mRNA_209 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A835YYF1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF1_9STRA) HSP 1 Score: 783 bits (2023), Expect = 8.980e-286 Identity = 402/408 (98.53%), Postives = 404/408 (99.02%), Query Frame = 1 Query: 1 MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYCVITGTRAAYGLSSAGGAYVLELDANGEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQCDVGGRLNAGAAYMFERIAGTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 1224 MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNY VITGTRAAYGLSSAGGAYVLELDANGEWD NAILVPTDVATSD+FGRCVAVSGTYAI+GSQCDVGGRLNAGAAYMFERIAGTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFG GICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRS TTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE Sbjct: 1 MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYAVITGTRAAYGLSSAGGAYVLELDANGEWDTNAILVPTDVATSDSFGRCVAVSGTYAILGSQCDVGGRLNAGAAYMFERIAGTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGAGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSPTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 408
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A835Z0X2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0X2_9STRA) HSP 1 Score: 408 bits (1048), Expect = 1.840e-131 Identity = 224/413 (54.24%), Postives = 297/413 (71.91%), Query Frame = 1 Query: 1 MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYCVITG-TRAAYGLSSAGGAYVLELDAN-GEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGS-QCDVGGRLNAGAAYMFERIAGT--WTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 1224 +++SG +T SA S+ Y+ AALT +P +G+ VA+ G Y VI + GL+ +G AYVLELD+ GEW + +L PTD D+FG V+VSGTYA+VG+ Q D G+ +AGAAY+FER +GT W Q TKL+ASD P D+FG++V V+GTYAIVGA ++ QLG+A+ G Y+FERNV +G WEQKA+L+PSD G+Y+G + ISGTYAIVGAY K GGAYI ERN+ + AWEEKAIL D A +FG +V+ID +YA+V K+V++LS+ GGAYV+ER+SGTW A ++NPDP ASD FG +V+V+G+YAV+GC DP+ KSGAGSTYL+KR+STTG+W EWTA+DG+ASD+ G SV ++GTHV+SGA KT GV+ GGAY++E Sbjct: 44 LSSSGTQLTLSAASLYYEAAALTAFDPGASD---YFGSNVAISGG--YAVIGAWAKDPVGLADSGAAYVLELDSGTGEWVHSTVLYPTDAYPGDSFGNGVSVSGTYAVVGAPQSDPTGKTDAGAAYVFERNSGTGAWEQKTKLIASDAMPSDSFGLSVGVNGTYAIVGAYSKKQLGIANFGAVYVFERNVGSGVWEQKASLYPSDYLAGSYYGSSVSISGTYAIVGAYQK-AGGGGAYILERNAGTNAWEEKAILTCPD-ATTAQFGSSVAIDNSYAIVGGPAKSVSSLSSAGGAYVYERISGTWTLTATINNPDPAASDSFGTAVTVNGIYAVIGCNGKDPAGKSGAGSTYLYKRNSTTGVWENKIEWTASDGVASDSFGTSVGVSGTHVLSGAYRKTVNGVSPAGGAYVYE 449
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A835Z2L7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2L7_9STRA) HSP 1 Score: 407 bits (1046), Expect = 5.000e-131 Identity = 229/401 (57.11%), Postives = 287/401 (71.57%), Query Frame = 1 Query: 31 SAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYCVITGTRAAYGLSSAGGAYVLELDANG-EWDMNAILVPTDVATSDNFGRCVAVSGTYAIVG-SQCDVGGRLNAGAAYMFERIAGT--WTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMF 1221 SA SI Y+ AALT +P +G +VAV GS V R +++AG AYVLEL+ + EW+ A+L PTD T+D FG V +SGTYA+VG S D GG+ +AGAAY FER +GT W Q TKLVASD P D+FG +V VSGTYAI GA R +LG +SSGGAY+FERN +G WEQK+ LFPSD+PT + FG + +SGTYAIVGAY K T GGAYIFERNS++GAWE+KAIL D +FG +VSIDG YAVV+A+ K+V +L+ GG Y++ERV+ TW Q A+L+NPDP A+D FG SV+VSGVYAV+GC DP+SK AG+TYL+KR+STTG+W EWTA+DGLASD MG SV ++GTHVVS A KT G++ GGAY++ Sbjct: 501 SAASIYYEAAALTAFDPVASD---HFGQSVAVS-GSYAIVGAYWRYPLSIATAGVAYVLELNGSTMEWEHKAVLYPTDAYTNDLFGVAVFISGTYAVVGASASDPGGKTDAGAAYAFERNSGTGAWEQKTKLVASDAMPSDSFGYSVGVSGTYAIAGAHVRTRLGASSSGGAYVFERNSGSGVWEQKSVLFPSDLPTASKFGWSVSVSGTYAIVGAYLK-TGGGGAYIFERNSSTGAWEQKAILTCPDSTI-AQFGYSVSIDGTYAVVSAQNKSVNSLATAGGVYMYERVASTWTQKAILENPDPAATDQFGYSVAVSGVYAVIGCVNKDPASKGNAGATYLYKRNSTTGVWESKMEWTASDGLASDQMGWSVGLSGTHVVSSAYNKTVTGLSTAGGAYVY 895
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A835YZ62_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ62_9STRA) HSP 1 Score: 396 bits (1017), Expect = 2.140e-126 Identity = 220/394 (55.84%), Postives = 279/394 (70.81%), Query Frame = 1 Query: 1 MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYCVITGTRAAYGLSSAGGAYVLELD-ANGEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQ-CDVGGRLNAGAAYMFER--IAGTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGA 1170 M+A G IT SA ++ ++ AALT +P +G AV + S + V R G+++AG AYV+EL+ + GEW+ A+L P+D A +D FG V+V GTYA++GS D G +NAGAAY+FER +GTW KLVASD PGDNFGI+V+VS TYAIVGA +R +LGV++SGGAY+FERN +G WEQ++ LFPSD+P G+ FG + ISGTYAIVGAY K+ GGAYIFERN +SG WEEKAIL SD +FG VS+DG YA+V+A KTV +LS GGAYVFER++G W Q A+LDNPDP ASD FG SVS SG+YAV+GC L DPSSK+ AGS YL+KR++TTG W +W A+DGLA D +G SV + GT V+GA Sbjct: 540 MSALGTQITLSASTMYFEAAALTAFDPAVSD---MFGNAVGMS-ASYFVVGAFQRDPLGVANAGSAYVMELNNSTGEWEHKAVLYPSDAAATDMFGSAVSVRGTYAVIGSYLADPAGEVNAGAAYVFERDSSSGTWVSGGKLVASDGMPGDNFGISVAVSSTYAIVGAYSRTRLGVSASGGAYVFERNSDSGVWEQRSVLFPSDLPAGSRFGASVSISGTYAIVGAYTKS-GGGGAYIFERNPSSGIWEEKAILTCSDSTV-ARFGFGVSVDGTYAIVSAYYKTVNSLSQAGGAYVFERIAGAWTQTAILDNPDPAASDQFGFSVSASGIYAVIGCNLKDPSSKNSAGSMYLYKRNATTGGWENKVQWAASDGLAGDQLGFSVGVYGTTAVAGA 927
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A836CBN5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN5_9STRA) HSP 1 Score: 336 bits (862), Expect = 6.420e-109 Identity = 188/335 (56.12%), Postives = 232/335 (69.25%), Query Frame = 1 Query: 229 WDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQ-CDVGGRLNAGAAYMFERIA--GTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 1224 W+ +L +D + SDNFGR V+VSGTY +VG+Q GGR+ +GAAY FER A G W QTTK+V +D GD FG +VSVSGTY ++GA+ + QLG SG AY+FERN TG W Q ++LFPSD+PTGA FG +CISGTYAIVGA NK+ GGAY+FERNSTS WE+KAILA SD FG AVSI G+YAVV A K+V+++S+ GGAYV ER+SGTW Q A LDNPDP ASD FG +V+V GVYAV+GC L DP K G G+ Y+F+R + TG W + TA DGL D G S S++GT+ V GA + G + G Y FE Sbjct: 1 WEHKTMLSASDGSNSDNFGRAVSVSGTYIVVGAQGAGAGGRIFSGAAYAFERNASTGVWGQTTKMVVADGLTGDYFGFSVSVSGTYTVIGASGKTQLGSMLSGRAYVFERNSGTGVWGQASSLFPSDLPTGARFGYSVCISGTYAIVGAMNKS-GGGGAYMFERNSTSSTWEQKAILACSDSTV-ASFGIAVSISGSYAVVGANTKSVSSVSSAGGAYVLERISGTWTQTATLDNPDPVASDMFGQAVNVYGVYAVIGCSLKDPF-KLGGGAAYVFERDAGTGAWVQNTKLTAADGLPLDFFGYSASVSGTYAVVGAIGRYLLGQSGSGAVYAFE 332
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A835Z582_9STRA (FG-GAP repeat-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z582_9STRA) HSP 1 Score: 339 bits (869), Expect = 2.270e-102 Identity = 213/482 (44.19%), Postives = 271/482 (56.22%), Query Frame = 1 Query: 106 YGTAVAVDDGSNYCVITGT-RAAYGLSSAGGAYVLELDAN-GEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQC-DVGGRLNAGAAYMFERIAGT-----------------------------------------------------------------WTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWP-----------------------------------------FVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 1224 +G AVAV +Y V+ + + S G AY+LEL+ + GEW+ A+L PTDV T+D FG VAVSGTYA+VG+ D GG+ +AGAAY+FER +GT W TKLVASD PGD FG +VSVSGTYA+VGA R QLGV +SGG Y+FERN T WEQKA LFPSD+ TG++FG + +SGTYA+VGAY K T GGAY++ERNS +GAWEEKAIL SD FG++V+IDG YAVV A KTV++L++ GGAY+FER+SGTW Q A+LDNPDP ASD+FGISV+V+G+YAV+GC P+SKS AG+TYL+KR+STTG W + T G A+ G +V+++G++ V GA K V GGAY+ E Sbjct: 7 FGYAVAVS--GSYAVVGAIDKDPLAIPSTGAAYILELNGSTGEWEHKAVLYPTDVRTTDQFGYSVAVSGTYAVVGAYASDPGGKTDAGAAYVFERNSGTGAWTQGTKLVASDAMTNDYFGYTVSVSGTYAIVGAYNKKQQGDALSSGAAAGAAYVFERNSGTGAWASGTKLVASDAMPGDRFGSSVSVSGTYAVVGAYWRTQLGVGNSGGVYVFERNSGTAVWEQKAVLFPSDLATGSFFGT-VSVSGTYAMVGAYGK-TGGGGAYVYERNSGTGAWEEKAILPCSDSTI-ASFGQSVAIDGTYAVVGAYTKTVSSLASAGGAYMFERLSGTWTQTAILDNPDPAASDFFGISVAVNGIYAVIGCNGKYPASKSMAGATYLYKRNSTTGAWENKTASQSVLITGLTALTTYYFWVRAKVTSSSAYIVLSASSGAITTVTPPSGTATLTFGCAVAVSGSYAVVGAQLKDPLSVANAGGAYVLE 483
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A836CAH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAH9_9STRA) HSP 1 Score: 306 bits (784), Expect = 1.420e-98 Identity = 181/340 (53.24%), Postives = 225/340 (66.18%), Query Frame = 1 Query: 40 SINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYCVITGT-RAAYGLSSAGGAYVLELDAN-GEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQ-CDVGGRLNAGAAYMFERIA--GTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGIC---ISGTYAIVGAYNKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGS 1035 SI Y+ AAL ++ T +G VAVD Y + T ++ GLS AGG Y+LEL+ GEW+ + L+P+ + FG V+VSGTY +VG+ D GG +AGAAY+FER + G W + T++VASD P DNF AVSVSGTYA+VGA R QLG GGAY+FERN TTG WEQ+A L PSD+P G + +SGTY IVGAY K GGAY++ERNS +G WE+KAIL ASD A+ FG VSI G+YAV+ + KT AL+ GGAYVFER+SGTW Q A+L+NPDP+ASD FG SVS+SGV AV+GC P SKS AGS Sbjct: 5 SILYEAAALKASDA---TAGNNFGAGVAVD--GRYAAVGATNKSPSGLSGAGGVYMLELNTGTGEWEEKSFLIPSATYGNSAFGYSVSVSGTYVVVGAYGVDPGGLQDAGAAYVFERNSSTGAWEEKTRMVASDGVPIDNFRSAVSVSGTYAVVGAGFRIQLGANQFGGAYVFERNPTTGAWEQQAVLSPSDLPIGTASEHNVSTGSVSGTYLIVGAYAK-AGGGGAYMYERNSGTGVWEQKAILVASDAGASFSFGSGVSISGSYAVIGSSNKTAGALTLAGGAYVFERISGTWTQTAILNNPDPSASDRFGNSVSISGVNAVIGCNGKAPGSKSAAGS 338
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A6P0KJL3_9CYAN (Uncharacterized protein n=1 Tax=Moorena sp. SIOASIH TaxID=2607817 RepID=A0A6P0KJL3_9CYAN) HSP 1 Score: 238 bits (606), Expect = 9.170e-66 Identity = 166/383 (43.34%), Postives = 223/383 (58.22%), Query Frame = 1 Query: 106 YGTAVAVDDGSNYCVITGTRAAYGLSSAGGAYVLELDANGEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQCDVGGRLNAGAAYMFER-IAGTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTG-----AYFGGGICISGTYAIVGAYNKNTA---AGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFER-VSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 1224 +G++VA+ D N ++ G + +G AY+ E D++G W L+ +D DNFGR VA+S AIVG+Q + G N GAAY+FER +GTWTQT KL+ASD D FG +V++SG AIVGA G ++G AYIFER+ ++GTW Q L SD A FG + ISG AI+GAY +NT AG AYIFERNS SG W + L ASDP A+ FG +V+I GN ++ A G+ T + G AY+FER SGTW Q L +P DYFG SV++SG A+VG D ++ AG ++F+R S G W ++ A+D A+DN G SV+I+G + GA + G T G AY+FE Sbjct: 1351 FGSSVAISD--NIAIVGAYNLDTGGTDSGAAYIFERDSSGTWTQTQKLLASDPEADDNFGRSVAISDNIAIVGAQGENTGGTNTGAAYIFERDSSGTWTQTQKLLASDPEAYDYFGRSVAISGNIAIVGAYNE-DTGGTNAGAAYIFERD-SSGTWTQTQKLLASDPEADHNFAYANFGISVAISGNIAIIGAYAENTGSTEAGAAYIFERNS-SGTWTQTQKLLASDPGASDWFGISVAISGNITIIGA-GEQNTEVR--GSAYIFERDSSGTWTQTQKLLASEPENYDYFGRSVAISGNIAIVGARGEDTGDRN-AGVAFIFERDSN-GTWTQTRKLLASDPEANDNFGQSVAISGNIAIVGAD-REDTGSTDAGAAYIFE 1722
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: A0A1W9LQ10_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Desulfobacteraceae bacterium IS3 TaxID=1934248 RepID=A0A1W9LQ10_9DELT) HSP 1 Score: 229 bits (584), Expect = 6.520e-63 Identity = 158/354 (44.63%), Postives = 204/354 (57.63%), Query Frame = 1 Query: 187 AGGAYVLELDANGEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQCDVGGRLNAGAAYMFERIA-GTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAY---NKNTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAA---EGKTVTALSNVGGAYVFERVS-GTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGSVSIAGTHVVSGASFKTSAGVTIMGGAYMFE 1224 +G AY+ ++ G W A L TD A D FGR V++SG YA+VG+ D N+G+AY+F R + G+WTQ KL A D D FG +VS+SG YA++GA G SG AYIF RN + G+W Q+A L D YFG + ISG YA+VGAY +K +G AYIF RNS G W ++A L A+D AA FG +VSI G+YA+V A +G + G AY+F R S GTW Q A L D DYFG SVS+SG YA+VG Y +D S +GS Y+F+R+S G W + TANDG A +N G SVSI+ + + A G T G AY F+ Sbjct: 71 SGSAYIFRRNSEGSWTQQAKLTATDGAERDCFGRSVSISGDYALVGASGDDDKGYNSGSAYIFRRNSEGSWTQQAKLTADDGAADDYFGNSVSISGDYALIGAYEDDDKG-GKSGSAYIFRRN-SDGSWTQQAKLTADDGAAYEYFGYSVSISGDYALVGAYWDDDKGYDSGSAYIFRRNSD-GLWTQQAKLTATDGAAEDYFGWSVSISGDYALVGAYLDDGAS-------GSAYIFRRNSDGTWTQQAKLTADDGATYDYFGRSVSISGDYALVGAYEDDDKGGS-SGSAYIFRRNSD-GAWTQQAKLTANDGAAGNNFGNSVSISVDYALVAAYEDDDKG-TWSGSAYFFK 411
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Match: UPI0016874209 (FG-GAP repeat protein n=1 Tax=Spirosoma profusum TaxID=2771354 RepID=UPI0016874209) HSP 1 Score: 216 bits (549), Expect = 9.080e-62 Identity = 150/376 (39.89%), Postives = 205/376 (54.52%), Query Frame = 1 Query: 103 KYGTAVAVDDGSNYCVITGT-RAAYGLSSAGGAYVLELDANGEWDMNAILVPTDVATSDNFGRCVAVSGTYAIVGSQCD-VGGRLNAGAAYMFERIAGTWTQTTKLVASDVCPGDNFGIAVSVSGTYAIVGATTRYQLGVASSGGAYIFERNVTTGTWEQKATLFPSDVPTGAYFGGGICISGTYAIVGAYNK----NTAAGGAYIFERNSTSGAWEEKAILAASDPAANMKFGKAVSIDGNYAVVAAEGKTVTALSNVGGAYVFERVSGTWGQVAMLDNPDPTASDYFGISVSVSGVYAVVGCYLNDPSSKSGAGSTYLFKRSSTTGLWPFVKEWTANDGLASDNMGGS-VSIA-GTHVVSGASFKTSAGVTIMG 1206 ++GT+VA+ +Y +I + G S G AY+ N W+ L D A SD FGR VA+SG YAIVG+ + + GAAY+F R W +L A+D P D+FG +V++SG AI+GA ++ GV S G AY+F R+ T W Q+ L SD G YFG + ISG YAIVGA +K NT G AY+F R G W ++ A+D AAN FG AV+I G+YA+V A KTV + S G AYVF R TW Q + N D A+D FG SVS+SG YAV+G S G+ Y+FKRS ++ ++++ + D SD GS V ++ GT ++ G F+ + G G Sbjct: 111 QFGTSVAIS--GDYAIIGANGKTIGGKLSQGAAYIFVRSGN-SWNQLQQLTANDGAASDLFGRSVAISGDYAIVGAHFKTINSSTSQGAAYVFLRSGNNWNLQQRLTANDGAPSDHFGWSVAISGDNAIIGAENKFVFGV-SQGVAYVFTRSGIT--WTQQQRLTASDGTGGDYFGSCVAISGDYAIVGAPSKAISPNTNQGAAYMFVRGG--GTWTQQQRFVANDGAANDHFGNAVAISGDYAIVGAANKTVNSNSAQGAAYVFARTGSTWNQQLLTAN-DGVANDDFGTSVSISGDYAVIGAASKTIGSNQYQGAAYVFKRSGSS----WIRQQSVTDNSTSDTFNGSSVGLSNGTFIIGGPGFQNNRGKVAFG 473 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157299 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_209 ID=mRNA_209|Name=jgi.p|Trimin1|157299|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1224bp|location=Sequence derived from alignment at Contig_3:725404..726627+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACCGCTAGCGGAGTAGCGATCACCACGTCTGCGGTGAGCATCAACTAback to top protein sequence of jgi.p|Trimin1|157299 >Trimin1|157299|e_gw1.3.231.1 ID=Trimin1|157299|e_gw1.3.231.1|Name=jgi.p|Trimin1|157299|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=408bp MTASGVAITTSAVSINYQTAALTCNEPPPDTGYIKYGTAVAVDDGSNYCVback to top mRNA from alignment at Contig_3:725404..726627+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_209 ID=mRNA_209|Name=jgi.p|Trimin1|157299|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1224bp|location=Sequence derived from alignment at Contig_3:725404..726627+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:725404..726627+ >mRNA_209 ID=mRNA_209|Name=jgi.p|Trimin1|157299|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1224bp|location=Sequence derived from alignment at Contig_3:725404..726627+ (Tribonema minus UTEX_B_3156 )back to top |