mRNA_2165 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|79600
Unique NamemRNA_2165
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|79600 vs. uniprot
Match: A0A835YXX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX9_9STRA)

HSP 1 Score: 596 bits (1537), Expect = 4.100e-213
Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 1
Query:   16 MRATLIRQGLSVARRASGSPGAGACAFTSQARAGGRACIRAHGSCSAVAPWGARLMSSSIPTMTGMPDPFPYEEGRYNSATVNAGKVYAEDTADFATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTNADGHVLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHDAHAGGAGALHFLCHLTAAXXXXXXXXXXXXXXXXXXXXAQWVPVSALREQGEAGDVVAAAVAQLLEGGAERSEMAAEVHASAVPGRPPYTLFYHRD 1041
            MRATLIRQGLSVARRASGSPGAGACAFTSQARAGGRACIRAHGSCSAVAPWGARLMSSSIPTMTGMPDPFPYEEGRYNSATVNAGKVYAEDTADFATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTNADGHVLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHDAHAGGAGALHFLCHLTAAXXXXXXXXXXXXXXXXXXXXAQWVPVSALREQGEAGDVVAAAVAQLLEGGAERSEMAAEVHASAVPGRPPYTLFYHRD
Sbjct:    1 MRATLIRQGLSVARRASGSPGAGACAFTSQARAGGRACIRAHGSCSAVAPWGARLMSSSIPTMTGMPDPFPYEEGRYNSATVNAGKVYAEDTADFATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTNADGHVLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHDAHAGGAGALHFLCHLTAAXXXXXXXXXXXXXXXXXXXXAQWVPVSALREQGEAGDVVAAAVAQLLEGGAERSEMAAEVHASAVPGRPPYTLFYHRD 342          
BLAST of jgi.p|Trimin1|79600 vs. uniprot
Match: A0A836C878_9STRA (Nucleoside diphosphate linked moiety X-type motif 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C878_9STRA)

HSP 1 Score: 198 bits (504), Expect = 5.740e-57
Identity = 130/290 (44.83%), Postives = 175/290 (60.34%), Query Frame = 1
Query:  181 MSSSIPTMTGMPDPFPYEEGRYNSATVNAGKVYAEDTADFATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHY-GFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTNADGHVLVVR-RPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHDAHAGGAGALHFLCHLT---AAXXXXXXXXXXXXXXXXXXXXAQWVPVSALREQGEAGDVVAAAVAQLLEGGAERSEMAAEVHASAVPGRPPYTLFYH 1035
            +S S+P++ G+PD FPY+EG+YNSA++NAGKV A+DTADFA  L AT+ HL+ E+K+A+WL+VPMD+AHY+P+A    GF+ HH   +AV+MV WL   V +++PPFATHHV V+  V +A G VLVV+ R P          + + FPGGLAE GEDL  AAAR V         G   AF G+LA RQ H    G +  L+F+C +T     XXXXXXXX            A+W+P+     Q      +   VA++L  G +  E+  E   S    RPPY ++YH
Sbjct:   51 VSGSLPSVEGLPDLFPYKEGQYNSASINAGKVRAQDTADFAAKLSATVAHLQREEKSAVWLKVPMDYAHYLPVAARAAGFRPHHALPDAVLMVRWLLDGVPDKVPPFATHHVGVAGCVLDARGRVLVVKERHPR---------ALWKFPGGLAEAGEDLGAAAAREVEEET-----GVRSAFAGLLAFRQQHAMQFGNSD-LYFICRMTRRTGEXXXXXXXXQELRPCAHEIAEARWMPLEEFAAQNT--HPMMGVVAKMLMEGPQNHELKEETQESIFGSRPPYKMYYH 323          
BLAST of jgi.p|Trimin1|79600 vs. uniprot
Match: D8LBP8_ECTSI (Nudix (Nucleoside diphosphate linked moiety X)-type motif 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP8_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 8.940e-49
Identity = 114/298 (38.26%), Postives = 163/298 (54.70%), Query Frame = 1
Query:  151 SAVAPWGARLMSSSIPTMT--GMPDPFPYEEGRYNSATVNAGKVYAEDTADFATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTNADGHVLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHDAHAGGAGALHFLCHLTAAXXXXXXXXXXXXXXXXXXXXAQWVPVSALREQGEAGDVVAAAVAQLLEGGAERSEMAAEVHASAVPGRPPYTLFYHR 1038
            S+++  G+   SSS  T++  G+P P P+E+ ++NSATV+  K+  EDTADFA  LFAT+  LR + K ALWL+VP DF H++ IA HYGF+ HHT+   +MM LWL  DV +++PP+ THHV V+  V N+   VL+V+             + + FPGGLA+ GE + +AA R V         G    FR VL++R  H+   G +  L+F+C L                       A W+P+   ++Q      + A VA +LE   E  E+   +H SA+P R PY L YHR
Sbjct:   57 SSISAAGSCRWSSSSTTISNVGLPVPLPFEQSKFNSATVDIAKIQVEDTADFALKLFATVDKLRKDGKAALWLKVPTDFCHFISIASHYGFQLHHTQPKYLMMYLWLPEDVPDKVPPYGTHHVGVAGCVMNSQDEVLLVK--------DKHKGAMWKFPGGLADVGEGIGEAAVREVWEET-----GVMTEFRSVLSMRHQHEMQFGNSD-LYFICRLMLPEDTGALDINKCNHEIAD---ACWMPLDQFKKQTRHS--MLAVVADMLEK-PEEKELTRSLHESAIPDRAPYFL-YHR 333          
BLAST of jgi.p|Trimin1|79600 vs. uniprot
Match: A0A0D2WP75_CAPO3 (NUDIX domain-containing protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WP75_CAPO3)

HSP 1 Score: 94.4 bits (233), Expect = 2.020e-17
Identity = 59/151 (39.07%), Postives = 74/151 (49.01%), Query Frame = 1
Query:  235 EGRYNSATVN----AGKVYAEDTADFATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTNADGHVLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAV 675
            E RY   T++    A      D A F T L  ++T  R E K  +WLR+ +  AHY+PIA   GF FHH E   VMM  WL  D  +++P +ATH+V V   V N    +LVV                +  PGG A RGEDL  AA R V
Sbjct:    9 EDRYKGVTIDTEFAAELANNADQARFKTLLTDSLTAWRREGKRGIWLRIALKDAHYIPIAAEEGFVFHHAEPLHVMMTRWLPEDEPSQLPTYATHYVGVGGFVLNDQNELLVVSE-------RYGDKPMWKLPGGHANRGEDLGQAAIREV 152          
BLAST of jgi.p|Trimin1|79600 vs. uniprot
Match: UPI001E1DCC90 (nucleoside diphosphate-linked moiety X motif 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCC90)

HSP 1 Score: 91.7 bits (226), Expect = 2.770e-17
Identity = 79/270 (29.26%), Postives = 120/270 (44.44%), Query Frame = 1
Query:  241 RYNSATVNAGKVYAEDTA--DFATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTNADGHVLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHD-AHAGGAGALHFLCHLTAAXXXXXXXXXXXXXXXXXXXXAQWVPVSALREQGEAGDV---VAAAVAQLLEGGAERSEMAAEVHASAVPGRPPYTLFY 1032
            RYN  TV+     +   +  DF   L  +I   R E++ A+WL++P+D++ Y+  A   GF+FH+ E +  ++ LWLR D  +  P FATH + V  VV   D   ++V +              + FPGGLA+ GED+ DAA R           G    F  V+A RQ H+   A G   L+ +C L                        QW+P+ ALRE  +   +   + + +   L+ G    +  AE   S   G   +TLF+
Sbjct:   36 RYNGVTVSVKDNISPTMSVQDFQNLLKESIVKWRSEERTAIWLQMPIDYSRYIEAASAEGFQFHNAENSQCLLKLWLR-DGVDASPRFATHQLGVCGVVIKQDTREVLVMQE-----RKSQFSKFWKFPGGLADLGEDIGDAAVRETFEET-----GINSEFASVIAFRQQHEHPSAFGRSDLYVICRLRPLTFDIVPCDREVLK-------CQWMPIDALREHAQITSITHRLTSVIIHGLDNGFNSIDYTAEQMKSVYKGLH-FTLFH 286          
BLAST of jgi.p|Trimin1|79600 vs. uniprot
Match: UPI001458116F (nucleoside diphosphate-linked moiety X motif 6-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458116F)

HSP 1 Score: 89.0 bits (219), Expect = 2.540e-16
Identity = 58/176 (32.95%), Postives = 92/176 (52.27%), Query Frame = 1
Query:  232 EEGRYNSATVNAGKVYAE-DTADFATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTNADGH-VLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHD 753
            E  R+N  TV+  +V       +F + L  ++   R ++ NA WL++P+ +  ++PIA   GF+FHH EEN  ++ LW++ +  ++ P FATH V V+  V   D   VLVV+             S + F GGL++ GED+ D A R V         G    F+ V+++RQ H+
Sbjct:   34 ETDRFNGITVDVKQVSVSLPDEEFHSLLHNSLQVWRSKEINAAWLKIPIQYGRFIPIAAKLGFQFHHAEENNCLLKLWMKENGEDKTPRFATHQVGVAGFVFREDTQSVLVVK-------DRKSKFSYWKFAGGLSDLGEDIGDTAVREVFEET-----GVKTEFQSVMSVRQQHN 197          
BLAST of jgi.p|Trimin1|79600 vs. uniprot
Match: A0A210PNL3_MIZYE (Nucleoside diphosphate-linked moiety X motif 6 n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PNL3_MIZYE)

HSP 1 Score: 87.0 bits (214), Expect = 1.270e-15
Identity = 63/197 (31.98%), Postives = 102/197 (51.78%), Query Frame = 1
Query:  172 ARLMSSSIPTMTGMPDPFPYEEGRYNSATVNAGKVYAEDTAD--FATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTNADGH-VLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHD 753
            ARL++S    +TG       E  R+N  TV+  +V +E   D  F   L  ++   + E+ +A WL++P+ +  ++P+A  +GF+FHH E+N+ ++ LW++    ++ P FATH V V+  V   D   VLVV+             S + F GGL++ GED+ D A R V         G    F+ V+ +RQ H+
Sbjct:   24 ARLLTS----LTG-------ETDRFNGVTVDVEQV-SESLHDKEFHNLLKNSLQKWKAEEISAAWLKIPIQYGRFIPVAAKFGFQFHHAEQNSCLLKLWMKEGGEDKTPRFATHQVGVAGFVFREDTQSVLVVK-------DRKSKFSYWKFAGGLSDLGEDIGDTAVREVFEET-----GVRTKFQSVMTVRQQHN 196          
BLAST of jgi.p|Trimin1|79600 vs. uniprot
Match: A0A814F0U8_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814F0U8_ADIRI)

HSP 1 Score: 86.7 bits (213), Expect = 1.410e-15
Identity = 63/196 (32.14%), Postives = 97/196 (49.49%), Query Frame = 1
Query:  226 PYEEGRYNSATVNAGKVYAEDTADFATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVS-AVVTNADGHVLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHDAHAGGAGA--LHFLCHLTA 804
            PYE  R+N+A V     + +D      SL  ++   R + + ++WL +P++ AH +PIA   GF +H+ EE   ++  WL     + IP FATH V V  AV+      +L+++               +  PGG  E  ED+AD A R V         G    F  ++ALRQ+H+ H GG G   ++F+C L+A
Sbjct:   25 PYEIDRFNAARVRISD-WPDDIKIIKASLSKSLEQWRKDNRTSVWLWIPIEKAHVIPIAAELGFTYHNAEERIAVLNQWLL-PTKSMIPRFATHQVGVGGAVLREKTNELLIIKE-------RIRNLEFWKLPGGAVELSEDIADGAMREVFEET-----GIRSKFESIIALRQSHN-HPGGHGRSDIYFVCRLSA 205          
BLAST of jgi.p|Trimin1|79600 vs. uniprot
Match: A0A3M1FGN3_9CHLR (NUDIX domain-containing protein (Fragment) n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1FGN3_9CHLR)

HSP 1 Score: 84.3 bits (207), Expect = 2.090e-15
Identity = 62/192 (32.29%), Postives = 90/192 (46.88%), Query Frame = 1
Query:  229 YEEGRYNSATVNAGKVYAEDTADFATSLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTNADGHVLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHDAHAGGAGALHFLCHLTA 804
            +E  R+N   + A     ED   FA  L A +       +  +WLRVP++ A  +P+A   GF+FHH++E+ VM+V  LR D    +P +ATH++    VV N+ G +LVV                +  PGG    GE L DA  R V     R   G    F  ++  R  H  +  G   ++F+C LTA
Sbjct:    4 HEVNRFNGIEIEAAHA-PEDPECFAGELAAALAAWEEAGRELVWLRVPIERAALIPVATAAGFRFHHSQEDYVMLVRRLRPDAL--VPHYATHYIGAGGVVLNSRGELLVVSE-----RHRRSARPYYKLPGGALHPGEHLVDAVIREV-----REETGVHARFEALVCFRHWHG-YRYGKSDIYFICRLTA 181          
BLAST of jgi.p|Trimin1|79600 vs. uniprot
Match: A0A7K6AQ84_UPUEP (Nucleoside diphosphate-linked moiety X motif 6 (Fragment) n=1 Tax=Upupa epops TaxID=57439 RepID=A0A7K6AQ84_UPUEP)

HSP 1 Score: 83.6 bits (205), Expect = 8.130e-15
Identity = 59/167 (35.33%), Postives = 86/167 (51.50%), Query Frame = 1
Query:  307 SLFATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWLRGDVANRIPPFATHHVDVSAVVTN-ADGHVLVVRRPPXXXXXXXXXXSSFTFPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHDAHAGGAGA--LHFLCHL 798
            SL   +   R E + A+WL VP+D +    +A   GF FHH E++A  + LWL G+  +R+P FATH + V+  V N + G VLVV+             + + FPGGL+  GED+ D A R V         G    F+ +L++RQ H  H G  G   ++ +C L
Sbjct:    1 SLAGAVARWREEGRVAVWLHVPIDQSRLAAVAAAQGFAFHHAEQDASTLTLWL-GEGPSRLPGFATHQLGVAGAVLNESTGEVLVVQ-------DRNKSINMWKFPGGLSNPGEDIGDTAVREVFEET-----GIKSEFKSILSIRQQHK-HPGAFGKSDMYIICRL 153          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|79600 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXX9_9STRA4.100e-213100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C878_9STRA5.740e-5744.83Nucleoside diphosphate linked moiety X-type motif ... [more]
D8LBP8_ECTSI8.940e-4938.26Nudix (Nucleoside diphosphate linked moiety X)-typ... [more]
A0A0D2WP75_CAPO32.020e-1739.07NUDIX domain-containing protein n=2 Tax=Capsaspora... [more]
UPI001E1DCC902.770e-1729.26nucleoside diphosphate-linked moiety X motif 6-lik... [more]
UPI001458116F2.540e-1632.95nucleoside diphosphate-linked moiety X motif 6-lik... [more]
A0A210PNL3_MIZYE1.270e-1531.98Nucleoside diphosphate-linked moiety X motif 6 n=2... [more]
A0A814F0U8_ADIRI1.410e-1532.14Hypothetical protein n=2 Tax=Adineta ricciae TaxID... [more]
A0A3M1FGN3_9CHLR2.090e-1532.29NUDIX domain-containing protein (Fragment) n=1 Tax... [more]
A0A7K6AQ84_UPUEP8.130e-1535.33Nucleoside diphosphate-linked moiety X motif 6 (Fr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_6contigContig_6:1012077..1014502 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|79600|CE79599_147
GOsGO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0008083,GO:0008150,GO:0009966,GO:0010469,GO:0010646,GO:0023051,GO:0030545,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0048018,GO:0048583,GO:0050789,GO:0050794,GO:0065007,GO:0065009,GO:0098772
Preferred nameNUDT6
Description8-hydroxy-dADP phosphatase activity
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0648@1|root,KOG0648@2759|Eukaryota
Evalue2.06e-50
Seed ortholog2880.D8LBP8
Hectar predicted targeting categorymitochondrion
TranscriptId79922
TrackFilteredModels1
ProteinId79600
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|79600gene_2165Tribonema minus UTEX_B_3156 geneContig_6 1012077..1014502 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|79600Trimin1|79600|CE79599_147Tribonema minus UTEX_B_3156 polypeptideContig_6 1012092..1014375 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2165_1exon_2165_1Tribonema minus UTEX_B_3156 exonContig_6 1012077..1012344 +
exon_2165_2exon_2165_2Tribonema minus UTEX_B_3156 exonContig_6 1013145..1013311 +
exon_2165_3exon_2165_3Tribonema minus UTEX_B_3156 exonContig_6 1013767..1014502 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_2165UTR5_2165Tribonema minus UTEX_B_3156 five_prime_UTRContig_6 1012077..1012091 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2165CDS_2165Tribonema minus UTEX_B_3156 CDSContig_6 1012092..1012344 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_2165UTR3_2165Tribonema minus UTEX_B_3156 three_prime_UTRContig_6 1014376..1014502 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2165 ID=mRNA_2165|Name=jgi.p|Trimin1|79600|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1171bp|location=Sequence derived from alignment at Contig_6:1012077..1014502+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTACTCACCACGAGGATGAGGGCAACGTTGATCAGACAAGGGCTCAGCGT
CGCAAGACGCGCATCCGGTTCACCAGGCGCAGGTGCCTGTGCGTTTACTA
GCCAAGCACGGGCAGGGGGAAGGGCCTGCATCAGGGCACACGGATCATGT
TCTGCGGTGGCACCATGGGGAGCCAGGCTTATGAGCAGCAGCATACCGAC
AATGACAGGCATGCCGGACCCATTTCCATACGAGGAGGGCCGCTACAACA
GCGCCACCGTAAATGCAGGCAAGGTGTATGCTGAGGACACGGCAGATTTT
GCCACTTCCCTCTTTGCCACCATCACGCACCTGCGGCATGAGAAGAAGAA
TGCGCTTTGGCTCAGGGTGCCCATGGACTTTGCGCACTACGTGCCTATCG
CTGGGCACTATGGCTTCAAGTTCCACCATACCGAGGAGAACGCCGTCATG
ATGGTTCTGTGGCTGCGCGGCGACGTCGCCAACCGCATCCCGCCGTTCGC
GACGCACCACGTCGACGTCTCCGCCGTCGTCACCAACGCCGACGGCCACG
TCCTCGTCGTGCGCCGCCCCCCCCCCGCCCCCCCCTCCCCCACCCCCCCC
CCCTCCTCCTTCACCTTCCCCGGGGGGCTCGCAGAGCGCGGCGAGGACCT
CGCGGACGCCGCCGCACGCGCCGTCGCCGCCGCCGCGCCGCGCGCCCTCG
GCGGCGGCGGCGTCGCGTTCCGCGGCGTCCTCGCGCTGCGTCAGGCGCAC
GACGCGCACGCGGGCGGCGCCGGCGCGCTGCACTTCCTGTGCCACCTGAC
GGCGGCCGCCGGAGGCGGCGGCGGCGGCGGCGGCGGTAGCGGCGGCGGCG
AGGACGGCGGCGGCGGCGCGCAGTGGGTGCCCGTGTCGGCGCTCAGGGAG
CAGGGGGAGGCGGGGGATGTGGTGGCGGCGGCGGTGGCACAGCTGCTCGA
GGGGGGGGCGGAGCGCAGCGAGATGGCGGCGGAGGTGCACGCGTCGGCCG
TGCCGGGGCGCCCGCCGTACACGCTGTTCTACCACAGGGATTGAGGGGGG
GGGGGGGGGGGATGGGCCGCGCCCCCACGCGGAGTTTCGACGTCGTTGAG
CGGAGTGCGTAGCGGCAGCAGACGCGCATGTAGGCGTTACACGTCTCAGT
ATATATATGAAAGGATGATGT
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protein sequence of jgi.p|Trimin1|79600

>Trimin1|79600|CE79599_147 ID=Trimin1|79600|CE79599_147|Name=jgi.p|Trimin1|79600|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=343bp
MRATLIRQGLSVARRASGSPGAGACAFTSQARAGGRACIRAHGSCSAVAP
WGARLMSSSIPTMTGMPDPFPYEEGRYNSATVNAGKVYAEDTADFATSLF
ATITHLRHEKKNALWLRVPMDFAHYVPIAGHYGFKFHHTEENAVMMVLWL
RGDVANRIPPFATHHVDVSAVVTNADGHVLVVRRPPPAPPSPTPPPSSFT
FPGGLAERGEDLADAAARAVAAAAPRALGGGGVAFRGVLALRQAHDAHAG
GAGALHFLCHLTAAAGGGGGGGGGSGGGEDGGGGAQWVPVSALREQGEAG
DVVAAAVAQLLEGGAERSEMAAEVHASAVPGRPPYTLFYHRD*
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mRNA from alignment at Contig_6:1012077..1014502+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2165 ID=mRNA_2165|Name=jgi.p|Trimin1|79600|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2426bp|location=Sequence derived from alignment at Contig_6:1012077..1014502+ (Tribonema minus UTEX_B_3156 )
GTACTCACCACGAGGATGAGGGCAACGTTGATCAGACAAGGGCTCAGCGT CGCAAGACGCGCATCCGGTTCACCAGGCGCAGGTGCCTGTGCGTTTACTA GCCAAGCACGGGCAGGGGGAAGGGCCTGCATCAGGGCACACGGATCATGT TCTGCGGTGGCACCATGGGGAGCCAGGCTTATGAGCAGCAGCATACCGAC AATGACAGGCATGCCGGACCCATTTCCATACGAGGAGGGCCGCTACAACA GCGCCACCGTAAATGCAGGTGAGGAACACAAACTTCAACACTGCCGTGAC GTAAGGTTTTTGCGCCATGTGCATGTAATGTGAGTTACACAATGATCCTC TGACTTGCAGCTCCGATGACGTACTCGCCGTTCTATAGTCACGCCTGGCG TGCTTGTGGACCGTACCGCAAAGCTCATGTTGCATCCGCGCTACTTGGCA CACTCAATGCCGAAAATGCCTGCTTGTGCGAGATAAGTTGCTCCCCGAGC TGGGCAGTAGCGGCATGCCATGCGTGAGCTGCGTCTCAAGCGGAGCTCAT TGCAGCATGCCAGTTTCTTGTGTTAGAGATCGCGTCAAACCCATCGTCCA TGCCAGTTGCAACCTCATTCAGACACCTGAGGCACTGGCCCCTTCAGCAG ATGCAGGATGAGTTTTGTAGTTAAAGCATTATTTACCTCAGATTCCATTC ATGAATTTAGCGTGCCAAAAATCACTCACATCTTGCAGAGTGCACGCAAG CCGCTGTTGCGCTGGTGAGAGCAAGGTCTCTTGTTGCAAGTGCGGCACTG TTCACGACACACTTCGGCATGCATCAAGGGCTACGCACACGGTGGTCCTG CAAATGGCTGCTGCCGCCTGGGTGCTAAGCCAAGCGCACCTGATGCTTCC AGAGAAAACACTGAAGAAATCCGCAGTATGCGACTGAAGATGGTAACCAG ACCGTGCGAATCAGGTCGAGATGTATATGTATGCACGGTGTGTCCCTCCG CAGTACCAGTTTTTTTGGCTCTTCTTCAGGCTGAAAGTAGATATCTCTCC TCCCGCTTCTCTGTGCAGGCAAGGTGTATGCTGAGGACACGGCAGATTTT GCCACTTCCCTCTTTGCCACCATCACGCACCTGCGGCATGAGAAGAAGAA TGCGCTTTGGCTCAGGGTGCCCATGGACTTTGCGCACTACGTGCCTATCG CTGGGCACTATGGCTTCAAGTTCCACCATACCGAGGTGAGATATCGCTGC GCTCGTGGGTGACGCGCATTGCGCTGATTCCCAAATATATTGCTGCATGC CAACAGGCACATGGCTGCACGCTGCAATGCTGCATGATACTCCGGTGATG CAAGACACAGGTGAGGATGCGTATGCGCCATGATTTTTGCTTTTGAGTGG TGGGCGAATATTTGGTGCAACAAGAGCATGTTGTTCCTTTCAGCCTGCAC GGTGTGCGAGGTCGCTGGCATTGCGGCAGTTGGCGCTGGCTGGCTTGCGG AGTGGGCACTTCAGGCCACAGAGTGGTAGGCCGCATGTCGAATGGGGCGC TGCACTGAAAGAACGAGTTGCGCGCATGGGCCCAGCCTATGAGGCGGGCC CCCCTGCACCCCCCCAACACAAGCCCTCACCCCCCCCCCTCCACCCTCTC TGCCCACACCCGCTCGTGTCCCTCCCCCTCTCCCCTGCAGGAGAACGCCG TCATGATGGTTCTGTGGCTGCGCGGCGACGTCGCCAACCGCATCCCGCCG TTCGCGACGCACCACGTCGACGTCTCCGCCGTCGTCACCAACGCCGACGG CCACGTCCTCGTCGTGCGCCGCCCCCCCCCCGCCCCCCCCTCCCCCACCC CCCCCCCCTCCTCCTTCACCTTCCCCGGGGGGCTCGCAGAGCGCGGCGAG GACCTCGCGGACGCCGCCGCACGCGCCGTCGCCGCCGCCGCGCCGCGCGC CCTCGGCGGCGGCGGCGTCGCGTTCCGCGGCGTCCTCGCGCTGCGTCAGG CGCACGACGCGCACGCGGGCGGCGCCGGCGCGCTGCACTTCCTGTGCCAC CTGACGGCGGCCGCCGGAGGCGGCGGCGGCGGCGGCGGCGGTAGCGGCGG CGGCGAGGACGGCGGCGGCGGCGCGCAGTGGGTGCCCGTGTCGGCGCTCA GGGAGCAGGGGGAGGCGGGGGATGTGGTGGCGGCGGCGGTGGCACAGCTG CTCGAGGGGGGGGCGGAGCGCAGCGAGATGGCGGCGGAGGTGCACGCGTC GGCCGTGCCGGGGCGCCCGCCGTACACGCTGTTCTACCACAGGGATTGAG GGGGGGGGGGGGGGGGATGGGCCGCGCCCCCACGCGGAGTTTCGACGTCG TTGAGCGGAGTGCGTAGCGGCAGCAGACGCGCATGTAGGCGTTACACGTC TCAGTATATATATGAAAGGATGATGT
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Coding sequence (CDS) from alignment at Contig_6:1012077..1014502+

>mRNA_2165 ID=mRNA_2165|Name=jgi.p|Trimin1|79600|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1029bp|location=Sequence derived from alignment at Contig_6:1012077..1014502+ (Tribonema minus UTEX_B_3156 )
ATGAGGGCAACGTTGATCAGACAAGGGCTCAGCGTCGCAAGACGCGCATC
CGGTTCACCAGGCGCAGGTGCCTGTGCGTTTACTAGCCAAGCACGGGCAG
GGGGAAGGGCCTGCATCAGGGCACACGGATCATGTTCTGCGGTGGCACCA
TGGGGAGCCAGGCTTATGAGCAGCAGCATACCGACAATGACAGGCATGCC
GGACCCATTTCCATACGAGGAGGGCCGCTACAACAGCGCCACCGTAAATG
CAGGCAAGGTGTATGCTGAGGACACGGCAGATTTTGCCACTTCCCTCTTT
GCCACCATCACGCACCTGCGGCATGAGAAGAAGAATGCGCTTTGGCTCAG
GGTGCCCATGGACTTTGCGCACTACGTGCCTATCGCTGGGCACTATGGCT
TCAAGTTCCACCATACCGAGGAGAACGCCGTCATGATGGTTCTGTGGCTG
CGCGGCGACGTCGCCAACCGCATCCCGCCGTTCGCGACGCACCACGTCGA
CGTCTCCGCCGTCGTCACCAACGCCGACGGCCACGTCCTCGTCGTGCGCC
GCCCCCCCCCCGCCCCCCCCTCCCCCACCCCCCCCCCCTCCTCCTTCACC
TTCCCCGGGGGGCTCGCAGAGCGCGGCGAGGACCTCGCGGACGCCGCCGC
ACGCGCCGTCGCCGCCGCCGCGCCGCGCGCCCTCGGCGGCGGCGGCGTCG
CGTTCCGCGGCGTCCTCGCGCTGCGTCAGGCGCACGACGCGCACGCGGGC
GGCGCCGGCGCGCTGCACTTCCTGTGCCACCTGACGGCGGCCGCCGGAGG
CGGCGGCGGCGGCGGCGGCGGTAGCGGCGGCGGCGAGGACGGCGGCGGCG
GCGCGCAGTGGGTGCCCGTGTCGGCGCTCAGGGAGCAGGGGGAGGCGGGG
GATGTGGTGGCGGCGGCGGTGGCACAGCTGCTCGAGGGGGGGGCGGAGCG
CAGCGAGATGGCGGCGGAGGTGCACGCGTCGGCCGTGCCGGGGCGCCCGC
CGTACACGCTGTTCTACCACAGGGATTGA
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