mRNA_2893 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|347163
Unique Name	mRNA_2893
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|347163 vs. uniprot
Match: A0A835YJN4_9STRA (PAP2 superfamily C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJN4_9STRA)

HSP 1 Score: 933 bits (2411), Expect = 0.000e+0
Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 1

Query:    1 MPSFFGRGAAKRQLGWGGLSSASNGASPPVNGDVELESLQDPEAGAYGQQLSLLDVPYSPAQEISMGIEKGEWLTLCCPGGIPPGLRARVAELLSFAGWFIVGIPTAIQLPFLWYVFWQHVCSAGSVPPRDLDHLFARRALLLWLLWLAAVLYCRRVVHAVAPSAICAVLRNLELFTVAGLYVTMSANLCTFLHTPARPLYDLGFMLVPEQRVDSPWRPVSDVLAEAVPALLVLRSLCLRRPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISDXXXXXXXXXXXXXXXXXXXXXSWAGYCAAGAGLAVHAAADQCVELQGGPSVEVATAXXXXXXXXXXXXXXIRCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHCMRAEGYHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKTFQGRRGYAVASVLGFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGWAARAKGGGLSDEQLRNTRKDTIDLPADEDLVLPTSRQGWGASRLLVV 1611
            MPSFFGRGAAKRQLGWGGLSSASNGASPPVNGDVELESLQDPEAGAYGQQLSLLDVPYSPAQEISMGIEKGEWLTLCCPGGIPPGLRARVAELLSFAGWFIVGIPTAIQLPFLWYVFWQHVCSAGSVPPRDLDHLFARRALLLWLLWLAAVLYCRRVVHAVAPSAICAVLRNLELFTVAGLYVTMSANLCTFLHTPARPLYDLGFMLVPEQRVDSPWRPVSDVLAEAVPALLVLRSLCLRRPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISDXXXXXXXXXXXXXXXXXXXXXSWAGYCAAGAGLAVHAAADQCVELQGGPSVEVATAXXXXXXXXXXXXXXIRCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHCMRAEGYHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKTFQGRRGYAVASVLGFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGWAARAKGGGLSDEQLRNTRKDTIDLPADEDLVLPTSRQGWGASRLLVV
Sbjct:    1 MPSFFGRGAAKRQLGWGGLSSASNGASPPVNGDVELESLQDPEAGAYGQQLSLLDVPYSPAQEISMGIEKGEWLTLCCPGGIPPGLRARVAELLSFAGWFIVGIPTAIQLPFLWYVFWQHVCSAGSVPPRDLDHLFARRALLLWLLWLAAVLYCRRVVHAVAPSAICAVLRNLELFTVAGLYVTMSANLCTFLHTPARPLYDLGFMLVPEQRVDSPWRPVSDVLAEAVPALLVLRSLCLRRPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISDXXXXXXXXXXXXXXXXXXXXXSWAGYCAAGAGLAVHAAADQCVELQGGPSVEVATAXXXXXXXXXXXXXXIRCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHCMRAEGYHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKTFQGRRGYAVASVLGFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGWAARAKGGGLSDEQLRNTRKDTIDLPADEDLVLPTSRQGWGASRLLVV 537

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BLAST of jgi.p|Trimin1|347163 vs. uniprot
Match: D7FRP1_ECTSI (PAP2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRP1_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 5.920e-68
Identity = 144/418 (34.45%), Postives = 195/418 (46.65%), Query Frame = 1

Query:  253 GLRARVAELLSFAGWFIVGIPTAIQLPFLWYVFWQHVCSAGSVPPRDLDHLFARR--ALLLWLLWLAAVLYCRRVVHAVAPSAICAVLRNLELFTVAGLYVTMSANLCTFLHTPARPLYDLGFMLVPEQRVDSPWRPVSDVLAEAVPALLVLRSLCLRRPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISDXXXXXXXXXXXXXXXXXXXXXSWAGYCAAGAGLAVHAAADQCVELQGGPSVEVATAXXXXXXXXXXXXXXIRCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHCMRAEGYHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKTFQGRRGYAVASVLGFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGWAARAKGGGLS 1500
            GL A         G   + I   +    LW  FW  +        R     F RR  AL LW LW+A +   RR+++   P  + A+ RN E+  +  L++T++ N  T++HTPA PL+D+GF+++PEQ +DSPWRPVSD L   +P + +LRSL + R  R                                                                                                             ++ SW R V++VY LR  TI LTSLPGPAPHC     Y+PP  WH+IA RMG MVGD+++CGDL+FSGH +FTT+TML  VK+++G   Y V   LG +Y+ +MC LA+AGRKHYT+DI + ILV  LTF RF++GW A   GG  S
Sbjct:   70 GLFAASPSCAGGGGLCYLEIDARMPYAMLWVSFWMRIEEL-----RTRSTSFHRRTVALPLWGLWVAGLFCYRRMIYKRIPPDMVALFRNAEVLALVVLFMTVTVNFATYVHTPAEPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRV-----------------------------------------------------------------------------------------------------------TLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGWRASLNGGAGS 375

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BLAST of jgi.p|Trimin1|347163 vs. uniprot
Match: A0A6H5J947_9PHAE (PAP2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J947_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 2.510e-64
Identity = 137/411 (33.33%), Postives = 192/411 (46.72%), Query Frame = 1

Query:  253 GLRARVAELLSFAGWFIVGIPTAIQLPFLWYVFWQHVCSAGSVPPRDLDHLFARRALLLWLLWLAAVLYCRRVVHAVAPSAICAVLRNLELFTVAGLYVTMSANLCTFLHTPARPLYDLGFMLVPEQRVDSPWRPVSDVLAEAVPALLVLRSLCLRRPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISDXXXXXXXXXXXXXXXXXXXXXSWAGYCAAGAGLAVHAAADQCVELQGGPSVEVATAXXXXXXXXXXXXXXIRCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHCMRAEGYHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKTFQG--RRGYAVASVLGFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGWAAR 1479
            G R  + E+  F  W  V +   +Q+P LW+VFWQ+VC    V   D D    + AL LWLLW+    + RR +  +    +  V+ N E+F    + +T+ AN  T +H P  PL+D+GF LVP Q VDSPWRP+SD+L  A+P L  LR+L   R  R                                                                                                           C+ +  W R +++ Y +R   + LTSLPGPAPHC     Y PP+GWHD+A R+GP++GD+ TCGDL+FSGHT++TT++ML L K+F+   R  YA     GF+Y+ +M    +AGRKHYT+D+A+A+++  LTF RFQDG   R
Sbjct:  238 GWRGTMREMRGFLLWMAVILAHMVQVPMLWFVFWQYVCP--HVGNADPDRRVGKTALPLWLLWVLGFQHIRRHILGMLQPPLARVMLNGEIFISVSVLMTICANFSTMVHQPRLPLFDVGFYLVPAQGVDSPWRPLSDILTLALPGLAFLRTLFFDRRTR-----------------------------------------------------------------------------------------------------------CRFIADWFRLMSVTYLMRCLCVTLTSLPGPAPHCEALSEYDPPRGWHDVATRLGPLMGDFRTCGDLLFSGHTAWTTVSMLLLTKSFRRAPRLVYAFVKAAGFLYLLTMATCTIAGRKHYTVDVALAVVIAGLTFFRFQDGMLPR 539

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BLAST of jgi.p|Trimin1|347163 vs. uniprot
Match: A0A0P1APX3_PLAHL (Transmembrane protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APX3_PLAHL)

HSP 1 Score: 168 bits (426), Expect = 1.020e-42
Identity = 115/409 (28.12%), Postives = 178/409 (43.52%), Query Frame = 1

Query:  427 LWLLWLAAVLYCRRVVHAVAPSAICAVLRNLELFTVAGLYVTMSANLCTFLHTPAR-PLYDLGFMLVPEQRVDSPWRPVSDVLAEAVPALLVLRSLCLRRPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISDXXXXXXXXXXXXXXXXXXXXXSWAGYCAAGAGLAVHAAADQCVELQGGPSVEVATAXXXXXXXXXXXXXXIRCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHC-MRAEGYHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKT----FQGRRGYAVASVLGFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGWAA---RAKGGGLSDEQLRNT------RKDTIDLPADEDLVLPTSRQGWGASRLLV 1608
            +WLL+     Y RR+V +   + +  V+ + E+F    L +  S N+  +LH PA  PL DLGFM++PEQ++ S WRPVSD+L   +P + +L++  + RP R                                                                                                           C+V+ S+ R V + YFLR  T+ +TSLPGPAPHC + +  Y PP  W DIA R+GP+ G+Y +CGDLIFSGH ++T   +L  ++T    F GR    +    G  Y+  + +L +AGRKHYT+D+ + ++V+ L F  F+  W     +   G L  + L+        ++ ++DL AD+ L+     +G   SR L+
Sbjct:   55 IWLLFAGTFFYIRRLVRSRVDANLRGVMDHAEIFVAMSLVMVFSVNISFYLHVPATTPLKDLGFMIIPEQKLHSKWRPVSDILTAGMPVIFLLQTAVMTRPNR-----------------------------------------------------------------------------------------------------------CRVVSSFFRIVTICYFLRMLTVSVTSLPGPAPHCRVGSHDYFPPTSWIDIATRVGPIYGNYNSCGDLIFSGHMAYTVSAVLLYLRTLDRNFPGRMASKIRWACGLTYLIILAVLCIAGRKHYTVDVVLGLIVSTLVFFHFEHSWTPLCFQVPHGLLPLDDLQRIYGLQWRKRFSMDL-ADDALIEMDDSEGSEESRRLL 355

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BLAST of jgi.p|Trimin1|347163 vs. uniprot
Match: A0A5D6XG27_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XG27_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.020e-42
Identity = 116/403 (28.78%), Postives = 169/403 (41.94%), Query Frame = 1

Query:  274 ELLSFAGWFIVGIPTAIQLPFLWYVFWQHVCSAGSVPPRDLDHLFARRALLLWLLWLAAVLYCRRVVHAVAPSAICAVLRNLELFTVAGLYVTMSANLCTFLHTPAR-PLYDLGFMLVPEQRVDSPWRPVSDVLAEAVPALLVLRSLCLRRPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISDXXXXXXXXXXXXXXXXXXXXXSWAGYCAAGAGLAVHAAADQCVELQGGPSVEVATAXXXXXXXXXXXXXXIRCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHC-MRAEGYHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKTFQGR--RGYAVASVLGFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGW 1470
            E+  F  + +  +   +     W +F++ V     V P DL        +  WLL+ AA+LY R  V A     + ++  + E+F    L +  + N+  +LH P+  PL DLGF+ +PEQ VDS WRP+SDVL   VP + +L+SL + R  R                                                                                                             V+ ++ RC  + YFLRG TI LTSLPGPAPHC + +  Y PPQ W DI  R+GPM G+Y +CGDLIFSGH ++T   +L  ++       R  A+   LG  Y+  +  L +AGRKHYT+D+ + +L++ L F  F+  W
Sbjct:   41 EVAGFVAFMVFTVVMLVLSVLAWVLFFKFV-----VEPTDLRTRLTWGGV--WLLYTAALLYTRHFVRARLDRTLRSLGEHAEIFVAVSLVMVFAVNVAFYLHVPSSTPLPDLGFLFIPEQAVDSKWRPLSDVLTAGVPVVFLLQSLAMTRENRV-----------------------------------------------------------------------------------------------------------TVISTFFRCATVCYFLRGLTIALTSLPGPAPHCRVGSATYFPPQNWIDIVTRVGPMYGNYNSCGDLIFSGHMAYTNSAVLLYLRVLDRHAPRFSALRWALGAAYLLLLAALCIAGRKHYTVDVVLGLLISALVFFHFEHSW 329

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BLAST of jgi.p|Trimin1|347163 vs. uniprot
Match: D8LG44_ECTSI (PAP2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG44_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 1.370e-42
Identity = 70/139 (50.36%), Postives = 101/139 (72.66%), Query Frame = 1

Query: 1051 RCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHCMRAEGYHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKTFQG--RRGYAVASVLGFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQ 1461
            RC+ +  W R +++ Y +R   + LTSLPGPAPHC    GY  P+GWHD+A R+GP++GD+ TCGDL+FSGHT++TT++ML L K+F+   R  YA+    GF+Y+ +M    +AGRKHYT+D+A+A+++  LTF RFQ
Sbjct:   63 RCRFIADWFRLMSVTYLMRCLCVTLTSLPGPAPHCEALSGYDRPRGWHDVATRLGPLMGDFRTCGDLLFSGHTAWTTVSMLLLTKSFRRAPRLVYALVKSTGFLYLLTMATCTIAGRKHYTVDVALAVVIAGLTFFRFQ 201

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BLAST of jgi.p|Trimin1|347163 vs. uniprot
Match: A0A2D4CGJ0_PYTIN (Transmembrane protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGJ0_PYTIN)

HSP 1 Score: 161 bits (407), Expect = 1.410e-39
Identity = 112/403 (27.79%), Postives = 169/403 (41.94%), Query Frame = 1

Query:  274 ELLSFAGWFIVGIPTAIQLPFLWYVFWQHVCSAGSVPPRDLDHLFARRALLLWLLWLAAVLYCRRVVHAVAPSAICAVLRNLELFTVAGLYVTMSANLCTFLHTPAR-PLYDLGFMLVPEQRVDSPWRPVSDVLAEAVPALLVLRSLCLRRPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISDXXXXXXXXXXXXXXXXXXXXXSWAGYCAAGAGLAVHAAADQCVELQGGPSVEVATAXXXXXXXXXXXXXXIRCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHCMRAEG-YHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKTFQGR--RGYAVASVLGFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGW 1470
            E+L F  +  + +  A+     W +F++ V     V P D  H    +   +WL++   VLY R +V + +   +  +  ++E F    + +  S N+   LHTP+  PL DLGFML+PEQ VDS WRP+SD+L  AVP L ++++  + R  R                                                                                                           C+V+ ++ R   + Y LR  T+ LTSLPGPAPHC    G Y PPQ W D+  R+GPM G+Y +CGDLIFSGH ++TT  +L  ++       R       LG  Y+  +  L ++GRKHYT+D+ + +++  L F  F+ GW
Sbjct:   65 EVLGFVVFEALTVLIAVLGCLDWILFFKFV-----VEPED--HKTRAQWGGIWLIYTVCVLYFRALVRSKSDQHMRTLADHVETFIAVSMVMVFSTNIAFILHTPSTTPLRDLGFMLIPEQAVDSKWRPLSDILTAAVPVLFLVQAHLMTRENR-----------------------------------------------------------------------------------------------------------CRVMNTFFRVATISYALRMCTVSLTSLPGPAPHCRPGSGNYFPPQNWIDVVTRIGPMYGNYNSCGDLIFSGHMAYTTSAVLLYLRVLDRHFPRFSRARWALGVSYLVVLAALCVSGRKHYTVDVVLGVMIATLVFFHFEHGW 353

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BLAST of jgi.p|Trimin1|347163 vs. uniprot
Match: A0A662Y930_9STRA (PAP2_C domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y930_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.540e-39
Identity = 108/408 (26.47%), Postives = 168/408 (41.18%), Query Frame = 1

Query:  265 RVAELLSFAGWFIVGIPTAIQLPFLWYVFWQHVCSAGSVPPRDLDHLFARRALLLWLLWLAAVLYCRRVVHAVAPSAICAVLRNLELFTVAGLYVTMSANLCTFLHTPAR-PLYDLGFMLVPEQRVDSPWRPVSDVLAEAVPALLVLRSLCLRRPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISDXXXXXXXXXXXXXXXXXXXXXSWAGYCAAGAGLAVHAAADQCVELQGGPSVEVATAXXXXXXXXXXXXXXIRCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHCMRAE-GYHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKT----FQGRRGYAVASVLGFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGW 1470
             V   L FA + +V +   + +   W  F++ + +    P  D           +W+ + A   Y RR+V + A  ++ ++  + E+F    L +  S N+  +LH P   PL DLGFML+PEQ +DS WRPVSD+L   VP + +L++L + R  R                                                                                                           C+++ S+ R   + YFLR  T+ +TSLPGPAPHC      Y+PP  W DI  R+GP+ G+Y +CGDLIFSGH ++T   +L  ++T    F G     +    G  Y+  + +L +AGRKHYT+D+ + +++  L F  F+  W
Sbjct:   65 EVLGFLLFAVFMVVDVGLGVMV---WVTFFKFIVA----PEEDRSRATWGG---MWVAFAATFFYVRRLVRSRADVSLRSMADHAEIFVGMSLVMVFSVNIAFYLHVPTTTPLKDLGFMLIPEQAIDSKWRPVSDLLTAGVPVIFMLQTLFMTRANR-----------------------------------------------------------------------------------------------------------CRIISSFFRLATVCYFLRMLTVSVTSLPGPAPHCRAGSPDYYPPTTWIDIVTRVGPIYGNYNSCGDLIFSGHMAYTNSAVLLYLRTLDRNFPGHTASKIRWACGMSYLVVLSVLCIAGRKHYTVDVVLGLMIATLVFFHFEHSW 355

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BLAST of jgi.p|Trimin1|347163 vs. uniprot
Match: K3X811_GLOUD (PAP2_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X811_GLOUD)

HSP 1 Score: 160 bits (405), Expect = 4.210e-39
Identity = 116/422 (27.49%), Postives = 174/422 (41.23%), Query Frame = 1

Query:  217 WLTLCCPGGIPPGLRARVAELLSFAGWFIVGIPTAIQLPFLWYVFWQHVCSAGSVPPRDLDHLFARRALLLWLLWLAAVLYCRRVVHAVAPSAICAVLRNLELFTVAGLYVTMSANLCTFLHTPA-RPLYDLGFMLVPEQRVDSPWRPVSDVLAEAVPALLVLRSLCLRRPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISDXXXXXXXXXXXXXXXXXXXXXSWAGYCAAGAGLAVHAAADQCVELQGGPSVEVATAXXXXXXXXXXXXXXIRCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHCMRAEG-YHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKTFQGR--RGYAVASVLGFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGW 1470
            WL   C           V ELL F  W  + +   +     W  F+++V     V P D  H+  +   L W ++  ++L  R  V A     + A+  + E+F    L +  S N+  +LH P+  PL DLGFMLVP Q VDSPWRPVSDVL   +P + ++++  + R  R                                                                                                           C+V+ ++ R   + Y LR  T+ LTSLPGPAPHC    G Y PPQ W DI  R+GPM G++ +CGDLIFSGH ++T   +L  ++T      R   +   LG +++ ++  L ++GRKHY++D+ + I+++ L F  F+ GW
Sbjct:   79 WLCALCKS-------VDVRELLGFIAWEALIVLIVVLAVANWIFFFKYV-----VEPED-PHVSLKFGTL-WSMFTVSLLSFRSAVRAKCGDDVRALADHAEIFIAVSLAMVFSTNIAFYLHAPSDTPLRDLGFMLVPAQAVDSPWRPVSDVLTAVMPVVAMVQTYFMTRANR-----------------------------------------------------------------------------------------------------------CRVISTFFRVATVSYALRMLTVSLTSLPGPAPHCRPGSGLYFPPQTWIDIVTRVGPMYGNFNSCGDLIFSGHMAYTNSALLLYLRTMDQHFVRFSKLRWTLGAVFLLTLATLCVSGRKHYSVDVMLGIMISTLVFFHFEHGW 379

[Close]

BLAST of jgi.p|Trimin1|347163 vs. uniprot
Match: A0A5D6Y3E4_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3E4_9STRA)

HSP 1 Score: 159 bits (403), Expect = 5.250e-39
Identity = 122/426 (28.64%), Postives = 176/426 (41.31%), Query Frame = 1

Query:  211 GEWLTLCCPGGIPPGLRARVAELLSFAGWFIVGIPTAIQLPFLWYVFWQHVCSAGSVPPRDLDHLFARRALLLWLLWLAAVLYCRRVVHAVAPSAICAVLRNLELFTVAGLYVTMSANLCTFLHTPAR-PLYDLGFMLVPEQRVDSPWRPVSDVLAEAVPALLVLRSLCLRRPIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPISDXXXXXXXXXXXXXXXXXXXXXSWAGYCAAGAGLAVHAAADQCVELQGGPSVEVATAXXXXXXXXXXXXXXIRCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHCMRAEG-YHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKTFQGRRGYAVASVL----GFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGW 1470
            G WL   C       + AR  E+L F GW ++ +   +     W  F++ V        R  +         LW     A+L+ R  V A   + + A+  +LE+F    L +  S N+  +LH PA  PL DLGFMLVPEQ +DS WRP+SDVL   VP L +L++L + R  R                                                                                                           C+V+ ++ R  ++ Y LR  T+ LTSLPGPAPHC      Y PPQ W DI  R+GPM G + +CGDLIFSGH ++T   +L  ++T    R +A  S L    G  ++ ++ LL +AGRKHYT+D+ + ++V+ L +  F+  W
Sbjct:   40 GWWLCALCRS-----VDAR--EVLGFVGWKLLVLLVVVLAVADWIFFFKFVVEPDEPRARLQNGA-------LWSALTLALLHVRSAVRARCGADVRALADHLEIFIAVSLAMVFSTNIAFYLHAPAAAPLRDLGFMLVPEQALDSKWRPLSDVLTAVVPVLGLLQTLFMTRANR-----------------------------------------------------------------------------------------------------------CRVIATFFRVASVSYALRLLTVSLTSLPGPAPHCRPGSALYAPPQTWIDIVTRVGPMYGQFNSCGDLIFSGHMAYTNSALLLYLRTMD--RYFARFSRLRWLAGTAFLLALALLCVAGRKHYTVDVVLGVVVSSLVYFHFEYSW 342

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347163 vs. uniprot

BLAST of jgi.p|Trimin1|347163 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YJN4_9STRA	0.000e+0	100.00	PAP2 superfamily C-terminal-domain-containing prot...	[more]
D7FRP1_ECTSI	5.920e-68	34.45	PAP2_C domain-containing protein n=2 Tax=Ectocarpu...	[more]
A0A6H5J947_9PHAE	2.510e-64	33.33	PAP2_C domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A0P1APX3_PLAHL	1.020e-42	28.12	Transmembrane protein n=1 Tax=Plasmopara halstedii...	[more]
A0A5D6XG27_9STRA	1.020e-42	28.78	PAP2_C domain-containing protein n=1 Tax=Pythium b...	[more]
D8LG44_ECTSI	1.370e-42	50.36	PAP2_C domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A2D4CGJ0_PYTIN	1.410e-39	27.79	Transmembrane protein, putative n=1 Tax=Pythium in...	[more]
A0A662Y930_9STRA	3.540e-39	26.47	PAP2_C domain-containing protein n=2 Tax=Nothophyt...	[more]
K3X811_GLOUD	4.210e-39	27.49	PAP2_C domain-containing protein n=1 Tax=Globispor...	[more]
A0A5D6Y3E4_9STRA	5.250e-39	28.64	PAP2_C domain-containing protein n=1 Tax=Pythium b...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_8	contig	Contig_8:1716842..1725572 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|347163\|estExt_Genemark1.C_Ctg_80204
Description	sphingomyelin synthase activity
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	KOG3058@1\|root,KOG3058@2759\|Eukaryota
Evalue	2.66e-70
Seed ortholog	2880.D7FRP1
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Sphingomyelin synthase-like domain
Ec32 ortholog	Ec-11_002000.1
TranscriptId	347485
Track	FilteredModels1
ProteinId	347163

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347163	gene_2893	Tribonema minus UTEX_B_3156	gene	Contig_8 1716842..1725572 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347163	Trimin1\|347163\|estExt_Genemark1.C_Ctg_80204	Tribonema minus UTEX_B_3156	polypeptide	Contig_8 1717333..1725572 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_2893_11	exon_2893_11	Tribonema minus UTEX_B_3156	exon	Contig_8 1716842..1717492 -
exon_2893_10	exon_2893_10	Tribonema minus UTEX_B_3156	exon	Contig_8 1717888..1717922 -
exon_2893_9	exon_2893_9	Tribonema minus UTEX_B_3156	exon	Contig_8 1718348..1718461 -
exon_2893_8	exon_2893_8	Tribonema minus UTEX_B_3156	exon	Contig_8 1719199..1719336 -
exon_2893_7	exon_2893_7	Tribonema minus UTEX_B_3156	exon	Contig_8 1720169..1720283 -
exon_2893_6	exon_2893_6	Tribonema minus UTEX_B_3156	exon	Contig_8 1721374..1721465 -
exon_2893_5	exon_2893_5	Tribonema minus UTEX_B_3156	exon	Contig_8 1721553..1721610 -
exon_2893_4	exon_2893_4	Tribonema minus UTEX_B_3156	exon	Contig_8 1721851..1721919 -
exon_2893_3	exon_2893_3	Tribonema minus UTEX_B_3156	exon	Contig_8 1722024..1722125 -
exon_2893_2	exon_2893_2	Tribonema minus UTEX_B_3156	exon	Contig_8 1722222..1722611 -
exon_2893_1	exon_2893_1	Tribonema minus UTEX_B_3156	exon	Contig_8 1725232..1725572 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_2893	UTR3_2893	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_8 1716842..1717332 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_2893	CDS_2893	Tribonema minus UTEX_B_3156	CDS	Contig_8 1725232..1725572 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_8:1716842..1725572-
coding sequence from alignment at Contig_8:1716842..1725572-

spliced messenger RNA

>mRNA_2893 ID=mRNA_2893|Name=jgi.p|Trimin1|347163|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2105bp|location=Sequence derived from alignment at Contig_8:1716842..1725572- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCAGCTTCTTTGGACGTGGAGCAGCGAAGAGGCAGCTGGGATGGGG
AGGGCTTTCTAGCGCCAGCAATGGCGCCAGTCCTCCCGTGAATGGCGACG
TAGAGCTGGAGAGCTTGCAGGATCCCGAAGCAGGCGCCTATGGGCAGCAG
CTGTCCCTGCTGGACGTGCCCTACAGCCCGGCGCAGGAGATCTCTATGGG
CATAGAGAAGGGGGAGTGGTTGACGCTGTGCTGTCCGGGTGGCATCCCCC
CTGGACTCAGGGCCCGCGTGGCGGAGCTGCTGTCGTTTGCGGGGTGGTTC
ATCGTGGGCATTCCCACCGCTATACAGCTGCCCTTCCTCTGGTACGTCTT
CTGGCAGCACGTGTGCAGCGCGGGGAGCGTGCCGCCGCGCGACCTCGACC
ACCTCTTCGCGCGGCGCGCGCTCCTCCTGTGGCTCCTCTGGCTCGCGGCA
GTGCTCTACTGCCGCCGTGTCGTGCACGCCGTCGCGCCGTCCGCCATCTG
CGCCGTCCTGCGCAACCTCGAGCTGTTCACCGTCGCGGGCCTGTACGTGA
CCATGAGCGCAAACCTGTGCACGTTCCTGCACACGCCCGCGCGCCCGCTG
TACGACCTCGGCTTCATGCTCGTGCCGGAGCAGCGCGTCGACTCGCCGTG
GCGGCCTGTCAGCGACGTGCTCGCGGAGGCGGTGCCCGCGCTGCTGGTGC
TGCGCTCGCTGTGCCTGCGGCGGCCGATCAGGCAGCGCGTCGACTCGCCG
CGGTGGTCGGTCAGCGACGTGCTTGCGGAGGCGGTGCCCGCGCTCCTGGT
GCTGCACTCGCTGTGCCTGCGGCGGCCCATCAGCGACGTGCTCGCGGAGG
CGGTGCCTGCGCTGCTCGTGCTGCGCTCGCTGTGCCTGCGGCGGCCCATC
AGCTGGGCGGGTTACTGCGCTGCTGGTGCTGGACTCGCTGTGCATGCGGC
GGCCGATCAGTGTGTGGAGCTACAGGGCGGCCCGTCTGTGGAGGTGGCGA
CGGCGCCTGCGCTGCCTGTGCTGCGCGCGCTGTGCCTGCGGACGCCCATA
AGATGTCAGGTGCTGGTGAGCTGGCTGCGGTGCGTGGCCTTGGTCTACTT
CCTGCGCGGGTCCACCATCCCGCTCACAAGCTTGCCGGGGCCGGCGCCGC
ACTGCATGCGCGCTGAGGGGTACCACCCGCCGCAGGGCTGGCACGACATT
GCGATTCGGATGGGACCGATGGTGGGGGACTACACCACGTGCGGAGACCT
GATATTCTCCGGGCACACATCGTTCACCACGATGACAATGCTGTGTCTGG
TCAAGACATTCCAGGGGCGGCGCGGGTACGCCGTGGCCAGCGTGCTGGGG
TTCATGTACGTGGCAAGCATGTGCCTGCTGGCGCTCGCCGGGCGAAAGCA
CTACACCATCGACATTGCGATTGCCATCCTGGTGACGTGGCTGACATTCC
ACAGGTTTCAAGACGGCTGGGCGGCGCGCGCCAAGGGCGGCGGCCTGAGC
GACGAGCAGCTGCGCAACACGCGCAAGGACACCATCGACCTGCCCGCAGA
CGAGGACCTCGTGCTGCCCACGTCGCGACAGGGCTGGGGCGCCTCGCGGC
TGCTGGTCGTATGACGCGGCGTGTGCTCGTTGAACGCTGTGCACCGCGCG
CGCTGCTGCGTGCGCTGCACCGACGATGGCGCACGCAAGAGCGGCGGGGG
GGGCGCTGCCGCCGCCTCCGTCGCCGCAGCCGTTGATACAGCGTTGCGGC
ACCTGTAGCATACGTGCTGCGGCTAGCTGGCCACTGCTGCTGCAACAGTT
GCTGCAGCTGCTGCGATGGACACGCATTTGGCCACTGCTGCAGTATGGCA
GACTTTTACGTGCTGGCGCGCACGGCCCGTTGAGGTGTTGAAAGGCTTTT
TGGGGGGCGAGGGCAGGGCTTGGGTTGTCGTCGCACACCACGTGGTTCCC
AATTGGCTGCGGGAGTCTCACAGACACGATGTTGTGAGCACTGCTAGCGA
GTCTCGTGCTCAGGCAGTGTTGAGTGCAGCAGCACGTGCACCTGCACATG
CGACGCCTTCGGCAGCTTGCCACCAATAGCCATTCAGCTACTCACAAGAC
TGTCA

protein sequence of jgi.p|Trimin1|347163

>Trimin1|347163|estExt_Genemark1.C_Ctg_80204 ID=Trimin1|347163|estExt_Genemark1.C_Ctg_80204|Name=jgi.p|Trimin1|347163|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=538bp
MPSFFGRGAAKRQLGWGGLSSASNGASPPVNGDVELESLQDPEAGAYGQQ
LSLLDVPYSPAQEISMGIEKGEWLTLCCPGGIPPGLRARVAELLSFAGWF
IVGIPTAIQLPFLWYVFWQHVCSAGSVPPRDLDHLFARRALLLWLLWLAA
VLYCRRVVHAVAPSAICAVLRNLELFTVAGLYVTMSANLCTFLHTPARPL
YDLGFMLVPEQRVDSPWRPVSDVLAEAVPALLVLRSLCLRRPIRQRVDSP
RWSVSDVLAEAVPALLVLHSLCLRRPISDVLAEAVPALLVLRSLCLRRPI
SWAGYCAAGAGLAVHAAADQCVELQGGPSVEVATAPALPVLRALCLRTPI
RCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHCMRAEGYHPPQGWHDI
AIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKTFQGRRGYAVASVLG
FMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGWAARAKGGGLS
DEQLRNTRKDTIDLPADEDLVLPTSRQGWGASRLLVV*

mRNA from alignment at Contig_8:1716842..1725572-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_2893 ID=mRNA_2893|Name=jgi.p|Trimin1|347163|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8731bp|location=Sequence derived from alignment at Contig_8:1716842..1725572- (Tribonema minus UTEX_B_3156 )
ATGCCCAGCTTCTTTGGACGTGGAGCAGCGAAGAGGCAGCTGGGATGGGG
AGGGCTTTCTAGCGCCAGCAATGGCGCCAGTCCTCCCGTGAATGGCGACG
TAGAGCTGGAGAGCTTGCAGGATCCCGAAGCAGGCGCCTATGGGCAGCAG
CTGTCCCTGCTGGACGTGCCCTACAGCCCGGCGCAGGAGATCTCTATGGG
CATAGAGAAGGGGGAGTGGTTGACGCTGTGCTGTCCGGGTGGCATCCCCC
CTGGACTCAGGGCCCGCGTGGCGGAGCTGCTGTCGTTTGCGGGGTGGTTC
ATCGTGGGCATTCCCACCGCTATACAGCTGCCCTTCCTCTGGTGAGTCGC
TGGTGACCTAGTATCAGCTATCAGTGCGACATTGCGTGAATGCATATTAG
AATCAGCTGCATCTGTAAACAACAGGCAGGTGTGTTTCCTCCATGAATCT
GTGGCAACTTTTCTGGCACATCGTTGTCCGGGTCTGTTGGCACAAATTAC
AGTACCCAGGCGTTCAGTGCTGGAATTGCACGTGTTGAACTCGTACTGAC
AGATTCATATCAACAGCAATGCACGCGGGTCGCAAACATGGATTGATGGC
GCTTGAATGTCCACCTACGTCAATGGACAAACAGCATATGGCAGTTGCTG
CCAGCGGCACGCTGGTACTGGCCTGCATGGTACCCCAATCAAGATGCCAG
TATTGCGCCAAGCTTCAGGCAGCTGTTGAGCAAGTCATCATCACCTGAAC
TCATAAATGTTGTGGCGGTTCGACATGCAAATTGGCTTAGGGCGGTGTGG
TAACATTGCCAACACACATGGCGAGAGAGGAAGCGGAAAGTTGATGTGGT
CTTCGAATGCAGTCTGCAGTGATGTCATGAAAAGTAGTGGTCAGCAGTCT
CGTTGTACACATGCACACATGCGTCCGCAAGTGCTGCAGCATACATTCGT
GAATCAGATGGTTTGACACGTTTCAACACAATCACTGCATTACATGGCTT
CATTGCATACATCACCATCCTCTCATTGAAAAAGTAGGTTGTCACATATT
GGCAGCACTGCAGCACTGCATCGCTTTAGCTTCCGTAATTGGCTACGTTT
TGAGCATCACAATAATTACAAGGTGAACCACACAGCCTGTAGCTATGTTC
TTTCTCATGAACAATGCACGCTGTCTTGGGACACCTGTCGCCCTGCACTC
GCGCCAATCCATGCCAGTACGTGCTGGCCACGGTGCTGCCGTCAGACAAG
GCATATACGAGTCATACTTCGAAGTATCCTGCAGCACATTCGTTAGTTAC
CTGGCCACCTCTGAATGCTGATGCTCTGCGTGAGATAGCTCCGCAGGATC
GCAGCTCTTTGCGCATGTTGGTGTCAGTGAGGCTGTGGTCTGATGCACCC
TGAGTCATCCTGCCAAACAGCCTACACCAACATAGCATAGCATTTCAGCA
AGAGCTGCATTTGTCTTGAGAATTCAAGCACGCCCGAGCGCATCGCGGTT
GACACCACCGGCAGATGTAAAGGCATGCTGCACTTCAACTTGTAACAGAC
CAGAGTGTTGGCGCAAGTACTGTTATCAGCAAGGAAAGTCGTATGACCTT
CTTCTGTGTGAGGCCACCGCAACAAAAGTGTATCTGCAATGTGTCCACAG
CACGCAGATTGCTGCAGTCCTTGGACTGTAGACAGTTTCATTCCATTCAG
AAAAGCTTGCAGCCTACATGCGCCGTCAGCTCATCATTGCAGTCATTCCT
AAGCCCGTTTACGGTGCCACTCGTGTGGTGCGCCAGAATGCTTGATGGTT
GATACGGTATCCTAGACCATCAAGCACGCCTTTCACAGCAGAGAGCGGAT
GATAATTCGGTGTACACAAACGAGGAGCTCCAAGAAGCCACACATGAATG
ACAACAGAACGCCACGTCGTATATTGGGCTTTTGCAGCAATTGGCATATG
TAGACAACAGTGATTGCCGCGCCCACTGTATGCCTTTCAATGCCTGCTTA
TATGCTACGTCGAAGTACTTGAATCACTGACGCAATGCCAGAGTACGTCC
AGCAGGTCACCAGAAGTCAGTGTGAGAAACAAAGTTTTAGCTCAGATGGA
ATGGCCTAGTGCACATGACAACGGCCACCACTGCTACAACACGATCTGTC
GCCGCCTGATGCGCAGTGCCGCGGGCGCTCTGTCACTGAACCTCATCAAG
TTGATGGCAGGGTAGCAATGACAGTAGGTATGTATTACTGATCAATGTGA
CAACACGGTTGCTGCAGCCATGTGCGCAGCGCCGCGGACGCGCTGCCTCT
GAACTTCATGGAGCTGATGGCGGGTAGCAAATACAGGATTTATCACTGCC
CAGTCACATTGTCCTGGCCACTTGGTCATCAGTGTGATGGTGATGTCACA
AGCAAGCACGTGCGCGCAAATGGAAGTAGGCTAGTAATATGCCATAAGTA
CAGCACAATCACCTCTCGAAGGCTATATTTGCACAAAATTTGGCTTCTGA
TAGCCTGGCAACAGAGCCGAGCATGCCTTATTGCATCTCTCCAACTGTTG
AAGCAGCCGACTGCTCACATCAGGTGCATGAGGCGTTGCTACCCGCAACA
GTTCGCCGTGCTTCGCAGCACAGCCCTCCCTCAGTTGCAATGTTCTGACA
ACCCATGCAGCAGTGCCCTCATGTGACTTCCGACGCCGCTCACTGTACAA
CGCCCCGATGACTTCATGTGTAGGTGGCGACGCACCACGCAGCGCGTCCT
CACGCGCCCCTGCCTGCATCAACACTCACGCGTCACAGCATCGCATTGCG
CGGCGTACAGCGCTCGCTTTCACAACTTCAACTTCAACAAGAGCGCTCGC
TCAGTGACGCTCACCGCGGCCACTCCAGAAACGTGACGCAGCCCCATTTG
TGTCCCACATCGCCTCACCGACACCCCCCCCCCCCCAACCCCCTCCCCCT
CTCGCGCGCAGGTACGTCTTCTGGCAGCACGTGTGCAGCGCGGGGAGCGT
GCCGCCGCGCGACCTCGACCACCTCTTCGCGCGGCGCGCGCTCCTCCTGT
GGCTCCTCTGGCTCGCGGCAGTGCTCTACTGCCGCCGTGTCGTGCACGCC
GTCGCGCCGTCCGCCATCTGCGCCGTCCTGCGCAACCTCGAGCTGTTCAC
CGTCGCGGGCCTGTACGTGACCATGAGCGCAAACCTGTGCACGTTCCTGC
ACACGCCCGCGCGCCCGCTGTACGACCTCGGCTTCATGCTCGTGCCGGAG
CAGCGCGTCGACTCGCCGTGGCGGCCTGTCAGCGACGTGCTCGCGGAGGC
GGTGCCCGCGCTGCTGGTGCTGCGCTCGCTGTGCCTGCGGCGGCCGATCA
GGTGAGCTCGCCGCTGCGGCTGTTCTGAAAACTTCAGGTTGAAGTATGTA
CATACATATGCGGCGCTGGATGATTTGAGGGTGATGCTGGTGCAGAGGCA
GCGCGTCGACTCGCCGCGGTGGTCGGTCAGCGACGTGCTTGCGGAGGCGG
TGCCCGCGCTCCTGGTGCTGCACTCGCTGTGCCTGCGGCGGCCCATCAGG
TGAGCGCGCAGTGGCTGTTCGTGATAACCTCAAGTTGAAGTATGCACGCA
GCGCTGTGAGCTCGTGCGGAGCAGCGCGTGGACTCGCCGTGGCGGCCCGT
CAGCGACGTGCTCGCGGAGGCGGTGCCTGCGCTGCTCGTGCTGCGCTCGC
TGTGCCTGCGGCGGCCCATCAGGTGAACGCGACGCCGTGACCGTTGTGAA
AACCTCAAGCTGAAGTACAAATGCGACGCTGCACATGTCACGTTAGGGGT
TGTGGAGGAGCAGCCTACGCTGCTGGTGCTGCGCTCGCTGTGCGTGCGGC
GGCCCATCAGGTGAGCGTAATGCTTTGACTGGTTGCAAAAACCTCAAGTT
GAAGTATGCACGCGGCGCTGCACCATGTTAGGGGTGTGGACTGCCTCTGA
GCAACGCGCCAGCTGGGCGGGTTACTGCGCTGCTGGTGCTGGACTCGCTG
TGCATGCGGCGGCCGATCAGGTGCGCGTGAGTGCACACTTTGCAGTATAA
GTCGGAAGTATGTGTGCGACGCTGCACAACTTGAAGTTCGTGCTGATGCC
GGAGCAGTGTGTGGAGCTACAGGGCGGCCCGTCTGTGGAGGTGGCGACGG
CGCCTGCGCTGCCTGTGCTGCGCGCGCTGTGCCTGCGGACGCCCATAAGG
TGCGTGACAGCGCTCAGATAGAAGTACACTTGGTTGAGGCAGAAGTAGGA
GTGTATGGGGGGGGGGGACTGCTGTGTGCTCATGCTGCGCTCGCTCTGCG
TGCGGAGGCTAATCAAGCCAGCACACCGATGCTCAGATATACTTGTTGAA
GTAGAAGTTGATGTATGCATGCGGCGCCCCCGTGGATTGAGGTCATGCTT
TCACCGGTGCGGTCGATGGATTTATGGCTTGGTGTCTGTCAGCAGTGCGC
TTGCGAAGGCGATGGCGGTGCTGCGCGTGCAGCACTGGTTCTGCATGCAA
AAGGCCTGACAAGTCTGATCGCTTCGTTTACTCTAGGTGCACCGTTGGCA
CATGCTGCTATCACATAATACATGCGGTAGCGCAGTCATGTGGGACGTGA
AACTGGCCAGCGATGCGCTTGGCCAAGCAGTGCTGGCCGTCCTCGTGTTG
CGCTTGCTGACCGCTCTGCCCCTGGTGAGGCTCAGCAGGCGAGCACTGAC
GCACTTCACGACAGCTATGCAACCACGTACAAGTGAATATTGTCTGATGG
TTTGCCATGGAGACCTAATCACCGATGTGCACGGTCGAGGCCATGCCCTT
CTCACCTGATGCTGCGCTCGCTGCGCCTGCACAAGCCCATCATGATGATG
ATTGAGGCATGTTCCTGCTTTTGCATCTTCACCTGATTCAGGGTACAGAC
GCCAGCTTTGACCAGTATATGGTGCAGCAGCGGCGTGTGACGTCGCTGTA
GTAGCCATACAGCGTTATGCTGGTGGACGCACTGCTCGCACTGCTGGTGC
CGTGCGTGATGCGCGCGTCAGGTGCCGGAGTTACTTCAAAGGTTGTGAGG
TGTTCAGCTGGTCAGACGCTGCATGATGTAAACGTTCGAAACGCACTTTG
CAATATATGACACGCAGATGCCGGACGCTGAACATGAACATGAAGTTTCC
AGATACACAGGTGACACTCAACCATTGAGGGCCTCAAATGTGGTACTCAT
GGCATCATATTTGAATGTGTTTGGCACTGCCAGTATGCCCGCTGCTAATC
GGTGAGTACATCTGTGTATCCATGTCTTCACCATCACAGATGTCAGGTGC
TGGTGAGCTGGCTGCGGTGCGTGGCCTTGGTCTACTTCCTGCGCGGGTCC
ACCATCCCGCTCACAAGCTTGCCGGGGCCGGCGCCGCACTGCATGCGCGC
TGAGGTGGGTGCAGCGCTCAACTCGCACAGCTCCTAAACATCTGGAACAA
TGCCGGGTCTTACATAATTCTGTAGCGAAACAGTTGGCGTTGGCGTTACT
TTAGGGTGCCATACTCGCACAGCTTAAACATCTCAAGCTAAGTGGGTCTC
ACAGATTTTTGAAGCGAAACAGTTGGCGTTGGCGTTACTTCAGGGAATGG
CACCATGTCACAATGTGTGGCTATATTGTGTTGTTCACTCAGCGGTGTGT
GTGGCGCCATGATAGCCGGCAGCAACGCTCGCCGGTACGCTCGTCAACAC
GAGGTGCATGCTGGCAGCTGCTTGGCAAGGTCAGCCCTGCTTGTGTGCCT
TGTGCATGCCAGTGACACATTTTCAAAAATTACAATCGACCAGTGCATAT
CATTAGTACAGCGCGTGGCTGGAATGATGTGTGATGCAGATAGGGGCGCA
TGCAACAGCGGTGGTGCCGCACTGTGTTTGAGCGTCGTCAACGTGCTTTA
CAGGCCGCACTAGGTTAGCGTCATGCCGCACCATTGGCGTACCGCCCTTG
TCCTGTGCTTGACATGGGTATCAACCGGTGAAGATTGTGGTAGAGTTGGA
TATGATTATTAGCAAGAACAGGACTGCCGTATGATGTCATTGTGACACAG
GTGCAGCTGTCTTCCCCCTCACAGGTATGCATCACCCCTTGGGAGCAGTG
CGGACAACTAGCCCAAGTGCTACTAGCGAACTCAAGCACATACAATTTTC
TTGAAATATGTCCACGGCCACAAGAGGCATCTACACATTTTGAGCGGCCA
GCGCTGCTCCCCCCCCCTAAATGTGTGCATGCGCAGGGGTACCACCCGCC
GCAGGGCTGGCACGACATTGCGATTCGGATGGGACCGATGGTGGGGGACT
ACACCACGTGCGGAGACCTGATATTCTCCGGGCACACATCGTTCACCACG
ATGACAATGCTGTGTCTGGTCAAGGTATGCAATGAGTCATTGCCATTAAC
AGTGTACTGAAGTGTGTGTCGTCGTCATTGTCTCGTCACGATTCTGCAGC
ACCGTGCAATTCAACGTGACGTCGTTCATTAAACTGCGCTCAAGTAGGAG
TTCAGGCATGTCATTTTGCGCTGTGCCAGTCACTACGCGCACAGTGCTGC
GGTGTGAGTAACGTGAGTCGCGCTGCTCATCGGGCATGGATTACTCAAAG
TGCATCACACCTTTTTGAAAGTTGGGCTGCGCGCTTGTGGGTGTTCCGGT
GAAAGTCAGAATGGGCCTGTGCGATGGCATTGTGGGGCAGAATTGGCTTT
CGTCGTTGTGGCCACCACACTGAGAGTGCTGCTGCAATTCAGCATTTACG
CGTTGCGCTATATTGCCAATTGCTGCAGCAGCGGCAACCACGGTTATTGG
TGGAAGGCACTTGCGGCTAACCATCCCTTGCCACCTAGTGCTCTGCGATC
TTTTGATTTGTTTTCATATTGATACTAGCTGGCTGCCGCTTCAGTGCGGC
GCATTACCCTCAAGGCTCTCGCAGCGCAACTTGTCAAGTATGTTGAGCAC
GCACGCCGCATACCATAATTATTAATCACCATGCAGCATACATGACGTAC
TATACGAACAGCGCACCTTCACACAGAAGCACCAGCATGCGCTGCCCCAT
ACAGCATGCAGTGGCGATAGTAGAACCTCACACCAGTGCCTCAATGTTGA
CCGCGCCGCAGACATTCCAGGGGCGGCGCGGGTACGCCGTGGCCAGCGTG
CTGGGGTTCATGTACGTGGCAAGCATGTGCCTGCTGGCGCTCGCCGGGCG
AAAGCACTACACCATCGACATTGCGGTGAGCGATGCACTGCTCGGAATGC
GCCGGCTGCTCAGCGTCTGTGTGTGGTGCATTCTTTTCCGTCAATGCCTT
GCACTGCTTGTCGCGGGTAGTATCAGTGTGGAAATACACGGTTTGAGCGG
GGGCACTGGGCTCATGCATACGTACATACCCCCTAAATTGACTGGTACTC
CGAAGTATCATTGTTCTCGCTCCCAACGCTTGCTTGCCGCAGTGCTGCGC
GCACATGTACCTCCAGCTGGAAGTGGTCTGCAGCGCAAGCCCTTGTAGAA
CCTGCAGTTGAGCGCTGATGCAGCCAGGCCTTTACTGCAGATCATCTCTC
GCCATATTTGTTCACACCAGACTGCTGCAAATAAGTGCCTTGCTCATCAG
TGCTCTTTGCCACCCGTGTTTGCCGCTTCTGTTGCGCCCCCGCCACACAG
ATTGCCATCCTGGTGACGTGGCTGACATTCCACAGGTATGCATTGCTTGG
TGGCCCCACACTCACGAAATACATGCTGCAGGATGCGGCGTCATGCTGAA
ATGCAGTTGCTGCCATGTGGTGCAAGCATGATACATTGCGAGGGATGTAT
GTAATGCAGAGTTGCAGTTTCATGGCGCTGGTTCAGTTACCTGCGCTGCC
GCACGGCCCATCAGCATGCCCAGGGGCGTAGGATGCTGCCGGATCTTCAA
GATTGGTGCAACAACACAGAGCCATAAACATGTCAGCGCGCTCGAGCAGT
GTTTACCAAGCGGGTGCGGCGGCATTTTTCACAGGGTGTAAGAAGTCATT
GATGAAAACAAACAACTTACATCTGCATTACTTACTCTTACAACGGCTCA
CTGGTGTCACACCGCACCCTGCGGCGATAGGTTTCAAGACGGCTGGGCGG
CGCGCGCCAAGGGCGGCGGCCTGAGCGACGAGCAGCTGCGCAACACGCGC
AAGGACACCATCGACCTGCCCGCAGACGAGGACCTCGTGCTGCCCACGTC
GCGACAGGGCTGGGGCGCCTCGCGGCTGCTGGTCGTATGACGCGGCGTGT
GCTCGTTGAACGCTGTGCACCGCGCGCGCTGCTGCGTGCGCTGCACCGAC
GATGGCGCACGCAAGAGCGGCGGGGGGGGCGCTGCCGCCGCCTCCGTCGC
CGCAGCCGTTGATACAGCGTTGCGGCACCTGTAGCATACGTGCTGCGGCT
AGCTGGCCACTGCTGCTGCAACAGTTGCTGCAGCTGCTGCGATGGACACG
CATTTGGCCACTGCTGCAGTATGGCAGACTTTTACGTGCTGGCGCGCACG
GCCCGTTGAGGTGTTGAAAGGCTTTTTGGGGGGCGAGGGCAGGGCTTGGG
TTGTCGTCGCACACCACGTGGTTCCCAATTGGCTGCGGGAGTCTCACAGA
CACGATGTTGTGAGCACTGCTAGCGAGTCTCGTGCTCAGGCAGTGTTGAG
TGCAGCAGCACGTGCACCTGCACATGCGACGCCTTCGGCAGCTTGCCACC
AATAGCCATTCAGCTACTCACAAGACTGTCA

Coding sequence (CDS) from alignment at Contig_8:1716842..1725572-

>mRNA_2893 ID=mRNA_2893|Name=jgi.p|Trimin1|347163|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1614bp|location=Sequence derived from alignment at Contig_8:1716842..1725572- (Tribonema minus UTEX_B_3156 )
ATGCCCAGCTTCTTTGGACGTGGAGCAGCGAAGAGGCAGCTGGGATGGGG
AGGGCTTTCTAGCGCCAGCAATGGCGCCAGTCCTCCCGTGAATGGCGACG
TAGAGCTGGAGAGCTTGCAGGATCCCGAAGCAGGCGCCTATGGGCAGCAG
CTGTCCCTGCTGGACGTGCCCTACAGCCCGGCGCAGGAGATCTCTATGGG
CATAGAGAAGGGGGAGTGGTTGACGCTGTGCTGTCCGGGTGGCATCCCCC
CTGGACTCAGGGCCCGCGTGGCGGAGCTGCTGTCGTTTGCGGGGTGGTTC
ATCGTGGGCATTCCCACCGCTATACAGCTGCCCTTCCTCTGGTACGTCTT
CTGGCAGCACGTGTGCAGCGCGGGGAGCGTGCCGCCGCGCGACCTCGACC
ACCTCTTCGCGCGGCGCGCGCTCCTCCTGTGGCTCCTCTGGCTCGCGGCA
GTGCTCTACTGCCGCCGTGTCGTGCACGCCGTCGCGCCGTCCGCCATCTG
CGCCGTCCTGCGCAACCTCGAGCTGTTCACCGTCGCGGGCCTGTACGTGA
CCATGAGCGCAAACCTGTGCACGTTCCTGCACACGCCCGCGCGCCCGCTG
TACGACCTCGGCTTCATGCTCGTGCCGGAGCAGCGCGTCGACTCGCCGTG
GCGGCCTGTCAGCGACGTGCTCGCGGAGGCGGTGCCCGCGCTGCTGGTGC
TGCGCTCGCTGTGCCTGCGGCGGCCGATCAGGCAGCGCGTCGACTCGCCG
CGGTGGTCGGTCAGCGACGTGCTTGCGGAGGCGGTGCCCGCGCTCCTGGT
GCTGCACTCGCTGTGCCTGCGGCGGCCCATCAGCGACGTGCTCGCGGAGG
CGGTGCCTGCGCTGCTCGTGCTGCGCTCGCTGTGCCTGCGGCGGCCCATC
AGCTGGGCGGGTTACTGCGCTGCTGGTGCTGGACTCGCTGTGCATGCGGC
GGCCGATCAGTGTGTGGAGCTACAGGGCGGCCCGTCTGTGGAGGTGGCGA
CGGCGCCTGCGCTGCCTGTGCTGCGCGCGCTGTGCCTGCGGACGCCCATA
AGATGTCAGGTGCTGGTGAGCTGGCTGCGGTGCGTGGCCTTGGTCTACTT
CCTGCGCGGGTCCACCATCCCGCTCACAAGCTTGCCGGGGCCGGCGCCGC
ACTGCATGCGCGCTGAGGGGTACCACCCGCCGCAGGGCTGGCACGACATT
GCGATTCGGATGGGACCGATGGTGGGGGACTACACCACGTGCGGAGACCT
GATATTCTCCGGGCACACATCGTTCACCACGATGACAATGCTGTGTCTGG
TCAAGACATTCCAGGGGCGGCGCGGGTACGCCGTGGCCAGCGTGCTGGGG
TTCATGTACGTGGCAAGCATGTGCCTGCTGGCGCTCGCCGGGCGAAAGCA
CTACACCATCGACATTGCGATTGCCATCCTGGTGACGTGGCTGACATTCC
ACAGGTTTCAAGACGGCTGGGCGGCGCGCGCCAAGGGCGGCGGCCTGAGC
GACGAGCAGCTGCGCAACACGCGCAAGGACACCATCGACCTGCCCGCAGA
CGAGGACCTCGTGCTGCCCACGTCGCGACAGGGCTGGGGCGCCTCGCGGC
TGCTGGTCGTATGA