mRNA_2486 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|85478
Unique Name	mRNA_2486
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|85478 vs. uniprot
Match: A0A835YVH3_9STRA (Trigger_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH3_9STRA)

HSP 1 Score: 357 bits (916), Expect = 9.420e-122
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1

Query:  130 MAGTMTQLALLVVALLAPSSLAFVPSALSIGSGSSRHAVRMTAAVAGEPLAHAMDGVKATRLEAVDEAAGIYQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNAELTQQVEDLVAAFKPGKTLSINAKVNAKDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAEAAEDFYSWQTVRRR 828
            MAGTMTQLALLVVALLAPSSLAFVPSALSIGSGSSRHAVRMTAAVAGEPLAHAMDGVKATRLEAVDEAAGIYQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNAELTQQVEDLVAAFKPGKTLSINAKVNAKDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAEAAEDFYSWQTVRRR
Sbjct:    1 MAGTMTQLALLVVALLAPSSLAFVPSALSIGSGSSRHAVRMTAAVAGEPLAHAMDGVKATRLEAVDEAAGIYQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNAELTQQVEDLVAAFKPGKTLSINAKVNAKDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAEAAEDFYSWQTVRRR 233

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BLAST of jgi.p|Trimin1|85478 vs. uniprot
Match: D7FPQ2_ECTSI (Trigger_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ2_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 4.630e-25
Identity = 63/177 (35.59%), Postives = 101/177 (57.06%), Query Frame = 1

Query:  151 LALLVVALLAPSSLAFVPSALSIGSGSSRHAVRMTAA------VAGEPLAHAMDGVKATRLEAVDEAAGIYQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNAELTQQVEDLVAAFKPGKTLSINAKVNAK 663
            LA ++ AL    + AFV      G+G + H+ R  +       +  E L      +K  +LE VDEA G+++YEF+IE  G  TQ++++ I +E++ K+ FPG+RKG+IPP    +   + +EE +NE L +ALA + L   +G    A++   +ED++  FKPGK LS +   +AK
Sbjct:   10 LASVLTALCCSQAFAFV------GTGINLHSTRWNSCGTRGMRMEVEELEQLNPAIKGKKLEIVDEAEGVWKYEFDIEAPGPRTQSLHHRILREIKNKSDFPGYRKGEIPPRLMPEATKYVIEEVMNEGLQTALATYNLVGAKGDGSEADIKNDIEDMLKVFKPGKPLSFSCTFDAK 180

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BLAST of jgi.p|Trimin1|85478 vs. uniprot
Match: A0A1Z5JG88_FISSO (Trigger_N domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JG88_FISSO)

HSP 1 Score: 90.1 bits (222), Expect = 6.230e-18
Identity = 40/105 (38.10%), Postives = 68/105 (64.76%), Query Frame = 1

Query:  343 YQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNAELTQQVEDLVAAFKPGKTLSINAKVN 657
            YQ+     + G++ ++ +  + K  +KKA FPGFRKGQ+PP+A  Q+  FS++EA+ +++ +A+ AHGL+ L G +G  E+ + VED+V  +K G  +   A +N
Sbjct:   74 YQFWMTATVDGNMIKDNHTELLKNAKKKANFPGFRKGQVPPYAMPQITQFSIQEAIIKTVEAAVDAHGLKALSGSDGQVEVKENVEDMVKGYKLGDPIQFTAVLN 178

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BLAST of jgi.p|Trimin1|85478 vs. uniprot
Match: K0R1B8_THAOC (Trigger_N domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R1B8_THAOC)

HSP 1 Score: 89.7 bits (221), Expect = 9.040e-18
Identity = 45/133 (33.83%), Postives = 77/133 (57.89%), Query Frame = 1

Query:  268 GEPLAHAMDGVKATRLEAVDEAA-GIYQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNAELTQQVEDLVAAFKPGKTLSINAKVNAK 663
            G+ L      ++ +R++ + E   G+Y +    +  G   +++    EKE  +KA FPGFRKGQIPP+A  Q+ TF+++EA+ ++   +L A+GLE L G +G+  + ++VED+V  +K G  +   A    K
Sbjct:   48 GDELIRVSSSMEGSRMKNMGEVGDGVYNFWLTGKADGGKIKSLIQQTEKEASRKANFPGFRKGQIPPYAMPQIRTFAIQEALIKTCEESLEAYGLESLPGSDGSVTINEKVEDIVKGYKVGSDVEFTATYKGK 180

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BLAST of jgi.p|Trimin1|85478 vs. uniprot
Match: A0A7S2CNK0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CNK0_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 9.120e-18
Identity = 43/108 (39.81%), Postives = 71/108 (65.74%), Query Frame = 1

Query:  343 YQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNAELTQQVEDLVAAFKPGKTLSINAKVNAKD 666
            ++Y  ++ I G+ T+     IEK+ +K A FPGFRKGQIPP+A+ ++ TF VE A+N+ ++ A+ +  L  L+G++ NAE+ + V +L+  +K G  LS  A  +AK+
Sbjct:   86 HKYFLKMTIPGETTKEYMKEIEKDSKKNADFPGFRKGQIPPWAKPKLKTFCVETALNDGIMDAMESAKLTALDGEDKNAEVLEDVAELIRGYKIGTPLSFTASFSAKE 193

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BLAST of jgi.p|Trimin1|85478 vs. uniprot
Match: A0A448ZF46_9STRA (Trigger_N domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZF46_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.790e-17
Identity = 45/113 (39.82%), Postives = 70/113 (61.95%), Query Frame = 1

Query:  325 DEAAG-IYQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNAELTQQVEDLVAAFKPGKTLSINAKVNA 660
            DE  G I +Y    +++G + + I+  + KE  KKA FPGFRKGQ+PPFA  Q+  F+V+EA+ ++  SA+ A+GL+ + G +G  E+ + V ++  A+K G  L   A  NA
Sbjct:   81 DEDQGPINKYWLTAKVEGPLIKEIHQTVLKESAKKANFPGFRKGQVPPFAMPQIRGFAVQEAIVQTCQSAVDAYGLKSVSGSDGEVEVLEDVPEMAKAYKLGDDLEFTATFNA 193

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BLAST of jgi.p|Trimin1|85478 vs. uniprot
Match: A0A7S4ER47_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ER47_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 9.320e-17
Identity = 45/124 (36.29%), Postives = 73/124 (58.87%), Query Frame = 1

Query:  292 DGVKATRLEAVDEAAG-IYQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNAELTQQVEDLVAAFKPGKTLSINAKVNA 660
            +G+   R E   E  G I +Y    +++G + + I+  + KE  KKA FPGFRKGQ+PPFA  Q+  F+V+E++  +  SA+ A+GL+ + G +G  E+ + + ++  A+K G  L   A  NA
Sbjct:   69 EGLSGVRSEEDAETQGTINKYWLTAKVEGSLVREIHQTVLKESAKKANFPGFRKGQVPPFAMPQIRGFAVQESIVRTCQSAVDAYGLKSVSGSDGEVEVLEDIPEVAKAYKLGDDLEFTATFNA 192

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BLAST of jgi.p|Trimin1|85478 vs. uniprot
Match: A0A7S2VBM0_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VBM0_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.240e-16
Identity = 41/125 (32.80%), Postives = 76/125 (60.80%), Query Frame = 1

Query:  307 TRLEAVDEAAGI-------YQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNAELTQQVEDLVAAFKPGKTLSINAKVNA 660
            +R++ ++E  G+       Y++    E+ G + + +   I K+  KKA FPGFRKGQ+PP+A  ++ TF+V+EA+ +++ + +  +GL++LEG +G  E+ + +ED+   +  G    I A +NA
Sbjct:   62 SRVKQMEELKGVKSDLGTPYEFWLTAEVDGTLVKEVRTTILKDASKKANFPGFRKGQVPPYALPKMTTFAVQEAIIKTVQAVVDCYGLKELEGDDGKVEVKEDLEDICKGYNVGDPFQITATINA 186

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BLAST of jgi.p|Trimin1|85478 vs. uniprot
Match: A0A7S1E1Y9_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E1Y9_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.400e-16
Identity = 42/124 (33.87%), Postives = 76/124 (61.29%), Query Frame = 1

Query:  307 TRLEAVDEAAG-------IYQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNAELTQQVEDLVAAFKPGKTLSINAKVN 657
            TR++ ++EA G       +Y++  +    GD+ +     + K+ +KKA FPGFRKGQ+PP+A  Q+  F+++E++ +++  A+AA+ L+ L G +G  E+ + VE+L   +K G +L   A +N
Sbjct:    3 TRVKKLEEADGLKSNDGPVYKFWLKSLASGDLIKEYKITLLKDAKKKANFPGFRKGQVPPYAMPQITGFAIQESLIKTVEQAVAAYALKSLPGSDGQVEILEDVEELCKGYKDGTSLEFTATLN 126

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BLAST of jgi.p|Trimin1|85478 vs. uniprot
Match: B5Y4V7_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y4V7_PHATC)

HSP 1 Score: 84.3 bits (207), Expect = 9.920e-16
Identity = 39/107 (36.45%), Postives = 67/107 (62.62%), Query Frame = 1

Query:  340 IYQYEFEIEIQGDVTQNIYNGIEKELRKKAAFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNAELTQQVEDLVAAFKPGKTLSINAKVNA 660
            +Y +    E++G + + I + I K+  KKA FPGFRKGQ+PP+A+ Q+  FSV+EA+ +++ +A+ + GL+ + G  G   + + VE +   +K G  ++  AK NA
Sbjct:   80 VYSFWMTAEVEGALIKEIRSQILKDAAKKANFPGFRKGQVPPYAQPQITGFSVQEAIIKTVEAAVNSFGLKSIPGSAGEINVNEDVEAISKGYKVGDNINFTAKFNA 186

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|85478 vs. uniprot

BLAST of jgi.p|Trimin1|85478 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24


Match Name	E-value	Identity	Description
A0A835YVH3_9STRA	9.420e-122	100.00	Trigger_N domain-containing protein n=1 Tax=Tribon...	[more]
D7FPQ2_ECTSI	4.630e-25	35.59	Trigger_N domain-containing protein n=2 Tax=Ectoca...	[more]
A0A1Z5JG88_FISSO	6.230e-18	38.10	Trigger_N domain-containing protein n=2 Tax=Fistul...	[more]
K0R1B8_THAOC	9.040e-18	33.83	Trigger_N domain-containing protein n=1 Tax=Thalas...	[more]
A0A7S2CNK0_9STRA	9.120e-18	39.81	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A448ZF46_9STRA	8.790e-17	39.82	Trigger_N domain-containing protein n=1 Tax=Pseudo...	[more]
A0A7S4ER47_9STRA	9.320e-17	36.29	Hypothetical protein n=1 Tax=Pseudo-nitzschia aust...	[more]
A0A7S2VBM0_9STRA	1.240e-16	32.80	Hypothetical protein n=2 Tax=Amphiprora paludosa T...	[more]
A0A7S1E1Y9_9STRA	1.400e-16	33.87	Hypothetical protein n=2 Tax=Thalassionema nitzsch...	[more]
B5Y4V7_PHATC	9.920e-16	36.45	Predicted protein n=3 Tax=Phaeodactylum tricornutu...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_7	contig	Contig_7:57742..63762 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|85478\|CE85477_542
Description	Bacterial trigger factor protein (TF)
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2E9TB@1\|root,2SG42@2759\|Eukaryota
Evalue	3.83e-26
Seed ortholog	2880.D7FPQ2
Hectar predicted targeting category	chloroplast
Ec32 ortholog description	Trigger factor, ribosome-binding, bacterial
Ec32 ortholog	Ec-20_000920.1
TranscriptId	85800
Track	FilteredModels1
ProteinId	85478

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|85478	gene_2486	Tribonema minus UTEX_B_3156	gene	Contig_7 57742..63762 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|85478	Trimin1\|85478\|CE85477_542	Tribonema minus UTEX_B_3156	polypeptide	Contig_7 57823..63633 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_2486_5	exon_2486_5	Tribonema minus UTEX_B_3156	exon	Contig_7 57742..57861 -
exon_2486_4	exon_2486_4	Tribonema minus UTEX_B_3156	exon	Contig_7 58830..59027 -
exon_2486_3	exon_2486_3	Tribonema minus UTEX_B_3156	exon	Contig_7 60871..60984 -
exon_2486_2	exon_2486_2	Tribonema minus UTEX_B_3156	exon	Contig_7 62222..62371 -
exon_2486_1	exon_2486_1	Tribonema minus UTEX_B_3156	exon	Contig_7 63433..63762 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_2486	UTR3_2486	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_7 57742..57822 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_2486	CDS_2486	Tribonema minus UTEX_B_3156	CDS	Contig_7 63433..63633 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_2486	UTR5_2486	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_7 63634..63762 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_7:57742..63762-
coding sequence from alignment at Contig_7:57742..63762-

spliced messenger RNA

>mRNA_2486 ID=mRNA_2486|Name=jgi.p|Trimin1|85478|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=912bp|location=Sequence derived from alignment at Contig_7:57742..63762- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TGCGCGCTCAAATTTTCATTTACTAAAGTTTGTCTTTAAATTTGGATGAG
GTTGATCACCTATTATGTAGGTTTAATCTAGGGTTGCCACGTACGCGATC
ATCGCACCAGGAGCAGGGGCTGTAGCGGCATGGCGGGCACGATGACGCAG
CTGGCGCTGCTGGTGGTGGCCCTGCTGGCGCCCAGCTCGCTGGCCTTCGT
GCCATCTGCGCTGAGCATTGGCAGCGGCAGCAGCAGACATGCCGTCAGGA
TGACTGCTGCTGTGGCAGGAGAGCCGCTGGCGCACGCCATGGACGGAGTC
AAAGCCACTAGATTGGAGGCCGTGGATGAGGCTGCGGGAATATACCAATA
CGAGTTTGAGATTGAGATTCAGGGCGACGTTACGCAGAACATTTACAACG
GCATTGAGAAGGAGCTGCGTAAGAAGGCGGCGTTTCCGGGGTTCCGCAAG
GGGCAGATCCCCCCCTTTGCGCGAAAACAGGTGATCACCTTCAGCGTGGA
GGAGGCTGTGAATGAGAGCCTCATCAGCGCGCTCGCGGCGCACGGCCTGG
AGAAGCTGGAGGGGAAGGAGGGCAATGCGGAGCTGACGCAGCAGGTGGAG
GACCTCGTTGCCGCGTTTAAGCCGGGGAAGACGCTCAGCATCAACGCCAA
GGTCAACGCCAAGGACACCGCTGGCGCGGCCGCAACCGCCGCAAGTGAAG
TTGAAGCTGAAGCAGAAGTTGAAGAAGCGGGCGAGGACGCTGCTAGCAGC
GATGCCGACGCTGGCGCCGCCGCGGCGCCCGCAGAGGCAGCGGAGGACTT
TTACAGCTGGCAGACAGTTCGGCGAAGGTGACGTGCCGCCCCGTTGGCGC
CCCACGGCAGCGGAAGAGCTCCCGATCGCCACCATCACAAATAGAAACTG
CCAATTTCCTTA

protein sequence of jgi.p|Trimin1|85478

>Trimin1|85478|CE85477_542 ID=Trimin1|85478|CE85477_542|Name=jgi.p|Trimin1|85478|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=234bp
MAGTMTQLALLVVALLAPSSLAFVPSALSIGSGSSRHAVRMTAAVAGEPL
AHAMDGVKATRLEAVDEAAGIYQYEFEIEIQGDVTQNIYNGIEKELRKKA
AFPGFRKGQIPPFARKQVITFSVEEAVNESLISALAAHGLEKLEGKEGNA
ELTQQVEDLVAAFKPGKTLSINAKVNAKDTAGAAATAASEVEAEAEVEEA
GEDAASSDADAGAAAAPAEAAEDFYSWQTVRRR*

mRNA from alignment at Contig_7:57742..63762-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_2486 ID=mRNA_2486|Name=jgi.p|Trimin1|85478|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6021bp|location=Sequence derived from alignment at Contig_7:57742..63762- (Tribonema minus UTEX_B_3156 )
TGCGCGCTCAAATTTTCATTTACTAAAGTTTGTCTTTAAATTTGGATGAG
GTTGATCACCTATTATGTAGGTTTAATCTAGGGTTGCCACGTACGCGATC
ATCGCACCAGGAGCAGGGGCTGTAGCGGCATGGCGGGCACGATGACGCAG
CTGGCGCTGCTGGTGGTGGCCCTGCTGGCGCCCAGCTCGCTGGCCTTCGT
GCCATCTGCGCTGAGCATTGGCAGCGGCAGCAGCAGACATGCCGTCAGGA
TGACTGCTGCTGTGGCAGGAGAGCCGCTGGCGCACGCCATGGACGGAGTC
AAAGCCACTAGATTGGAGGCCGTGGATGAGGTGGGTATATGTGCGAAGCA
GTTTGCTGCCAGCGTGCCGTGCATCGTGGGTCTGATGCATATCTATGAAC
AAACACCAGCGCAGCAGCCAAACCAAAAAGAGCGATTGGATGCCGTCATA
TCGCGAGCTTTGCACCGTACCTGGTGATTATGTTAAACTGCAACGCAGAT
AGAGGCAGTGAGGCACTAGTCAGTTGCACGCAACGTGTGTGAGGCAGATT
TGACGGTGGGGCATTGGTCAACTTCAACTTGCTAATGTCAGAGATCGAAA
AAGTCCGAATTTAGTACTGACCTAGACCTGTCGTATGGTGTGGGTTTCAA
ACGGATACAAATGTGGCAAGCGCTGCTGCGAGCTGATGTGCTGGGATACA
TCACTCAGGTTTGATAAATATCGTTGTCTTGCGTCCCGTAGCAGCACCAT
TGCAGGATCTTGATCATTGACTGCTGAGTCAACCTCTCAGTTTTCGGTTT
GCATGGCCATCAAACAGCCCCTCAGTGCAGCTGCAGCTTCATGAGGACAC
CCGCAGCTGCATTCAACTGCTGCCGGGCATTCCCCACTGTGTTGTGCAGC
AACAATTCGGATGTCTGGCAGTACGCCGATTCGGCTCAGCCGTGCTAACG
CCAGTGCTAGCTGGTATGGAGATGTAAGCGTAAGTTAGGCAGGTGTGTGC
GTCAGCAGCTCAGCAGACTGCCATCGGCTTCAGCAAGGGACAGTCTCGGG
CTGGCTCCAGATAGTCTGTCAGAGACCTAGACTCTGTTCCATTTTGTCAT
CTGATCATCACCACTTTGCGTCGCGACCATCAGGCGCAACTCCTCCGTGG
CTGACCTCATGACACGTAAAACACTAGTAGGCTTCCCTGAAGTAATGGAA
GACCTCACAACACGTCACGCTAGTAGGCTTCCCGGCAGTTATTGAAGTTG
GTCAACGGTAAGTGCGCCCCGTCTGACTGCGTTGAACAACCATTCCGCTC
TCGGCTTTGATGTTGCTAACTTCAAGCATCGGACACCACGCATATCTGGT
CTCAAACTACCCTCACCCTGCCTAACGCCAACCCCCCACAGGCTGCGGGA
ATATACCAATACGAGTTTGAGATTGAGATTCAGGGCGACGTTACGCAGAA
CATTTACAACGGCATTGAGAAGGAGCTGCGTAAGAAGGCGGCGTTTCCGG
GGTTCCGCAAGGGGCAGATCCCCCCCTTTGCGCGAAAACAGGTACGCATA
CGCGCGAACTACATGTGATTGAGTATACTTCTAAGTGCACGTAACGTAAT
ATGCTTAGATTAATCTTATAAGAGGAGGCGCGCATCATGCAACGTGGGCC
AGCATTTGAAGTTGAAGTTTGGCGTGCTGAACGTGCGGCCCGCATTTCCG
GGGTTTTGCAAGAGCGACAGCAGCGTGCGCTGCCTGTCGTACATACATGG
CCTGTATTGATGGAAACGCATGCGCTAGTGCGAGCGTTGCAACCACACCT
TAGCAATGCCTAGCTACTGCATGTGCAAGTCGCCGTTAGGAGTAATGTTC
TGACGGGGGGGGAGGGCAGTGAAGTTGAAGTTGGCATGCCAACTTCAGCT
TCAAATCATTCAATCATGTGTGATGACGATTACATCTGCAGGGTCATTAC
CTTCAGCGTGAGGCGGAAGCTGTCGACGTGCCCACTTGAGCTTGAAAAAA
ACAAGACGTGGCCTACTTGAACTTGAAGTATTTTGCATCACGAGCGTCCG
CCGTGCCGCGATGCGTGCAAGTCAACGCCTTCAGCGTGGAGGAGGCTGTG
AACGAGAGCCTCATCGGCGCGCGCGCGTCCGCTTCAACTTGAAAAGAGTT
TTAACACTTCGAAGTGACCTACTCCAACTTGAAGTAGCTTTGCGCACCGC
TCCACGTTCTGCGCAGGTGATCACCTTTGGCGTGGAGGAGGCTGTGAACG
AGAGTCGCATCGTGAACTTGATCTTGAAGTAGGTTTATAGATCAGTGACC
TACTTCAATTTTCAGATGTTAATCGGCACCTCTGTTCACAGAATATTCGT
CATCACAATGGTGCCGCCGTGTGAGAGTTTTTCAGGTCATCGCGCTCGGC
AGCATTTCCTTCCTCACATCGACGGCAATGTAGTATTATGTGAACGCCAA
GTTCAACCTCTCACATTGCTGCTCCAGGTCTTCATTTCAGCGTAAAGGAG
GCTGTGAATGACCTCATCAGCGCGTGTGCTCACTTGAACTCGCAGAAGTT
TATTGATCAGAAGTGACTACTTCAACTTGAAGTATTACCCATGTGACAGC
GTCTGTTACGCCATATGCGTGCAGGTAATCACCTTACATGTGGGAGAGGC
ACTGAACAGGAGCCTCATCAGCACGCGCGTCACCTGAACCCAAAGACTTC
GTATTGTTCAAAAGTGCCCTACTTCAAGTTGAAGTATAACTCATCATGAT
AGTGTCTCCTGCGCTATGATGTGTGCAGGTGATCACCTTCAGCGTGGAGG
AGGCTGTGAATGAGAGCCTCATCAGCGCGCTCGCGGCGCACGGCCTGGAG
AAGCTGGAGGGGAAGGAGGGCAATGCGGAGCTGACGCAGCAGGTGCGGTG
TTGACGATGTTGTAGATTGAAGTGTCACTGCCTTCAAGTGTGGGCCATTG
ATTTGGCAAAGAAGAAGAAATGTGTGCCGCATGCCCGGGGTGGGCATGAA
GGCAATACGGAGCTGACGCAGCAGGTTCGATGACTGACGATGTTGAAGAA
TTGCACGTGTGAAGGCCACGTGCCAACTGCAAGTTTGAGTCGCTGATGTG
GAGAAGCTGGAGGGGAAGGAAGGCAATGTTGAAGAATTGCACGTGTAAAG
GCCACGTGCCAACTTCAAGTGTGAGTCGTTGATGTGGCGAAGCTGGAGGG
GAAGGAAGGCAATTCGGAGCTCACGCAGCAGGTGCGATGATTTGAACATC
ATAAGATACAAATGTTTTAGGGGCTGTGCGGCGCCTTCATGATGGCTCAA
AGGACTTCATTTGCCACACTGCAACTTCAAGTGTGAGCCACTAAACTGGA
GAAGCTGGAGGGGAGGGAAGGCAATGCAGAGCTGACACACAGCAGGTGCG
ATGATTTGATGTTGAAGCATTGCCCGTGTAAAGGCCGCATGCCATCTTCG
AGTGTGCGCCACTGAGTCTGGAGAAGCTGGAGGAGAAGGAAGGCAACGCG
GAGCTGACGCAGCATGTGCGATGATTGATGTTGAAGAAAAATTAGAAGTA
TGAAATTATTTTTTACTGGTAGTTCAGTGTGAGCTGGATTTGACGATGTT
GAAGAAGAACTCAACGATTACATTCTACATGTAACTTTGTGTGGGCTGAA
AAAGTTATAGAACTTGATTGTTTCAGTTTTTCAAATGCAGACACTTTCCA
TCCAGTACACTCAAGACCAACATGTTCAGAAGTTGTAAAGGCCACGTGCC
AACTTCAAGTGCGCGCCATTGATTTGGCAACGAAGAAGAAGAGTTTGCCG
CACGCCCAAGAGGATGGGCAGGAAGGCAACGCGGAGCTGACACAGCAGGT
GCAGTGCTTTATTGAGACGTGGGGAGTTTTGGGGGGTCTCCATGAGAGTT
CAAAAAAGAAAAAAAATGCCGGTAACTTCAAGTGTGAGCCGTTTTTCACG
CATGTACCAAGCTTCGCGAAGCAGACAGGTGCCTCGCACCCAGGCGCGCG
ATACCATACATGCATCCCTACAGAATGGACCGCGCCCGGTAGCCTCATCT
ACATGCGATTGCTGCAACCAGTCATGGTCGCAGACACACACAGCCATTGT
CCCCACAGAGAACACTACGCCCAGTAGCAATCACTGCGCTCGAGTATATG
TGTGCGTCTGAACTCCTGTTCTGAAACTGTCATGTTGAAGACCGCGTGGC
CGGCTTCGATCTGCGCATTTCCACCGTGTATTGTACTTCAAATTTGAGCT
GCAGCACAGCAGCCGAATGAGGCGCCCCAACCAGTCCCGCGATACTCACA
GTCATCGTCTCTTTACATAGAGCAAGCACACTACGCCCGGCGCCAGTCCC
GTGCTCACGTATGTGTGTGCGTCTACACTTTGATTTGAAAAACTGTCAGG
GTGAGGACCTCGCAGCCGCCGTGGTGTCGCGCAGTTGCTACCGCATTTTC
CGAATGTGATGCACCCTTGCAGGCAGTTCGCGCTCACCCTTGCAGGCAGT
TCGCGCTCACGAGTTGAAGTCTGCACTCCTGGTTGAAGACTGTCAGGTTG
GGGACCTCGTGGTCGCCTTCAAGCCGCGCATTTGCACCATGTACCGTACT
TCAAGTTTCTGCTGAAGCACGTCAAGCCGAAATGCGATGCCCCACACACA
CAGTCATTGTCTCAACAGAGTACACTACGCCGGTGGCAGTTCCATGCTTA
TGTATGTGTCTGAACGCCATGTCAAAAACTTTCAGGTGGAGGACCTCGTT
GCCGCGTTTAAGCCGGGGAAGACGCTCAGCATCAACGCCAAGGTCAACGC
CAAGGACACCGCTGGCGCGGCCGCAACCGCCGCAAGTGAAGTTGAAGCTG
AAGCAGAAGTTGAAGAAGCGGGCGAGGACGCTGCTAGCAGCGATGCCGAC
GCTGGCGCCGCCGCGGCGCCCGCAGAGGCAGCGGTGAGTCACAGTTTGCG
CTTTGATAGCTTCAACATGTATCACTATCCGAGGTTCACGTTAGTGTGGT
AATGCCTGAGCGCTGCCTTGCAGCTGAAGAACAGAGGAGGGCTAGATGAG
AGCAGGTGGTGTCAGGGTTGGAGTGACTCGCAGCTGAAGGTTTGGTTGTG
GAATCACCAAGCCCGTGGTAGCTGAACGCCGCTGCCGATAGCTTTTTTTG
TTTTGTCTACCACATCAGGCGGAATTGGGCGAGATGCGTCAGAGGTTGGG
TTTCCATCGTCGACAGACACGTGAAAACCGCCAGCAAAGCAAGCATAGCT
GCTCCTGACCCTAACTCTAACCCTAACCTAACCCTAATCCTAACCCAACC
CCGTGGAGGAATCATCTGCGTTAAGGCTGGCTACGGCCCTGCTGTGCTGA
ACTCTCAGTCTGTTGCTGTGCGGTGGCAGTTTGCCCAGGTTGTAGGGGGT
TGCTGACACAGGATTTGGTGTTGTTCGAAAGTACATTATCATTGTTGTGA
TGCTGGCGTCCGGCTGAGTGGTTTAAGCTGCGCACTCGTGGGGCTGACAA
GGCCTTGAACGCGAGTTCAATTCCTACGGGAAGCACAGTGTGAACAGTCA
AAAACAACTAGCTTCGGCAACCTATGAAAAGATGTGTGATGCCACGCGCA
TCTGTGCCGCCAAGTGCACAAGAAGTGGTTAGGGTTAGGGTTAGGGTTAG
GATTAGGGTCAGGTTAGCCACGCAGCAGCCAGCGTCAATGACAGCTGACC
TGGCCCATCCACATAGCCTGTGGTCGCTGATCTGGCCGGCGTTCGCGAGG
CCAGGCTCACAGCACCCGCGTTTCCGGTCGTCTGTGATCATGCGCACTTC
ACCATGTAGTCTGTGTAGCCTAGCTTACAGTCTTGTACGCGCACAATGCT
GATGTTTGGCGCACTGCTTAAATGTATGCATCGGTGCTGCTGTACACGCA
GGAGGACTTTTACAGCTGGCAGACAGTTCGGCGAAGGTGACGTGCCGCCC
CGTTGGCGCCCCACGGCAGCGGAAGAGCTCCCGATCGCCACCATCACAAA
TAGAAACTGCCAATTTCCTTA

Coding sequence (CDS) from alignment at Contig_7:57742..63762-

>mRNA_2486 ID=mRNA_2486|Name=jgi.p|Trimin1|85478|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=702bp|location=Sequence derived from alignment at Contig_7:57742..63762- (Tribonema minus UTEX_B_3156 )
ATGGCGGGCACGATGACGCAGCTGGCGCTGCTGGTGGTGGCCCTGCTGGC
GCCCAGCTCGCTGGCCTTCGTGCCATCTGCGCTGAGCATTGGCAGCGGCA
GCAGCAGACATGCCGTCAGGATGACTGCTGCTGTGGCAGGAGAGCCGCTG
GCGCACGCCATGGACGGAGTCAAAGCCACTAGATTGGAGGCCGTGGATGA
GGCTGCGGGAATATACCAATACGAGTTTGAGATTGAGATTCAGGGCGACG
TTACGCAGAACATTTACAACGGCATTGAGAAGGAGCTGCGTAAGAAGGCG
GCGTTTCCGGGGTTCCGCAAGGGGCAGATCCCCCCCTTTGCGCGAAAACA
GGTGATCACCTTCAGCGTGGAGGAGGCTGTGAATGAGAGCCTCATCAGCG
CGCTCGCGGCGCACGGCCTGGAGAAGCTGGAGGGGAAGGAGGGCAATGCG
GAGCTGACGCAGCAGGTGGAGGACCTCGTTGCCGCGTTTAAGCCGGGGAA
GACGCTCAGCATCAACGCCAAGGTCAACGCCAAGGACACCGCTGGCGCGG
CCGCAACCGCCGCAAGTGAAGTTGAAGCTGAAGCAGAAGTTGAAGAAGCG
GGCGAGGACGCTGCTAGCAGCGATGCCGACGCTGGCGCCGCCGCGGCGCC
CGCAGAGGCAGCGGAGGACTTTTACAGCTGGCAGACAGTTCGGCGAAGGT
GA