mRNA_2649 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|158804
Unique NamemRNA_2649
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|158804 vs. uniprot
Match: A0A835YP98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP98_9STRA)

HSP 1 Score: 536 bits (1380), Expect = 1.790e-192
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1 
Query:    1 MPRKLPDLLSKFPKIEPLTSRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIFDPETDQLFDDLGVKVFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEVAGFVSRPEFERLYALYTHGKHGYLFADMIENRLSDSF 804
            MPRKLPDLLSKFPKIEPLTSRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIFDPETDQLFDDLGVKVFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEVAGFVSRPEFERLYALYTHGKHGYLFADMIENRLSDSF
Sbjct:    1 MPRKLPDLLSKFPKIEPLTSRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIFDPETDQLFDDLGVKVFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEVAGFVSRPEFERLYALYTHGKHGYLFADMIENRLSDSF 268
[Close]
BLAST of jgi.p|Trimin1|158804 vs. uniprot
Match: A0A835YZW4_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW4_9STRA)

HSP 1 Score: 264 bits (674), Expect = 2.470e-83
Identity = 135/249 (54.22%), Postives = 177/249 (71.08%), Query Frame = 1 
Query:   58 SRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIFDPETDQLFDDLGVKVFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEVAGFVSRPEFERLYALYTHGKHGYLFADMIENRLSDSF 804
            SRYLSR+P I T VG TGSGK++   ALI+LM+RE +ITHLFIISPTA+SNT+Y+ I   + D+L+ D+G  VF +L +I  +   IAD Y   L Y +A  ++  GE V+  DE LLE  G+  +  +RPSF L  DD Q SAIFSR   N FPNLVLRSRH A GLG SI MAAQT+++GVPR+LR NSTH++ FK+ +  E++ +YEEV+GF S+ EFERL+  YT+  HGYLFAD+    L+++F
Sbjct:  148 SRYLSRIPAIVTLVGHTGSGKSYLATALIQLMQREGTITHLFIISPTANSNTLYQNIVKTD-DKLYSDIGPAVFKSLEEIVASCEAIADVYRKDLEYCIALAKYTSGEPVTYFDEALLEARGFMPVVPKRPSFCLFCDDCQGSAIFSRGSRNSFPNLVLRSRHVAGGLGLSIIMAAQTIRSGVPRALRLNSTHWVFFKSLNRMEVEQMYEEVSGFCSKGEFERLFNWYTNEPHGYLFADLPRQLLTNTF 395
[Close]
BLAST of jgi.p|Trimin1|158804 vs. uniprot
Match: A0A835Z5J4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J4_9STRA)

HSP 1 Score: 253 bits (647), Expect = 2.110e-81
Identity = 126/235 (53.62%), Postives = 168/235 (71.49%), Query Frame = 1 
Query:   73 RVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIFDPETDQLFDDLGVKVFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEVAGFVSRPEFERLYALYTHGKHGYLFADM 777
            R+P I T VG TGSGK++   ALI++M+RE +ITHLFIISPTA+SNT+Y  +  P+ D+++ D+G  VF +L +I  +   +AD Y   L Y +A  ++  GE V+  DE LLE  GY  +  +RPSF L  DD Q SAIFSR   N FPNLVLRSRH A GLG SI MAAQT+++GVPR+LR NSTH+++FK+ +  E++ +YEEV+GF S+ EFERL+  YT+  HGYLFAD+
Sbjct:    1 RIPAIVTLVGHTGSGKSYLATALIQMMQREGTITHLFIISPTANSNTLYSNVLKPD-DKVYSDIGPAVFKSLEEIVASCEAVADVYRKDLEYCIALAKYTSGEPVTYFDEALLEARGYMPVVPKRPSFCLFCDDCQGSAIFSRGSKNSFPNLVLRSRHVAGGLGLSIIMAAQTIRSGVPRALRLNSTHWVLFKSLNRMEVEQMYEEVSGFCSKGEFERLFNWYTNEPHGYLFADL 234
[Close]
BLAST of jgi.p|Trimin1|158804 vs. uniprot
Match: A0A835YS37_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS37_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.180e-72
Identity = 128/268 (47.76%), Postives = 176/268 (65.67%), Query Frame = 1 
Query:    7 RKLPDLLSKFPKIEPLTSRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIFDPE-TDQLFDDLGVK-VFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEVAGFVSRPEFERLYALYTHGKHGYLFADMIENRLSDSF 804
            RKLPDL S+FPK++P+TS+Y+S++P I T      +GK++  VALI LM+RE SITH +I+SPTA SN+IYR I   E  D++ DDL    V++TL+ IQ  M  I   Y+  L+YA+    +  G  V+  DE LL+  GY   A R+PS+ +L+DDAQ S + SR   N   N  LR RH AR  G S  + +QT+K G+P+++RTN+TH+  FKT +  E++  Y+EV+GF  + EFERL  LYT  K GYLFAD+   RLS+SF
Sbjct:    2 RKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALISLMQREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMAR-FGVSFVLVSQTVK-GLPKAIRTNTTHWAFFKTLNKKEIEECYDEVSGFCEQHEFERLLRLYTLQKFGYLFADIPRQRLSNSF 267
[Close]
BLAST of jgi.p|Trimin1|158804 vs. uniprot
Match: A0A835YL54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL54_9STRA)

HSP 1 Score: 231 bits (590), Expect = 2.440e-72
Identity = 124/269 (46.10%), Postives = 179/269 (66.54%), Query Frame = 1 
Query:    1 MPRKLPDLLSKFPKIEPLTSRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIFDPETDQLFDDLGVKVFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFK-TCSASEMDSLYEEVAGFVSRPEFERLYALYTHGKHGYLFADMIENRLSDSF 804
            M RK  DLL    K+EPLTSR +SRVP +C AVG TG+GK++ +V LIK M+ E++IT LFIISPTA SNTIY+ I   E D+++DDL  K++ +L +I+      A  Y  +L+ A A+ R+  G  +   D QLLE+ G+R++  +RP+FA+  DD  +SA+FS  + N + N  LR RH   GLG S+FM +QTM++GVP++LR N+THF     + +  E++S++E V+ FVS  +FER   L+T   HGYLF D+I+  LS+ +
Sbjct:    1 MKRKDIDLLKDIAKVEPLTSRVVSRVPCLCIAVGHTGAGKSWKIVELIKRMQMERTITRLFIISPTAASNTIYKNIVR-EGDRVYDDLSPKIYASLEEIESVCKSEAYVYAHELKCAAAYLRYANGLPLDYPDTQLLEQIGWRQMIPKRPAFAVFADDCSHSALFSTSRKNPWSNFCLRCRHAGNGLGDSVFMVSQTMRSGVPKALRENATHFFYVGGSMNRKEVESMWETVSSFVSFDDFERKLRLFTLENHGYLFCDLIKKTLSNRY 268
[Close]
BLAST of jgi.p|Trimin1|158804 vs. uniprot
Match: A0A835YYT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYT5_9STRA)

HSP 1 Score: 215 bits (547), Expect = 2.120e-64
Identity = 116/268 (43.28%), Postives = 167/268 (62.31%), Query Frame = 1 
Query:    4 PRKLPDLLSKFPKIEPLTSRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIFDPETDQLFDDLGV-KVFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEVAGFVSRPEFERLYALYTH-GKHGYLFADMIENRLSDS 801
            PR LPD+ +    +  L SRYLSR+PTIC  VG TGSGKT+  ++L+KL+RRE ++  ++++SPT  SN +Y+++     D +F      +++  L  I+  +   AD +  ++ Y +A  +   G+ ++  +  LLE  G+RKI  RRP  AL+IDDAQ S +FS    N    LVLR RH   G+G SIF+ AQT + GVPRSLR N TH  ++ T +A E+D LY E  GFVSR EFERL+ LYT   +H ++  D+ E +L+DS
Sbjct:  116 PRALPDITAGLNMLPALESRYLSRLPTICGFVGSTGSGKTYLCLSLLKLLRREGTLDTVYLVSPTGASNVLYKSVIREGKDHVFTKPNSPQIWKDLEWIEGDVQAQADRWRDEMEYDIAHRKHTAGQTLNPHETNLLERFGFRKIVPRRPCPALVIDDAQGSLLFSPSPRNYLSQLVLRCRHVGGGVGLSIFLVAQTSR-GVPRSLRCNFTHLFLYSTHNAKELDVLYHESGGFVSREEFERLFRLYTATSRHAFMKVDLYERQLTDS 382
[Close]
BLAST of jgi.p|Trimin1|158804 vs. uniprot
Match: A0A835ZKI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKI0_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.910e-64
Identity = 113/251 (45.02%), Postives = 158/251 (62.95%), Query Frame = 1 
Query:   52 LTSRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIFDPETDQLFDDLGVKVFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEVAGFVSRPEFERLYALYTHGKHGYLFADMIENRLSDSF 804
            L S+YLSRVPTI  A+  TG GK+F  + LI++MR E SI  +F+ISPTA SN+IY+AI  PE D+ +D L    F  ++++       A  Y   L Y +A+++FV GE +S  +E LLE GG+R+I  +RPS AL++DD Q S + S+   N   NLVL+SRH   GLG SIF   QT+  G P+ +R N TH+ ++KT S  E   +YE + G +S  EF+R   LYT   H YLF D+  ++++DSF
Sbjct:    4 LESKYLSRVPTIFCALASTGGGKSFTTINLIRMMRAEGSINKVFLISPTADSNSIYKAILTPE-DKTWD-LDKNAFQHIQEVVQECEADAAKYRHDLEYEIAYKKFVSGETISHVEENLLETGGFREIKPKRPSPALVLDDIQGSILMSQSARNPLVNLVLKSRHIGEGLGLSIFFMVQTL-TGCPKPIRLNVTHWAIWKTHSTREQKLIYESLGGMMSEEEFQRKLHLYTLAPHSYLFVDLWADKIADSF 251
[Close]
BLAST of jgi.p|Trimin1|158804 vs. uniprot
Match: A0A835ZBD4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD4_9STRA)

HSP 1 Score: 208 bits (529), Expect = 1.500e-57
Identity = 105/219 (47.95%), Postives = 147/219 (67.12%), Query Frame = 1 
Query:  139 LIKLMRREK-SITHLFIISPTAHSNTIYRAIFDPETDQLFDDLGVKVFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEVAGFVSRPEFERLYALYTHGKHGYLFADMIENRL 792
            +++ M+R K +  H     PTA+SNT+Y+ I  P+ D+++ D+G  VF +L +I      + D Y   L YA+A  ++  GE V+  DE LLE+ G+  +  +RPSF L  DD QNSAIFSR   N FPN VLRSRH A GLG S+ +AAQTM++GVPR+LR NSTHF++FKT S  E+D +YEEV+GF S+ EFER +  +T   +GY+FAD+I  ++
Sbjct:   39 VVQDMKRAKFTAAHTINFVPTANSNTLYQNILKPD-DKIYSDIGPNVFKSLDEIVAACEAVGDAYRKDLEYAIAHAKYTNGEPVTYFDEALLEQRGFMPVVPKRPSFCLFCDDCQNSAIFSRGGRNTFPNCVLRSRHVAGGLGLSVILAAQTMRSGVPRALRLNSTHFILFKTHSRVELDEMYEEVSGFCSKGEFERQFNYFTAEPYGYMFADLIRQKV 256
[Close]
BLAST of jgi.p|Trimin1|158804 vs. uniprot
Match: A0A836CIA9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIA9_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.450e-56
Identity = 111/231 (48.05%), Postives = 155/231 (67.10%), Query Frame = 1 
Query:    7 RKLPDLLSKFPKIEPLTSRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIF-DPETDQLFDDLGVK-VFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEV 693
            RKLPDL S+FPK++P+TS+Y+S++P I T      +GK++  VALI LM+RE SITH +I+SPTA SN +YR I  +   D++ DDL    V++TL+ IQ  M GI   YE  L+YA+A  +F  G  V++ DEQLLE  GY     R PS+ +L+DDAQ S + SR K N F N VLR RH AR  G S  + +QT+K G+P+++RTN+TH+  FKT +  E++  Y+E+
Sbjct:    2 RKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALITLMQREGSITHTWILSPTASSNQVYRNIIGEDHLDRVHDDLSAPAVWNTLKAIQAEMEGITAAYEADLKYAIAHHKFNSGAAVNSVDEQLLESRGYMACTPRTPSYCVLVDDAQASPLLSRAKANPFLNAVLRHRHMAR-FGVSFVLVSQTVK-GLPKAVRTNTTHWAFFKTLNKKEIEECYDEI 230
[Close]
BLAST of jgi.p|Trimin1|158804 vs. uniprot
Match: A0A835ZDZ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDZ1_9STRA)

HSP 1 Score: 204 bits (519), Expect = 3.300e-56
Identity = 110/231 (47.62%), Postives = 155/231 (67.10%), Query Frame = 1 
Query:    7 RKLPDLLSKFPKIEPLTSRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIF-DPETDQLFDDLGVK-VFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEV 693
            RKLPDL S+FPK++P+TS+Y+S++P I T      +GK++  VALI LM+RE SITH +I+SPTA SN+IYR I  +   D++ DDL    V++TL+ IQ  M GI   YE  L+YA+   +F  G  V++ DEQLLE  GY     R PS+ +L+DDAQ S + SR K N F N +LR RH AR  G S  + +QT+K G+P+++RTN+TH+  FKT +  E++  Y+E+
Sbjct:    2 RKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALITLMQREGSITHTWILSPTASSNSIYRNIIGEDHLDRVHDDLSAPAVWNTLKAIQTEMEGITAQYEADLKYAIVHHKFNSGAAVNSVDEQLLESRGYMPCTPRTPSYCVLVDDAQASPLLSRAKANPFLNAILRHRHMAR-FGVSFVLVSQTVK-GLPKAVRTNTTHWAFFKTLNKKEIEECYDEI 230
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158804 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A835YP98_9STRA1.790e-192100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZW4_9STRA2.470e-8354.22AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z5J4_9STRA2.110e-8153.62Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YS37_9STRA1.180e-7247.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YL54_9STRA2.440e-7246.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYT5_9STRA2.120e-6443.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZKI0_9STRA2.910e-6445.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZBD4_9STRA1.500e-5747.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CIA9_9STRA1.450e-5648.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDZ1_9STRA3.300e-5647.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_7contigContig_7:1647540..1648346 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|158804|e_gw1.7.263.1
Hectar predicted targeting categoryother localisation
TranscriptId159126
TrackFilteredModels1
ProteinId158804
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158804gene_2649Tribonema minus UTEX_B_3156 geneContig_7 1647540..1648346 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2649_1exon_2649_1Tribonema minus UTEX_B_3156 exonContig_7 1647540..1648346 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2649CDS_2649Tribonema minus UTEX_B_3156 CDSContig_7 1647540..1648346 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158804Trimin1|158804|e_gw1.7.263.1Tribonema minus UTEX_B_3156 polypeptideContig_7 1647540..1648346 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2649 ID=mRNA_2649|Name=jgi.p|Trimin1|158804|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=807bp|location=Sequence derived from alignment at Contig_7:1647540..1648346+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCACGTAAACTGCCAGATTTACTCAGCAAATTCCCCAAAATCGAGCC
GTTAACATCGCGATATCTATCACGCGTTCCGACGATTTGCACTGCTGTCG
GTGGAACGGGCAGTGGCAAAACATTCTGTCTGGTGGCGTTGATCAAGCTC
ATGCGGCGGGAAAAATCGATAACACACTTGTTCATCATCAGTCCGACTGC
GCACAGCAACACGATATACCGGGCAATTTTCGACCCGGAAACAGACCAAC
TGTTCGACGATCTCGGAGTGAAAGTCTTCGATACCCTCCGGCAAATCCAG
GATACGATGAACGGCATCGCAGACGGCTACGAGACACAGCTGCGTTACGC
GCTGGCATTTGAGAGGTTCGTGCGCGGTGAAGATGTTAGTACCACGGATG
AACAGTTGCTGGAGGAAGGAGGGTACCGCAAAATAGCCGTTCGGCGACCG
TCGTTCGCGTTACTCATCGACGACGCCCAGAATTCTGCAATCTTTTCGAG
GCATAAAAATAACGGTTTTCCGAACCTTGTGCTCCGCTCGAGGCACTGCG
CGAGAGGCCTTGGATGCTCAATTTTCATGGCCGCGCAGACGATGAAGAAC
GGCGTTCCCCGCAGCCTACGTACCAACAGCACTCACTTTATGATGTTCAA
GACGTGCAGTGCTTCGGAAATGGACAGTTTATATGAGGAAGTCGCCGGAT
TCGTGTCCAGACCGGAGTTTGAGCGTCTGTATGCGCTGTACACTCACGGA
AAACACGGGTACCTGTTCGCTGATATGATCGAAAATAGACTCTCCGATTC
ATTTTAA
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protein sequence of jgi.p|Trimin1|158804

>Trimin1|158804|e_gw1.7.263.1 ID=Trimin1|158804|e_gw1.7.263.1|Name=jgi.p|Trimin1|158804|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=269bp
MPRKLPDLLSKFPKIEPLTSRYLSRVPTICTAVGGTGSGKTFCLVALIKL
MRREKSITHLFIISPTAHSNTIYRAIFDPETDQLFDDLGVKVFDTLRQIQ
DTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRP
SFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKN
GVPRSLRTNSTHFMMFKTCSASEMDSLYEEVAGFVSRPEFERLYALYTHG
KHGYLFADMIENRLSDSF*
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mRNA from alignment at Contig_7:1647540..1648346+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2649 ID=mRNA_2649|Name=jgi.p|Trimin1|158804|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=807bp|location=Sequence derived from alignment at Contig_7:1647540..1648346+ (Tribonema minus UTEX_B_3156 )
ATGCCACGTAAACTGCCAGATTTACTCAGCAAATTCCCCAAAATCGAGCC
GTTAACATCGCGATATCTATCACGCGTTCCGACGATTTGCACTGCTGTCG
GTGGAACGGGCAGTGGCAAAACATTCTGTCTGGTGGCGTTGATCAAGCTC
ATGCGGCGGGAAAAATCGATAACACACTTGTTCATCATCAGTCCGACTGC
GCACAGCAACACGATATACCGGGCAATTTTCGACCCGGAAACAGACCAAC
TGTTCGACGATCTCGGAGTGAAAGTCTTCGATACCCTCCGGCAAATCCAG
GATACGATGAACGGCATCGCAGACGGCTACGAGACACAGCTGCGTTACGC
GCTGGCATTTGAGAGGTTCGTGCGCGGTGAAGATGTTAGTACCACGGATG
AACAGTTGCTGGAGGAAGGAGGGTACCGCAAAATAGCCGTTCGGCGACCG
TCGTTCGCGTTACTCATCGACGACGCCCAGAATTCTGCAATCTTTTCGAG
GCATAAAAATAACGGTTTTCCGAACCTTGTGCTCCGCTCGAGGCACTGCG
CGAGAGGCCTTGGATGCTCAATTTTCATGGCCGCGCAGACGATGAAGAAC
GGCGTTCCCCGCAGCCTACGTACCAACAGCACTCACTTTATGATGTTCAA
GACGTGCAGTGCTTCGGAAATGGACAGTTTATATGAGGAAGTCGCCGGAT
TCGTGTCCAGACCGGAGTTTGAGCGTCTGTATGCGCTGTACACTCACGGA
AAACACGGGTACCTGTTCGCTGATATGATCGAAAATAGACTCTCCGATTC
ATTTTAA
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Coding sequence (CDS) from alignment at Contig_7:1647540..1648346+

>mRNA_2649 ID=mRNA_2649|Name=jgi.p|Trimin1|158804|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=807bp|location=Sequence derived from alignment at Contig_7:1647540..1648346+ (Tribonema minus UTEX_B_3156 )
ATGCCACGTAAACTGCCAGATTTACTCAGCAAATTCCCCAAAATCGAGCC
GTTAACATCGCGATATCTATCACGCGTTCCGACGATTTGCACTGCTGTCG
GTGGAACGGGCAGTGGCAAAACATTCTGTCTGGTGGCGTTGATCAAGCTC
ATGCGGCGGGAAAAATCGATAACACACTTGTTCATCATCAGTCCGACTGC
GCACAGCAACACGATATACCGGGCAATTTTCGACCCGGAAACAGACCAAC
TGTTCGACGATCTCGGAGTGAAAGTCTTCGATACCCTCCGGCAAATCCAG
GATACGATGAACGGCATCGCAGACGGCTACGAGACACAGCTGCGTTACGC
GCTGGCATTTGAGAGGTTCGTGCGCGGTGAAGATGTTAGTACCACGGATG
AACAGTTGCTGGAGGAAGGAGGGTACCGCAAAATAGCCGTTCGGCGACCG
TCGTTCGCGTTACTCATCGACGACGCCCAGAATTCTGCAATCTTTTCGAG
GCATAAAAATAACGGTTTTCCGAACCTTGTGCTCCGCTCGAGGCACTGCG
CGAGAGGCCTTGGATGCTCAATTTTCATGGCCGCGCAGACGATGAAGAAC
GGCGTTCCCCGCAGCCTACGTACCAACAGCACTCACTTTATGATGTTCAA
GACGTGCAGTGCTTCGGAAATGGACAGTTTATATGAGGAAGTCGCCGGAT
TCGTGTCCAGACCGGAGTTTGAGCGTCTGTATGCGCTGTACACTCACGGA
AAACACGGGTACCTGTTCGCTGATATGATCGAAAATAGACTCTCCGATTC
ATTTTAA
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