mRNA_256 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157670 vs. uniprot
Match: A0A835Z102_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z102_9STRA) HSP 1 Score: 868 bits (2243), Expect = 0.000e+0 Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 1 Query: 1 MLLTSTLRVPDTAATRQALTVTQKALSALAQPSTLVAYEVLEPGWLAVPKQYGLQNFSDVDDRQTQAETVVVPPSLAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVHGCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINLLQKPSAAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRLGTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHARNELRS 1347 MLLTSTLRVPDTAATRQALTVTQKALSALAQPSTLVAYEVLEPGWLAVPKQYGLQNFSDVDDRQTQAETVVVPPSLAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVHGCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINLLQKPSAAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRLGTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHARNELRS Sbjct: 1 MLLTSTLRVPDTAATRQALTVTQKALSALAQPSTLVAYEVLEPGWLAVPKQYGLQNFSDVDDRQTQAETVVVPPSLAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVHGCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINLLQKPSAAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRLGTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHARNELRS 449
BLAST of jgi.p|Trimin1|157670 vs. uniprot
Match: A0A835YY40_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY40_9STRA) HSP 1 Score: 466 bits (1200), Expect = 2.200e-159 Identity = 251/447 (56.15%), Postives = 324/447 (72.48%), Query Frame = 1 Query: 1 MLLTSTLRVPDTAATRQALTVTQKALSALAQPSTLVAYEVLEPGWLAVPKQYGLQNFSDVDDRQTQAETVVVPPSLAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVHGCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINLLQKPSAAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRLGTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHARNEL 1341 M+LT+T+RVPDT R ALT+ QK LSAL+ P TL+A+ E GWL VPK +GLQ + +VDDRQ V P L+V +LR HQ A A+ +A + GGG +L LPCG+GKT+TA+ +A+R+GVR LI+ +T VL QW+A IA+ VP AV+G ++QN F VDG THV+ASLKS+A R YP HGCGL +DEAHHI+A L+S+A+A GTRWRLGLSATP RADGLS ++ WS+GP + R GLRV+A+ ++ PV+T + + G+ VAN +GM+NLL K S AA RQ LVA WIRLC SKGRKVLVL+DR+ LL+DLS ++G +FGF+ GA + ++R AAA A ++ ++ AEG D P LDT+ L TPRSG++V+TQVVGRLLR GG+SPLV+DFVDDV LF GM KR +VYR L A+VT YD RNE+ Sbjct: 1 MILTTTVRVPDTPEVRAALTLQQKELSALSAPGTLIAFSTEEAGWLEVPKMWGLQRY-EVDDRQGPHIAVTTAP-LSV-TLRPHQAAALTAIESAFAA-EHGGGGVLVLPCGFGKTMTAIALAQRMGVRCLIVCHTGVLMEQWRAAIAQFVPDAVIGEMQQNKFVVDGCTHVIASLKSVALRDYPPHGCGLLCIDEAHHISALLLSKAVAKLGTRWRLGLSATPTRADGLSPFMTWSLGPTLFEQEREAKTGLRVFAVRVT---TGPVKTKTLRRAGKEVANISGMMNLLVKKSVAATRRQELVAAWIRLCASKGRKVLVLADRLELLRDLSKQMGEFSFGFMTGAVKVKDRAAAAEAQILLGTYGVVAEGFDEPRLDTVVLTTPRSGQSVMTQVVGRLLRDGGKSPLVIDFVDDVPLFVGMHWKRMKVYRKLQASVTCYDEQRNEV 440
BLAST of jgi.p|Trimin1|157670 vs. uniprot
Match: A0A835ZFL4_9STRA (EsV-1-66 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFL4_9STRA) HSP 1 Score: 403 bits (1035), Expect = 4.020e-134 Identity = 245/468 (52.35%), Postives = 307/468 (65.60%), Query Frame = 1 Query: 4 LLTSTLRVPDTAATRQA-----LTVTQKALSALAQPSTLVAYEV---LEPGWLAVPKQYGLQNFS-----DVDDRQTQA-----ETVVVPPSLAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVH--GCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINLL-QKPSAAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRL-GTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHARNEL 1341 +LT+ +RVP T + Q+ LTV QKALS L+ P TL+AY + L L VPK +GL N V+D Q + E VV A+ LR HQV+ATE++M A ++ GGG +L LPCGYGKTVTAL VA ++GVR LI+ +T VL QW A I + P A VG IKQN F+VD THV+ASLKSLA R Y + GC L IVDEAHH+ A +SRA+A+ G ++RLGLSATP R DGLS +L WSIG + Y + R A LRV+A+ + PVRT I +GG+ V+N AGMINLL +A A+ RQ + A WI LC SK RK++VL+DRISLL+DL R+ + T F+ GAA+K ER AA A V+ AS+ AAEGLD+P LDTL L TPRSGE VITQ VGR+ R GR PLV+D VD V LF MF KR RVY+ LGA +T+YD R+ + Sbjct: 1 MLTTCVRVPFTESAEQSRCVQELTVLQKALSPLSDPGTLIAYNIKDTLHGKVLEVPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVS----AITQLRPHQVEATESIMKAFSKEYGGGG-LLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDG---PVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLP-LDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENRDVI 459
BLAST of jgi.p|Trimin1|157670 vs. uniprot
Match: A0A835YYF9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF9_9STRA) HSP 1 Score: 400 bits (1028), Expect = 2.460e-133 Identity = 237/448 (52.90%), Postives = 297/448 (66.29%), Query Frame = 1 Query: 49 QALTVTQKALSALAQPSTLVAYEVLEPGW---LAVPKQYGLQNF-----SDVDDRQ-----TQAETVVVPPSLAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVH--GCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINLLQKPS-AAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRL-GTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHARNEL 1341 Q LTV QK LS L+ P TLVAY + + L VPK +GL+N + V+DRQ Q + VV + LR HQV+A +A+M A ++ + GGG +L LPCGYGKTVTAL VA ++GVR LI+ +T VL +QW A I + P A VG IKQN F V+ THV+ASLKSLA R Y + GC L + DE HHIAA +SRA+A+ G R+RLGLSATP R DGLS +L WSIG + Y + R A LRVYA+ L PV T + K G+ V+N AGMINL+ S + A+ RQ + A WI LC KGR ++VL+DRISLL+DL R+ T T GF+IGAA+K EREAA +A V+ AS+ AAEGLD+ LDTL +TPRSGE VITQ+VGR+ R GR PL++DFVD V LF GMF KR RVY LGA +T+YD R + Sbjct: 2 QELTVVQKELSPLSDPGTLVAYAIRDTFHGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVS----TITQLRPHQVEAADAIMKAFSQ-EYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDG---PVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDL-KLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMRQVI 440
BLAST of jgi.p|Trimin1|157670 vs. uniprot
Match: A0A835YWZ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ8_9STRA) HSP 1 Score: 390 bits (1003), Expect = 2.830e-129 Identity = 226/441 (51.25%), Postives = 292/441 (66.21%), Query Frame = 1 Query: 49 QALTVTQKALSALAQPSTLVAYEVLEPGWLAVPKQYGLQNF-----SDVDDRQTQAETVVVPPSLA-VESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVH--GCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINLLQKPSAA-AEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRL-GTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHARNEL 1341 Q LTV QKALSALA P TLVAY + L VPK +GL N S V+DRQ + ++ ++ + LR HQ++AT+ ++ A + GGG +L LPCGYGKT+TAL V ++ ++ L++ +T VL QW IA+ P A VG I+QN V TH++ASLKSLA R Y + GC + +VDE H AA +SRA+++ G R+RLGLSATP R DGLS +L WSIG + Y + R A LRVYA+ L PV I KGG+ ++N AGMINLL + A A+ RQ + A WI LC SKGRK+++LSDRI LL+DL R+ T T GF+IG A+K ER AA + V+ AS+ AAEGLDI S+DTL L++PRSGE VITQ VGR+ R GRSPLV+D VD V F GMF KR RVY++LGA +T+YD ARN + Sbjct: 25 QQLTVQQKALSALADPGTLVAYTI-RGKVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILD---EGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDI-SVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEARNVI 460
BLAST of jgi.p|Trimin1|157670 vs. uniprot
Match: A0A835ZHB6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHB6_9STRA) HSP 1 Score: 382 bits (982), Expect = 1.290e-126 Identity = 217/421 (51.54%), Postives = 271/421 (64.37%), Query Frame = 1 Query: 136 LAVPKQYGLQNFSD----------------VDDRQTQAETVVVPPSLAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVHGCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINL---LQKPSAAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRLGTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHARNEL 1341 + VPK +GL+ + V D Q PP L + +LR HQ +A A+ + L GGG ++ LPCG+GKTV ALE+ RR+GVR I+V+T VL AQWKA IA+ VP A VG I+ + F V+G THV+ASL+S+A R YP HGCGL I DE H +AA +S A+A G R+R+GLSATP RADGL +L W IGP+ + R + LR A+ L P PVRT++I KGG+ V N + M +L +P A RQ L WIRLCV KGRKVLVLSDR++LL DLS RLG T+GF+ G+A+ +R+AA DVI AS+ CAAEGLD+PSLDT+ L+TPRSGEAVITQVVGRL R GG PLV+D VD V LF GM KR R+ R +G TVT D R L Sbjct: 1 MEVPKAWGLERLAGPGGAGARAXXXXXXEAVVDAQPPCAAASTPP-LRLRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPHGCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLD-PG--PVRTISISKGGRRVDNISAMTSLTCDFSEPRAVR--RQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGDYTWGFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELRRPL 415
BLAST of jgi.p|Trimin1|157670 vs. uniprot
Match: A0A835Z7P3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P3_9STRA) HSP 1 Score: 372 bits (955), Expect = 5.250e-122 Identity = 220/458 (48.03%), Postives = 291/458 (63.54%), Query Frame = 1 Query: 19 LRVPDTAATRQA---LTVTQKALSALAQPSTLVAYEVLEPG---WLAVPKQYGLQNFSDVDDRQTQAETVVVPPS------LAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVHG--CGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIEL-SGPSRTPVRTLNIHKGGQLVANSAGMINLLQKPSAAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRLGTATFG--FIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHARNEL 1341 LRVP T +Q L++ Q LSALA PSTLVAY + E ++ +PK + L N + + + + V + LR HQ++AT+AV A R GGG +L L CG GKTVTAL +A L ++ LII +T VL +QW A I + P A VG I+QN F V+ THV+ASLKS+ATR+Y + G CGL +VDE H IA+ + RA+A+ G ++RLGLSATP+RADGLS +L+W IGP+ Y + R LR++ I L SGP V + K G+ VAN AGMINL+ + + A+ RQ + A WIRLC KGRK++VLSDRI LLK L + G +IG+A++ R+ A + VI AS+ A+EG D+PSLDT+ L+TPRSG VITQ VGR+ R GG+SPLV+D VD V LF GMF KRC+VY LG T+T+Y+ R L Sbjct: 10 LRVPLTPEIQQLIAELSIEQNQLSALADPSTLVAYTIEETAAGTFVNLPKMWALDNLDKLGVTKIIGKQLPVTMLEDKDVVSTIRQLRPHQIEATKAVTKAFNTRY-GGGALLVLSCGMGKTVTALHIAATLKLKCLIITHTDVLASQWAAAIMQYYPKARVGKIQQNTFDVEDKTHVIASLKSVATRQYDMAGAGCGLLVVDEVHRIASLQLHRAVANVGCKYRLGLSATPDRADGLSPFLKWGIGPVVYQLERDPTPDLRIFGIMLDSGPVYPKV----VRKNGKSVANIAGMINLMTEDTDRAKMRQQVAAAWIRLCAKKGRKIIVLSDRIDLLKGLEKLMKDHVDGTSLLIGSAKRAVRDVAHLSQVILASYGIASEGFDVPSLDTIILLTPRSGANVITQCVGRIQRPGGKSPLVIDIVDSVGLFKGMFAKRCKVYEHLGGTITKYNERREIL 462
BLAST of jgi.p|Trimin1|157670 vs. uniprot
Match: Q8QNK6_ESV1K (EsV-1-66 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNK6_ESV1K) HSP 1 Score: 215 bits (547), Expect = 5.850e-61 Identity = 156/409 (38.14%), Postives = 221/409 (54.03%), Query Frame = 1 Query: 142 VPKQYGLQNFSDVD-----DRQTQAETVVVPPSLAVE-SLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYP---VHGCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMIN-LLQKPSAAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRLGTAT---FGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLR--AGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYD 1323 VP+ YG+ NF + DRQ E++ P +A SLR QV+ E + AL G ++ L CG+GKT +L+V+ +T+I+V+T L QWK I + V A VG +++++ V G +HV+A ++S++ R YP + GL IVDEAHH+ A +SR + G + RLGLSATP R DG++ +L SIGP+ + R + L SGPS T + + + G+ N A MIN L A E R LV I +++ R V+VLSDR + LK + L GF++G + + EA +A VI A++A +EGLDIPSLDT L TPRS I Q GR+LR + P V+DFVDD +F G KR Y L A + +D Sbjct: 57 VPRMYGV-NFIQAENLPFEDRQNHGESL---PHIAFSGSLRERQVEPVEKTIRALETVHGG---VMSLYCGFGKTTCSLKVSCHFKKKTIILVHTTALLEQWKERIEQFVTNASVGVLQRDNIDVTGRSHVIALMQSVSRRNYPRELLDSFGLMIVDEAHHVCAAQLSRCVTKVGCKLRLGLSATPFRKDGMTQFLFDSIGPICARVDRGYEEVLVDVVYVTSGPSET----VCMKRKGKQSPNLAKMINNLCDVNDPAGESRTELVIETIVNALAEHRHVIVLSDRRNHLKVMGSMLAETAGVEVGFMVGGIKPADIEAVSARRVIMATYAYCSEGLDIPSLDTCVLATPRSD---IVQCCGRILRYHPSKQVPRVIDFVDDSVVFQGQARKRNMYYSKLRAFINYFD 451
BLAST of jgi.p|Trimin1|157670 vs. uniprot
Match: A0A0P0YML3_9PHYC (Putative VV A18 helicase n=1 Tax=Yellowstone lake phycodnavirus 1 TaxID=1586713 RepID=A0A0P0YML3_9PHYC) HSP 1 Score: 198 bits (503), Expect = 9.450e-55 Identity = 142/414 (34.30%), Postives = 214/414 (51.69%), Query Frame = 1 Query: 91 QPSTLVAYEVLEPGWLAVPKQYGLQNF----SDVDDRQTQAETVVVPPSLAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVHGC---GLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINLLQKPSAAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRLGTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLR-AGGR--SPLVLDFVDDVRLFGGMFGKRCRVYRTLG 1302 +P + Y G + VP+ +G + F +DV R + A+ +V +L E+ K EA + E GG +L LP G+GKT AL + +L VRT+I+V+ + L QW+ I E PGA +G I+Q+ + D V+A +++L +R P G IVDEAHHI A S+A+ +W LGL+ATPER DGL+ L W +GP + + R + RV I P L + G++ N AGM + + ++ R L+ I+ C+ R++LVLSDR + + + G G ++E E + VI A+F+ A EGLDIP LDT+ L TP S ITQ +GR++R G+ SPL+ D D + M+ KR ++Y++LG Sbjct: 37 RPPSFKVYRSETKGEIVVPRYFGSERFGPPTTDVRGRPSAADGLVFTGALRQET------KQPEAFAAGVKAFNECGGGVLSLPPGFGKTCMALAFSAQLKVRTIIVVHKEFLANQWRDRIKEFCPGATIGRIQQDIWDTD-KDFVIAMIQTLCSRELPSENFDQFGFVIVDEAHHIGAAAFSQAMFKFCPKWSLGLTATPERKDGLTRLLYWFMGPEFFRVNRENQKTTRVETIMYDDPVFKEGPPLT--RFGKI--NMAGMTTQITELNS----RNKLIIDIIKNCIGDKRRILVLSDRREHCEWIYSQFKNEIAGLYYGGLSEKELEETSKKIVIVATFSMAQEGLDIPVLDTVILTTPHSD---ITQAIGRIMRETKGKVNSPLIFDIADRWSVCFSMYRKRLKIYKSLG 432
BLAST of jgi.p|Trimin1|157670 vs. uniprot
Match: A0A6G6XPE5_9PHYC (Helicase ATP-binding domain-containing protein n=1 Tax=Dishui Lake phycodnavirus 4 TaxID=2704072 RepID=A0A6G6XPE5_9PHYC) HSP 1 Score: 197 bits (501), Expect = 1.650e-54 Identity = 143/402 (35.57%), Postives = 220/402 (54.73%), Query Frame = 1 Query: 136 LAVPKQYGLQNFSD-VDDRQTQAETVVVPPSLAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPV---HGCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPS-RTPVRTLNIHKGGQLVANSAGMINLLQKPSAAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRLGTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLR---AGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTR 1317 + +P+ +G++ F + +DR+ E + S+ + EA+ AL E G IL L CG+GKT+T+L +A RLG RT++IV+ + L QW+ I E PGA +G ++QN ++ V+A L+SLAT+ Y + G +VDEAHHI A + S++L + GLSATPER DGL+ L+W IGP+ +S R ++V+ I+ P+ R P L + G+L + MI+ L + SA R ++ I+ V +GRK+LVLSDR + R + G +G ++ + A++ VI A+++ A EGLDIP+LDT+ L TP+S I Q VGR+LR P + D +D+ + M+ KR +VYR G + R Sbjct: 48 ICIPRFFGIEKFGEPTEDRRPDPERL--SSSVRFTGRLRDETFQNEALDKAL----EVGHGILSLDCGFGKTITSLAIACRLGYRTMVIVHKEFLANQWEEKIKEFCPGATIGRVQQNKLEMN-CDFVIAMLQSLATKEYELTDFDSIGTVLVDEAHHICAKVFSQSLFKLCPKHIFGLSATPERKDGLTKVLKWFIGPIFFSAFRENQGQVQVFPIKFDSPTYRNPPPLL---RNGKL--SLVLMISELVEHSA----RNIMIMEIIQKIVKEGRKLLVLSDRRFHCEYFHSRFPMCS-GLYMGGMKQVDLSASSEKQVIFATYSQAHEGLDIPALDTIILATPKSD---IKQSVGRILRETPGKKNDPHIYDIIDEWSILQSMYYKRTKVYRECGFNIPR 429 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157670 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_256 ID=mRNA_256|Name=jgi.p|Trimin1|157670|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1350bp|location=Sequence derived from alignment at Contig_3:832008..833357+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGCTGACTTCGACTCTGCGGGTGCCGGACACGGCGGCGACGCGACAback to top protein sequence of jgi.p|Trimin1|157670 >Trimin1|157670|e_gw1.3.512.1 ID=Trimin1|157670|e_gw1.3.512.1|Name=jgi.p|Trimin1|157670|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=450bp MLLTSTLRVPDTAATRQALTVTQKALSALAQPSTLVAYEVLEPGWLAVPKback to top mRNA from alignment at Contig_3:832008..833357+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_256 ID=mRNA_256|Name=jgi.p|Trimin1|157670|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1350bp|location=Sequence derived from alignment at Contig_3:832008..833357+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:832008..833357+ >mRNA_256 ID=mRNA_256|Name=jgi.p|Trimin1|157670|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1350bp|location=Sequence derived from alignment at Contig_3:832008..833357+ (Tribonema minus UTEX_B_3156 )back to top |