mRNA_2863 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|335503 vs. uniprot
Match: A0A835YT11_9STRA (PlsC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT11_9STRA) HSP 1 Score: 1001 bits (2587), Expect = 0.000e+0 Identity = 545/545 (100.00%), Postives = 545/545 (100.00%), Query Frame = 1 Query: 1 MLMSRRAAQVALLCTILSCTRLSALQLPRAVRLGSVQHVSHHSSFAGCSASLPLRFGLQSCWRTTNVPLRASAAAPIPDENSGATQRKWEAAAPAQQESRPVVKTGLHVNIAGRALNAYGLLYAITSTLTGLLVFPLVAVVRTLNGRWHRCTRLVDRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDVPVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKPAVTIVIHAPVDPAVEGVEGAMRSARAAIASGLPRYEHVSGAMAATRNQLSAAAACGRGSXXXXXXXXXXXXXXXXLARQARSHRIRWLALPLADVFYQMSTALTQCSTHRAKPCQGREQQGFVRACCIVATANAAALGGGSDXXXXXXIXXCSGGVCLRPCTRPRPGKYPSQQRRKSFVYRWQYGTAFAAHLTVAVPGWRQCGAVMARAATAAAMPVATA 1635 MLMSRRAAQVALLCTILSCTRLSALQLPRAVRLGSVQHVSHHSSFAGCSASLPLRFGLQSCWRTTNVPLRASAAAPIPDENSGATQRKWEAAAPAQQESRPVVKTGLHVNIAGRALNAYGLLYAITSTLTGLLVFPLVAVVRTLNGRWHRCTRLVDRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDVPVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKPAVTIVIHAPVDPAVEGVEGAMRSARAAIASGLPRYEHVSGAMAATRNQLSAAAACGRGSXXXXXXXXXXXXXXXXLARQARSHRIRWLALPLADVFYQMSTALTQCSTHRAKPCQGREQQGFVRACCIVATANAAALGGGSDXXXXXXIXXCSGGVCLRPCTRPRPGKYPSQQRRKSFVYRWQYGTAFAAHLTVAVPGWRQCGAVMARAATAAAMPVATA Sbjct: 1 MLMSRRAAQVALLCTILSCTRLSALQLPRAVRLGSVQHVSHHSSFAGCSASLPLRFGLQSCWRTTNVPLRASAAAPIPDENSGATQRKWEAAAPAQQESRPVVKTGLHVNIAGRALNAYGLLYAITSTLTGLLVFPLVAVVRTLNGRWHRCTRLVDRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDVPVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKPAVTIVIHAPVDPAVEGVEGAMRSARAAIASGLPRYEHVSGAMAATRNQLSAAAACGRGSXXXXXXXXXXXXXXXXLARQARSHRIRWLALPLADVFYQMSTALTQCSTHRAKPCQGREQQGFVRACCIVATANAAALGGGSDXXXXXXIXXCSGGVCLRPCTRPRPGKYPSQQRRKSFVYRWQYGTAFAAHLTVAVPGWRQCGAVMARAATAAAMPVATA 545
BLAST of jgi.p|Trimin1|335503 vs. uniprot
Match: A0A6H5JIL0_9PHAE (PlsC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIL0_9PHAE) HSP 1 Score: 231 bits (589), Expect = 8.960e-67 Identity = 125/272 (45.96%), Postives = 175/272 (64.34%), Query Frame = 1 Query: 289 QESRPVVKT------GLHVNIAGRALNAYGLLYAITSTLTGLLVFPLVAVVRTLNGRWHRCTRLVDRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDVPVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKP-AVTIVIHAPVDPAVEGVEGAMRSARAAIASGLPRYE 1083 Q+ P +T G H+ I + +N YGLL+A + T LL+FPL + + + D +R+R + +W RL+L +MG+RPKVEG LPP E VVF+ NH S+LD+PVT LPR+ KYL KAEL W+P++GWKAVLA DI V R ++FR+L+ + +L+AGN ++ FPEGTRSR G L FK+GPF MAQ+AGVRVVP++I GV E MPP A+APL KP +V +V+H + + V+ + AR A++ GL ++ Sbjct: 24 QDGSPSTRTFDRSNLGFHLKIGSKVINMYGLLFATQAWFTALLMFPLCLLSALVAP-------IFDWRRMRPPTAVAVLWGRLALWNMGVRPKVEGAELLPPRGEAVVFVANHGSYLDIPVTNCLPRMCKYLMKAELLWLPIVGWKAVLARDIFVHRGTSTTFRQLLRSTTRTLKAGNSIMTFPEGTRSRDGRLGKFKRGPFTMAQQAGVRVVPLTITGVTEAMPPFAMAPLCKPRSVRLVVHPAISTEGKPVKDLIAEARKAVSDGLEDWQ 288
BLAST of jgi.p|Trimin1|335503 vs. uniprot
Match: A0A7S2UXA9_9STRA (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXA9_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.140e-45 Identity = 110/263 (41.83%), Postives = 152/263 (57.79%), Query Frame = 1 Query: 304 VVKTG-LHVNIAGRALNAYGLLYAITSTLTGLLVFPLVAVVRTLNGRWHRCTRLVDRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDV-PVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKPAVTIV-IHAPVDPAVEGVEGAMRSARAAIASGLPRYE 1083 VVK G L + G+A+ GL Y + L L +P + W C DR + S+W RLS+LSM +PKVEGL NLPP ETVVF+ NH SFLD+ ++GFLPR KY++K E+ +PLIGW AG I ++RA +S ++ DA SL+ GN + FPEG+R+R G + P KKGPF +A++AGVR+VP+S+ + PP A PL P ++ IH P++ + M R AI SGLP ++ Sbjct: 91 VVKPGPLRIMFKGKAITFTGLCYLFWAFLWCGLSYPFLVPF------WVWCLAF-DRNCRCLVDEVVSIWARLSMLSMFYKPKVEGLENLPPKDETVVFMANHQSFLDIFTLSGFLPRRFKYISKVEILRIPLIGWAMNFAGHIAIQRASVASQIQVFRDAIKSLKDGNSVCIFPEGSRTRDGRMLPLKKGPFTIAKRAGVRIVPVSLGELFRYNPPSAWLPLGIPKDAVLKIHPPIETKGKSEAEVMELVRIAINSGLPDWQ 346
BLAST of jgi.p|Trimin1|335503 vs. uniprot
Match: A0A7S3Y5W9_HETAK (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5W9_HETAK) HSP 1 Score: 175 bits (444), Expect = 3.490e-45 Identity = 115/278 (41.37%), Postives = 159/278 (57.19%), Query Frame = 1 Query: 271 AAAPAQQ--ESRPVVKTGLHVNIAG--RALNAYGLLYAITSTLTGLLVFPLVAVVRTLNGRWHRCTRLVDRKRLRVASWFGSVWCRLSLLSMGIRPK-VEGLHNLPPPTETVVFLPNHTSFLDV-PVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKPA-VTIVIHAPVDPAVEGVEGAMRSARAAIASGLPRYE 1083 AAAP +Q E + +V G+H+ + R LN G + + LT L+FP L+ W DR+R R W +LS+LS+ RPK + G +LP E V++L NHTSFLD+ ++GFLPR KY++K E+ +PLIGW +A I VRR D+ S + SL+ GN + FPEGTR+++G + FKKGPF +A+KAG RVVPIS+ V + P A+ PL +P V +VIH P+DP M A AAI SGLP ++ Sbjct: 69 AAAPLEQSVEGQQLVPYGIHMKLGKKKRILNITGFFFLFNTMLTCALLFPFTV----LSYLWAMA---FDRRRRRAVDNCVHWWAKLSMLSVFYRPKEIVGAEHLPDDAEGVLYLANHTSFLDILTLSGFLPRNFKYVSKVEILKIPLIGWAMQMAAHIAVRRMDRRSQIETVKSTIQSLKDGNSVTMFPEGTRTKTGRMGDFKKGPFTIAKKAGARVVPISLCNVTKWFPSWAVMPLGRPTDVRVVIHPPIDPKDLTEAELMERAFAAIESGLPDFQ 339
BLAST of jgi.p|Trimin1|335503 vs. uniprot
Match: A0A7S0NMH9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NMH9_9EUKA) HSP 1 Score: 171 bits (432), Expect = 3.830e-44 Identity = 96/206 (46.60%), Postives = 127/206 (61.65%), Query Frame = 1 Query: 466 DRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDV-PVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKP-AVTIVIHAPVDPAVEGVEG-AMRSARAAIASGLP 1074 D R R W +W R +L MG + VEG NLPPP E V+++PNH SFLD+ ++G LPR KY++K E+ +PLIGW A I +RR D++S +A A L+ G+ LV FPEGTRS+ G + FKKGPF MA +A VRVVPISI G PP +L PL++P V +++H P+DP E + A+AAI S LP Sbjct: 108 DHVRRRACDWVVQLWARWTLALMGSKVSVEGKENLPPPEEAVLYVPNHCSFLDIFSLSGCLPRRFKYVSKVEILRIPLIGWAMQFAKHIAIRRTDRASQLATFKEAVACLQGGSSLVTFPEGTRSKDGRIMAFKKGPFTMAARAKVRVVPISIIGTHVFQPPGSLFPLARPRGVRLIVHPPLDPPANKKEQETLEQAKAAIMSALP 313
BLAST of jgi.p|Trimin1|335503 vs. uniprot
Match: A0A7S4B0Q0_CHRCT (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B0Q0_CHRCT) HSP 1 Score: 170 bits (430), Expect = 8.520e-44 Identity = 99/209 (47.37%), Postives = 132/209 (63.16%), Query Frame = 1 Query: 466 DRKRLRVASWFGSVW--CRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDV-PVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKP-AVTIVIHAPVD-PAVEGVEGAMRSARAAIASGLPR 1077 DR R R W +W C LSLL IR VEGL NLPP E V+++PNH SFLD+ ++G+LPR KY++K E+ +P IGW A I ++R D++S + + DA L+AG+ LV FPEGTRS+ G L FKKGPF MA KA VRVVPISI G PP + P+++P V +V+H P+D P + + + ARAA+ S LP+ Sbjct: 118 DRSRRRACDWIVQIWARCTLSLLFSDIR--VEGLENLPPRDEAVMYVPNHCSFLDIFALSGYLPRRFKYISKIEILRIPFIGWAMQFAKHIAIKRMDRASQVQTVRDAVDCLKAGSSLVTFPEGTRSKDGRLMEFKKGPFSMAAKAQVRVVPISIIGTHLFQPPGSAFPMARPRGVKLVVHPPLDAPGKKKEQETLEQARAAVLSALPK 324
BLAST of jgi.p|Trimin1|335503 vs. uniprot
Match: A0A7S4JRU4_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JRU4_9EUKA) HSP 1 Score: 169 bits (429), Expect = 9.840e-44 Identity = 103/241 (42.74%), Postives = 142/241 (58.92%), Query Frame = 1 Query: 358 GLLYAITSTLTGLLVFPLVAVVRTLNGRWHRCTRLVDRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDV-PVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKP-AVTIVIHAPV-DPAVEGVEGAMRSARAAIASGL 1071 GL +AI + L+V+P + + + VD+KR R W W RL+L++M VEG+ NLPP E V++ PNH SFLD+ ++G+L R KY++K E+ +PLIGW A I +RR+D++S + + DA A L G+ LV FPEGTRS+ G L FKKGPF MA +AGVRVVPISI G PP +L+P S P + IV+H + P + + + RAAI S L Sbjct: 83 GLWFAIACFSSALIVYPPLICITIASI-------FVDKKRRRYNDWIVQAWARLTLIAMRASVTVEGIENLPPYNEAVLYAPNHCSFLDIFALSGYLGRRFKYVSKIEILRIPLIGWAMQFAKHIAIRRSDRASQMQTLKDAIACLSDGSSLVTFPEGTRSKDGRLLDFKKGPFTMASRAGVRVVPISIIGTHVYQPPSSLSPYSWPRGIRIVVHPALPSPPAKKEQETLELTRAAIESAL 316
BLAST of jgi.p|Trimin1|335503 vs. uniprot
Match: A0A7S0Q290_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q290_9EUKA) HSP 1 Score: 166 bits (421), Expect = 1.080e-42 Identity = 91/184 (49.46%), Postives = 116/184 (63.04%), Query Frame = 1 Query: 466 DRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDV-PVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKPA-VTIVIHAPVDP 1011 D R R W W R++L MG R VEG+ NLPPP E V++ PNH SFLD+ ++G LPR KY++K E+ +PLIGW A I +RR D++S DA A L+ G+ LV FPEGTRS+ G +A FKKGPF MA +A VRVVPISI G PP + PL++P V IV+H P+ P Sbjct: 103 DNVRRRGCDWVVQYWARVTLALMGSRVTVEGVENLPPPEEAVLYAPNHCSFLDIFALSGCLPRRFKYVSKIEILRIPLIGWAMQFAKHIAIRRTDRASQLATFKDAVACLQGGSSLVTFPEGTRSKDGRIADFKKGPFTMAARAQVRVVPISIIGTHVFQPPGSAVPLARPTGVRIVVHPPLPP 286
BLAST of jgi.p|Trimin1|335503 vs. uniprot
Match: R1E6C8_EMIHU (PlsC domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E6C8_EMIHU) HSP 1 Score: 167 bits (422), Expect = 1.210e-42 Identity = 121/335 (36.12%), Postives = 177/335 (52.84%), Query Frame = 1 Query: 148 ASLPLRFGLQSCWRTTNVPLR-ASAAAPIPDENSGATQRKWEAAAPAQQESRPVVKTGLHVNIAGRALNAYGLLYAITSTLTGLLVFPLVAVVRTLNGRWHRCTRLVDRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDV-PVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVA-------EVMPPRA---------------LAPLSKP-AVTIVIHAPVD-PAVEGVEGAMRSARAAIASGLP 1074 A LPL GL + R PL A+ A P+ A+ +AAA + V+ N R + +G+ +A+ + ++PLV + T+ + L D +R R + W R +L G + +EG NLPPP E V+++PNH SFLD+ ++GFLPR KY++K E+ +PL+GW A I + R D+ S + + +A +L+AGN LV FPEGTRS+ G L FKKGPF MA +AGVR+VPIS+ G A PPR+ P++ P V I++H P+D P + + +M +ARAA+ SGLP Sbjct: 6 ACLPL--GLATAPRAPPSPLAMATMAPPLARVAMSASAVNLDAAAVDAAAAAAVLPPTPKTNAVSRKV--FGITFALLTAFVVTGIYPLV-ISATIYSK------LFDNERRRANDYVVQWWARTTLTLFGAKVALEGQENLPPPGEAVMYVPNHCSFLDIFSLSGFLPRRFKYISKIEILRIPLVGWAMGFAKHIALARTDRKSQLKTLKEAVETLKAGNSLVTFPEGTRSKDGVLGSFKKGPFTMAARAGVRIVPISVVGAAARDLAYSSATPPRSRLGTFPVGTHVFGTGALPIAIPRGVRIIVHPPLDAPVAKQEDESMAAARAAVLSGLP 329
BLAST of jgi.p|Trimin1|335503 vs. uniprot
Match: A0A7S3K3P6_9STRA (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3P6_9STRA) HSP 1 Score: 165 bits (417), Expect = 4.460e-42 Identity = 97/242 (40.08%), Postives = 145/242 (59.92%), Query Frame = 1 Query: 256 QRKWEAAAPAQQESRPVVKTG-LHVNIAGRALNAYGLLYAITSTLTGLLVFPLVAVVRTLNGRWHRCTRLVDRKRLRVASWFGSVWCRLSLLSMGIRPKVEGLHNLPPPTETVVFLPNHTSFLDV-PVTGFLPRLVKYLTKAELAWMPLIGWKAVLAGDILVRRADKSSFRRLIADASASLRAGNCLVAFPEGTRSRSGALAPFKKGPFLMAQKAGVRVVPISIAGVAEVMPPRALAPLSKP 975 Q+K EAAA A ++ G L + I + +N GL + ++ TL + ++PLV L+ ++ D+KR R + S+W R S+L+ G RPK+ G+ NLP E V+++PNHTS+LD+ ++GFL R KY++K E+ +PLIGW AG + ++R D+ S A SL GN +VAFPEGTR+ +G L FK+GPF MA A V ++PI+I + + PP AL PL++P Sbjct: 43 QKKVEAAAVAYEDESLGPSVGPLSIKIGKKDVNLAGLFFGLSMTLWVITLYPLVLACALLS-------QIFDKKRRRAMDFIVSLWARFSMLTCGYRPKLIGVENLPLLKEAVLYVPNHTSYLDILTLSGFLKRPFKYISKIEILRIPLIGWAMGFAGHVALKRTDRRSQLETFKAAVESLSNGNSIVAFPEGTRALNGKLQKFKRGPFKMATAANVDIIPIAICDLHKWHPPSALLPLARP 277 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|335503 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2863 ID=mRNA_2863|Name=jgi.p|Trimin1|335503|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2008bp|location=Sequence derived from alignment at Contig_8:1393673..1398799+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGATGAGCAGGCGCGCTGCGCAAGTCGCTCTGCTGTGCACGATCCTback to top protein sequence of jgi.p|Trimin1|335503 >Trimin1|335503|MIX44266_55_35 ID=Trimin1|335503|MIX44266_55_35|Name=jgi.p|Trimin1|335503|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=546bp MLMSRRAAQVALLCTILSCTRLSALQLPRAVRLGSVQHVSHHSSFAGCSAback to top mRNA from alignment at Contig_8:1393673..1398799+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2863 ID=mRNA_2863|Name=jgi.p|Trimin1|335503|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5127bp|location=Sequence derived from alignment at Contig_8:1393673..1398799+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_8:1393673..1398799+ >mRNA_2863 ID=mRNA_2863|Name=jgi.p|Trimin1|335503|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1638bp|location=Sequence derived from alignment at Contig_8:1393673..1398799+ (Tribonema minus UTEX_B_3156 )back to top |