mRNA_2537 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|158920
Unique NamemRNA_2537
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|158920 vs. uniprot
Match: A0A835YMC8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC8_9STRA)

HSP 1 Score: 457 bits (1175), Expect = 6.030e-163
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1
Query:    1 MDRPKEVVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRNELGQLLRVASYTVLDVSAEGAADQLRVIQTSGTNAGVDGITVYVHCGVDAGGMHFKLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADKRALFIHCPPHTSVGPEDQLCFIKDCLIVIADAL 651
            MDRPKEVVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRNELGQLLRVASYTVLDVSAEGAADQLRVIQTSGTNAGVDGITVYVHCGVDAGGMHFKLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADKRALFIHCPPHTSVGPEDQLCFIKDCLIVIADAL
Sbjct:    1 MDRPKEVVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRNELGQLLRVASYTVLDVSAEGAADQLRVIQTSGTNAGVDGITVYVHCGVDAGGMHFKLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADKRALFIHCPPHTSVGPEDQLCFIKDCLIVIADAL 217          
BLAST of jgi.p|Trimin1|158920 vs. uniprot
Match: A0A8B8KXE1_ABRPR (uncharacterized protein LOC113858613 n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8KXE1_ABRPR)

HSP 1 Score: 146 bits (369), Expect = 1.850e-40
Identity = 86/216 (39.81%), Postives = 123/216 (56.94%), Query Frame = 1
Query:   10 PKEVVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRNELGQLLRVASYTVLDVSAEGAADQL-RVIQT--SGTNAGVDGITVYVHCGVDAGGMHFKLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADKRALFIHCPPHTSVGPEDQLCFIKDCLIVIADA 648
            PK +  H+TGF KF GVP+NPT  ++ +L  Y+ ++    G  L   S  VLDV+ EGA  QL + +++  S T+   +    ++H GV++G + F +E  A NEATFR PDE G  P    I+ E+G +S T +T+LP   I ++L    +D  +  S D GRFVCNYVYY SL F     +K +LF+H P  + +  E Q+ F    L  IA A
Sbjct:    6 PKAITIHVTGFKKFQGVPENPTETIVNNLKSYVEKRGLPAGVTL--GSCIVLDVAGEGAIPQLYQTLESAFSNTDTVSNANVAWLHLGVNSGALRFAIERQAVNEATFRCPDELGWQPQQVPIVLEDGGISRTRKTSLPVGAILKSLKKGAYDMMI--SDDAGRFVCNYVYYHSLRFAEQKGNK-SLFVHFPLFSRIDEETQMRFTASLLEAIASA 216          
BLAST of jgi.p|Trimin1|158920 vs. uniprot
Match: D3B2C0_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B2C0_POLPP)

HSP 1 Score: 146 bits (368), Expect = 2.330e-40
Identity = 87/218 (39.91%), Postives = 127/218 (58.26%), Query Frame = 1
Query:    1 MDRPKEVVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRNELGQLL--RVASYTVLDVSAEGAADQLRVIQTSGTNAGVDGITVYV-HCGVDAGGMHFKLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADK-RALFIHCPPHTSVGPEDQLCFIKDCLIVIA 642
            M++  +V F LTGFGKFNGV DNPT  LMK++  Y++++R ++ +L+   + S  +++VSA  +    R + T  +        +Y+ H GV+A      LE C +N+A+FRVPDE G  PN   I   N    +   T+LP   + E L  +     V  STDPGRFVCNY+YY SL     ++DK ++LF+H PP T V  E+QL F+ D L +I+
Sbjct:    1 MEQSNKVKFILTGFGKFNGVSDNPTTHLMKNITEYVNKERQQVDRLIDFEILSNDIVEVSAVSSK---RTVDTIESLYSDHQHPIYIIHFGVNASAKCINLERCGWNDASFRVPDECGYCPNNEKIDLLNPECVNI-PTSLPIDHLIEKLCTS---HSVEPSTDPGRFVCNYIYYNSLMLSKKSSDKFKSLFVHVPPFTVVSMENQLKFVVDLLSLIS 211          
BLAST of jgi.p|Trimin1|158920 vs. uniprot
Match: A0A803L0L8_CHEQI (Uncharacterized protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803L0L8_CHEQI)

HSP 1 Score: 145 bits (366), Expect = 4.790e-40
Identity = 86/211 (40.76%), Postives = 119/211 (56.40%), Query Frame = 1
Query:   10 PKEVVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRNELGQLLRVASYTVLDVSAEGAADQLRVIQTSGTNAGVDGITVYVHCGVDAGGMHFKLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADKRALFIHCPPHTSVGPEDQLCFIKDCLIVIA 642
            PK + FH+TGF KF GV +NPT  ++ +L  Y+S  +N L   +++AS T+L+ + EGA   L  +   G +   +   V+VH GV++G   F LE  A+NEATFR PDE G  P    I+ E+G +S+T QT      I   L   G++  V  S D G FVCNYVYY SL F   A   ++LF+H P  + +  E Q+ FI   L  IA
Sbjct:    6 PKNITFHVTGFKKFQGVTENPTETIVSNLNEYVS--KNGLPTGVQLASCTILETAGEGARPALYELFEKGASNPDNESVVWVHLGVNSGAQKFALECQAFNEATFRCPDELGWQPQQVPIVPEDGEISNTRQTTCSADSILSFLKKKGFN--VMNSDDAGCFVCNYVYYHSLRFAE-ARGHKSLFVHVPLFSKIDKETQMRFITSLLGAIA 211          
BLAST of jgi.p|Trimin1|158920 vs. uniprot
Match: A0A0A0LVQ6_CUCSA (Uncharacterized protein n=8 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0LVQ6_CUCSA)

HSP 1 Score: 144 bits (363), Expect = 1.600e-39
Identity = 83/218 (38.07%), Postives = 126/218 (57.80%), Query Frame = 1
Query:   10 PKEVVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRNELGQLLRVASYTVLDVSAEGAADQL-RVIQTSGTNAGVDGIT----VYVHCGVDAGGMHFKLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADKRALFIHCPPHTSVGPEDQLCFIKDCLIVIADA 648
            P  V  H+TGF KF+GV DNPT  ++ +L  Y+  ++N L + L + S ++L+ + +GA D L + +Q++    G +       +++H GV++G   F +E  A+NEATFR PDE G  P    I+ E+G +S   +T+LP   I +TL+  G++  V  S D GRFVCNYVYY SL        K +LF+H P   ++  E Q+ FI   L V+A +
Sbjct:    6 PPSVTIHVTGFKKFHGVSDNPTETIVNNLKKYM--EKNGLPEGLTIGSCSILETAGQGALDLLHKTLQSAVEGKGSEPTNSRRIIWLHLGVNSGASRFAIERQAFNEATFRCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYE--VMTSDDAGRFVCNYVYYHSLRQAEENGIK-SLFVHVPLFLTIDEETQMQFIASLLEVLASS 218          
BLAST of jgi.p|Trimin1|158920 vs. uniprot
Match: A0A8B8QD38_9MYRT (uncharacterized protein LOC115751316 n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8QD38_9MYRT)

HSP 1 Score: 143 bits (361), Expect = 2.940e-39
Identity = 83/216 (38.43%), Postives = 122/216 (56.48%), Query Frame = 1
Query:   10 PKEVVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRNELGQLLRVASYTVLDVSAEGAADQLRVIQTSGTNAG---VDGITVYVHCGVDAGGMHFKLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADKRALFIHCPPHTSVGPEDQLCFIKDCLIVIADA 648
            PK +  +++GF KF GVP+NPT  ++ +L  ++ ++R   G  L   + TVL+ + +GA   L  +  SG ++     D   V++H GV++G + F +E+ + NEATFR PDE G  P    I+ E+G  S T QT+L T  I + L   G+D  V  S D GRFVCNYVYY SL        K +LF+H PP + +  E Q+ F+   L  IA +
Sbjct:    6 PKPITINVSGFKKFQGVPENPTETIVNNLTSFVEKKRLPPGVTL--GTCTVLETAGDGALPMLFEVMESGISSNGSTSDEQVVWLHLGVNSGALKFAIEQQSVNEATFRCPDELGWQPQQLPIVPEDGQTSRTRQTSLSTEAILKFLRKKGYD--VTLSKDAGRFVCNYVYYHSLRLAEQRGSK-SLFVHVPPFSRIDEETQMNFVASLLEAIASS 216          
BLAST of jgi.p|Trimin1|158920 vs. uniprot
Match: A0A804JIX6_MUSAM ((wild Malaysian banana) hypothetical protein n=2 Tax=Musa TaxID=4640 RepID=A0A804JIX6_MUSAM)

HSP 1 Score: 142 bits (358), Expect = 8.060e-39
Identity = 88/215 (40.93%), Postives = 121/215 (56.28%), Query Frame = 1
Query:    4 DRPKEVVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRNELGQLLRVASYTVLDVSAEGAADQL-RVIQTSGTNAGVD-GITVYVHCGVDAGGMHFKLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADKRALFIHCPPHTSVGPEDQLCFIKDCLIVIA 642
            +RP EV  H+TGFG+F GVP+NPT  ++  L  ++  Q   L Q LR+ S +VL+ + EGA   L RV++++      D G  ++VH GVD     F +E+ A NEATF  PDE G  P    I+A +G +S   QT LP   I + L+  G+    R S D G FVCNYVYY SL F        +LF+H PP  ++  E Q+ F+   L V+A
Sbjct:    4 ERPSEVAVHITGFGRFLGVPENPTEGIVAGLEHFM--QEKGLPQGLRLGSCSVLETAGEGALAPLYRVLESAVPQTSTDSGRVIWVHFGVDGSSSCFAVEKQAVNEATFPCPDELGWKPMRVPIIASDGGISQVRQTTLPVDDIVKALAKTGY--LARTSLDAGSFVCNYVYYHSLWFAEQHGFD-SLFVHVPPFETIHKEIQMKFVACLLDVLA 213          
BLAST of jgi.p|Trimin1|158920 vs. uniprot
Match: A0A059B1N4_EUCGR (Uncharacterized protein n=5 Tax=Myrtoideae TaxID=1699513 RepID=A0A059B1N4_EUCGR)

HSP 1 Score: 142 bits (357), Expect = 1.170e-38
Identity = 85/218 (38.99%), Postives = 121/218 (55.50%), Query Frame = 1
Query:   10 PKEVVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRNELGQLLRVASYTVLDVSAEGAADQLRVIQTSGTNAGVDGIT-----VYVHCGVDAGGMHFKLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADKRALFIHCPPHTSVGPEDQLCFIKDCLIVIADA 648
            PK V  ++TGF KF GVP+NPT  ++ +L  ++ ++    G  +   + TVL+ + +GA   L  +  SG ++  DG T     V++H GV++G   F +E  A NEATFR PDE G  P    I+ E+G +S T QT+  T  I E L   G+D  V  S + GRFVCNYVYY SL         R+LF+H PP + +  E Q+ F+   L  IA +
Sbjct:    6 PKPVTINVTGFKKFQGVPENPTETIVNNLKSFVEKKGLPPG--VTFGTCTVLEAAGDGALPMLFKVMESGISS--DGSTCDAQVVWLHLGVNSGAHKFAIERQAVNEATFRCPDELGWRPQQLPIVPEDGKISRTRQTSFSTKAILEFLKKKGYD--VTLSNNAGRFVCNYVYYHSLRLAEQRGS-RSLFVHVPPFSRIDEETQMNFVASLLEAIASS 216          
BLAST of jgi.p|Trimin1|158920 vs. uniprot
Match: X6PF70_RETFI (Pyroglutamyl-peptidase I n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6PF70_RETFI)

HSP 1 Score: 141 bits (356), Expect = 4.050e-38
Identity = 84/227 (37.00%), Postives = 120/227 (52.86%), Query Frame = 1
Query:   19 VVFHLTGFGKFNGVPDNPTWRLMKSLP--VYLSQQRNELGQLLRVASYTVLDVSAEGAADQLRVIQTSGT--------NAGVDG-----ITVYVHCGVDAGGMHF-KLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADKRALFIHCPPHTSVGPEDQLCFIKDCLIVIADAL 651
            ++F++TGFGKF GV DNPT  LM +LP  + +  ++    + + + SY+VL VS E +  +L  I+T           N   D      I VY+H GV  G  H+ K+E   YN A FR+PDE G  P    I++ NG   H     LP   + + +S  G+   V  S DPGR+VCN++YY SL  C    ++ ALF+H PP   +  E Q  F +D ++ I D L
Sbjct:   20 IIFNVTGFGKFGGVEDNPTSHLMTNLPKIIEVDVKKETFPKNVTMESYSVLHVSGENSLKKLVDIRTKSAETIKSNTKNEKEDKQEKEIIKVYLHFGV--GNRHYIKIEGIGYNCANFRIPDELGWEPKDQPIVSSNGDTKHENHCRLPVDILTKRMSQKGYK--VESSVDPGRYVCNWIYYNSLELCKNNNNEYALFVHVPPFEDINEETQTKFARDLILEIYDIL 242          
BLAST of jgi.p|Trimin1|158920 vs. uniprot
Match: I1N1I2_SOYBN (Uncharacterized protein n=5 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1N1I2_SOYBN)

HSP 1 Score: 140 bits (352), Expect = 6.590e-38
Identity = 84/216 (38.89%), Postives = 121/216 (56.02%), Query Frame = 1
Query:   10 PKEVVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRNELGQLLRVASYTVLDVSAEGAADQLRVIQTSG---TNAGVDGITVYVHCGVDAGGMHFKLEECAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAAGWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADKRALFIHCPPHTSVGPEDQLCFIKDCLIVIADA 648
            P+ +  H+TGF KF GVP+NPT  ++ +L  Y+  +R  L   + + S TVLDV+ +GA  QL     S    T++  +   V++H GV++G + F +E  A NEATFR PDE G  P    I+ E+G +S T +T++    I ++L    +D  V  S + GRFVCNYVYY SL F     +K +LF+H P    +  E Q+ F    L  IA A
Sbjct:    6 PRAITIHVTGFKKFQGVPENPTEAIVNNLKEYV--ERRGLPAGVTLGSCTVLDVAGDGALPQLYQTMESAISKTDSVSNANVVWLHLGVNSGAVRFAIEHQAANEATFRCPDELGWQPQQLPIVLEDGGISQTRKTSMHVDAILKSLKKGAYD--VMISGNAGRFVCNYVYYHSLRFAEQKGNK-SLFVHVPLFARIDQETQMRFTASLLDAIASA 216          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158920 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YMC8_9STRA6.030e-163100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A8B8KXE1_ABRPR1.850e-4039.81uncharacterized protein LOC113858613 n=1 Tax=Abrus... [more]
D3B2C0_POLPP2.330e-4039.91Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
A0A803L0L8_CHEQI4.790e-4040.76Uncharacterized protein n=2 Tax=Chenopodium quinoa... [more]
A0A0A0LVQ6_CUCSA1.600e-3938.07Uncharacterized protein n=8 Tax=Cucurbitaceae TaxI... [more]
A0A8B8QD38_9MYRT2.940e-3938.43uncharacterized protein LOC115751316 n=1 Tax=Rhoda... [more]
A0A804JIX6_MUSAM8.060e-3940.93(wild Malaysian banana) hypothetical protein n=2 T... [more]
A0A059B1N4_EUCGR1.170e-3838.99Uncharacterized protein n=5 Tax=Myrtoideae TaxID=1... [more]
X6PF70_RETFI4.050e-3837.00Pyroglutamyl-peptidase I n=1 Tax=Reticulomyxa filo... [more]
I1N1I2_SOYBN6.590e-3838.89Uncharacterized protein n=5 Tax=Glycine subgen. So... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_7contigContig_7:609282..609932 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|158920|e_gw1.7.121.1
BRITEko00000,ko01000,ko01002
KEGG koko:K01304
EC3.4.19.3
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
DescriptionPyroglutamyl peptidase
COG categoryO
Max annot lvl35493|Streptophyta
EggNOG OGsCOG2039@1|root,KOG4755@2759|Eukaryota,37T94@33090|Viridiplantae,3GAYT@35493|Streptophyta,4JKMN@91835|fabids
Evalue2.14e-41
Seed ortholog102107.XP_008221840.1
Hectar predicted targeting categoryother localisation
TranscriptId159242
TrackFilteredModels1
ProteinId158920
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158920gene_2537Tribonema minus UTEX_B_3156 geneContig_7 609282..609932 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2537_1exon_2537_1Tribonema minus UTEX_B_3156 exonContig_7 609282..609932 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2537CDS_2537Tribonema minus UTEX_B_3156 CDSContig_7 609282..609932 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158920Trimin1|158920|e_gw1.7.121.1Tribonema minus UTEX_B_3156 polypeptideContig_7 609282..609932 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2537 ID=mRNA_2537|Name=jgi.p|Trimin1|158920|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=651bp|location=Sequence derived from alignment at Contig_7:609282..609932- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACAGACCGAAGGAGGTTGTGTTCCATCTGACGGGCTTTGGCAAGTT
CAATGGAGTGCCAGACAACCCCACCTGGCGCCTCATGAAGTCCCTGCCCG
TTTACCTCAGCCAGCAGAGGAACGAGCTGGGCCAGCTGCTGAGGGTAGCG
TCGTACACAGTGCTGGATGTGTCGGCGGAAGGAGCAGCGGACCAGCTTAG
AGTGATCCAGACCAGCGGCACCAACGCAGGCGTCGACGGCATCACAGTCT
ACGTCCACTGCGGCGTCGATGCAGGCGGCATGCACTTTAAGCTGGAGGAG
TGTGCCTACAACGAAGCCACCTTCCGGGTGCCCGACGAGAGGGGCGCGAC
GCCCAACGGAGCCCTCATCATGGCAGAAAATGGCACGCTGTCCCACACCT
ACCAGACCAACCTCCCGACGGCCTGGATCCACGAGACGCTCAGCGCGGCG
GGCTGGGACAGGCACGTGCGCCGGAGCACGGACCCCGGCCGCTTCGTCTG
CAACTACGTCTACTACAAGTCCCTGGCCTTCTGCAGCGGCGCTGCAGACA
AGCGCGCGCTCTTCATCCACTGCCCGCCCCACACGTCCGTCGGCCCCGAG
GACCAGCTCTGCTTCATCAAGGACTGCCTCATCGTCATCGCGGATGCCCT
C
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protein sequence of jgi.p|Trimin1|158920

>Trimin1|158920|e_gw1.7.121.1 ID=Trimin1|158920|e_gw1.7.121.1|Name=jgi.p|Trimin1|158920|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=217bp
MDRPKEVVFHLTGFGKFNGVPDNPTWRLMKSLPVYLSQQRNELGQLLRVA
SYTVLDVSAEGAADQLRVIQTSGTNAGVDGITVYVHCGVDAGGMHFKLEE
CAYNEATFRVPDERGATPNGALIMAENGTLSHTYQTNLPTAWIHETLSAA
GWDRHVRRSTDPGRFVCNYVYYKSLAFCSGAADKRALFIHCPPHTSVGPE
DQLCFIKDCLIVIADAL
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mRNA from alignment at Contig_7:609282..609932-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2537 ID=mRNA_2537|Name=jgi.p|Trimin1|158920|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=651bp|location=Sequence derived from alignment at Contig_7:609282..609932- (Tribonema minus UTEX_B_3156 )
ATGGACAGACCGAAGGAGGTTGTGTTCCATCTGACGGGCTTTGGCAAGTT CAATGGAGTGCCAGACAACCCCACCTGGCGCCTCATGAAGTCCCTGCCCG TTTACCTCAGCCAGCAGAGGAACGAGCTGGGCCAGCTGCTGAGGGTAGCG TCGTACACAGTGCTGGATGTGTCGGCGGAAGGAGCAGCGGACCAGCTTAG AGTGATCCAGACCAGCGGCACCAACGCAGGCGTCGACGGCATCACAGTCT ACGTCCACTGCGGCGTCGATGCAGGCGGCATGCACTTTAAGCTGGAGGAG TGTGCCTACAACGAAGCCACCTTCCGGGTGCCCGACGAGAGGGGCGCGAC GCCCAACGGAGCCCTCATCATGGCAGAAAATGGCACGCTGTCCCACACCT ACCAGACCAACCTCCCGACGGCCTGGATCCACGAGACGCTCAGCGCGGCG GGCTGGGACAGGCACGTGCGCCGGAGCACGGACCCCGGCCGCTTCGTCTG CAACTACGTCTACTACAAGTCCCTGGCCTTCTGCAGCGGCGCTGCAGACA AGCGCGCGCTCTTCATCCACTGCCCGCCCCACACGTCCGTCGGCCCCGAG GACCAGCTCTGCTTCATCAAGGACTGCCTCATCGTCATCGCGGATGCCCT C
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Coding sequence (CDS) from alignment at Contig_7:609282..609932-

>mRNA_2537 ID=mRNA_2537|Name=jgi.p|Trimin1|158920|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=651bp|location=Sequence derived from alignment at Contig_7:609282..609932- (Tribonema minus UTEX_B_3156 )
ATGGACAGACCGAAGGAGGTTGTGTTCCATCTGACGGGCTTTGGCAAGTT
CAATGGAGTGCCAGACAACCCCACCTGGCGCCTCATGAAGTCCCTGCCCG
TTTACCTCAGCCAGCAGAGGAACGAGCTGGGCCAGCTGCTGAGGGTAGCG
TCGTACACAGTGCTGGATGTGTCGGCGGAAGGAGCAGCGGACCAGCTTAG
AGTGATCCAGACCAGCGGCACCAACGCAGGCGTCGACGGCATCACAGTCT
ACGTCCACTGCGGCGTCGATGCAGGCGGCATGCACTTTAAGCTGGAGGAG
TGTGCCTACAACGAAGCCACCTTCCGGGTGCCCGACGAGAGGGGCGCGAC
GCCCAACGGAGCCCTCATCATGGCAGAAAATGGCACGCTGTCCCACACCT
ACCAGACCAACCTCCCGACGGCCTGGATCCACGAGACGCTCAGCGCGGCG
GGCTGGGACAGGCACGTGCGCCGGAGCACGGACCCCGGCCGCTTCGTCTG
CAACTACGTCTACTACAAGTCCCTGGCCTTCTGCAGCGGCGCTGCAGACA
AGCGCGCGCTCTTCATCCACTGCCCGCCCCACACGTCCGTCGGCCCCGAG
GACCAGCTCTGCTTCATCAAGGACTGCCTCATCGTCATCGCGGATGCCCT
C
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