mRNA_2145 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|154875 vs. uniprot
Match: A0A835YNB8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB8_9STRA) HSP 1 Score: 632 bits (1631), Expect = 7.240e-229 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 1 Query: 1 LRIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQTRWVEESSEQAIGSLLIALNVLMLVMAVAQVALVYTK 972 LRIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQTRWVEESSEQAIGSLLIALNVLMLVMAVAQVALVYTK Sbjct: 1 LRIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQTRWVEESSEQAIGSLLIALNVLMLVMAVAQVALVYTK 324
BLAST of jgi.p|Trimin1|154875 vs. uniprot
Match: A0A836CDQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDQ4_9STRA) HSP 1 Score: 556 bits (1434), Expect = 3.100e-190 Identity = 277/306 (90.52%), Postives = 292/306 (95.42%), Query Frame = 1 Query: 1 LRIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQTRWVEESSEQAIGSLLIAL 918 LRIP++VLQVLTQYISITG+ALPLQYL FLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVI ALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACD+ L++FTGN YLHADYSL+C+DDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWR AARQREHGQQPSRL ASSFLWSSY+GRAYYWES ECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTM+YEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQ+RWVE E++ L+IA+ Sbjct: 583 LRIPIVVLQVLTQYISITGLALPLQYLQFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVIIALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDENLQKFTGNTYLHADYSLRCNDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRSAARQREHGQQPSRLAPASSFLWSSYKGRAYYWESVECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMMYEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQSRWVEPLGERSSCRLVIAM 888
BLAST of jgi.p|Trimin1|154875 vs. uniprot
Match: A0A836CGF3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF3_9STRA) HSP 1 Score: 538 bits (1387), Expect = 7.460e-190 Identity = 274/311 (88.10%), Postives = 288/311 (92.60%), Query Frame = 1 Query: 40 YISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQTRWVEESSEQAIGSLLIALNVLMLVMAVAQVALVYTK 972 YISITG+ LPLQYL FLRAVDFMSLDMRWLTSPGCAAD+DFYGRLLIATLAPLVITALIFSPRLYL FISRRRPAVAPKLRQ+V RDVNAFLVFTFLIFSGVSLTVFETFACDK LKEFTG+IYLHADYSL+C+DDEGLHKKYSIYAGFMVVVYPVGIPLMYAAIL A +QREHG+QPSRL ASSFLWSSY+GRA YWES EC RRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYE++RPHH+ MD WLYTLGCVIVV SMFTSLLMQ V+ SEQAIGSLLIALNVLMLVMA+AQVALVYT Sbjct: 91 YISITGLTLPLQYLQFLRAVDFMSLDMRWLTSPGCAADVDFYGRLLIATLAPLVITALIFSPRLYLRFISRRRPAVAPKLRQVVARDVNAFLVFTFLIFSGVSLTVFETFACDKHLKEFTGDIYLHADYSLRCNDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILRLAAVKQREHGRQPSRLAPASSFLWSSYKGRACYWESVECFRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEQVRPHHNRMDKWLYTLGCVIVVSSMFTSLLMQYHPVDGGSEQAIGSLLIALNVLMLVMAIAQVALVYTN 401
BLAST of jgi.p|Trimin1|154875 vs. uniprot
Match: A0A835YTX2_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTX2_9STRA) HSP 1 Score: 484 bits (1247), Expect = 1.060e-169 Identity = 250/322 (77.64%), Postives = 279/322 (86.65%), Query Frame = 1 Query: 4 RIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRR-RPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQTRWVEESSEQAIGSLLIALNVLMLVMAVAQVALVY 966 RIP++VLQVLTQYISITG+ALPLQYL FLRAVDFMSLDMRWLTSPGCAAD+DFYGRLL+ TLAPLVITALIFSPR YL SRR VAPKLR++V+RDVNAFLV TFLIFSGVSLTVFETF CD EL TG YL ADYSL+C D+EG H KYSIYA FM+VVYPVGIP +YA+ILWR A RQR+ Q PSRL SA+SFLW Y+GRAYYWE+AECVRRLML+GLLVFIMPG+PGQSAVAC+FAF T MVYE++RPH + MD WLYTLG IVV SMFTSLLMQ +WVE +SE+AIG+LLIALNVL+LVMA+ QVALVY Sbjct: 5 RIPIVVLQVLTQYISITGLALPLQYLRFLRAVDFMSLDMRWLTSPGCAADVDFYGRLLVTTLAPLVITALIFSPRFYLWLASRRSHGTVAPKLREVVSRDVNAFLVSTFLIFSGVSLTVFETFGCD-ELN--TGKSYLRADYSLRCDDEEGTHAKYSIYAAFMIVVYPVGIPALYASILWRSAVRQRDRTQLPSRLASATSFLWRPYKGRAYYWETAECVRRLMLAGLLVFIMPGSPGQSAVACMFAFFTAMVYEQVRPHQERMDKWLYTLGYGIVVCSMFTSLLMQVQWVEGNSEKAIGNLLIALNVLLLVMALTQVALVY 323
BLAST of jgi.p|Trimin1|154875 vs. uniprot
Match: A0A836CDW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDW6_9STRA) HSP 1 Score: 497 bits (1280), Expect = 4.140e-169 Identity = 262/324 (80.86%), Postives = 276/324 (85.19%), Query Frame = 1 Query: 1 LRIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQTRWVEESSEQAIGSLLIALNVLMLVMAVAQVALVYTK 972 LRIPV+VLQVLTQYISITG+ LPLQYL FLRAVDFMSLDMRWLTSPGCAAD+DFYGRLLIATLAPLVITALIFSPRLYL FISRRRPAVAPKLRQ+V RDVNAFLVFTFLIFSGVSLTVFETFACDK LKEFTG+IYLHADYSL+C+DDEGLHKKYSIYAGFMVVVYPVGIPLMYAAIL + A +QREHG+QPSRL ASSFLWSSY+GRAYYWES EC RRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYE+ P V+ SEQAIGSLLIALNVLMLVMA+AQVALVYT Sbjct: 447 LRIPVVVLQVLTQYISITGLTLPLQYLQFLRAVDFMSLDMRWLTSPGCAADVDFYGRLLIATLAPLVITALIFSPRLYLRFISRRRPAVAPKLRQVVARDVNAFLVFTFLIFSGVSLTVFETFACDKHLKEFTGDIYLHADYSLRCNDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILRQAAVKQREHGRQPSRLAPASSFLWSSYKGRAYYWESVECYRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEQYHP-------------------------------VDGGSEQAIGSLLIALNVLMLVMAIAQVALVYTN 739
BLAST of jgi.p|Trimin1|154875 vs. uniprot
Match: A0A835Z053_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z053_9STRA) HSP 1 Score: 483 bits (1242), Expect = 3.030e-159 Identity = 242/321 (75.39%), Postives = 275/321 (85.67%), Query Frame = 1 Query: 4 RIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQTRWVEESSEQAIGSLLIALNVLMLVMAVAQVALVY 966 RIP++VLQVLTQYISITG+ LPLQYL FLRAVDFMSLDMRWLTSPGCAADI+FYGRLLIATLAPL ITALIF+PR YL ISRRR A+ PKLRQ+VTRDVNAFLVFTFLIFSGVSLTVF+TF CD+ +++G YL ADYSL+C DDEGLH +YSIYA FM+VVYPVGIP++YA+ILWR A +QR+ Q PSRL SA+SFLW Y+GRAY+WE EC+RRLML+GLLVFIMPG PGQSAVAC+FAF+T MVYE+I PH MD WLYTLG I+ SMFTSLLMQ WVE SEQAIG+LLI LNVL+LVMA+ QV +VY Sbjct: 756 RIPIVVLQVLTQYISITGLTLPLQYLEFLRAVDFMSLDMRWLTSPGCAADINFYGRLLIATLAPLAITALIFTPRFYLWIISRRRHAIVPKLRQVVTRDVNAFLVFTFLIFSGVSLTVFQTFGCDE--LQYSGKSYLRADYSLECGDDEGLHTRYSIYAAFMIVVYPVGIPVLYASILWRSAVKQRDRTQLPSRLASATSFLWRPYKGRAYFWEPVECLRRLMLAGLLVFIMPGKPGQSAVACLFAFLTGMVYEQIHPHQQGMDKWLYTLGYGILFTSMFTSLLMQGHWVEGGSEQAIGNLLITLNVLLLVMALVQVGIVY 1074
BLAST of jgi.p|Trimin1|154875 vs. uniprot
Match: A0A836CDK5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK5_9STRA) HSP 1 Score: 481 bits (1237), Expect = 2.010e-157 Identity = 243/321 (75.70%), Postives = 272/321 (84.74%), Query Frame = 1 Query: 4 RIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQTRWVEESSEQAIGSLLIALNVLMLVMAVAQVALVY 966 RIP++VLQVLTQYISITG+ LPLQYL FLRAVDF SLDMRWLTSPGCAADI+FYGRLL+ TLAPL ITAL+F+PR YL ISRRR VAPKLRQ+V RDVNAFLVFTFLIFSGVSLT+FETF CDK E+TG YL ADYSL+C D +GLH KYSIYA FM+ VYPVGIP++YA+ILWR A +QR+ Q PSRL SASSFLW Y+GRA+YWE EC+RRLML+GLLVFIMPG PGQSAVAC+FAF+T M YE+I PH MD WLYTLG I+ SMFTSLLMQ WVE SE+AIGSLLIALNVL+LVMA+AQVALVY Sbjct: 868 RIPIVVLQVLTQYISITGLTLPLQYLEFLRAVDFFSLDMRWLTSPGCAADINFYGRLLVTTLAPLAITALLFTPRFYLRIISRRRHVVAPKLRQVVARDVNAFLVFTFLIFSGVSLTIFETFGCDK--LEYTGKSYLRADYSLECGDAKGLHTKYSIYAAFMIAVYPVGIPVLYASILWRSAVKQRDRMQLPSRLASASSFLWRPYKGRAFYWEPLECLRRLMLAGLLVFIMPGKPGQSAVACLFAFLTGMAYEQIHPHQQGMDKWLYTLGYGILFTSMFTSLLMQVHWVEGDSEKAIGSLLIALNVLLLVMALAQVALVY 1186
BLAST of jgi.p|Trimin1|154875 vs. uniprot
Match: A0A836C9Z8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Z8_9STRA) HSP 1 Score: 476 bits (1224), Expect = 2.330e-155 Identity = 243/321 (75.70%), Postives = 275/321 (85.67%), Query Frame = 1 Query: 4 RIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQTRWVEESSEQAIGSLLIALNVLMLVMAVAQVALVY 966 RIP++VLQVLTQYISITG+ LPLQYL FLRAVDFMSLDM+WLTSPGCAA+IDFYGRLLIATLAPL ITALIF+PR Y+ ISRRR AVA KLRQ+V RDVNAFLVFTFLIFSGVSLTVFETF CDK TGN +L ADYSL+C DDEGLH KYS+YA FM+ VYPVGIP++YA+ILWR A +QR+ Q PS L SASSFLW Y+GRA+YWE EC+RRLML+GLLVFIMPG PGQSAVAC+FAF T +VY++IRPH +MD WLY LG I+ SMFTSLLMQ RWVEE S++AIGSLLIA+NVL+LVMA+AQV LVY Sbjct: 886 RIPIVVLQVLTQYISITGLTLPLQYLEFLRAVDFMSLDMQWLTSPGCAANIDFYGRLLIATLAPLAITALIFTPRFYVWIISRRRHAVASKLRQVVARDVNAFLVFTFLIFSGVSLTVFETFGCDKL---HTGN-FLRADYSLECDDDEGLHAKYSMYAAFMIAVYPVGIPVLYASILWRSAVKQRDRTQLPSSLASASSFLWRPYKGRAFYWEPVECLRRLMLAGLLVFIMPGKPGQSAVACLFAFCTVVVYDQIRPHQQAMDKWLYMLGYGILFSSMFTSLLMQGRWVEEGSQKAIGSLLIAMNVLLLVMALAQVGLVY 1202
BLAST of jgi.p|Trimin1|154875 vs. uniprot
Match: A0A836CFC3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFC3_9STRA) HSP 1 Score: 475 bits (1222), Expect = 6.290e-153 Identity = 241/321 (75.08%), Postives = 275/321 (85.67%), Query Frame = 1 Query: 4 RIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMDMWLYTLGCVIVVFSMFTSLLMQTRWVEESSEQAIGSLLIALNVLMLVMAVAQVALVY 966 RIP++V+QVLTQYISITG+ LPL+YL FL AVDF+SLDMRWLTSPGC ADI+FYGRLL+A LAPLVI+ALIFSPR YL +SRRR AVAPKL+Q+V RDVNAFLVFTFLIFSGVSLTVFETF CD ELK FTG YL ADYS++C DDEGLH K+SIYA FM++VYPVGIP++YA+ILWR + RQ + Q PSRL +ASSFLW Y+GRAYYWE+ EC+RRLML+GLLVFIMPG PGQSAVAC+F F T MVYE+I PH MD WLYTLG I+ SMFTSLLMQ RWVE SEQA+G+LLIALNVL+LVMA+ QVALVY Sbjct: 1156 RIPIVVIQVLTQYISITGLTLPLKYLEFLHAVDFLSLDMRWLTSPGCVADINFYGRLLVAKLAPLVISALIFSPRFYLWIVSRRRLAVAPKLQQVVARDVNAFLVFTFLIFSGVSLTVFETFGCD-ELK-FTGKSYLRADYSIECGDDEGLHTKFSIYAAFMIMVYPVGIPVLYASILWR-SVRQCDRTQLPSRLATASSFLWRPYKGRAYYWETVECLRRLMLAGLLVFIMPGEPGQSAVACLFVFFTAMVYEQIHPHQQGMDKWLYTLGYAILFGSMFTSLLMQVRWVEGGSEQAVGNLLIALNVLLLVMALVQVALVY 1473
BLAST of jgi.p|Trimin1|154875 vs. uniprot
Match: A0A836CBF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBF0_9STRA) HSP 1 Score: 417 bits (1073), Expect = 2.610e-135 Identity = 205/264 (77.65%), Postives = 230/264 (87.12%), Query Frame = 1 Query: 4 RIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAADIDFYGRLLIATLAPLVITALIFSPRLYLCFISRRRPAVAPKLRQIVTRDVNAFLVFTFLIFSGVSLTVFETFACDKELKEFTGNIYLHADYSLQCSDDEGLHKKYSIYAGFMVVVYPVGIPLMYAAILWRVAARQREHGQQPSRLTSASSFLWSSYEGRAYYWESAECVRRLMLSGLLVFIMPGTPGQSAVACIFAFVTTMVYEKIRPHHDSMD 795 RIP++VLQVLTQYISITG+ LPLQYL FLRAVDFMSLDMRWLTSPGCAADI+FYGRLLIATLAPL+ITALIF+PR YL ISR R AVAPKLRQ+VTRDVNAFLVFTFLIFSGVSLTVF+TF CDK ++TG YL DYSL+C DDEGLH K S+YA FM+VVYPVGIP++YA+ILWR A RQR+ Q PSRL SASSFLW SY+GRAYYWE EC+RR ML+GLLVFIMPG+P QSAVAC+FAF T MVYE++RPH + MD Sbjct: 740 RIPIVVLQVLTQYISITGLTLPLQYLEFLRAVDFMSLDMRWLTSPGCAADINFYGRLLIATLAPLLITALIFTPRFYLWIISRERHAVAPKLRQVVTRDVNAFLVFTFLIFSGVSLTVFQTFGCDK--LKYTGKSYLRVDYSLECGDDEGLHSKISMYAAFMIVVYPVGIPVLYASILWRAAMRQRDRTQLPSRLASASSFLWRSYKGRAYYWEPVECLRRPMLAGLLVFIMPGSPAQSAVACMFAFFTAMVYEQVRPHQERMD 1001 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|154875 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2145 ID=mRNA_2145|Name=jgi.p|Trimin1|154875|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=972bp|location=Sequence derived from alignment at Contig_6:860538..861509- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CTTCGGATACCGGTCATCGTCCTGCAAGTGCTCACTCAGTACATCAGCATback to top protein sequence of jgi.p|Trimin1|154875 >Trimin1|154875|gw1.6.336.1 ID=Trimin1|154875|gw1.6.336.1|Name=jgi.p|Trimin1|154875|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=324bp LRIPVIVLQVLTQYISITGIALPLQYLNFLRAVDFMSLDMRWLTSPGCAAback to top mRNA from alignment at Contig_6:860538..861509- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2145 ID=mRNA_2145|Name=jgi.p|Trimin1|154875|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=972bp|location=Sequence derived from alignment at Contig_6:860538..861509- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_6:860538..861509- >mRNA_2145 ID=mRNA_2145|Name=jgi.p|Trimin1|154875|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=972bp|location=Sequence derived from alignment at Contig_6:860538..861509- (Tribonema minus UTEX_B_3156 )back to top |