mRNA_2293 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|72195
Unique Name	mRNA_2293
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|72195 vs. uniprot
Match: A0A836CBL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL5_9STRA)

HSP 1 Score: 892 bits (2306), Expect = 0.000e+0
Identity = 569/569 (100.00%), Postives = 569/569 (100.00%), Query Frame = 3

Query:  177 MRVRDDDVFVTAEATDALGDSTEDWALLEQMRPEEEADGAPDASSPAAGDSTSPQLSEIRQADAPKSTEEAAYAPTVAPASTVSSPATDGVADSGADTEGNQTGPPLRERVAAAASAARRSISAHAVLRFIFMTALHVLMTVSTLWVLGVPMGVGRGPMHGGGRALGXXXXXXXXXXXXXXXXFRRQKRLCAIEKRLAEQADIIENLETIAVNFDEQLTSLQSGEKDLKDQVATMXXXXXXXXXXLRSRVDVKEXXXXXXXXXXXXXXXXXXXXXXXXVSNEEHDDASFQDIFASLNCIPSFDDVSAMLDAHASAEDTKAMDPLLFMQQVEPRMAAKAAQVAEAVVRDRAVAWRNEAKSHLDAMKTELLGEALPQATEAATLAVRAELLPAVIGVERRITEVLHTVDGVADRADAAARKAVQAVAAELEDSLHKVKKDMSELRKDFKDAKHKYKADFKSGTTVXXXXXXXXXXXXXXXXXXXXSDAIKSKRKTEDCDASASVTEVRLDVLQTDMENATGHLATLDGRVKDIENHLLGDGQRHSTTSDVMARLVDEFEQWKRDSLSFFDW 1883
            MRVRDDDVFVTAEATDALGDSTEDWALLEQMRPEEEADGAPDASSPAAGDSTSPQLSEIRQADAPKSTEEAAYAPTVAPASTVSSPATDGVADSGADTEGNQTGPPLRERVAAAASAARRSISAHAVLRFIFMTALHVLMTVSTLWVLGVPMGVGRGPMHGGGRALGXXXXXXXXXXXXXXXXFRRQKRLCAIEKRLAEQADIIENLETIAVNFDEQLTSLQSGEKDLKDQVATMXXXXXXXXXXLRSRVDVKEXXXXXXXXXXXXXXXXXXXXXXXXVSNEEHDDASFQDIFASLNCIPSFDDVSAMLDAHASAEDTKAMDPLLFMQQVEPRMAAKAAQVAEAVVRDRAVAWRNEAKSHLDAMKTELLGEALPQATEAATLAVRAELLPAVIGVERRITEVLHTVDGVADRADAAARKAVQAVAAELEDSLHKVKKDMSELRKDFKDAKHKYKADFKSGTTVXXXXXXXXXXXXXXXXXXXXSDAIKSKRKTEDCDASASVTEVRLDVLQTDMENATGHLATLDGRVKDIENHLLGDGQRHSTTSDVMARLVDEFEQWKRDSLSFFDW
Sbjct:    1 MRVRDDDVFVTAEATDALGDSTEDWALLEQMRPEEEADGAPDASSPAAGDSTSPQLSEIRQADAPKSTEEAAYAPTVAPASTVSSPATDGVADSGADTEGNQTGPPLRERVAAAASAARRSISAHAVLRFIFMTALHVLMTVSTLWVLGVPMGVGRGPMHGGGRALGXXXXXXXXXXXXXXXXFRRQKRLCAIEKRLAEQADIIENLETIAVNFDEQLTSLQSGEKDLKDQVATMXXXXXXXXXXLRSRVDVKEXXXXXXXXXXXXXXXXXXXXXXXXVSNEEHDDASFQDIFASLNCIPSFDDVSAMLDAHASAEDTKAMDPLLFMQQVEPRMAAKAAQVAEAVVRDRAVAWRNEAKSHLDAMKTELLGEALPQATEAATLAVRAELLPAVIGVERRITEVLHTVDGVADRADAAARKAVQAVAAELEDSLHKVKKDMSELRKDFKDAKHKYKADFKSGTTVXXXXXXXXXXXXXXXXXXXXSDAIKSKRKTEDCDASASVTEVRLDVLQTDMENATGHLATLDGRVKDIENHLLGDGQRHSTTSDVMARLVDEFEQWKRDSLSFFDW 569

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|72195 vs. uniprot

BLAST of jgi.p|Trimin1|72195 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CBL5_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_5	contig	Contig_5:489582..501467 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|72195\|CE72194_170
Hectar predicted targeting category	other localisation
TranscriptId	72517
Track	FilteredModels1
ProteinId	72195

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|72195	gene_2293	Tribonema minus UTEX_B_3156	gene	Contig_5 489582..501467 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|72195	Trimin1\|72195\|CE72194_170	Tribonema minus UTEX_B_3156	polypeptide	Contig_5 489748..501291 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_2293_13	exon_2293_13	Tribonema minus UTEX_B_3156	exon	Contig_5 489582..489858 -
exon_2293_12	exon_2293_12	Tribonema minus UTEX_B_3156	exon	Contig_5 490807..490857 -
exon_2293_11	exon_2293_11	Tribonema minus UTEX_B_3156	exon	Contig_5 491391..491426 -
exon_2293_10	exon_2293_10	Tribonema minus UTEX_B_3156	exon	Contig_5 492051..492260 -
exon_2293_9	exon_2293_9	Tribonema minus UTEX_B_3156	exon	Contig_5 493130..493279 -
exon_2293_8	exon_2293_8	Tribonema minus UTEX_B_3156	exon	Contig_5 494238..494321 -
exon_2293_7	exon_2293_7	Tribonema minus UTEX_B_3156	exon	Contig_5 494824..494943 -
exon_2293_6	exon_2293_6	Tribonema minus UTEX_B_3156	exon	Contig_5 495901..496002 -
exon_2293_5	exon_2293_5	Tribonema minus UTEX_B_3156	exon	Contig_5 497830..497913 -
exon_2293_4	exon_2293_4	Tribonema minus UTEX_B_3156	exon	Contig_5 498701..498784 -
exon_2293_3	exon_2293_3	Tribonema minus UTEX_B_3156	exon	Contig_5 499288..499350 -
exon_2293_2	exon_2293_2	Tribonema minus UTEX_B_3156	exon	Contig_5 500502..501026 -
exon_2293_1	exon_2293_1	Tribonema minus UTEX_B_3156	exon	Contig_5 501202..501467 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_2293	UTR3_2293	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_5 489582..489747 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_2293	CDS_2293	Tribonema minus UTEX_B_3156	CDS	Contig_5 501202..501291 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_2293	UTR5_2293	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_5 501292..501467 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_5:489582..501467-
coding sequence from alignment at Contig_5:489582..501467-

spliced messenger RNA

>mRNA_2293 ID=mRNA_2293|Name=jgi.p|Trimin1|72195|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2052bp|location=Sequence derived from alignment at Contig_5:489582..501467- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGTGTTTGGAGGCAGCTTCCAGGTGGCACACTCACTGTCCTGGAGAGAGG
CGCTGTTAACCGGAAGCACTTTAAAACCGAGTGCTCTGGACATCAGCTGC
GCTGCCTCTGGCTGCGACGGTAACTGGAGCTCGGGTCAAATCTGAACCAG
GTTGAACAAACAAATCAAAGCACAGCATGAGAGTGCGCGACGATGATGTC
TTCGTGACAGCTGAGGCCACGGATGCGCTGGGAGACAGCACTGAAGACTG
GGCCCTGCTGGAGCAGATGCGCCCAGAGGAGGAGGCTGATGGCGCACCCG
ACGCATCCAGCCCTGCTGCTGGCGACTCTACCTCTCCCCAGCTCTCGGAA
ATCCGCCAAGCCGATGCACCAAAGTCCACAGAGGAAGCGGCTTATGCTCC
GACCGTGGCGCCTGCCTCCACGGTGTCGTCGCCAGCCACTGATGGTGTCG
CGGACTCCGGCGCTGACACGGAGGGGAACCAGACCGGTCCTCCGCTGCGC
GAACGCGTCGCCGCTGCCGCCTCCGCAGCACGGCGCAGCATCAGCGCGCA
CGCCGTGCTGCGGTTCATCTTCATGACGGCCCTACATGTGCTGATGACGG
TCTCAACGCTCTGGGTGCTCGGAGTCCCCATGGGAGTCGGTAGGGGCCCC
ATGCACGGCGGCGGCAGGGCCTTGGGTGGCGGCGGCGGCGGCAGCGGTGG
CAACGGCGGCGGCGGCAACGGCGGCTTCAGGCGGCAGAAGCGCCTCTGCG
CGATCGAGAAGCGGCTGGCAGAGCAGGCGGATATCATTGAGAACCTTGAG
ACCATAGCCGTCAACTTTGACGAGCAGCTGACCAGTCTGCAGTCTGGGGA
GAAGGACCTCAAGGACCAGGTCGCGACCATGCGCAAGAACTTCAACTTGC
AGTTGACCAACCTGCGCTCCAGGGTAGACGTGAAGGAGGACCTCAAGAAC
CGGATCGCGGACATGGGCACGAACTTCAATTCGCAGCTGACCGAGCTGCA
CGCCAGGGTGGTCTCCAACGAGGAGCATGATGACGCATCGTTCCAGGACA
TCTTCGCCTCGCTGAACTGCATCCCCTCCTTCGATGACGTGAGCGCCATG
CTGGACGCACACGCGAGCGCTGAGGACACCAAGGCGATGGACCCCCTGCT
CTTCATGCAGCAGGTGGAGCCGCGCATGGCGGCCAAGGCGGCGCAGGTGG
CGGAGGCGGTGGTCAGGGACCGCGCCGTCGCATGGCGCAATGAGGCAAAG
AGCCACCTGGATGCGATGAAGACGGAACTGCTGGGCGAAGCGCTGCCGCA
GGCTACGGAGGCAGCCACCCTCGCCGTGCGCGCGGAGCTGCTGCCCGCGG
TCATCGGCGTGGAGCGGCGCATCACGGAGGTGCTGCACACGGTGGACGGC
GTCGCCGACAGGGCCGACGCCGCGGCGCGCAAGGCCGTGCAGGCCGTCGC
CGCGGAGCTCGAGGACAGCTTGCACAAGGTCAAGAAGGACATGTCGGAGC
TCAGGAAGGACTTCAAGGATGCCAAGCACAAGTACAAGGCGGACTTCAAG
TCCGGGACGACCGTCGGCACAGGCGGCGGCCATGGCAGCAGCGGCGGCAG
CAGCGGCGGCAGCGGCGGCGGCAGCAGCGACGCCATCAAGAGCAAGCGCA
AGACGGAGGACTGCGACGCGAGCGCGTCGGTTACGGAGGTGCGCCTGGAC
GTGCTGCAGACGGACATGGAGAACGCCACGGGGCACCTCGCCACGCTGGA
TGGGCGCGTGAAGGACATTGAGAATCACCTCCTTGGCGATGGCCAGCGCC
ACAGCACCACCAGCGACGTCATGGCGCGCCTCGTGGACGAGTTTGAGCAA
TGGAAGAGGGACTCCCTGTCGTTCTTCGACTGGTGACGCCCCCCGCTGCT
CGCCAGCTGCGCGCAACGGCACGCTCTGATAGCGTGCGCAGGCAGTTCAG
ACGGTGCGCTGTGAGCAGATATCTGGCTGCAGCTGTTTGGGTTGTCCTAC
TGTAGGGCGACGAACTGCTAGCTGGGTCGACAAGAAAGAATGTAGGGGTT
GC

protein sequence of jgi.p|Trimin1|72195

>Trimin1|72195|CE72194_170 ID=Trimin1|72195|CE72194_170|Name=jgi.p|Trimin1|72195|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=570bp
MRVRDDDVFVTAEATDALGDSTEDWALLEQMRPEEEADGAPDASSPAAGD
STSPQLSEIRQADAPKSTEEAAYAPTVAPASTVSSPATDGVADSGADTEG
NQTGPPLRERVAAAASAARRSISAHAVLRFIFMTALHVLMTVSTLWVLGV
PMGVGRGPMHGGGRALGGGGGGSGGNGGGGNGGFRRQKRLCAIEKRLAEQ
ADIIENLETIAVNFDEQLTSLQSGEKDLKDQVATMRKNFNLQLTNLRSRV
DVKEDLKNRIADMGTNFNSQLTELHARVVSNEEHDDASFQDIFASLNCIP
SFDDVSAMLDAHASAEDTKAMDPLLFMQQVEPRMAAKAAQVAEAVVRDRA
VAWRNEAKSHLDAMKTELLGEALPQATEAATLAVRAELLPAVIGVERRIT
EVLHTVDGVADRADAAARKAVQAVAAELEDSLHKVKKDMSELRKDFKDAK
HKYKADFKSGTTVGTGGGHGSSGGSSGGSGGGSSDAIKSKRKTEDCDASA
SVTEVRLDVLQTDMENATGHLATLDGRVKDIENHLLGDGQRHSTTSDVMA
RLVDEFEQWKRDSLSFFDW*

mRNA from alignment at Contig_5:489582..501467-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_2293 ID=mRNA_2293|Name=jgi.p|Trimin1|72195|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11886bp|location=Sequence derived from alignment at Contig_5:489582..501467- (Tribonema minus UTEX_B_3156 )
CGTGTTTGGAGGCAGCTTCCAGGTGGCACACTCACTGTCCTGGAGAGAGG
CGCTGTTAACCGGAAGCACTTTAAAACCGAGTGCTCTGGACATCAGCTGC
GCTGCCTCTGGCTGCGACGGTAACTGGAGCTCGGGTCAAATCTGAACCAG
GTTGAACAAACAAATCAAAGCACAGCATGAGAGTGCGCGACGATGATGTC
TTCGTGACAGCTGAGGCCACGGATGCGCTGGGAGACAGCACTGAAGACTG
GGCCCTGCTGGAGCAGGTGAAAGGCGCTGTTGCAGCGCGTCTGTGCTACA
TGATGTGCTGGCATGCTGAACATCAACCCATGTTGCCATTTCTTTAGTGG
ATCGAGCCACCTGCCGCGATTGTCAGGTCGCATTTCCTTTCTTCTTCACT
CAAATGTAGTTTCTCATCTCTCCTGCAATCTTGGCTCGCAGATGCGCCCA
GAGGAGGAGGCTGATGGCGCACCCGACGCATCCAGCCCTGCTGCTGGCGA
CTCTACCTCTCCCCAGCTCTCGGAAATCCGCCAAGCCGATGCACCAAAGT
CCACAGAGGAAGCGGCTTATGCTCCGACCGTGGCGCCTGCCTCCACGGTG
TCGTCGCCAGCCACTGATGGTGTCGCGGACTCCGGCGCTGACACGGAGGG
GAACCAGACCGGTCCTCCGCTGCGCGAACGCGTCGCCGCTGCCGCCTCCG
CAGCACGGCGCAGCATCAGCGCGCACGCCGTGCTGCGGTTCATCTTCATG
ACGGCCCTACATGTGCTGATGACGGTCTCAACGCTCTGGGTGCTCGGAGT
CCCCATGGGAGTCGGTAGGGGCCCCATGCACGGCGGCGGCAGGGCCTTGG
GTGGCGGCGGCGGCGGCAGCGGTGGCAACGGCGGCGGCGGCAACGGCGGC
TTCAGGCGGCAGAAGCGCCTCTGCGCGATCGAGAAGCGGCTGGCAGAGCA
GGCGGATATCATTGAGGTATGGTTGAATAGTTGTGGCCATGTTTGATCGT
AGTTTCTTGTGGCTGCTTGGCGGCGTTGAGTAACGTGTGACCAGGCGTTG
CCCTACCACTGCTGCCACATGCAACGTCAGCAGCTGTTGCTAGCTGAGGA
AGGCATCGTGTGCGCAATGTTGGCTGCGGGCAAGTAGGTTTATTTCGGGT
AAACCTAATCCCAAGGTAGATAGTAGTATGTAGTAGGCAAGGGGTAATGG
CAGGCACATGTCTGCTCTGATCATCCGGACCTGATGAGATGTGCTGAGCC
ATCGCCTGCGTGTCACCGGTGGAGGGGGCGTTGGAGCGATGCTGCAGATT
GAAGCAAACTTGAAGTAGTTGAATTGAAGTACGGGATGACAGGCCCCATC
TGGTTTATGGAGCGGACGCCAGCGACAAGTGCGACCAAACACCGTGATGC
ACGCGACGCATTGCCCAGCGTTGACGCACTTATGCAGACGGCATCTTGCT
GACACCAAGAGTGGTGCACGGGCTCTGCCTGCTCGCGCGATGCGCAAATA
CTTCCTGCGTGCCTAGCATATGTTATACATGTAGATGTACTGGCAGCCCC
ATGTGCAAGAGCACTTACATCATGACCGCAGGACACGATGCCCAGCTTTG
CCGCATTTGCGCAGATCTCATCTTGTTGACTTACAGAGCAATGCATGGGG
CAGGTCAAATCCTGCGAGCGCAGCATGCGTACTATAGGAATACATGTACT
GACCTATGTGCAAAGGCACTGTTCTCGGGCTGTGCCACACGTGCATCTTC
GCCTCATTTCAGCCCCAGCATTCGCCTTATTCAGCTGCTAGCCTGCACAG
CTACTCGCGCGCTGCGGTCCACTGCCCGCCGCACACGCCGCCGCATGTAG
CAGTGCGTGGCGGTTTTTGACATTGCCTGTCGTCGCTATGTCGCCGGGGG
TGACGCCCCTGCTGTGCCTCAAAGGCAGCCCACTACAAATTGAAGTCACA
GGAGGCAGATCCTGAATGGTGACGGTGTCGTTCCTTGCAGCTGTTACGCT
CTGCAGATGGCACTAACGTGCGGATGCCACGACCTCGATCAACCGAAATG
CCATGTGCGCCATCGTCTGATCTGCTTTTGTCCTGATACGTGCATACATA
TCGTCGCTGTGCCGCAGAACCTTGAGACCATAGCCGTCAACTTTGACGAG
CAGCTGACCAGTCTGCAGTCTGGGGAGAAGGTGAGATACTAAAACCTATA
TCTGGAAACGAATCGATAGATCGTGGCTCCAGGTGACAAGTTGTGGTTAG
CCGCCAGTGCCTTTCACCAATAACCGTGGTCAGCAATTGGCCACGAGTCC
ACCAGTGATCTAAGGTTTTTGTAGCTTCTATGCTGATGACCGCATTGGTC
CTGTAGCCAACGCGCTCTGTGGATGGCATTTTCTGGCATCGCGTTGTAAG
CGCATTGGAACGTCTCTCTCGAGCCTTTGCCTGCATGGGTGTACCCTGAT
ACGTCCATGAAACCAAATCAAAAGATCGTCGAGCTCTAGGCGACACGGTG
TGGTGAGCCGTCACATTGAATGCCTTCCACCAATGCCCGTGGTCGCTGCT
GCTGCAGCAATCGGCCGAGTCAAACAGTGCCACCATATCCACAGTAGCAA
AAAGACGTCCGTGTGCAAGCTTTCGAGCGTTCGAGCATGGGTGTTCAGTA
CATACCGTATGTAACATACGTACTGCGCCGCAGGACCTCAAGGACCAGGT
CGCGACCATGCGCAAGAACTTCAACTTGCAGTTGACCAACCTGCGCTCCA
GGGTAGACGTGAAGGAGGTGAGCGCTGCAGCTTGCGGCCAGGCCGCACCT
CAAGTAGATTTTCAAGTTTGAAGTTGATCTGAACCGTTAGCGCGTCGCTG
ACAACGCTCGGCGGGCTGCTGCTTGAGCACAGATGACGCAGTGCGAAGCA
GTGCGCACTGTGTGTGCGTCACTTGAAGTTGGGTGGCGGATCGAAGAGGC
GGATTGTGAAGTACTTCACGCGAAGTACATTGTGACAGGGCCGCCTACTC
AATGGAGCGGAGGCTGGCAACGCGCGCAATCAATCGTGATGATGAATGCA
ATGTGGCGCTGGGCGTTGACGCGTGTGCACAAACCTCATGGAAACGAATC
AAAAGATTGTCGAGCTCTAGGTGACAAGGAGTGGTTAGCCGCAAGTGCCT
TCCACCAATACTTGTGGTCGCCGCCGCTGCAGTCATTGGCCGCGAGTCAA
ACAGTGCCATCATATCCACAGTAGCCAAAAGACTTGTGTGTGCAAGCTTT
CTAGCACTCGAGGCAGCTCCTTCAAGAAGCCGCACGAAAACCCAGCACAT
CACTGTGCTGCTGCGAAAACATGTTTTATTGCCCTTAACCCTAGTTAAAC
ACTTCAACCTTTCTTGTGAACTTCAACAACACCCCAACCCTAAAGCCTAG
CCGGTAGTACCGCATGGTAACAGTATTCCGGCTAGTATTAGATTCGTAAG
TTTGTACGTACTCAAAACAGCCGGCATACACCACACTGGTGCCATCGCCT
CAGCTGCTGCTTGTCCCAATTCGCATATACGTGCCGCGGCGCTGCGCCAC
GCAGGACCTCAAGAACCGGATCGCGGACATGGGCACGAACTTCAATTCGC
AGCTGACCGAGCTGCACGCCAGGGTGGTCTCCAACGAGGTGAGCGCCGTA
CCGTTCGGCGGAGTCGCTCACACCTCGCTCATGTACTTCAAATTTGCCTA
CTTCAAGAAGCATTTGAAGTTGATCAATCAGAAGTCACCGTGGTCCTCAG
TTCTGGGCACTGTCAAAGGTCACCTAGGCCTGCATAAACCTGTCTCAGGA
CGGGGCATGTGTGCCTCGCAGCTGGGCAACCCTCAGTAGGGTTTGGTTGA
GGGGGTTTCGCGGCAGTGCTGAGAGGGTGCCTGCTGTTGTTTGAGTCTCT
CTTCGGAGAAAAGAGTGGTGCATTGAGTGCACATTCACACAGAGGGCTTT
TCGCGTCCCTCGCGAAAAGAAATAAACAAATTTAAAGTTGATCAAATTGC
TAGCCATCTTGCAGACTGCGGTGCGCGATGGCTGAGCTGGCTGCGCTGCG
AGACGCGAGCCAGCACGCGCGCGTTGAGCACTTGCCGGTGGCGAGAGAGA
GCTGACTAGGGACGCTCACCGCTTGCCACATCTCTTAATTTAAGAAGGGC
ACTGTGTGACGGTAACGTGTGTGTCTGTGCGACGCAACTTGAACCGCCAC
ATCTCTCATCTGAGCAGGCCGCAACTTGTGTGTGTGCGAGGCAACTTGAA
GTTTGCGGTGCGCGAGGCAACATTGCTGCAGGCTGACACAGCAGTGCAGT
GCGTGAGCCTGCGTGTGCTGGTTGACTTCACCCCAACCCAAACCACCACC
GTAACCCTCACCCTAACCTTAACTCATGGTTCGTATGCGCCAAGTACACC
AAAGTACACGTGCGTGCCTATGAGCTGCACTGCCTGTCTGGTGGGCTTTT
TACGCCGTTTGCAAAAAACTCATGCCTCGTATGCGCAATGTACTTCAAAG
TACACGTGCTTGCCCACGAGCTGTACTGTCTGTCTCATGGGCTGTTTACG
CCGTTGGCGAGAACCAGCGAGAAATACAGAAAGCGATTGCCATCGAGACA
CTTCCAAACCGACACGTGACATGCAGATTCCGTAAGCTCAGGGCTTTTTC
GCGCCCTGAGCGAGCGAGCATCAATATATGGAAAAGTACATGTAGCGCAC
CGCTGACGCGCGGCAACACACGACACTTCAATATCCCATCTACACCTCCA
GTATCATGCCCATGTCAGAATGTGTAGCAGGTTGTCAAGAGTCTGCTGTT
AAGTTAGATTCTGCAATGTTTGCCTGGTGGGCTTTCTACGCCGTTTGCAA
GAATCAGGAAGATGTACAGACGCGCGCCGCTGACGCGCGGCAACCATACT
GCGTCATTTCAATATCCCATCTGCACCTTTAGCATCATGCCTATCATGTA
ACAGTTTGTAGCAGGTTCTCATGAGTGCGCTCTTAGGTAGACCCTGCAAT
ATTACTTTAGCCTGTTAGACCCTGCAAGACCCAGCTAACAGCAGACAGAC
CCTGAGAGCCTGCTGTTCCTTACAAGTCACTGGGGCTGCTTTGCACATGA
ACACGAATTTAGTCCAATTGGTCTGAAAAAAAACAAGAGCGCATTGGTAA
TGCTCTGCCGCTGATTCCTTGCGTTCCCTGTTTTGCTCACGATACAAAGA
TCAGCGCAAGAACTGAAGTGCACTGATGCTGTGTTGCTGACTCGTGCATT
CCCTGGCCTAACATCGACACTACCCGCTGGCCAGTCTTGATCCTGCAGGA
GCCAGCTCACAGCAGTCCCCCCTGAGAGCCTGCTGTTCCGACAATCACTG
GGGCTGTTTTGCCCACGAAAGGAAGATTAGCACACGAACAGAAGCGCACT
GACGCTCTGTTGTCAACCTTGATGCGTGCCCTGTGACCTAACCCTAACCC
TAACCCTACTTGCAGGAGCATGATGACGCATCGTTCCAGGACATCTTCGC
CTCGCTGAACTGCATCCCCTCCTTCGATGACGTGAGCGCCATGCTGGACG
CACACGCGAGCGCTGAGGTGAAGACCTAGGTTTAGGGTTGAGGCCGCCTG
AGCCCGAGTGCTGAGGCGAGGACCTACGCGTAGGGTTTACATCAGTAACA
TCAGAGGATTTGTAAGGCAGCGGGGATGTGGGGTCAGGGGTGGGGTGGTC
ACAGGGTTACATTCAGCTTTGCACAATCCTCAGGCCGCGCCCTGCACTGT
TGTGAACCAGACGGACACGATGCGGGGCGAGGGTCATGTAGGGTTCGGGT
TAGGGTTAGGGTTTGAAGTTCTGCTGCTCAGCGGATGCTGTGGCGGGATG
GCGTGGGGTCAGGGTGAGCGCTTAGGGTGTGGGCTGAGTAAGCATCGCAT
TAAGGTCAGGGTCGGGGTCACATTCGCCATACACACATCCTGCGCTGTTG
TTGCCGGGCAGGTCAAGGCGACGAAGCCTCCCTGCTGAGCCTTATATCTA
TGCGTCGTGCGCCTTTGTTGCCCGCAGGACACAAAGGCGATGAACTCCCT
GCTTTAAGCCATATATACGTGTCGTGTGCTAAGCCATGTATACGCGTCTT
GCGCTGTTGTCGCCGAGCAGGACACCAAGGTGATGACCCCCCTGCTCTAA
GCCATATATATCATCGTGTGCTAAATCATGTATACGCGTCGTGAACCCCG
TGCTTTAAGCCATATATATCGTCGTGTGCTAAACCATGTATGCGCGTCGT
GAACCCCGTCCTTTAAGCCATATATATGCGTCGTGTGCTAAGCCATGTAT
CAACGAACCCCCTGATCTGAGTCATGTATATACGTGTTGTGTGCTACACC
ATGTATACGCATCGTGCACTGTTGCCGAGCAGGACACCAAGGCAATGACC
CTGCTGTTGCGGAGCAATACACCAACACGGCGAACCCCTTACTCTAAGCC
ATATATACGTGTCGTGTGCTACGCGTCGTGTGCTAAGCCATCTATACATT
TTATGTAATGTTGTCGCCGAGCAGGACACCAAGGCGATGGACCCCCTGCT
CTTCATGCAGCAGGTGGAGCCGCGCATGGCGGCCAAGGCGGCGCAGGTGG
CGGAGGCGGTGGTCAGGGACCGCGCCGTCGCATGGCGCAATGAGGTATGT
ATGTATATGTGTACGTATATGCATGTTTTTGTGAACTCCCAATGTACTTT
CCAAAGTGCATGCTTTGAACCTTATATAGAAGTATGATGGAGTGCGGTGT
GCAGGCTTTGCGTGCTGCATACGCAATGAAGTACTTCAAGGTATGCTTGT
GTGCGTGTACTCGGAAGTATATGTATGGCGGAGTGTGGTGTGCAGGCTTT
GCATCCTGCGTAACAGAGCAATAAGTGGTGTGTGATCAGCGATCCTTTGA
GATGCGCACTTCTACAGCACCATGTGGAAGATTCTCGCAAGCACTTACTC
GACGCCCTAGTTCAACCACTGTAGGGCTTACCGCTACTTCAAGACCTAGG
TAGTCCGCCGCGAAGCACATCATCAGACGGCCCATCATGATCCACTGCTA
CGCGTGTGAGCGTTTGCGGCCACCTAGCTTCAGCACAGTCATGACCTGGC
TTATATTAACGGCGCAGCGGCCGCGCGCTTGCCGCTTTCGGTGCAGGCAA
AGAGCCACCTGGATGCGATGAAGACGGAACTGCTGGGCGAAGCGCTGCCG
CAGGCTACGGAGGCAGCCACCCTCGCCGTGGTGAGTTTTTCAACTTCTAA
CTTGAAGTTGAAGAAGTCGTCGGTTGCTCTGCCCAGCACCTGGCGTCGGT
GCACACGTGGTGTCGGTGCGCGTGGTCATCACGCGTCCGCGGCCGCCAAA
AGCGCGGACAGTTCTCTGAGCTCTGTAGTATATAGCAGTGCTCGCTGCTG
AAAGCACGCGTATCGCCGCTGGTATGCCTTCGTCCATGCTGCAGAGGGCG
CAGCCGCTGCCTGCGGCGGTGAACACCAAGCAAGAATGTAAAGTTTGCTG
AGCGTCGCTGTCGCAGTTGTTGGAAGTTGAAGTTGTCAGTTTTGCAGAGT
GCGAGGTGCCCCCGCGCGACAGCATCGCAAAGGCGCTGCGTCGCGGATGC
CGTCATTCACTGAGCTCTGTGATAGCGGCGCTTGCTGCGCTGCCATTCGC
GCACTGCTGCAGCACTGCCTTTGCCAGGTGCTGCACACGACGAGTTAGGG
TGAGGGTTAGCGTTAGGATCAGGGGTGGTTTAGGGTTAGGGTCAGGCTGC
AGTCGCCTGCCAAACCCCAATGTTAAGCTCACTTTGCCAATGTGGAGCAT
TGCTTTGCCAACGTGGAGCATTACTTTGTCGAGCTGTTGCTGCTGCCAAT
GCCTCTGCTCGTTCCGCTGCCGTTCGCCTGCTGAGCGCTGCTGCCGCTCA
ATACGCGGCGACAGCTCTGCTGCGACTCCCCCTCAGAAGCGCCGCGATGC
TGAGCACTGCTATGTTGAGCACTGCTGCTGATGCTGAGCGCTGCTGTTGC
TGCTGCTGCTGTTGTCACTTGCGCTGCAGCGCGCCGAGCTGCTGCCGGCG
GTCATCGGCGTGGAGCGGCACATCACAAAATTTGTGTTGAGCACTGCTGC
TGCTGCTGCTGCTGTCACTTGCTGAACACTGCTGCTGCTGCTGTCACTCA
CTGAGCGCTGCTTTTGTCACACTTGCTGAGCGCCGCAGCGCGCGGAGCTG
CTGCCCGCGGTCATCGGCGTGGAGCGGCGCATCACGGAGGTGCTGCACAC
GGTGGACGGCGTCGCCGACAGGGCCGACGCCGCGGCGCGCAAGGCCGTGC
AGGCCGTCGCCGCGGAGCTCGAGGACAGCTTGCACAAGGTAAAAAATACA
TACCCCTGGATGACGCATGTCACAACGTGTATACTTCCTATGTGTGATCG
CAGTAGTTTAATACCTTGACGGTGGAAACCTGCGCAAGGCACCCGTCACC
TGCTCAAGGATTGGTCTTAAGGCCGTGCAGGCCGTCGCCGCGGAGCTCCA
GGACAGCTTGCACAAGGTAGTACCCACTGATGTATATGATATGTGTGTGT
GTACACTGTGCATGTATGAAGGTGCTCCGTTCGCCTCTTTCGACCTCGAT
AACGGTCGCTTGCCCTCATGACCTCAGCATCATTGAAATTGCTTGAAGCA
GAGTGCGCAAGGCCATGCAGGCCGTCGCTGCGGAGCTTGAGGACAGCTTG
CACAAGGTAGTAAACCTGGAAGAGCCACCTGTGCATGCTTTGTATGTATG
CTCGCAGCAGAGTCCCTAAGCTGCGAAGCTCGAAGGCTGCTCGCACAAGG
TAGTTGCCGCTTTATGTGTACATCGTGTATCGATAAAGTGTCGAAGATCA
TGCAGATTTGCTGCTGAGCTCGATGACAGCTTGCTCAAGGCACTACCGAC
GGTGCATGTATGCTGTAAAGTAAAGCTGCAAAGGCCGTGCAGGTGGTTGC
AAGTGGTTGGCAAAGCTTGAGGACCGCAGTGTTCTGACCGTGTTCGCTCC
GCCGCTCACGAAGGAACGTCAAGGATGTCGAGCATGAGTACGCGCCCGCA
GCTCGCGCGAGCTCTTGCCGTGTGCCGTTGCGACAACCTGTCCTCATCAC
AGCCCGCGCTAGCGCGACATAGTTGGTTTCATGGTGTCATCCGCATTAGA
AGCGCAAGTGCGAGCAAACACCCATCACTGGCATGCGGAATTGTAACTGA
CGCGCAGGTCAAGAAGGACATGTCGGAGCTCAGGAAGGACTTCAAGGATG
CCAAGCACAAGTACAAGGCGGACTTCAAGTCCGGGACGACCGTCGGCACA
GGCGGCGGCCATGGCAGCAGCGGCGGCAGCAGCGGCGGCAGCGGCGGCGG
CAGCAGCGACGCCATCAAGAGCAAGCGCAAGACGGAGGACTGCGACGCGA
GCGCGTCGGTTACGGAGGTGCGAAACAGTTTTCTGCGCTGTGCAGTTCTG
AGTGCTTTTTGTGTGTAAATGCTGCAATGCGCTGATATGCTGAAAGCGCG
TTGCGCATCAGACACTGAAGTGATCACTCTGAGCCGCAGGCGTGCCGTCA
ACGCCTCGATCAGCTCCCCCATATCGCCAGTGATGCGATCGGCGCACAGG
CTTGCACTCAGGCTGATGGCACTTTGCCTCCCTATTGGTTTTGGCACGTA
CTCATGGAGTTGTTTACATGAAAAACCCGCACGCATAAACTAGGCGGGCA
GCCAGCTCTTCTGTAGCCCGCGCTCGCACGTTGTTCGCGGGCCACCACGC
TATGACAGAGATGGTGAATGCGGCGCTGAGCACTGATGCCTCTAGCACGT
CCTGCTGCTGCGTGCGGCTCGCGGTCGCCAGTGCACTCTGCGTGACAGCG
GCGCTCACCACAATGAAGCACGCTGACCATTTCTTCATGCCTCAGCCAGA
AGTAAATGTATGACATCGTCCATGCCATTACGTATGGGTATGTAGCTGCA
GTCGTGCGCGAGTGCTCTTCGCATAGGCGTGTTCGCGACTGCTGACACTC
TCTTCCCTCCGGTGATCTGTCCGTGCCGCGGTGTGGTGCAGGTGCGCCTG
GACGTGCTGCAGACGGACATGGAGAACGTGAGTCTATAAATTGAACTAGT
TGAACTTCAATAGTGACACTCAAGGAGGGCAAGCCTCCTCGCTCGGAGCG
TGGAGAGTTTCGCTCGCACTGCCTGCGCCGCAATGCAGTCTTGACAGCGC
TTTGAACTTGACAACAAGTCAATGGTCAGTGATGCCACACCTCTGCTCCA
TTGCTGTGCCCTGCATTATTGAGGACAGCTGCACAAGTGTTGTCTCTGCA
CGCACAGGATGCTGCTCCGCACACTGCCTCTGAGGGGCATTGAGAAGAGC
GCCACAACACGGATGAACACCGACATGAATGTGAAGCTGTGAGCACTGAT
AACTGTCTTCGGCATACAATTTCAACTTTATAAGTGATGTTCAACAACTG
AGTACATCAATTCCGCGCTTCCCAGCTCCACCGCCTCAATTACACTCTGC
TCATGTGCTGTGTGATTCGTTCATATCCCATTCTTCTTTCCATCAGCCAT
TCATTCATTCATTCACTTAGTGCATTACGTCCAATCATTCATGCGCTGCG
TGCCTGGCAGGCCACGGGGCACCTCGCCACGCTGGATGGGCGCGTGAAGG
ACATTGAGAATGTGAGTGAGACGCGAACGGAGCACACATACTTCTAGATC
ACTGACTGACAGACACCGCCAGCAACCATTCACTCGGCTCGTAGGCCACG
ATGGCAGCGCTCCACAAACAGACTCTTGCAGGCCGGTGCCGTGCACCAAC
TTGATACTTAAGCTTTGGCTGCAGGGCACAGAATGACAGAGCCTGGTTCG
CAATCCTCTGCACACACACACAAACGTGGTCACGTCTCTGAGAGCCTGCC
GCGTGGACACGACGCGTGCGGGAGTCAAAAGAAAGGCAGCAGCGCTCAAC
AGCAGCGCGTGACGGGGCGAATGCAACTTCTGCCGCCCCCCGGGGAGAAG
GCGCTCACGAGCTGCGCCGGCCGCAAGGCATCGGGCATGCTCAGCGTGAA
GACTGAGCGGTGCGCCGGTGCGAGTGCGGAGGGCACGCCGCAGCAGCAGC
CGGCCTTCGGCTTGCTTACCTGGCTTGCTTGTTTGCCCGGCTTGCTTGCT
TGCCCGGCTTGCTTGCTTGCCCGGCTTGCTTGCTTGCCCGGCAAGGGACC
ATGATGGTGTTGTCACTTTACATTTACGCCCCTCTAGGTTGGAGGCTGAC
GCCTTTTGAGGTTGGAGGTTGCATCAGGGACAGACGGCATTGCTTGTGAC
CCAACCAGCGTGTGCCGTCTCGCCGCAGCCGTGGGGTAGGTACGAATTAC
AAATGTGGCAGTGCTCAGCAGGTAGTGACGCATCCGGTAGGTCTCCGTGT
TCCGAAGCTTCCACGGGCAACGGATCGTACACTTGCGGCGATGATGCTGG
CAACCGCTGCTGCGGACGGGCTCAGAAACGCTGCAGGATAGCAATCTCGC
GCGGCGCTGCATTGAGACAGTGATTGAAGCTGCGACCTGTTTCATGACAA
ATTTTGATGACTGAGTCTGTTCACGCATGCGGTGCCCCCCCCCCCCCCCC
CCCCCTCAGCACCTCCTTGGCGATGGCCAGCGCCACAGCACCACCAGCGA
CGTCATGGCGCGCCTCGTGGACGAGTTTGAGCAATGGAAGAGGGACTCCC
TGTCGTTCTTCGACTGGTGACGCCCCCCGCTGCTCGCCAGCTGCGCGCAA
CGGCACGCTCTGATAGCGTGCGCAGGCAGTTCAGACGGTGCGCTGTGAGC
AGATATCTGGCTGCAGCTGTTTGGGTTGTCCTACTGTAGGGCGACGAACT
GCTAGCTGGGTCGACAAGAAAGAATGTAGGGGTTGC

Coding sequence (CDS) from alignment at Contig_5:489582..501467-

>mRNA_2293 ID=mRNA_2293|Name=jgi.p|Trimin1|72195|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1710bp|location=Sequence derived from alignment at Contig_5:489582..501467- (Tribonema minus UTEX_B_3156 )
ATGAGAGTGCGCGACGATGATGTCTTCGTGACAGCTGAGGCCACGGATGC
GCTGGGAGACAGCACTGAAGACTGGGCCCTGCTGGAGCAGATGCGCCCAG
AGGAGGAGGCTGATGGCGCACCCGACGCATCCAGCCCTGCTGCTGGCGAC
TCTACCTCTCCCCAGCTCTCGGAAATCCGCCAAGCCGATGCACCAAAGTC
CACAGAGGAAGCGGCTTATGCTCCGACCGTGGCGCCTGCCTCCACGGTGT
CGTCGCCAGCCACTGATGGTGTCGCGGACTCCGGCGCTGACACGGAGGGG
AACCAGACCGGTCCTCCGCTGCGCGAACGCGTCGCCGCTGCCGCCTCCGC
AGCACGGCGCAGCATCAGCGCGCACGCCGTGCTGCGGTTCATCTTCATGA
CGGCCCTACATGTGCTGATGACGGTCTCAACGCTCTGGGTGCTCGGAGTC
CCCATGGGAGTCGGTAGGGGCCCCATGCACGGCGGCGGCAGGGCCTTGGG
TGGCGGCGGCGGCGGCAGCGGTGGCAACGGCGGCGGCGGCAACGGCGGCT
TCAGGCGGCAGAAGCGCCTCTGCGCGATCGAGAAGCGGCTGGCAGAGCAG
GCGGATATCATTGAGAACCTTGAGACCATAGCCGTCAACTTTGACGAGCA
GCTGACCAGTCTGCAGTCTGGGGAGAAGGACCTCAAGGACCAGGTCGCGA
CCATGCGCAAGAACTTCAACTTGCAGTTGACCAACCTGCGCTCCAGGGTA
GACGTGAAGGAGGACCTCAAGAACCGGATCGCGGACATGGGCACGAACTT
CAATTCGCAGCTGACCGAGCTGCACGCCAGGGTGGTCTCCAACGAGGAGC
ATGATGACGCATCGTTCCAGGACATCTTCGCCTCGCTGAACTGCATCCCC
TCCTTCGATGACGTGAGCGCCATGCTGGACGCACACGCGAGCGCTGAGGA
CACCAAGGCGATGGACCCCCTGCTCTTCATGCAGCAGGTGGAGCCGCGCA
TGGCGGCCAAGGCGGCGCAGGTGGCGGAGGCGGTGGTCAGGGACCGCGCC
GTCGCATGGCGCAATGAGGCAAAGAGCCACCTGGATGCGATGAAGACGGA
ACTGCTGGGCGAAGCGCTGCCGCAGGCTACGGAGGCAGCCACCCTCGCCG
TGCGCGCGGAGCTGCTGCCCGCGGTCATCGGCGTGGAGCGGCGCATCACG
GAGGTGCTGCACACGGTGGACGGCGTCGCCGACAGGGCCGACGCCGCGGC
GCGCAAGGCCGTGCAGGCCGTCGCCGCGGAGCTCGAGGACAGCTTGCACA
AGGTCAAGAAGGACATGTCGGAGCTCAGGAAGGACTTCAAGGATGCCAAG
CACAAGTACAAGGCGGACTTCAAGTCCGGGACGACCGTCGGCACAGGCGG
CGGCCATGGCAGCAGCGGCGGCAGCAGCGGCGGCAGCGGCGGCGGCAGCA
GCGACGCCATCAAGAGCAAGCGCAAGACGGAGGACTGCGACGCGAGCGCG
TCGGTTACGGAGGTGCGCCTGGACGTGCTGCAGACGGACATGGAGAACGC
CACGGGGCACCTCGCCACGCTGGATGGGCGCGTGAAGGACATTGAGAATC
ACCTCCTTGGCGATGGCCAGCGCCACAGCACCACCAGCGACGTCATGGCG
CGCCTCGTGGACGAGTTTGAGCAATGGAAGAGGGACTCCCTGTCGTTCTT
CGACTGGTGA