRAAAHPLQPGAPPGATVAPAAQLLRDAFASLRNARAAGDDATGEGGRWAGGWATPRVQQGVASAADVLHDGGSGAAAAIQRAQCLAASAQPLLLPLXXXXXXXXXXXXXXXXXXXPLLLALPEGAAATVMPQAGLALAAELDAVYWHLRYAAVTAPDASAGSSXXXXXXXXXXXXATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRALQASCGAACAPLLEHLKATMDLDLQGGGKGKATWLEMEVAAGYGQWSGGLPLTPSPYEGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAALRAYPRMSYTAYDKDPPPLPGARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYHGRAPAWSAVERGGTERAXXXXXXXXXXXXXXLFLCYPPPEGTMGIAPHGGCCAYRDRGAGGKRFLSTVXXXXXXXXXXXXXXXXXXXAIVKSPTPPRSHPVRAPTTQTADALRAFAGDTVIYAGERGGDTGTPALEAALSAAWAPAAPPVELPAFPNTAACLMVFRRXXXXXXXXXXXXXXXXXAGVVRAFAAAPAAXXXXXXXXXXXXXSCAVCKATGQGLRRCRRTRAACYCSEACRKTDETRLQVLQLVRHVRAPAGVAVGGSGGAPFNDKKRFAPLSRA 2193
MAPQCKGWAPQQRASAAXXXXXXXXXXXXXXSLACSSCGHRAAAHPLQPGAPPGATVAPAAQLLRDAFASLRNARAAGDDATGEGGRWAGGWATPRVQQGVASAADVLHDGGSGAAAAIQRAQCLAASAQPLLLPLXXXXXXXXXXXXXXXXXXXPLLLALPEGAAATVMPQAGLALAAELDAVYWHLRYAAVTAPDASAGSSXXXXXXXXXXXXATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRALQASCGAACAPLLEHLKATMDLDLQGGGKGKATWLEMEVAAGYGQWSGGLPLTPSPYEGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAALRAYPRMSYTAYDKDPPPLPGARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYHGRAPAWSAVERGGTERAXXXXXXXXXXXXXXLFLCYPPPEGTMGIAPHGGCCAYRDRGAGGKRFLSTVXXXXXXXXXXXXXXXXXXXAIVKSPTPPRSHPVRAPTTQTADALRAFAGDTVIYAGERGGDTGTPALEAALSAAWAPAAPPVELPAFPNTAACLMVFRRXXXXXXXXXXXXXXXXXAGVVRAFAAAPAAXXXXXXXXXXXXXSCAVCKATGQGLRRCRRTRAACYCSEACRKTDETRLQVLQLVRHVRAPAGVAVGGSGGAPFNDKKRFAPLSRA
Sbjct: 1 MAPQCKGWAPQQRASAAXXXXXXXXXXXXXXSLACSSCGHRAAAHPLQPGAPPGATVAPAAQLLRDAFASLRNARAAGDDATGEGGRWAGGWATPRVQQGVASAADVLHDGGSGAAAAIQRAQCLAASAQPLLLPLXXXXXXXXXXXXXXXXXXXPLLLALPEGAAATVMPQAGLALAAELDAVYWHLRYAAVTAPDASAGSSXXXXXXXXXXXXATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRALQASCGAACAPLLEHLKATMDLDLQGGGKGKATWLEMEVAAGYGQWSGGLPLTPSPYEGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAALRAYPRMSYTAYDKDPPPLPGARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYHGRAPAWSAVERGGTERAXXXXXXXXXXXXXXLFLCYPPPEGTMGIAPHGGCCAYRDRGAGGKRFLSTVXXXXXXXXXXXXXXXXXXXAIVKSPTPPRSHPVRAPTTQTADALRAFAGDTVIYAGERGGDTGTPALEAALSAAWAPAAPPVELPAFPNTAACLMVFRRXXXXXXXXXXXXXXXXXAGVVRAFAAAPAAXXXXXXXXXXXXXSCAVCKATGQGLRRCRRTRAACYCSEACRKTDETRLQVLQLVRHVRAPAGVAVGGSGGAPFNDKKRFAPLSRA 731
BLAST of jgi.p|Trimin1|347793 vs. uniprot
Match: D7FW07_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW07_ECTSI) HSP 1 Score: 145 bits (365), Expect = 1.460e-32 Identity = 202/649 (31.12%), Postives = 243/649 (37.44%), Query Frame = 1
Query: 520 GLALAAELDAVYWHLRYAAVTAPDASAGSSXXXXXXXXXXXXATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRALQASCGAACAPLLEHL------------KATMDL---DLQGGGK-------------GKATWLEMEVAAGYGQWSGGLPLTPSPYEGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAA-----------------------------------------LRAYPRMSYTAYDKDPPPLPGARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYHGRAPAWSAVERGGTERAXXXXXXXXXXXXXXLFLCYPPPEGTMGIAPHGGCCAYRDRGAGGKRFLSTVXXXXXXXXXXXXXXXXXXXAIVKSPTPPRSHPVRAPTTQTADALRAFAGDTVIYAGERGGDTGTPALEAALSAAWAPAAPPVELPAFPNTAACLMVFRRXXXXXXXXXXXXXXXXXAGVVRAFAAAPAAXXXXXXXXXXXXXS--------------CAVC--KATGQG---LRRCRRTRAACYCSEACRKTDETRLQVLQLVRHVRAPAGVAV-----GGSGGAPFNDKKRFAPLS 2187
G +A+ELD YWH RY A + DA + A T S + +VPPPEVYF L+ H+ +V + R + A +L + AT L GGG+ ++ WLE V A W P EGTMRGSDP LP +R RCD+ RDW+ARL AFAVPN AL R A GG S +VEVGAGLGYWKW + P + + A DKDP +PG XXXXXXXXXXXXXXXXXX GR RGG +R E HGG A+ GG L + ++ P P A ADAL F+G ++Y GE GGDTG+P EAAL A W VELP F +TA LMVF R +G R A A AA C+ C KA +G L RCR TR+ +CSE C D R + RHV G AV G G F DKK F L+
Sbjct: 49 GTGIASELDLAYWHARYTAASRFDAGGVA-------------ADTESSSHQVVPPPEVYFVGLAFHVPAVTEVRASAVLDNNPALRRVLVDVFDLPVGDAGAQRHATRSLPPSSSSGGGEIRFPVLENPLLAVAQSAWLETAVCASAKSWVPHFPPRFGDNEGTMRGSDPGLPPPIRLRCDATRDWSARLFAFAVPNRRALDACKRALDACGVGGXXXXXX-------XSGGIVEVGAGLGYWKWVLEGLGPFPNGRGXXXXXXXXXXTSRGVSLHLGKAGRTLSGGDAKEAPPLKFLAIDKDPSRVPGGTG------VSAASXXXXXXXXXXXXXXXXXXXXXGR--------RGGNKRTRREGSRGGRHGEGQS-------ERPTHNEYHGGAPAWAVVEQGGPEQLRALSAAAYPVL------------LLCYPPPSVGVGTGASGCMGADALARFSGKVLLYIGEVGGDTGSPRFEAALRAGW-DLVEEVELPCFSSTANRLMVFARKGAFSSGGGVSASTAG-SGKKRKDAGAAAARLDTPGKDACPTGDAGGXXXXXGMAMYRCSGCGAKAAAEGGVLLHRCRLTRSVSFCSEKCLTLDAERWRANLEARHVHLAPGTAVELANQSGKFGGVFRDKKLFKRLA 642
BLAST of jgi.p|Trimin1|347793 vs. uniprot
Match: A0A0L0G853_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G853_9EUKA) HSP 1 Score: 126 bits (316), Expect = 2.840e-26 Identity = 108/353 (30.59%), Postives = 139/353 (39.38%), Query Frame = 1
Query: 520 GLALAAELDAVYWHLRYAAVTAPDASAGSSXXXXXXXXXXXXATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRALQASCGAACAPLLEHLKATMDLD--------------------LQGGGKGKATWLEMEVAAGYGQWSGGLPLTPSPY-EGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKW-------AALRAYPRMSYTAYDKDPPPLPGARAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYHGRAPAWSAVERGGTERAXXXXXXXXXXXXXX-----LFLCYPPPEGTMGI 1479
G+ +AAELD VYWH+ Y+A T G S ++PPPEVYFTCL+ H + + + + + L TMD+ LQG TW+EME+ A W G PL SP E TMRG DPLLP + RCDS+RDW+ARLMAFAVPN A V+++ +VEVGAG+GYWK + R Y A+DKDPP EYHG + AW+ V+ GG E + CYPPP G + +
Sbjct: 274 GVYVAAELDNVYWHILYSAQTNFHLLQGRSRLPA-----------------VIPPPEVYFTCLT-HTPPTKEMMETISIT-----PSIRKTLFDTMDMKFDAVTGEPAYCNTSNPLLAALQG------TWIEMEICAQSRSWVGNFPLQDSPNAEKTMRGPDPLLPQPISLRCDSVRDWSARLMAFAVPNTRAYDVLSKF-----------------------GTIVEVGAGVGYWKHYFDTSMASTQNDGTRTEYLAFDKDPP---------------SSAVDSQTRSKVPAAAKSTMNEYHGHSGAWATVQVGGPESISLSSQTKAVDTGAQSKNIAVLSCYPPPYGNLAL 559
BLAST of jgi.p|Trimin1|347793 vs. uniprot
Match: A0A7S3HGH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGH7_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 7.460e-6 Identity = 38/103 (36.89%), Postives = 48/103 (46.60%), Query Frame = 1
Query: 925 TMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIARVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAALRAYPRM--SYTAYDKDPP 1227
TM+G+DPLLP ++R D R W L +FA P AL +A + A LVE+GAG GYW +R + S AYDKDPP
Sbjct: 44 TMKGTDPLLPAVLRQWNDGCRIWPCHLYSFATPTVPALETLASL-----------------------APLVEIGAGTGYWAHM-VRTFTSTPESIIAYDKDPP 122
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | Trimin1|347793|estExt_Genemark1.C_Ctg_160031 |
| Max annot lvl | 2759|Eukaryota |
| EggNOG OGs | 29H2K@1|root,2RQ99@2759|Eukaryota |
| Evalue | 3.13e-39 |
| Seed ortholog | 2880.D7FW07 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-01_002890.1 |
| TranscriptId | 348115 |
| Track | FilteredModels1 |
| ProteinId | 347793 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2943 ID=mRNA_2943|Name=jgi.p|Trimin1|347793|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2318bp|location=Sequence derived from alignment at Contig_16:228874..237946+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGGCGCCACAGTGTAAGGGCTGGGCGCCGCAGCAGCGCGCCAGCGCTGC CGCCAGGGGTGGCAGCGGCAGCACCAGTAGCAGCGGCGGCAGCAGCCTGG CGTGCAGCAGCTGCGGGCACCGAGCTGCGGCGCACCCGCTGCAGCCTGGC GCGCCTCCAGGCGCGACAGTTGCGCCCGCTGCGCAGCTCTTGAGGGACGC GTTCGCGTCGCTGAGGAATGCGCGCGCCGCGGGCGATGACGCAACGGGGG AGGGGGGACGCTGGGCAGGGGGCTGGGCGACCCCGCGCGTGCAGCAGGGT GTTGCCTCTGCAGCAGATGTGCTTCATGATGGAGGCAGCGGCGCGGCTGC GGCGATACAGCGCGCACAGTGTCTGGCTGCTTCGGCTCAGCCGCTGCTGC TGCCGCTGCCGCCGCTGCTACTGCTGCGGCGGCAGCGGCGGCTGCTGCTG CTGCTGCTGCTGCTACCACTGCTGTTGGCGCTGCCTGAGGGCGCCGCCGC CACTGTGATGCCGCAGGCGGGACTGGCGCTGGCGGCGGAGCTGGATGCTG TGTACTGGCATCTGCGCTATGCGGCGGTCACTGCGCCAGACGCCAGCGCC GGCAGCAGCGGCAGCGGCAGCGGCGGCGGCGGCAGCGGCGGCGGCGCGAC TACCGCCAGCTGCAACGCGCACATCGTGCCGCCCCCGGAGGTCTACTTCA CGTGTCTGAGCGGCCACATGTGCAGCGTTGCTCAGGCGCGCCGCGCGCTG CAAGCTTCGTGCGGCGCTGCGTGCGCGCCGCTGCTCGAGCACCTCAAGGC CACCATGGACCTGGATTTGCAGGGGGGGGGGAAGGGGAAGGCCACATGGC TGGAAATGGAGGTTGCCGCCGGTTACGGGCAGTGGTCGGGGGGGCTCCCC CTCACGCCGAGCCCCTACGAGGGCACCATGAGGGGGTCGGACCCCCTGCT ACCAGACATTGTGAGGACGCGCTGCGACAGCATCCGCGACTGGGCGGCGC GGTTGATGGCGTTTGCCGTGCCCAACGCCGCGGCGCTGCGGGTAATCGCG CGGGTCTGCGGCGCAGTCAGCGGCGGCGGCGATGGCAGCGCTCCTACCGG CAGCAGCAGCGGCGGAGGCAGAAGCGCGGCGCTCGTGGAGGTCGGCGCAG GGCTCGGCTACTGGAAGTGGGCGGCGCTGCGCGCATACCCGCGCATGTCT TACACGGCGTACGACAAGGATCCGCCGCCGCTGCCTGGCGCACGCGCGCC GCCGCCGGGCAGCCAGGGCGGCGGCAGCAGCAGGAAGGGCAAGGGCAAAA AGCAGCAGAACGCGTCAGCAGCAGCAGGCGGCAACGAGTACCACGGCAGA GCGCCTGCGTGGAGCGCTGTGGAGCGCGGCGGCACGGAGCGCGCAGGCGC CGCAGCGGCGCCGTCGCAGCAGCAGCAGCGCTCAGTACTGTTCCTGTGCT ACCCGCCGCCAGAGGGCACCATGGGCATAGCCCCGCACGGCGGGTGCTGC GCGTACCGCGACAGAGGCGCTGGAGGGAAACGGTTTCTGTCCACTGTGCC GCCGCCGTGCCGCGCTGCCGCCGCCGCCGCCGCTGCCGCCGCCGCTGCTC TTGCTGCCATTGTCAAGAGCCCAACCCCTCCGCGCTCACACCCGGTGCGC GCGCCAACTACACAAACTGCAGACGCGCTGCGCGCCTTCGCCGGCGACAC GGTGATCTACGCGGGCGAGCGCGGCGGCGACACGGGCACGCCCGCCTTGG AGGCAGCGCTCAGCGCCGCGTGGGCCCCTGCTGCGCCCCCCGTGGAGCTG CCCGCGTTCCCCAACACGGCGGCGTGCCTCATGGTGTTCAGGCGGCGCCG CGGCGGCAGCGGCGGCAGCGGCGGCGGCGGCGGCGGCGGTGGCGGCGCTG GTGTCGTCCGCGCTTTTGCCGCGGCGCCTGCAGCAGGCGGCAAGGGCGCA GGGGGAGGGGCAGGGGCGCTGTCATCGTGCGCAGTGTGCAAGGCGACAGG GCAGGGGCTGCGTCGATGCCGCCGCACCAGGGCTGCATGCTACTGTAGCG AGGCGTGCCGAAAGACGGACGAGACGCGGCTGCAGGTGCTGCAGCTGGTG CGGCACGTCAGGGCCCCTGCGGGAGTCGCCGTCGGCGGAAGCGGCGGCGC GCCGTTCAACGACAAGAAGCGCTTCGCTCCGCTCTCACGCGCGTGAGATG GGAGGCGGTGATCGCTCAGCAGCGCCATCAACTTCAACAACAAATTCAGC CCTCCCACGGAGAACAGTCGAGTTGACCTTGAGCTCTAGGCCATCAGGCG AGCTGCTGTATGAGGGGC back to topprotein sequence of jgi.p|Trimin1|347793 >Trimin1|347793|estExt_Genemark1.C_Ctg_160031 ID=Trimin1|347793|estExt_Genemark1.C_Ctg_160031|Name=jgi.p|Trimin1|347793|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=732bp
MAPQCKGWAPQQRASAAARGGSGSTSSSGGSSLACSSCGHRAAAHPLQPG APPGATVAPAAQLLRDAFASLRNARAAGDDATGEGGRWAGGWATPRVQQG VASAADVLHDGGSGAAAAIQRAQCLAASAQPLLLPLPPLLLLRRQRRLLL LLLLLPLLLALPEGAAATVMPQAGLALAAELDAVYWHLRYAAVTAPDASA GSSGSGSGGGGSGGGATTASCNAHIVPPPEVYFTCLSGHMCSVAQARRAL QASCGAACAPLLEHLKATMDLDLQGGGKGKATWLEMEVAAGYGQWSGGLP LTPSPYEGTMRGSDPLLPDIVRTRCDSIRDWAARLMAFAVPNAAALRVIA RVCGAVSGGGDGSAPTGSSSGGGRSAALVEVGAGLGYWKWAALRAYPRMS YTAYDKDPPPLPGARAPPPGSQGGGSSRKGKGKKQQNASAAAGGNEYHGR APAWSAVERGGTERAGAAAAPSQQQQRSVLFLCYPPPEGTMGIAPHGGCC AYRDRGAGGKRFLSTVPPPCRAAAAAAAAAAAALAAIVKSPTPPRSHPVR APTTQTADALRAFAGDTVIYAGERGGDTGTPALEAALSAAWAPAAPPVEL PAFPNTAACLMVFRRRRGGSGGSGGGGGGGGGAGVVRAFAAAPAAGGKGA GGGAGALSSCAVCKATGQGLRRCRRTRAACYCSEACRKTDETRLQVLQLV RHVRAPAGVAVGGSGGAPFNDKKRFAPLSRA* back to topmRNA from alignment at Contig_16:228874..237946+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2943 ID=mRNA_2943|Name=jgi.p|Trimin1|347793|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9073bp|location=Sequence derived from alignment at Contig_16:228874..237946+ (Tribonema minus UTEX_B_3156 ) ATGGCGCCACAGTGTAAGGGCTGGGCGCCGCAGCAGCGCGCCAGCGCTGC
CGCCAGGGGTGGCAGCGGCAGCACCAGTAGCAGCGGCGGCAGCAGCCTGG
CGTGCAGCAGCTGCGGGCACCGAGCTGCGGCGCACCCGCTGCAGCCTGGC
GCGCCTCCAGGCGCGACAGTTGCGCCCGCTGCGCAGCTCTTGAGGGACGC
GTTCGCGTCGCTGAGGAATGCGCGCGCCGCGGGCGATGACGCAACGGGGG
AGGGGGGACGCTGGGCAGGGGGCTGGGCGACCCCGCGCGTTCGAATGTGG
CTGGCACAGGCAAGCGAATTTCACGCACACTATATGTGCTGTCACATGTG
TTGTCATCTGTTCGGCAGAGGTGGCCGTGTTGCATCAGTACAGCGGTGGC
GGTGCTGTTGCAGCATCGCGCCTGGGCGGACCGCACTGCGGCGGCTTGGG
GTCGGGGCACTGCTGCCGCCGCCGTGTGCTGCAGCTGCTGCTGCGCATCA
TGCGGCTGAGCACACTGTGCACGGCGTCATAGTTCCCTATGCGGCAGCGC
ACACTGTGTCATGAAGCACTGCTGCTGGCAGTCATGTCATGTTGCTGCTG
GCATCATTAGGTGCGTGTGGTAATTGGCGGGGAGGGGGGGGGCGGGGGGG
GGGGGGGGGGGGTCCTACACATGCGTGCCTAGAAAGTCCACCACTGCAGC
GCACATGGCACAGGTGGCGTCAGCACTGGCTGTTCTAGACATATTTGTGA
AGAATCACTGTGTTTATGAACTTCTTTGCATGGCCGTATACAACGTAGTG
CCCTACTGTAGTTGTAGCACTTCTTTCAAGTACTGCAATATAAGAAGCAG
AAAAAAAATCCCCAAGTGTCAAGTTTGCAACTGCATCCCTCACCATAACG
CAAGCCCCAGTACTTCTCCAGGTATGGCATCGCTGACGGGCTGCCATTGA
GTCTCGTAACTGTCACGCTCACCGCACGCTGAGAGCTGTCTGTCGCGCAT
GTACAATTTGCCAGAACTGTATACCTAGCTTAAGCCGCTTAAGCGTGGGG
CTCGTCTTGCGCTGCTGCTGCCGCTGTCACACAGGTGCAGCAGGGTGTTG
CCTCTGCAGCAGATGTGCTTCATGATGGAGGCAGCGGCGCGGCTGCGGCG
ATACAGCGCGCACAGTGTCTGGCTGCTTCGGCTCAGGTACGCTGCCTTCT
CTGTTGCTGCCAGTGCTGTACTTCTATCAAAACAGAGGAAGGCTAATGTT
GGCAGAAGCTGCATTGGGGTGTGACGTGGGCGCTGCACGAGCTGGGTATT
GTCAAATGTCAAGGAGCATGTCCGTGCGGGTAGGTTCTGCAGCTGGCGCT
GCAGGTGCTGCACCACCAGCAACTGCTGCCGCCGTTGCTGCCGCTACCGC
CGGCGCTGTGCTGCTGCTGCCGCTACTGCCGCTGCTGATGCAGCCGCTGC
TGCTGCCGCTGCCGCCGCTGCTACTGCTGCGGCGGCAGCGGCGGCTGCTG
CTGCTGCTGCTGCTGCTACCACTGCTGTTGGCGCTGCCTGAGGTGCTGCA
TTGGTCTTGCCCTGCCGAGGCATGCTGCCGTCAGTGCTCCGACGCCATGG
CGCGATGCTGCAGCCGCGCTGCGCTCGCGCGTACTCCGATACCCAGCACC
CGCGACGTTGCTGCCAACGTCTGACGCTTGGTCTGGTGCTTGCAACTCTG
CTGCGATGTGCTGCTGGCAGGGCGCCGCCGCCACTGTGATGCCGCAGGCG
GGACTGGCGCTGGCGGCGGAGCTGGATGCTGTGTACTGGTGAGGCGCTGA
GCGTTGATGCCGACGCGCATCATCCAATGCTGATGACATGATGCACATGG
CGAGGGCTGATGTGGATCGCTGCATCGGGGCGCTGCCAGCCTGCCCTGCG
CAGGCAGGCCATGAAGAACTTCAGGTTACGATGGCGGCGGCGGCGGCGGC
GGCGACGGCGGCGGCGCGCCGCAGCACGTTGATGTGGCGTTTTACTTGCT
GCACTCCTACCGCAGGCGTCACGATATACGAGGCCTTCTGAGAATGCCAA
AGTCACGAACATTGCACTGCAGTTGGCTGGCAGGATGGCTGGTGATGATG
GCGCCGGCCCCCCGCATCGCGAGCCGCGCACTTCGGGTTAGGGCTAGGGT
TAGGGCTAGGGGTAGGGCTAAGTCCAGGCGAGGGCTTGCGCAGGCCCAGG
GACGTGCTCTCGCCGGCACACCTCAATTGTGCGTAGGGAGCTGCGTGCTT
TGAGAGGTGTACTTCAGAAGTGTAATGTGCGCCATGCGTGCAAATAATCA
GCCACCTGAGAAGTACTCAGCACACCAGAATCCAGACGAGAAAGATTTGA
TGTTCACTCAGCATGCGTGACTTCCCGGCGTCCACCAGGCATCTGCGCTA
TGCGGCGGTCACTGCGCCAGACGCCAGCGCCGGCAGCAGCGGCAGCGGCA
GCGGCGGCGGCGGCAGCGGCGGCGGCGCGACTACCGCCAGCTGCAACGCG
CACATCGTGCCGCCCCCGGAGGTCTACTTCACGTGTCTGAGCGGCCACAT
GTGCAGCGTTGCTCAGGCGCGCCGCGCGCTGCAAGGTGAGCGACTCGCGC
CCCGCTGTCGGCCGCGGCGCACTGCTGCTTGCTGTGAAGTTGTTATTTTT
TTGCGGAGCGCGACGCCTGTGCAAGCGGATGCTGGTGCCGTCTGGGCGCG
TTGCGCGCTCACGCATGGTGTTTGTGTACAATGAGCAACACAAGCAACAC
AGTGGCCTGCCCTGAGGTTTATTGACTCAAAATGAATGCAAGTAGGCATA
CTAGCATACCCCCTGATGCTGCCCTTCGGGCAGTGCATTGGGGGCTGGAC
GCTGAATTGTGATTTTGCATCAACGTACGGCACGCTCGCAAAGCAGAGAG
AGAGGGGCTGGGACAAGCCTTCGGCTCTGGGCAGATGATGCGGTCTGCTG
CCCTCGTGTGCACATTATCACCATCGCTTCCAACTCGTTGACATGCTGGC
TGCCGCGCCTTTGGGCTCGACCAACCGCCCTCCACTGTGCAGCTCAACAC
GCGTGTGGTGCAGCAGCACTCAACTACAAGCGCGTCGCACTCCCTGCTTT
TGTGCCTTCGCCGCAGCTTCGTGCGGCGCTGCGTGCGCGCCGCTGCTCGA
GCACCTCAAGGCCACCATGGACCTGGATTTGCAGGGGGGGGGGAAGGGGA
AGGTGGCGGCGACGCGGCTGAGCAAGATGCGCTTGAAGTTGGATTTCCGG
TGCACTCCAACCCCCTGCTGGCGGTTCTGCAGGCCACATGGCTGGAAATG
GAGGTAGGTACATGGAGCACGGTGCTGCCACGCTTTGCGGAGCATTGGCA
CGATACCTCTAAGATGATGTTCGCTGCCATATCTGTCAGTTGGACTGCCT
GTGCAAAAAGCTTGGTTGTTTGAGTATCGTGCGCGCAGCACGGCAGCGCG
CGTGCGCCGCTACGCATCCGCCATGTATGGCAGCACCCTCTGGCATTGTA
TGGCAGCACCCTCTGGCATTGAGCGCTGCTGCTTGTGCCGGCGCGCGTGT
GCCTGCCGGTCGCGGCCGCATACGGCCGGTGGTCAGGGGCGCAGAAACGG
CTGCGCGCAGCTGACGTTCTTGCAGTACCAGCAGCACAGCGTCTGTGCTG
CCGCTTCGTGTATGTCCTCAGACATGATCATAATGACATGGGTGCTGTGT
GCTGCCCCGGCGTGTTTCTGCAGGTTGCCGCCGGTTACGGGCAGTGGTCG
GGGGGGCTCCCCCTCACGCCGAGCCCCTACGAGGGCACCATGAGGGGGTC
GGACCCCCTGCTACCAGGTAATTACGGGTGGGCGGGCTGCGCGTGTCTGC
ACGTTTCCCTTGCAGACAGCGACGACAGGAAACTGCTGCCTTGAAGCGTC
CTCTCGTTCAGAAGTGGTGTGTGGCGGTGCCATGCACCTCAATGCTGAGC
ACTGCTGCTCCGCCACCACAGTGCGTTATCGAATCTTGCTGTTCCCGCCT
TCTGACGTTGTCAAAGGCGGTGTGCCTCCAGTGCATGTTTCCATGGTAGT
GGTTTTGCTCTTTTGTCCTGCTCCTGCGTAGCCACGCTCACCGGCGCGAT
GCCACGCGACCGACGGGGATGACATCACTCGCGGCAACGCATCGAGCAGC
ACACCGCTGCCGCTGCTGCAGCAGCTTTACTCATGGCGCATCGACAAAGT
CACTCGTTGCAGTCGGTGACCGCATGTTAAATCTATACAACGAGCGCTGA
CGCCACTCCTCCAGTGGCCATCATCAGTGCCGTGCCGCGAAGGGTCACCG
GTGGCCGTTGGCGAACAGCCGCCGCTCCGAACGCCGCGGCGCATACCGCG
CGCAAATGCACCCGTCCCGCGCGCGCTCTCCACCGATTGCGGCGCGCCGT
GCACTGTCGCCAAAATGGTCATCGAAACACGCGCTGCCGCCGCCGCCGCC
ACCGCTGCGCCGCAGACATTGTGAGGACGCGCTGCGACAGCATCCGCGAC
TGGGCGGCGCGGTTGATGGCGTTTGCCGTGCCCAACGCCGCGGCGCTGCG
GGTAATCGCGCGGGTCTGCGGCGCAGTCAGCGGCGGCGGCGATGGCAGCG
CTCCTACCGGGTGAGCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCT
TCTGCAAGGCCCGACTTTGCTTGCCAGGCATCCGTCTCATTGACCGTCCG
GAGTGTCAGGGTTGAAAGTAGAAAGCAGATTCGGGACTGTGTTGGGTGTA
GGGCTCGCTCTCTTGCTCACGATGCCATGAGCCGGAAGTTGCACACCAGT
GTGCCCCCCCTTGCGCCCCCGTGGCCCCTGTGCCTCACCAGCGCATGGAA
TGCCGTGCGTTGTCGCATGCATTTCGCTGCCGCCGCCTCACCAGCGCATG
GCATGGTGCGCGTCGTCATGCACTTCGCTGCTGCCGCCGCCGCAGCAGCA
GCAGCGGCGGAGGCAGAAGCGCGGCGCTCGTGGAGGTCGGCGCAGGGCTC
GGCTACTGGAAGTGGGCGGCGCTGCGCGCATACCCGCGCATGTCTTACAC
GGCGTACGACAAGGTGGGTCTGCGCGCATGCGTGTGTGTTGCAGCGCTCA
GCAATCGGCCTTGCTCGTGTGAATCGAGGCTGCGAGGCAGCTGTTTTGTG
TGCGCTTCGCGCGGCGACGCGCACGGCCAGGCGGAGCTGGTGACTGGGCA
AATAGCGCGGCTGCTGTCGCTGCACGCCGCTCTAAGGGTTAGGGTCAGAT
GGTATGTAGGTACGTGTGCACGCACAGGCGGTGTTCAGCGCATACCTCCA
GAAGGCGAGGCCCTGCGCCATTTCAACCAGAGTTGATGATGTAGCTTTGC
ATGGGTGCATGGTGGAGTTCGCCCAGCGCGCTCGGCAGCAGATGCGGACC
GCTCAAGCAACTATATACATGCGCGTCGCCGCGGTGAGATTGGATCGTGG
AAGACTCTGACTTGGACTCGTGCACGAGCGCTCTGTAGCGGGCCGCTGAG
CAGCGCCGTTTCTGCTATTACATCATGACGACAGCGCATGGTGAGTTTGC
AGGTTCTGACAGGCATCGGTTGTGGTACACCACTGTCGTGCGGATCACGC
CTTTGTGCACCCTCTCACTGCGACAAGCGCACTGCATCTCAAATCTACCC
CCACGCCTAGACGTGATGAGTTGTCGCGATGCGCGCCGCAGCTTGTGGAA
GCACGCGTGCTCAACCCTTGCTTCGATCGACTGGTGTCCAGCTACTTCTG
CTGCGGTCAAGCCTTGTCGCACTTGAACTTCAGACCAGCACTTCACCAAA
AGGGGTGTCAACCTCAATATTCCATCAACCTCAGTATTCCATGTGCTTGC
AGGATCCGCCGCCGCTGCCTGGCGCACGCGCGCCGCCGCCGGGCAGCCAG
GGCGGCGGCAGCAGCAGGAAGGGCAAGGGCAAAAAGCAGCAGAACGCGTC
AGCAGCAGCAGGTTTGTGAGCGTCGCGAATGCTCTATGCGCACTGGCGAG
TGGTCATTCAACTTCACAAAGTATGCTGTGTACCTAGACACACGTCCAAG
CAGGCTGCGAGGTGGTATGCTAGCAGCGGCGAGGGCAAGAAGCAGCACAG
CTCAGCAGCAAGTAGGTGAGCGCTGCTGCGAACCCTGCGGGCCGCGCTAT
GCGCCAGTTCAAGTTCAAGTGCGTCTGTTCCTCGACGCAGCCCAGAACAA
GCTGCGAGTGCAGTGGTGTTCTGGCAGCAGCAGTGCTCCGCATTCTCAAT
GCTCAGCGCGCGTGTGCGTGCGCAGGTTGTTGGAGCGCTGCGCGACGCGT
TGTTGAAGTGGCGCCCTTCACAGCAGTGACGCTCCATGCGCGATTGCAGG
CTCAGCTGTGCCCATTAGCGTCAGCAGCAGCAGCATACATCAGATGGTCA
TCGCCGTACCTCAGTGCTCAGCAGAGCAGCAGCGAGGCGCCCGGCCACGA
TCTTGTGTGGGGACGGAGCGTTTCAGCATCGCCCGCAGCTGCTTGCGTCA
AGCACGCTCACAGCTGACCACCATATCACCAGTTGTTTATGAAATGGCCC
AAACAGTGTGCGGCGCGTTTTAGCAAGCACAGTGTTCCACGCTCGCACTG
CCTGCCAGCTGACGTTTCACAGAGCCGCGCCACAAACAGCATTGAACGGC
TGAGCCCTCGGGCGCATCCCTTGTGTGTGCGTGCGCGCGAGCGCAGGCGG
CAACGAGTACCACGGCAGAGCGCCTGCGTGGAGCGCTGTGGAGCGCGGCG
GCACGGAGCGCGCAGGCGCCGCAGCGGCGCCGTCGCAGCAGCAGCAGCGC
TCAGTACTGTTCCTGTGCTACCCGCCGCCAGAGGGCACCATGGGCATAGG
TCAGTGTCGCATGCCCTGCGAATTCGGTTGTCAATGTGAAAGCGGCGTGT
GTTGAGTGCTTTGTGGGGGAGTCACCAGTTGAAGTGCAACTTTGGTCGCT
GTGCAGCAGCAGGCCAGCCCTTGGCTGCGGCGCAGCCCCGCACGGCGGGT
GCTGCGCGTACCGCGACAGAGGCGCTGGAGGGTGCGCTTGAGGCGTAGAT
TTACCATAACCCTCACCTTAGGGTCGGCAACGAGACGGCATCAACCGCGC
CGCCCTCTCGCTGACATGAACAACGCAGTCAGGAAATTAATGCAGTGCTG
CGTGTAGACGACCGCCGCTGGTGTGTCGCAGTGAAGGAAACGGTTTCTGT
CCACTGTGCCGCCGCCGTGCCGCGCTGCCGCCGCCGCCGCCGCTGCCGCC
GCCGCTGCTCTTGCTGCCATTGTCAAGAGCCCAACCCCTCCGCGCTCACA
CCCGGTGCGCGCGCCAACTACACAAACTGCAGACGCGCTGCGCGCCTTCG
CCGGCGACACGGTGATCTACGCGGGCGAGCGCGGCGGCGACACGGGCACG
CCCGCCTTGGAGGCAGCGCTCAGCGCCGCGTGGGCCCCTGCTGCGCCCCC
CGTGGAGCTGCCCGCGTTCCCCAACACGGCGGCGTGCCTCATGGTGTTCA
GGCGGCGCCGCGGCGGCAGCGGCGGCAGCGGCGGCGGCGGCGGCGGCGGT
GGCGGCGCTGGTGTCGTCCGCGCTTTTGCCGCGGCGCCTGCAGGTGGGTG
TGCGCAGCGCTCAGCGGTTGAATAAAGGGGTGTGTACAGGGGTATGCGCG
GTGCACTTGAATTTCAATGCTGCCAAGTGCGATGCGCGTTGGCGATTTGC
TGTGACCGCGCTCGCTCGCGGCCGGCCACGTGGTTACAGCTGAGGCGGCG
TGCGCTGTTTCTTTCTCAACGAGCTCGAATCGTCGCGTTGCTGCTCGCTG
TTGCGAATCCTGAGCGGGCGTGCTGCAACTCTGCAGCCGTGCGGCGATAG
TGCGCTGTCTGGCAGCACCGCAGGCGGTGGTGGTCGGAACGCGTCTGCGC
GCTGCTGCGCCGCACCCCCCCCCTCGTCGTGACACGAGTGACACGCCCTG
AAGCGCTGTGCGAAGCTGCCTGTTGTCATGTTACGGTGGACACGGGCGTG
GAAGTACCGTCAAAGCACACCACGCGTCTGCAATGCTCGCCGGCCGGTGG
GGACGCGCGGATGCCGCCTGCGCCAATCACATCTGAAGTAGAGACAAAAG
TGAAGGGTACCGTGGCAGTGCTGTTTGTATGTCCACACAATTCTACAACT
ACGTAAACAACTCACGGCAGCGAACCATACCAGCGGATGATCGGTCACCA
ATTATCTCAGTCAGCAGCGATTCATCGAAAAGCTGCAACATGTCATCCGC
TTCGGACCAAGCTGAAATGCTGCTATTACCACCAATGCCCCCCCCTTCCC
CTTCACAGCAGGCGGCAAGGGCGCAGGGGGAGGGGCAGGGGCGCTGTCAT
CGTGCGCAGTGTGCAAGGCGACAGGGCAGGGGCTGCGTCGATGCCGCCGC
ACCAGGGCTGCATGCTACTGTAGCGAGGCGTGCCGAAAGGTACATTGCGA
AATGCATGTCGTAATTTAGTTCAATTTGGAGGGGAAAGACGTGGAGGCGA
TGGGGGGGGGAGGGGGAGGACAGCGGGGCTGTTCATCTCATATGCGTACG
TGCATTTGCATGCTTGCTTGTGCTGCTGTGGATGGTCTGCTTGCTGATTG
ACATGTTGCACTTCAGGTCATGGGCACATGCGCCGCGCATTTTCACGCTA
GCAGCCTCGCCTACGCTCTAGCGCTGCCGCTGCCGCCGCCGCCGCCGCGG
CACCGCAAGTACGCCGCCGCCGCGCAGGCGCAACAGCGATCCGCCCCATG
CAGATACCAGCTGCCATGCTGCTAACATGCGCGCCGTGCCGCCGCCGCTG
TTGATCGCTGTCTTATCAGACGGACGAGACGCGGCTGCAGGTGCTGCAGC
TGGTGCGGCACGTCAGGGCCCCTGCGGGAGTCGCCGTCGGCGGAAGCGGC
GGCGCGCCGTTCAACGACAAGAAGCGCTTCGCTCCGCTCTCACGCGCGTG
AGATGGGAGGCGGTGATCGCTCAGCAGCGCCATCAACTTCAACAACAAAT
TCAGCCCTCCCACGGAGAACAGTCGAGTTGACCTTGAGCTCTAGGCCATC
AGGCGAGCTGCTGTATGAGGGGC back to topCoding sequence (CDS) from alignment at Contig_16:228874..237946+ >mRNA_2943 ID=mRNA_2943|Name=jgi.p|Trimin1|347793|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2196bp|location=Sequence derived from alignment at Contig_16:228874..237946+ (Tribonema minus UTEX_B_3156 ) ATGGCGCCACAGTGTAAGGGCTGGGCGCCGCAGCAGCGCGCCAGCGCTGC CGCCAGGGGTGGCAGCGGCAGCACCAGTAGCAGCGGCGGCAGCAGCCTGG CGTGCAGCAGCTGCGGGCACCGAGCTGCGGCGCACCCGCTGCAGCCTGGC GCGCCTCCAGGCGCGACAGTTGCGCCCGCTGCGCAGCTCTTGAGGGACGC GTTCGCGTCGCTGAGGAATGCGCGCGCCGCGGGCGATGACGCAACGGGGG AGGGGGGACGCTGGGCAGGGGGCTGGGCGACCCCGCGCGTGCAGCAGGGT GTTGCCTCTGCAGCAGATGTGCTTCATGATGGAGGCAGCGGCGCGGCTGC GGCGATACAGCGCGCACAGTGTCTGGCTGCTTCGGCTCAGCCGCTGCTGC TGCCGCTGCCGCCGCTGCTACTGCTGCGGCGGCAGCGGCGGCTGCTGCTG CTGCTGCTGCTGCTACCACTGCTGTTGGCGCTGCCTGAGGGCGCCGCCGC CACTGTGATGCCGCAGGCGGGACTGGCGCTGGCGGCGGAGCTGGATGCTG TGTACTGGCATCTGCGCTATGCGGCGGTCACTGCGCCAGACGCCAGCGCC GGCAGCAGCGGCAGCGGCAGCGGCGGCGGCGGCAGCGGCGGCGGCGCGAC TACCGCCAGCTGCAACGCGCACATCGTGCCGCCCCCGGAGGTCTACTTCA CGTGTCTGAGCGGCCACATGTGCAGCGTTGCTCAGGCGCGCCGCGCGCTG CAAGCTTCGTGCGGCGCTGCGTGCGCGCCGCTGCTCGAGCACCTCAAGGC CACCATGGACCTGGATTTGCAGGGGGGGGGGAAGGGGAAGGCCACATGGC TGGAAATGGAGGTTGCCGCCGGTTACGGGCAGTGGTCGGGGGGGCTCCCC CTCACGCCGAGCCCCTACGAGGGCACCATGAGGGGGTCGGACCCCCTGCT ACCAGACATTGTGAGGACGCGCTGCGACAGCATCCGCGACTGGGCGGCGC GGTTGATGGCGTTTGCCGTGCCCAACGCCGCGGCGCTGCGGGTAATCGCG CGGGTCTGCGGCGCAGTCAGCGGCGGCGGCGATGGCAGCGCTCCTACCGG CAGCAGCAGCGGCGGAGGCAGAAGCGCGGCGCTCGTGGAGGTCGGCGCAG GGCTCGGCTACTGGAAGTGGGCGGCGCTGCGCGCATACCCGCGCATGTCT TACACGGCGTACGACAAGGATCCGCCGCCGCTGCCTGGCGCACGCGCGCC GCCGCCGGGCAGCCAGGGCGGCGGCAGCAGCAGGAAGGGCAAGGGCAAAA AGCAGCAGAACGCGTCAGCAGCAGCAGGCGGCAACGAGTACCACGGCAGA GCGCCTGCGTGGAGCGCTGTGGAGCGCGGCGGCACGGAGCGCGCAGGCGC CGCAGCGGCGCCGTCGCAGCAGCAGCAGCGCTCAGTACTGTTCCTGTGCT ACCCGCCGCCAGAGGGCACCATGGGCATAGCCCCGCACGGCGGGTGCTGC GCGTACCGCGACAGAGGCGCTGGAGGGAAACGGTTTCTGTCCACTGTGCC GCCGCCGTGCCGCGCTGCCGCCGCCGCCGCCGCTGCCGCCGCCGCTGCTC TTGCTGCCATTGTCAAGAGCCCAACCCCTCCGCGCTCACACCCGGTGCGC GCGCCAACTACACAAACTGCAGACGCGCTGCGCGCCTTCGCCGGCGACAC GGTGATCTACGCGGGCGAGCGCGGCGGCGACACGGGCACGCCCGCCTTGG AGGCAGCGCTCAGCGCCGCGTGGGCCCCTGCTGCGCCCCCCGTGGAGCTG CCCGCGTTCCCCAACACGGCGGCGTGCCTCATGGTGTTCAGGCGGCGCCG CGGCGGCAGCGGCGGCAGCGGCGGCGGCGGCGGCGGCGGTGGCGGCGCTG GTGTCGTCCGCGCTTTTGCCGCGGCGCCTGCAGCAGGCGGCAAGGGCGCA GGGGGAGGGGCAGGGGCGCTGTCATCGTGCGCAGTGTGCAAGGCGACAGG GCAGGGGCTGCGTCGATGCCGCCGCACCAGGGCTGCATGCTACTGTAGCG AGGCGTGCCGAAAGACGGACGAGACGCGGCTGCAGGTGCTGCAGCTGGTG CGGCACGTCAGGGCCCCTGCGGGAGTCGCCGTCGGCGGAAGCGGCGGCGC GCCGTTCAACGACAAGAAGCGCTTCGCTCCGCTCTCACGCGCGTGA back to top
|