mRNA_209 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157299
Unique NamemRNA_209
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A835YYF1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF1_9STRA)

HSP 1 Score: 783 bits (2023), Expect = 8.980e-286
Identity = 402/408 (98.53%), Postives = 404/408 (99.02%), Query Frame = 1
Query:    1 MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYCVITGTRAAYGLSSAGGAYVLELDANGEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQCDVGGRLNAGAAYMFERIAGTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 1224
            MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNY VITGTRAAYGLSSAGGAYVLELDANGEWD NAILVPTDVATSD+FGRCVAVSGTYAI+GSQCDVGGRLNAGAAYMFERIAGTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFG GICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRS TTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE
Sbjct:    1 MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYAVITGTRAAYGLSSAGGAYVLELDANGEWDTNAILVPTDVATSDSFGRCVAVSGTYAILGSQCDVGGRLNAGAAYMFERIAGTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGAGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSPTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 408          
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A835Z0X2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0X2_9STRA)

HSP 1 Score: 408 bits (1048), Expect = 1.840e-131
Identity = 224/413 (54.24%), Postives = 297/413 (71.91%), Query Frame = 1
Query:    1 MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYCVITG-TRAAYGLSSAGGAYVLELDAN-GEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGS-QCDVGGRLNAGAAYMFERIAGT--WTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 1224
            +++SG  +T SA S+ Y+ AALT  +P        +G+ VA+  G  Y VI    +   GL+ +G AYVLELD+  GEW  + +L PTD    D+FG  V+VSGTYA+VG+ Q D  G+ +AGAAY+FER +GT  W Q TKL+ASD  P D+FG++V V+GTYAIVGA ++ QLG+A+ G  Y+FERNV +G WEQKA+L+PSD   G+Y+G  + ISGTYAIVGAY K    GGAYI ERN+ + AWEEKAIL   D A   +FG +V+ID +YA+V    K+V++LS+ GGAYV+ER+SGTW   A ++NPDP ASD FG +V+V+G+YAV+GC   DP+ KSGAGSTYL+KR+STTG+W    EWTA+DG+ASD+ G SV ++GTHV+SGA  KT  GV+  GGAY++E
Sbjct:   44 LSSSGTQLTLSAASLYYEAAALTAFDPGASD---YFGSNVAISGG--YAVIGAWAKDPVGLADSGAAYVLELDSGTGEWVHSTVLYPTDAYPGDSFGNGVSVSGTYAVVGAPQSDPTGKTDAGAAYVFERNSGTGAWEQKTKLIASDAMPSDSFGLSVGVNGTYAIVGAYSKKQLGIANFGAVYVFERNVGSGVWEQKASLYPSDYLAGSYYGSSVSISGTYAIVGAYQK-AGGGGAYILERNAGTNAWEEKAILTCPD-ATTAQFGSSVAIDNSYAIVGGPAKSVSSLSSAGGAYVYERISGTWTLTATINNPDPAASDSFGTAVTVNGIYAVIGCNGKDPAGKSGAGSTYLYKRNSTTGVWENKIEWTASDGVASDSFGTSVGVSGTHVLSGAYRKTVNGVSPAGGAYVYE 449          
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A835Z2L7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2L7_9STRA)

HSP 1 Score: 407 bits (1046), Expect = 5.000e-131
Identity = 229/401 (57.11%), Postives = 287/401 (71.57%), Query Frame = 1
Query:   31 SAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYCVITGTRAAYGLSSAGGAYVLELDANG-EWDMNAILVPTDVATSDNFGRCVAVSGTYAIVG-SQCDVGGRLNAGAAYMFERIAGT--WTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMF 1221
            SA SI Y+ AALT  +P        +G +VAV  GS   V    R    +++AG AYVLEL+ +  EW+  A+L PTD  T+D FG  V +SGTYA+VG S  D GG+ +AGAAY FER +GT  W Q TKLVASD  P D+FG +V VSGTYAI GA  R +LG +SSGGAY+FERN  +G WEQK+ LFPSD+PT + FG  + +SGTYAIVGAY K T  GGAYIFERNS++GAWE+KAIL   D     +FG +VSIDG YAVV+A+ K+V +L+  GG Y++ERV+ TW Q A+L+NPDP A+D FG SV+VSGVYAV+GC   DP+SK  AG+TYL+KR+STTG+W    EWTA+DGLASD MG SV ++GTHVVS A  KT  G++  GGAY++
Sbjct:  501 SAASIYYEAAALTAFDPVASD---HFGQSVAVS-GSYAIVGAYWRYPLSIATAGVAYVLELNGSTMEWEHKAVLYPTDAYTNDLFGVAVFISGTYAVVGASASDPGGKTDAGAAYAFERNSGTGAWEQKTKLVASDAMPSDSFGYSVGVSGTYAIAGAHVRTRLGASSSGGAYVFERNSGSGVWEQKSVLFPSDLPTASKFGWSVSVSGTYAIVGAYLK-TGGGGAYIFERNSSTGAWEQKAILTCPDSTI-AQFGYSVSIDGTYAVVSAQNKSVNSLATAGGVYMYERVASTWTQKAILENPDPAATDQFGYSVAVSGVYAVIGCVNKDPASKGNAGATYLYKRNSTTGVWESKMEWTASDGLASDQMGWSVGLSGTHVVSSAYNKTVTGLSTAGGAYVY 895          
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A835YZ62_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ62_9STRA)

HSP 1 Score: 396 bits (1017), Expect = 2.140e-126
Identity = 220/394 (55.84%), Postives = 279/394 (70.81%), Query Frame = 1
Query:    1 MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYCVITGTRAAYGLSSAGGAYVLELD-ANGEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQ-CDVGGRLNAGAAYMFER--IAGTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGA 1170
            M+A G  IT SA ++ ++ AALT  +P        +G AV +   S + V    R   G+++AG AYV+EL+ + GEW+  A+L P+D A +D FG  V+V GTYA++GS   D  G +NAGAAY+FER   +GTW    KLVASD  PGDNFGI+V+VS TYAIVGA +R +LGV++SGGAY+FERN  +G WEQ++ LFPSD+P G+ FG  + ISGTYAIVGAY K+   GGAYIFERN +SG WEEKAIL  SD     +FG  VS+DG YA+V+A  KTV +LS  GGAYVFER++G W Q A+LDNPDP ASD FG SVS SG+YAV+GC L DPSSK+ AGS YL+KR++TTG W    +W A+DGLA D +G SV + GT  V+GA
Sbjct:  540 MSALGTQITLSASTMYFEAAALTAFDPAVSD---MFGNAVGMS-ASYFVVGAFQRDPLGVANAGSAYVMELNNSTGEWEHKAVLYPSDAAATDMFGSAVSVRGTYAVIGSYLADPAGEVNAGAAYVFERDSSSGTWVSGGKLVASDGMPGDNFGISVAVSSTYAIVGAYSRTRLGVSASGGAYVFERNSDSGVWEQRSVLFPSDLPAGSRFGASVSISGTYAIVGAYTKS-GGGGAYIFERNPSSGIWEEKAILTCSDSTV-ARFGFGVSVDGTYAIVSAYYKTVNSLSQAGGAYVFERIAGAWTQTAILDNPDPAASDQFGFSVSASGIYAVIGCNLKDPSSKNSAGSMYLYKRNATTGGWENKVQWAASDGLAGDQLGFSVGVYGTTAVAGA 927          
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A836CBN5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN5_9STRA)

HSP 1 Score: 336 bits (862), Expect = 6.420e-109
Identity = 188/335 (56.12%), Postives = 232/335 (69.25%), Query Frame = 1
Query:  229 WDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQ-CDVGGRLNAGAAYMFERIA--GTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 1224
            W+   +L  +D + SDNFGR V+VSGTY +VG+Q    GGR+ +GAAY FER A  G W QTTK+V +D   GD FG +VSVSGTY ++GA+ + QLG   SG AY+FERN  TG W Q ++LFPSD+PTGA FG  +CISGTYAIVGA NK+   GGAY+FERNSTS  WE+KAILA SD      FG AVSI G+YAVV A  K+V+++S+ GGAYV ER+SGTW Q A LDNPDP ASD FG +V+V GVYAV+GC L DP  K G G+ Y+F+R + TG W    + TA DGL  D  G S S++GT+ V GA  +   G +  G  Y FE
Sbjct:    1 WEHKTMLSASDGSNSDNFGRAVSVSGTYIVVGAQGAGAGGRIFSGAAYAFERNASTGVWGQTTKMVVADGLTGDYFGFSVSVSGTYTVIGASGKTQLGSMLSGRAYVFERNSGTGVWGQASSLFPSDLPTGARFGYSVCISGTYAIVGAMNKS-GGGGAYMFERNSTSSTWEQKAILACSDSTV-ASFGIAVSISGSYAVVGANTKSVSSVSSAGGAYVLERISGTWTQTATLDNPDPVASDMFGQAVNVYGVYAVIGCSLKDPF-KLGGGAAYVFERDAGTGAWVQNTKLTAADGLPLDFFGYSASVSGTYAVVGAIGRYLLGQSGSGAVYAFE 332          
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A835Z582_9STRA (FG-GAP repeat-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z582_9STRA)

HSP 1 Score: 339 bits (869), Expect = 2.270e-102
Identity = 213/482 (44.19%), Postives = 271/482 (56.22%), Query Frame = 1
Query:  106 YGTAVAVDDGSNYCVITGT-RAAYGLSSAGGAYVLELDAN-GEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQC-DVGGRLNAGAAYMFERIAGT-----------------------------------------------------------------WTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWP-----------------------------------------FVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 1224
            +G AVAV    +Y V+    +    + S G AY+LEL+ + GEW+  A+L PTDV T+D FG  VAVSGTYA+VG+   D GG+ +AGAAY+FER +GT                                                                 W   TKLVASD  PGD FG +VSVSGTYA+VGA  R QLGV +SGG Y+FERN  T  WEQKA LFPSD+ TG++FG  + +SGTYA+VGAY K T  GGAY++ERNS +GAWEEKAIL  SD      FG++V+IDG YAVV A  KTV++L++ GGAY+FER+SGTW Q A+LDNPDP ASD+FGISV+V+G+YAV+GC    P+SKS AG+TYL+KR+STTG W                                           +   T   G A+   G +V+++G++ V GA  K    V   GGAY+ E
Sbjct:    7 FGYAVAVS--GSYAVVGAIDKDPLAIPSTGAAYILELNGSTGEWEHKAVLYPTDVRTTDQFGYSVAVSGTYAVVGAYASDPGGKTDAGAAYVFERNSGTGAWTQGTKLVASDAMTNDYFGYTVSVSGTYAIVGAYNKKQQGDALSSGAAAGAAYVFERNSGTGAWASGTKLVASDAMPGDRFGSSVSVSGTYAVVGAYWRTQLGVGNSGGVYVFERNSGTAVWEQKAVLFPSDLATGSFFGT-VSVSGTYAMVGAYGK-TGGGGAYVYERNSGTGAWEEKAILPCSDSTI-ASFGQSVAIDGTYAVVGAYTKTVSSLASAGGAYMFERLSGTWTQTAILDNPDPAASDFFGISVAVNGIYAVIGCNGKYPASKSMAGATYLYKRNSTTGAWENKTASQSVLITGLTALTTYYFWVRAKVTSSSAYIVLSASSGAITTVTPPSGTATLTFGCAVAVSGSYAVVGAQLKDPLSVANAGGAYVLE 483          
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A836CAH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAH9_9STRA)

HSP 1 Score: 306 bits (784), Expect = 1.420e-98
Identity = 181/340 (53.24%), Postives = 225/340 (66.18%), Query Frame = 1
Query:   40 SINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYCVITGT-RAAYGLSSAGGAYVLELDAN-GEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQ-CDVGGRLNAGAAYMFERIA--GTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGIC---ISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGS 1035
            SI Y+ AAL  ++    T    +G  VAVD    Y  +  T ++  GLS AGG Y+LEL+   GEW+  + L+P+    +  FG  V+VSGTY +VG+   D GG  +AGAAY+FER +  G W + T++VASD  P DNF  AVSVSGTYA+VGA  R QLG    GGAY+FERN TTG WEQ+A L PSD+P G      +    +SGTY IVGAY K    GGAY++ERNS +G WE+KAIL ASD  A+  FG  VSI G+YAV+ +  KT  AL+  GGAYVFER+SGTW Q A+L+NPDP+ASD FG SVS+SGV AV+GC    P SKS AGS
Sbjct:    5 SILYEAAALKASDA---TAGNNFGAGVAVD--GRYAAVGATNKSPSGLSGAGGVYMLELNTGTGEWEEKSFLIPSATYGNSAFGYSVSVSGTYVVVGAYGVDPGGLQDAGAAYVFERNSSTGAWEEKTRMVASDGVPIDNFRSAVSVSGTYAVVGAGFRIQLGANQFGGAYVFERNPTTGAWEQQAVLSPSDLPIGTASEHNVSTGSVSGTYLIVGAYAK-AGGGGAYMYERNSGTGVWEQKAILVASDAGASFSFGSGVSISGSYAVIGSSNKTAGALTLAGGAYVFERISGTWTQTAILNNPDPSASDRFGNSVSISGVNAVIGCNGKAPGSKSAAGS 338          
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A6P0KJL3_9CYAN (Uncharacterized protein n=1 Tax=Moorena sp. SIOASIH TaxID=2607817 RepID=A0A6P0KJL3_9CYAN)

HSP 1 Score: 238 bits (606), Expect = 9.170e-66
Identity = 166/383 (43.34%), Postives = 223/383 (58.22%), Query Frame = 1
Query:  106 YGTAVAVDDGSNYCVITGTRAAYGLSSAGGAYVLELDANGEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQCDVGGRLNAGAAYMFER-IAGTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTG-----AYFGGGICISGTYAIVGAYNKNTA---AGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFER-VSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 1224
            +G++VA+ D  N  ++       G + +G AY+ E D++G W     L+ +D    DNFGR VA+S   AIVG+Q +  G  N GAAY+FER  +GTWTQT KL+ASD    D FG +V++SG  AIVGA      G  ++G AYIFER+ ++GTW Q   L  SD         A FG  + ISG  AI+GAY +NT    AG AYIFERNS SG W +   L ASDP A+  FG +V+I GN  ++ A G+  T +   G AY+FER  SGTW Q   L   +P   DYFG SV++SG  A+VG    D   ++ AG  ++F+R S  G W   ++  A+D  A+DN G SV+I+G   + GA  +   G T  G AY+FE
Sbjct: 1351 FGSSVAISD--NIAIVGAYNLDTGGTDSGAAYIFERDSSGTWTQTQKLLASDPEADDNFGRSVAISDNIAIVGAQGENTGGTNTGAAYIFERDSSGTWTQTQKLLASDPEAYDYFGRSVAISGNIAIVGAYNE-DTGGTNAGAAYIFERD-SSGTWTQTQKLLASDPEADHNFAYANFGISVAISGNIAIIGAYAENTGSTEAGAAYIFERNS-SGTWTQTQKLLASDPGASDWFGISVAISGNITIIGA-GEQNTEVR--GSAYIFERDSSGTWTQTQKLLASEPENYDYFGRSVAISGNIAIVGARGEDTGDRN-AGVAFIFERDSN-GTWTQTRKLLASDPEANDNFGQSVAISGNIAIVGAD-REDTGSTDAGAAYIFE 1722          
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A1W9LQ10_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Desulfobacteraceae bacterium IS3 TaxID=1934248 RepID=A0A1W9LQ10_9DELT)

HSP 1 Score: 229 bits (584), Expect = 6.520e-63
Identity = 158/354 (44.63%), Postives = 204/354 (57.63%), Query Frame = 1
Query:  187 AGGAYVLELDANGEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQCDVGGRLNAGAAYMFERIA-GTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAY---NKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAA---EGKTVTALSNVGGAYVFERVS-GTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 1224
            +G AY+   ++ G W   A L  TD A  D FGR V++SG YA+VG+  D     N+G+AY+F R + G+WTQ  KL A D    D FG +VS+SG YA++GA      G   SG AYIF RN + G+W Q+A L   D     YFG  + ISG YA+VGAY   +K   +G AYIF RNS  G W ++A L A+D AA   FG +VSI G+YA+V A   +G +       G AY+F R S GTW Q A L   D    DYFG SVS+SG YA+VG Y +D    S +GS Y+F+R+S  G W    + TANDG A +N G SVSI+  + +  A      G T  G AY F+
Sbjct:   71 SGSAYIFRRNSEGSWTQQAKLTATDGAERDCFGRSVSISGDYALVGASGDDDKGYNSGSAYIFRRNSEGSWTQQAKLTADDGAADDYFGNSVSISGDYALIGAYEDDDKG-GKSGSAYIFRRN-SDGSWTQQAKLTADDGAAYEYFGYSVSISGDYALVGAYWDDDKGYDSGSAYIFRRNSD-GLWTQQAKLTATDGAAEDYFGWSVSISGDYALVGAYLDDGAS-------GSAYIFRRNSDGTWTQQAKLTADDGATYDYFGRSVSISGDYALVGAYEDDDKGGS-SGSAYIFRRNSD-GAWTQQAKLTANDGAAGNNFGNSVSISVDYALVAAYEDDDKG-TWSGSAYFFK 411          
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: UPI0016874209 (FG-GAP repeat protein n=1 Tax=Spirosoma profusum TaxID=2771354 RepID=UPI0016874209)

HSP 1 Score: 216 bits (549), Expect = 9.080e-62
Identity = 150/376 (39.89%), Postives = 205/376 (54.52%), Query Frame = 1
Query:  103 KYGTAVAVDDGSNYCVITGT-RAAYGLSSAGGAYVLELDANGEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQCD-VGGRLNAGAAYMFERIAGTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNK----NTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGS-VSIA-GTHVVSGASFKTSAGVTIMG 1206
            ++GT+VA+    +Y +I    +   G  S G AY+     N  W+    L   D A SD FGR VA+SG YAIVG+    +    + GAAY+F R    W    +L A+D  P D+FG +V++SG  AI+GA  ++  GV S G AY+F R+  T  W Q+  L  SD   G YFG  + ISG YAIVGA +K    NT  G AY+F R    G W ++    A+D AAN  FG AV+I G+YA+V A  KTV + S  G AYVF R   TW Q  +  N D  A+D FG SVS+SG YAV+G       S    G+ Y+FKRS ++    ++++ +  D   SD   GS V ++ GT ++ G  F+ + G    G
Sbjct:  111 QFGTSVAIS--GDYAIIGANGKTIGGKLSQGAAYIFVRSGN-SWNQLQQLTANDGAASDLFGRSVAISGDYAIVGAHFKTINSSTSQGAAYVFLRSGNNWNLQQRLTANDGAPSDHFGWSVAISGDNAIIGAENKFVFGV-SQGVAYVFTRSGIT--WTQQQRLTASDGTGGDYFGSCVAISGDYAIVGAPSKAISPNTNQGAAYMFVRGG--GTWTQQQRFVANDGAANDHFGNAVAISGDYAIVGAANKTVNSNSAQGAAYVFARTGSTWNQQLLTAN-DGVANDDFGTSVSISGDYAVIGAASKTIGSNQYQGAAYVFKRSGSS----WIRQQSVTDNSTSDTFNGSSVGLSNGTFIIGGPGFQNNRGKVAFG 473          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYF1_9STRA8.980e-28698.53Uncharacterized protein (Fragment) n=2 Tax=Tribone... [more]
A0A835Z0X2_9STRA1.840e-13154.24Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z2L7_9STRA5.000e-13157.11Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YZ62_9STRA2.140e-12655.84Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CBN5_9STRA6.420e-10956.12Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z582_9STRA2.270e-10244.19FG-GAP repeat-domain-containing protein (Fragment)... [more]
A0A836CAH9_9STRA1.420e-9853.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6P0KJL3_9CYAN9.170e-6643.34Uncharacterized protein n=1 Tax=Moorena sp. SIOASI... [more]
A0A1W9LQ10_9DELT6.520e-6344.63Uncharacterized protein (Fragment) n=1 Tax=Desulfo... [more]
UPI00168742099.080e-6239.89FG-GAP repeat protein n=1 Tax=Spirosoma profusum T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:725404..726627 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157299|e_gw1.3.231.1
DescriptionFG-GAP repeat
COG categoryS
Max annot lvl976|Bacteroidetes
EggNOG OGsCOG3266@1|root,COG3266@2|Bacteria,4NQBS@976|Bacteroidetes,47QPM@768503|Cytophagia
Evalue2.65e-59
Seed ortholog1089547.KB913013_gene2346
Hectar predicted targeting categoryother localisation
TranscriptId157621
TrackFilteredModels1
ProteinId157299
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157299gene_209Tribonema minus UTEX_B_3156 geneContig_3 725404..726627 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_209_1exon_209_1Tribonema minus UTEX_B_3156 exonContig_3 725404..726627 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_209CDS_209Tribonema minus UTEX_B_3156 CDSContig_3 725404..726627 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157299Trimin1|157299|e_gw1.3.231.1Tribonema minus UTEX_B_3156 polypeptideContig_3 725404..726627 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_209 ID=mRNA_209|Name=jgi.p|Trimin1|157299|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1224bp|location=Sequence derived from alignment at Contig_3:725404..726627+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACCGCTAGCGGAGTAGCGATCACCACGTCTGCGGTGAGCATCAACTA
CCAGACGGCCGCCCTGACATGCAACGAGCCACCGCCTGACACTGGTTACA
TCAAGTATGGCACCGCTGTAGCTGTTGACGATGGTTCAAATTACTGCGTA
ATTACAGGCACCAGAGCAGCTTACGGCTTGAGCAGCGCAGGGGGAGCGTA
CGTGCTGGAGCTCGACGCTAACGGGGAGTGGGACATGAACGCGATACTGG
TGCCGACCGATGTAGCTACGAGTGACAATTTTGGTAGATGCGTCGCAGTG
AGCGGAACGTATGCAATTGTGGGCAGTCAATGTGATGTAGGGGGAAGGCT
TAATGCTGGTGCCGCATACATGTTTGAGCGCATTGCAGGAACCTGGACTC
AGACTACAAAACTTGTAGCCAGTGATGTATGCCCAGGAGATAACTTTGGT
ATAGCGGTGTCTGTCAGTGGAACTTACGCCATCGTAGGCGCCACCACCCG
GTATCAGCTCGGGGTTGCTTCCTCCGGCGGAGCTTACATCTTTGAACGGA
ACGTCACAACTGGAACCTGGGAACAGAAGGCGACGCTGTTCCCCAGCGAC
GTGCCGACAGGGGCGTATTTCGGCGGCGGCATTTGCATTTCAGGGACCTA
TGCCATCGTCGGCGCGTACAACAAGAACACTGCTGCAGGGGGCGCGTACA
TCTTTGAGCGTAATTCTACCTCTGGTGCATGGGAGGAAAAGGCAATCCTA
GCAGCATCCGATCCCGCAGCCAACATGAAGTTCGGAAAGGCGGTATCCAT
CGATGGCAACTATGCAGTTGTGGCCGCCGAGGGCAAGACTGTCACCGCAC
TGAGTAATGTAGGTGGAGCCTACGTATTTGAAAGGGTATCCGGGACTTGG
GGGCAGGTGGCGATGCTGGATAATCCTGACCCGACTGCCTCTGACTATTT
TGGAATATCAGTGAGTGTCAGCGGCGTTTACGCAGTCGTCGGGTGTTACC
TGAATGATCCTTCATCAAAGTCAGGCGCCGGTTCTACATACCTCTTCAAG
AGGAGCTCGACCACTGGATTGTGGCCATTCGTCAAGGAATGGACTGCAAA
CGACGGTCTGGCGAGTGACAACATGGGTGGCAGTGTGAGCATCGCAGGGA
CGCATGTCGTCTCTGGTGCAAGCTTTAAGACCTCCGCAGGTGTCACAATT
ATGGGAGGTGCTTACATGTTCGAG
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protein sequence of jgi.p|Trimin1|157299

>Trimin1|157299|e_gw1.3.231.1 ID=Trimin1|157299|e_gw1.3.231.1|Name=jgi.p|Trimin1|157299|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=408bp
MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYCV
ITGTRAAYGLSSAGGAYVLELDANGEWDMNAILVPTDVATSDNFGRCVAV
SGTYAIVGSQCDVGGRLNAGAAYMFERIAGTWTQTTKLVASDVCPGDNFG
IAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSD
VPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAIL
AASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTW
GQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFK
RSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTI
MGGAYMFE
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mRNA from alignment at Contig_3:725404..726627+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_209 ID=mRNA_209|Name=jgi.p|Trimin1|157299|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1224bp|location=Sequence derived from alignment at Contig_3:725404..726627+ (Tribonema minus UTEX_B_3156 )
ATGACCGCTAGCGGAGTAGCGATCACCACGTCTGCGGTGAGCATCAACTA CCAGACGGCCGCCCTGACATGCAACGAGCCACCGCCTGACACTGGTTACA TCAAGTATGGCACCGCTGTAGCTGTTGACGATGGTTCAAATTACTGCGTA ATTACAGGCACCAGAGCAGCTTACGGCTTGAGCAGCGCAGGGGGAGCGTA CGTGCTGGAGCTCGACGCTAACGGGGAGTGGGACATGAACGCGATACTGG TGCCGACCGATGTAGCTACGAGTGACAATTTTGGTAGATGCGTCGCAGTG AGCGGAACGTATGCAATTGTGGGCAGTCAATGTGATGTAGGGGGAAGGCT TAATGCTGGTGCCGCATACATGTTTGAGCGCATTGCAGGAACCTGGACTC AGACTACAAAACTTGTAGCCAGTGATGTATGCCCAGGAGATAACTTTGGT ATAGCGGTGTCTGTCAGTGGAACTTACGCCATCGTAGGCGCCACCACCCG GTATCAGCTCGGGGTTGCTTCCTCCGGCGGAGCTTACATCTTTGAACGGA ACGTCACAACTGGAACCTGGGAACAGAAGGCGACGCTGTTCCCCAGCGAC GTGCCGACAGGGGCGTATTTCGGCGGCGGCATTTGCATTTCAGGGACCTA TGCCATCGTCGGCGCGTACAACAAGAACACTGCTGCAGGGGGCGCGTACA TCTTTGAGCGTAATTCTACCTCTGGTGCATGGGAGGAAAAGGCAATCCTA GCAGCATCCGATCCCGCAGCCAACATGAAGTTCGGAAAGGCGGTATCCAT CGATGGCAACTATGCAGTTGTGGCCGCCGAGGGCAAGACTGTCACCGCAC TGAGTAATGTAGGTGGAGCCTACGTATTTGAAAGGGTATCCGGGACTTGG GGGCAGGTGGCGATGCTGGATAATCCTGACCCGACTGCCTCTGACTATTT TGGAATATCAGTGAGTGTCAGCGGCGTTTACGCAGTCGTCGGGTGTTACC TGAATGATCCTTCATCAAAGTCAGGCGCCGGTTCTACATACCTCTTCAAG AGGAGCTCGACCACTGGATTGTGGCCATTCGTCAAGGAATGGACTGCAAA CGACGGTCTGGCGAGTGACAACATGGGTGGCAGTGTGAGCATCGCAGGGA CGCATGTCGTCTCTGGTGCAAGCTTTAAGACCTCCGCAGGTGTCACAATT ATGGGAGGTGCTTACATGTTCGAG
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Coding sequence (CDS) from alignment at Contig_3:725404..726627+

>mRNA_209 ID=mRNA_209|Name=jgi.p|Trimin1|157299|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1224bp|location=Sequence derived from alignment at Contig_3:725404..726627+ (Tribonema minus UTEX_B_3156 )
ATGACCGCTAGCGGAGTAGCGATCACCACGTCTGCGGTGAGCATCAACTA
CCAGACGGCCGCCCTGACATGCAACGAGCCACCGCCTGACACTGGTTACA
TCAAGTATGGCACCGCTGTAGCTGTTGACGATGGTTCAAATTACTGCGTA
ATTACAGGCACCAGAGCAGCTTACGGCTTGAGCAGCGCAGGGGGAGCGTA
CGTGCTGGAGCTCGACGCTAACGGGGAGTGGGACATGAACGCGATACTGG
TGCCGACCGATGTAGCTACGAGTGACAATTTTGGTAGATGCGTCGCAGTG
AGCGGAACGTATGCAATTGTGGGCAGTCAATGTGATGTAGGGGGAAGGCT
TAATGCTGGTGCCGCATACATGTTTGAGCGCATTGCAGGAACCTGGACTC
AGACTACAAAACTTGTAGCCAGTGATGTATGCCCAGGAGATAACTTTGGT
ATAGCGGTGTCTGTCAGTGGAACTTACGCCATCGTAGGCGCCACCACCCG
GTATCAGCTCGGGGTTGCTTCCTCCGGCGGAGCTTACATCTTTGAACGGA
ACGTCACAACTGGAACCTGGGAACAGAAGGCGACGCTGTTCCCCAGCGAC
GTGCCGACAGGGGCGTATTTCGGCGGCGGCATTTGCATTTCAGGGACCTA
TGCCATCGTCGGCGCGTACAACAAGAACACTGCTGCAGGGGGCGCGTACA
TCTTTGAGCGTAATTCTACCTCTGGTGCATGGGAGGAAAAGGCAATCCTA
GCAGCATCCGATCCCGCAGCCAACATGAAGTTCGGAAAGGCGGTATCCAT
CGATGGCAACTATGCAGTTGTGGCCGCCGAGGGCAAGACTGTCACCGCAC
TGAGTAATGTAGGTGGAGCCTACGTATTTGAAAGGGTATCCGGGACTTGG
GGGCAGGTGGCGATGCTGGATAATCCTGACCCGACTGCCTCTGACTATTT
TGGAATATCAGTGAGTGTCAGCGGCGTTTACGCAGTCGTCGGGTGTTACC
TGAATGATCCTTCATCAAAGTCAGGCGCCGGTTCTACATACCTCTTCAAG
AGGAGCTCGACCACTGGATTGTGGCCATTCGTCAAGGAATGGACTGCAAA
CGACGGTCTGGCGAGTGACAACATGGGTGGCAGTGTGAGCATCGCAGGGA
CGCATGTCGTCTCTGGTGCAAGCTTTAAGACCTCCGCAGGTGTCACAATT
ATGGGAGGTGCTTACATGTTCGAG
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