mRNA_2055 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|78907
Unique NamemRNA_2055
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|78907 vs. uniprot
Match: A0A835YRX2_9STRA (Chaperonin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX2_9STRA)

HSP 1 Score: 1130 bits (2924), Expect = 0.000e+0
Identity = 605/605 (100.00%), Postives = 605/605 (100.00%), Query Frame = 1
Query:   10 MPSTRTVIAGVAAIAGTTQAFAPVASHQQAVGAGTSTWTQCRAPSCSAGTRRRRATVSMAAKKVSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTSTLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGISDLNSIATIASGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGLTIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIAIATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVNKRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMTYLQRMDERIMAECANEDERIGAGILLKSLSAPCMQIAANAGVEGGVVWEKTRNQEFGFGYNAANGRYGDLLEMGVIDPAKVTINAIENSASVAALVLTTEALITEIPVKLSPAEEQAQYDAMGGGNYM 1824
            MPSTRTVIAGVAAIAGTTQAFAPVASHQQAVGAGTSTWTQCRAPSCSAGTRRRRATVSMAAKKVSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTSTLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGISDLNSIATIASGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGLTIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIAIATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVNKRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMTYLQRMDERIMAECANEDERIGAGILLKSLSAPCMQIAANAGVEGGVVWEKTRNQEFGFGYNAANGRYGDLLEMGVIDPAKVTINAIENSASVAALVLTTEALITEIPVKLSPAEEQAQYDAMGGGNYM
Sbjct:    1 MPSTRTVIAGVAAIAGTTQAFAPVASHQQAVGAGTSTWTQCRAPSCSAGTRRRRATVSMAAKKVSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTSTLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGISDLNSIATIASGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGLTIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIAIATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVNKRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMTYLQRMDERIMAECANEDERIGAGILLKSLSAPCMQIAANAGVEGGVVWEKTRNQEFGFGYNAANGRYGDLLEMGVIDPAKVTINAIENSASVAALVLTTEALITEIPVKLSPAEEQAQYDAMGGGNYM 605          
BLAST of jgi.p|Trimin1|78907 vs. uniprot
Match: H6WB82_VAULI (Chaperonin n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB82_VAULI)

HSP 1 Score: 894 bits (2310), Expect = 0.000e+0
Identity = 468/547 (85.56%), Postives = 505/547 (92.32%), Query Frame = 1
Query:  184 MAAKKVSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTSTLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGISDLNSIATIASGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGLTIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIAIATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVNKRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMTYLQRMDERIMAECANEDERIGAGILLKSLSAPCMQIAANAGVEGGVVWEKTRNQEFGFGYNAANGRYGDLLEMGVIDPAKVTINAIENSASVAALVLTTEALITEIPVKLSPAEEQAQYDAMGGGNYM 1824
            MAAKKVSFGE+SRKKLV+GINQVANAV+VTLGPKGRNVVLERNYGAPEIVNDGVTIARDISL DPE NVGARLVQEVAQKSDNRAGDGTTT+T+MTQ+IVNNGLR+VTSGANPVE+RRGI  ASE L+ +IK L+KPV+GI DLNS+ATIASGS+VMGSIISQAFEKVGE GSTVVEESQTL DEVDFTEGLTI+RGYLSPYFV D+ERQVCEM KP+ILVTD+KIDQVNELIP+LE+MVKSKEPLFIVAEDV GEALSALVVNKMRGVLDVCAI+APSFGDRRKAYLQDIAIATGATY+AEEVG++LDQV  DMLGTC RLV  +E TTIVTDG+Q EAV KRI AI++EK  TDNQFD EKC+ERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACM YLQR  +++ + CANEDE +GAGIL KSLSAPC QIA NAGVEGGVVWEKTRN EFGFGYNAA   YGDL EMGVIDPAKVTINAIENSASVA+LVLTTEALITEIPVKL+P +EQ QYD MGGGNYM
Sbjct:   40 MAAKKVSFGEESRKKLVEGINQVANAVRVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLEDPEHNVGARLVQEVAQKSDNRAGDGTTTATVMTQAIVNNGLRSVTSGANPVELRRGIKIASEFLIKQIKELSKPVNGIKDLNSVATIASGSAVMGSIISQAFEKVGETGSTVVEESQTLTDEVDFTEGLTIERGYLSPYFVGDKERQVCEMLKPKILVTDRKIDQVNELIPLLESMVKSKEPLFIVAEDVTGEALSALVVNKMRGVLDVCAIKAPSFGDRRKAYLQDIAIATGATYVAEEVGISLDQVTDDMLGTCARLVVSKEGTTIVTDGAQAEAVAKRIEAIRKEKSSTDNQFDQEKCDERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMVYLQRYQDKVCSLCANEDEVLGAGILFKSLSAPCKQIAYNAGVEGGVVWEKTRNMEFGFGYNAAKDEYGDLFEMGVIDPAKVTINAIENSASVASLVLTTEALITEIPVKLTPQQEQEQYDEMGGGNYM 586          
BLAST of jgi.p|Trimin1|78907 vs. uniprot
Match: A0A835YQ66_9STRA (Chaperonin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ66_9STRA)

HSP 1 Score: 813 bits (2099), Expect = 1.300e-290
Identity = 427/544 (78.49%), Postives = 480/544 (88.24%), Query Frame = 1
Query:  199 VSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTSTLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGISDLNSIATIASGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGLTIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIAIATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVNKRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMTYLQR-MDERIMAECANEDERIGAGILLKSLSAPCMQIAANAGVEGGVVWEKTRNQEFGFGYNAANGRYGDLLEMGVIDPAKVTINAIENSASVAALVLTTEALITEIPVK-LSPAEEQAQYDAMGGGNYM 1824
            VSFGE SR++LVDGINQVA+AV+VTLGP+GRNVVLER YGAPEIVNDGVTIARDISL DPE+NVGA+LVQEVAQKSDNRAGDGTTTSTLMTQ IVN GLR VTSGANPVEVRRGIMKA+E++V EIKALAKPVSGISDLNSIATIASGS  MG+IISQAFEK+GENGST+VEESQTL DEV+FTEGLTI RG+LSPYFVND ERQVCE+  PR+LVTD+K+D VNEL+P+LE MV+ K+PL IVAEDV GEALSALV+NKMRGVLDVCAI+AP+FGDR +AYLQDIAIATGATYIA+EVGLTLDQV  DMLG+CERLV  +E T I TDG    AV +RIA+IK+E++ TD++FD EKC ERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSA EMGIVPGGGACM+YL   M+  ++  C NED+  GA ILL+S+ APC QIA NAGVEGGVVW KT+ +EFG+GYNAA G YGDL  MGVIDPAKVTINA+ENSASVA+LVLTTEALITE+P K L+  +E A+YD  GGG YM
Sbjct:    9 VSFGEHSRRQLVDGINQVADAVRVTLGPRGRNVVLERAYGAPEIVNDGVTIARDISLPDPEQNVGAKLVQEVAQKSDNRAGDGTTTSTLMTQQIVNYGLRVVTSGANPVEVRRGIMKAAELMVEEIKALAKPVSGISDLNSIATIASGSEEMGAIISQAFEKIGENGSTMVEESQTLQDEVEFTEGLTIPRGFLSPYFVNDPERQVCELMAPRVLVTDRKLDSVNELVPLLEGMVQRKQPLLIVAEDVVGEALSALVMNKMRGVLDVCAIKAPAFGDRCRAYLQDIAIATGATYIADEVGLTLDQVRPDMLGSCERLVVSKEKTVITTDGKHAPAVARRIASIKKERDTTDSEFDAEKCTERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSAQEMGIVPGGGACMSYLSHTMEATVVEACENEDQVAGARILLRSMGAPCQQIAYNAGVEGGVVWAKTKTREFGYGYNAATGEYGDLFAMGVIDPAKVTINALENSASVASLVLTTEALITEVPEKPLTAEQEAARYDVQGGGEYM 552          
BLAST of jgi.p|Trimin1|78907 vs. uniprot
Match: D7FM88_ECTSI (Chaperonin cpn60 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM88_ECTSI)

HSP 1 Score: 781 bits (2018), Expect = 3.160e-277
Identity = 414/559 (74.06%), Postives = 477/559 (85.33%), Query Frame = 1
Query:  151 AGTRRRRAT-VSMAAKKVSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTSTLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGISDLNSIATIASGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGLTIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIAIATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVNKRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMTYLQRMDERIMAECANEDERIGAGILLKSLSAPCMQIAANAGVEGGVVWEKTRNQEFGFGYNAANGRYGDLLEMGVIDPAKVTINAIENSASVAALVLTTEALITEIPVKLSPAEEQAQYDAMGGGNYM 1824
            AG R R  T +SM AK V FGED+RKKL DGIN VA+AVKVTLGPKGRNVVLER YGAPEIVNDGVTIARDI + + EENVG +LVQEVAQKSDNRAGDGTTTSTL+TQ IVN G+R VTSGANPVE+R+GI+ AS M++ EIK LA PV    DL ++ATIASGSS MG II++AFE+VG+ GSTVVEESQTL DEV+FTEGLTIDRGYLSPYF++DQER +CE + P+ILVTDKKIDQVN+LIP+LE MV++KEPL I+AEDV GEALSALVVNKMRGVLDV A++APSFG+RRK YLQDIAIATG+TY+AEEVGLTLDQV ++MLGT +R+V  +E TTIV+DG   EAV  RI  I+++ E +D+ FD EK +ER+AALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALE+GIVPGGGAC+ YLQRMDE   A    ED + G GIL++SLSAP MQIA NAGVEGG+V  K  N+E+GFGYNAAN  Y DLLE GV+DPAKVTINA+ENSASVA+LVLTTE LI EIPVK+S A++QA YDAMGGG+YM
Sbjct:   62 AGRRSRAGTALSMGAKSVVFGEDARKKLADGINAVADAVKVTLGPKGRNVVLERAYGAPEIVNDGVTIARDIEVENHEENVGVKLVQEVAQKSDNRAGDGTTTSTLLTQEIVNQGMRLVTSGANPVELRQGILAASGMIIEEIKKLAVPVGKNEDLLNVATIASGSSTMGGIIAKAFERVGDTGSTVVEESQTLGDEVEFTEGLTIDRGYLSPYFISDQERSLCEFKNPKILVTDKKIDQVNDLIPLLEAMVQAKEPLLIMAEDVVGEALSALVVNKMRGVLDVVAVKAPSFGERRKNYLQDIAIATGSTYVAEEVGLTLDQVKIEMLGTADRIVVMKEQTTIVSDGRNDEAVKARIKTIRKDAETSDSAFDKEKADERVAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALELGIVPGGGACLQYLQRMDEEFRARVEGEDRKAGVGILMRSLSAPMMQIAKNAGVEGGIVVAKCDNKEWGFGYNAANSEYCDLLEAGVLDPAKVTINAVENSASVASLVLTTECLIAEIPVKVSEAQQQANYDAMGGGDYM 620          
BLAST of jgi.p|Trimin1|78907 vs. uniprot
Match: A0A7S3XV77_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV77_HETAK)

HSP 1 Score: 753 bits (1944), Expect = 1.970e-266
Identity = 401/575 (69.74%), Postives = 479/575 (83.30%), Query Frame = 1
Query:  112 TSTWTQCRAPSCSAGTRRRRATVSMAAKKVSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTSTLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGISDLNSIATIA-SGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGLTIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIAIATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVNKRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMTYLQRMDERIMAECANEDERIGAGILLKSLSAPCMQIAANAGVEGGVVWEKTRNQEFGFGYNAANGRYGDLLEMGVIDPAKVTINAIENSASVAALVLTTEALITEIPVKLSPAEEQAQYD---AMGGGNYM 1824
            TS +T  R  S   G+R   A+ ++ AKKVSF EDSR+ LV GIN+VANAVKVTLGPKGRNVVLERNYG PEIVNDGVTIARDI L DPEENVGA+L+QEVA KSD  AGDGTTTSTLMTQ +VN G++AVTSGANPV +RRG+M A+  LVA+IK LAKP++G++D+ ++A +A SG++ MG+IIS+AFEKVG+ GST +EESQTL+DEV+FTEGLTIDRGYLSPYFV DQERQ+CEM   +ILVTDK I+ V ++IP+LE MVKSKEPLFI+AEDV GEAL ALVVNKMRGVL+VCAI+AP FGDRRK YLQDIAIATGATYIA+EVGLTLDQ  ++MLGT ER+V ++E  T+VTDG Q EAV+KRIAAI++E E TDNQFD EK EER+AALGGGIARIKVGAATETELKDKKLRYEDA+NSV+SA++ GI PGGG+  TYL R  +  +A   +EDE +GA I+ KSL A  +Q+AANAG+EG VV+EK R++++GFGYNAAN +Y DL E GVID AKV IN +EN+ SVA+LVLTTEALITEIPVK++  + QAQ D    MGG +YM
Sbjct:   21 TSAFTPARTNSVKLGSR---ASTALDAKKVSFKEDSREALVKGINKVANAVKVTLGPKGRNVVLERNYGVPEIVNDGVTIARDIDLDDPEENVGAKLIQEVASKSDKSAGDGTTTSTLMTQELVNQGMKAVTSGANPVALRRGMMAATNFLVAKIKELAKPINGVADIENVAIVATSGATAMGAIISKAFEKVGDTGSTSIEESQTLIDEVEFTEGLTIDRGYLSPYFVTDQERQICEMENMKILVTDKTIETVQDIIPLLEGMVKSKEPLFIIAEDVKGEALQALVVNKMRGVLNVCAIKAPGFGDRRKNYLQDIAIATGATYIADEVGLTLDQATVEMLGTAERIVVEKEACTMVTDGKQAEAVSKRIAAIRREAENTDNQFDKEKAEERVAALGGGIARIKVGAATETELKDKKLRYEDAINSVKSAMKFGITPGGGSTYTYLTRFRDEFLATVVDEDESLGADIVFKSLPAVTIQVAANAGMEGTVVYEKIRDKDYGFGYNAANNQYCDLFEAGVIDSAKVAINGLENAVSVASLVLTTEALITEIPVKMTLEDIQAQNDRMAGMGGQDYM 592          
BLAST of jgi.p|Trimin1|78907 vs. uniprot
Match: A0A7S3V7N8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7N8_9STRA)

HSP 1 Score: 752 bits (1941), Expect = 4.210e-266
Identity = 401/557 (71.99%), Postives = 464/557 (83.30%), Query Frame = 1
Query:  169 RATVSMAAKKVSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTSTLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGISDLNSIATIASGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGLTIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIAIATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVNKRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMTYLQR-MDERIMAECANEDERIGAGILLKSLSAPCMQIAANAGVEGGVVWEKTR----NQEFGFGYNAANGRYGDLLEMGVIDPAKVTINAIENSASVAALVLTTEALITEIPVKLSPAEEQAQYDAMGGGNYM 1824
            R + ++ AK+VSF EDSR KLV GINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIAR+ISL DPEENVGARL+QEVA KSD++AGDGTTTST+MTQ+IVNNG+RAVT+G NPV +  GI KA  ++  E+K +AKPV+G  DL ++ATIASGS  MG II+QAF+KVGENGSTV+EESQTL DE++FTEGLTIDRG++SPY V DQERQ+ E+  PRILVTD KID VNE++P+LE +VKSKEP+FIVAEDV GEALSALVVNKMRGVLDV AI+AP FG RRK YLQDIAIATGATY+AEEVG+TLD V +DMLGT ER+V  +ELTTIVTDG Q EA++ RIA I+ E E  D  FD EK  ERIAALGGGIARIKVGAATETELKDKKLRYEDALNSV SA E+GIVPGGGAC+ YLQ  M E+IMA   N+DER+GAGIL+KSLS PCMQ+A NAG+EG VV  K +     + FG G++A    Y +L + GVIDPAKVTINAIENSASVA LVLTTE L+TEIP ++S AE+QA +DA G G+ M
Sbjct:   26 RTSTALDAKRVSFKEDSRSKLVSGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIAREISLRDPEENVGARLIQEVASKSDSKAGDGTTTSTIMTQAIVNNGIRAVTAGTNPVALNTGIKKAGRLVAEELKRIAKPVTGTEDLKNVATIASGSIEMGRIIAQAFDKVGENGSTVIEESQTLFDEIEFTEGLTIDRGFVSPYLVKDQERQISELTGPRILVTDAKIDNVNEVVPLLEQLVKSKEPIFIVAEDVTGEALSALVVNKMRGVLDVVAIKAPGFGMRRKEYLQDIAIATGATYVAEEVGITLDSVTLDMLGTAERIVCGKELTTIVTDGQQEEAIDARIAQIRMEAENADTDFDKEKATERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVDSARELGIVPGGGACLAYLQTTMVEQIMAAMDNDDERVGAGILIKSLSHPCMQVAENAGIEGAVVLAKVQAIATEKGFGHGWDAGKMEYCNLYDRGVIDPAKVTINAIENSASVAGLVLTTECLVTEIPYEMSEAEKQALFDAQGMGSGM 582          
BLAST of jgi.p|Trimin1|78907 vs. uniprot
Match: B8C4T7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4T7_THAPS)

HSP 1 Score: 738 bits (1906), Expect = 1.070e-260
Identity = 392/556 (70.50%), Postives = 465/556 (83.63%), Query Frame = 1
Query:  163 RRRATVSMAAKKVSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTSTLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGISDLNSIATIASGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGLTIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIAIATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVNKRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMTYLQ-RMDERIMAECANEDERIGAGILLKSLSAPCMQIAANAGVEGGVVWEK----TRNQEFGFGYNAANGRYGDLLEMGVIDPAKVTINAIENSASVAALVLTTEALITEIPVKLSPAEEQAQYDAMGGG 1815
            RR ++ +++AK+VSF E+SRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIAR+ISLADPE NVG RLVQEVA KSD++AGDGTTTST+MTQ+IVNNG++AVTSG NP+ +  GI K++ M+ A+IK L++ ++G+ DL S+ATIASGS  MG II+QAF+KVGENGSTV+EESQTL DE++FTEGLTIDRGY+SPYFV DQERQV E+  PRILVTD KID VNE++P+LE +VK+KEP+ ++AEDV G+ALSALVVNKMRGVLDV AIRAP FG RRKAYLQDIAIATGATY+AEEVG+TLD V  DMLGT +R V  +ELTTIVTDG Q +AV  RIA IK+E E  D  FD +K +ER+AALGGGIARIKVGAATETELKDKKLRYEDALNSV+SA E+GIVPGGGAC+ Y+Q +  + I+A   +ED+R GA IL+KSLS PC Q+A NAGVEG VV  K    TR + FG G++A+   Y DL+E GV+DPAKVTINA+ENSASVA LVLTTE L+TEIPV  S  + Q ++DA G G
Sbjct:   31 RRLSSTALSAKRVSFKEESRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIAREISLADPECNVGVRLVQEVASKSDSKAGDGTTTSTIMTQAIVNNGMKAVTSGVNPIALNAGIKKSAGMVAAKIKELSQKINGVEDLQSVATIASGSVDMGRIIAQAFDKVGENGSTVIEESQTLFDEIEFTEGLTIDRGYISPYFVKDQERQVAELVNPRILVTDAKIDNVNEIVPLLEQLVKTKEPVLMIAEDVTGDALSALVVNKMRGVLDVVAIRAPGFGQRRKAYLQDIAIATGATYVAEEVGITLDSVTTDMLGTADRCVIAKELTTIVTDGKQEDAVIARIAQIKREGEEADTDFDRDKAQERVAALGGGIARIKVGAATETELKDKKLRYEDALNSVQSARELGIVPGGGACLAYIQDQFTDEILAAFDDEDQRAGAAILMKSLSEPCCQVAENAGVEGAVVLSKIVELTREKGFGHGWDASKNNYCDLMEAGVVDPAKVTINAVENSASVAGLVLTTECLVTEIPVFESEEDMQRRFDAEGMG 586          
BLAST of jgi.p|Trimin1|78907 vs. uniprot
Match: A0A6V2A4W8_9STRA (Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6V2A4W8_9STRA)

HSP 1 Score: 734 bits (1896), Expect = 4.380e-259
Identity = 389/554 (70.22%), Postives = 461/554 (83.21%), Query Frame = 1
Query:  169 RATVSMAAKKVSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTSTLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGISDLNSIATIASGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGLTIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIAIATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVNKRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMTYLQ-RMDERIMAECANEDERIGAGILLKSLSAPCMQIAANAGVEGGVVWEKT----RNQEFGFGYNAANGRYGDLLEMGVIDPAKVTINAIENSASVAALVLTTEALITEIPVKLSPAEEQAQYDAMGGG 1815
            R +VS+ AKKVSF E+SRK+LV+GIN VANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIAR+ISL DPE+NVGA+L+QEVA KSD++AGDGTTTST+MTQ+I NNG+RAVTSG NPV +  GI KA+ M+  E++ LA+PV+GI DL ++ATIASGS+ MG II+QAF+KVG+ GST VEESQTLVDE++FTEGLTI+RG++SPY V DQERQV EM+ PR+LVTD KID VN+L+P+LE +VKSKEP+ I+AEDV GEALSALVVNKMRGVLDV AIRAP FG RRK YLQDIAIATGATY+AEEVG+TLD V +DMLGT +R+V  +ELTTIVTDG Q EA+  RIA I++E E  D  FD +K  ER+A+LGGGIARIKVGAATETELKDKKLRYEDALNSV SA E+GIVPGGGAC+ Y+Q  M + I+    N+DER GA IL+KSLS PC Q+A NAG+EG VV  K     R++ FG G++AA   Y +LLE GVIDPAKVTINA+ENSASVA LVLTTE L+TEIPV  +   +QA++DA G G
Sbjct:   35 RTSVSLDAKKVSFREESRKRLVEGINAVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIAREISLRDPEQNVGAKLIQEVASKSDSKAGDGTTTSTIMTQAITNNGMRAVTSGVNPVALNIGIRKAARMVTDEVEKLAQPVTGIEDLKNVATIASGSAEMGRIIAQAFDKVGDTGSTTVEESQTLVDEIEFTEGLTIERGFVSPYLVKDQERQVAEMQNPRVLVTDAKIDNVNDLVPLLEQLVKSKEPILIIAEDVTGEALSALVVNKMRGVLDVVAIRAPGFGMRRKEYLQDIAIATGATYVAEEVGITLDSVTLDMLGTADRVVVAKELTTIVTDGKQAEAIEARIAQIRKEAENADTDFDRDKAVERVASLGGGIARIKVGAATETELKDKKLRYEDALNSVDSARELGIVPGGGACLAYIQDTMTDAILEAMDNDDERTGAAILMKSLSEPCQQVAVNAGIEGAVVLSKVQQMCRDKGFGHGWDAAKMEYCNLLERGVIDPAKVTINAVENSASVAGLVLTTECLVTEIPVYETEEMKQARFDAEGMG 588          
BLAST of jgi.p|Trimin1|78907 vs. uniprot
Match: A0A7S2K8S6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8S6_9STRA)

HSP 1 Score: 729 bits (1883), Expect = 2.310e-257
Identity = 391/551 (70.96%), Postives = 458/551 (83.12%), Query Frame = 1
Query:  172 ATVSMAAKKVSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTSTLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGISDLNSIATIASGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGLTIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIAIATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVNKRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMTYLQR-MDERIMAECANEDERIGAGILLKSLSAPCMQIAANAGVEGGVVWEKTRN----QEFGFGYNAANGRYGDLLEMGVIDPAKVTINAIENSASVAALVLTTEALITEIPVKLSPAEEQAQYDAMG 1809
            A+  + AK VSF EDSRKKLV GIN+VA+AV+VTLGPKGRNVVLERNYGAPEIVNDGVTIAR+ISL DPEENVGARLVQEVA KSD++AGDGTTTST+M Q++VN G+RAVTSG +PV +  G+ KA+ +L  E+K  A+PV+G  DL  +ATIASGS  MG II+ AF+K+GE GSTVVEESQTLVDEV+FTEGLTIDRGY+SPY V DQERQV EM  PR+LVTD KID VNE+IP+LE +VK KEP+FIVA+DV GEALSALVVNKMRGVLDV AIRAP FG RRK YLQDIAIATGAT IAEEVG+TLD V +DMLG+ ER+V Q+ELTTIVTDG Q EA++ RI  I++E E  D  FD +K +ER+AALGGGIARIKVGAATETELKDKKLRYEDALNSV+SA E+GIVPGGGAC+ +LQ  M ++++A C NEDE  GA I++K++S PCMQ+A NAG+EG VV  K ++    + FG G+NAAN  Y DL E GVIDPAKVTINA+ENSASVA LVLTTEAL+TEIPV LS  ++Q Q+D MG
Sbjct:   23 ASTKLDAKLVSFEEDSRKKLVAGINKVADAVRVTLGPKGRNVVLERNYGAPEIVNDGVTIAREISLKDPEENVGARLVQEVASKSDSKAGDGTTTSTIMVQALVNLGMRAVTSGVSPVGLNLGMRKAARVLADEVKERARPVTGTDDLKDVATIASGSIEMGRIIAAAFDKIGETGSTVVEESQTLVDEVEFTEGLTIDRGYVSPYLVKDQERQVAEMVTPRVLVTDAKIDNVNEVIPLLEKIVKLKEPVFIVADDVTGEALSALVVNKMRGVLDVVAIRAPGFGTRRKEYLQDIAIATGATLIAEEVGITLDSVTLDMLGSAERIVVQKELTTIVTDGKQAEAIDARIKQIRKEAESADTDFDRDKAKERVAALGGGIARIKVGAATETELKDKKLRYEDALNSVQSARELGIVPGGGACLAHLQDIMMDKVLAVCDNEDEIQGAQIMMKAISFPCMQVAINAGIEGAVVLSKVQSLAKEKGFGHGWNAANSEYCDLFEAGVIDPAKVTINALENSASVAGLVLTTEALVTEIPVVLSEKDKQDQFDQMG 573          
BLAST of jgi.p|Trimin1|78907 vs. uniprot
Match: A0A7S2EK38_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EK38_TRICV)

HSP 1 Score: 723 bits (1866), Expect = 1.090e-254
Identity = 386/561 (68.81%), Postives = 459/561 (81.82%), Query Frame = 1
Query:  148 SAGTRRRRATVSMAAKKVSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLERNYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTSTLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGISDLNSIATIASGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGLTIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKSKEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIAIATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVNKRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGGACMTYLQ-RMDERIMAECANEDERIGAGILLKSLSAPCMQIAANAGVEGGVVWEKTR----NQEFGFGYNAANGRYGDLLEMGVIDPAKVTINAIENSASVAALVLTTEALITEIPVKLSPAEEQAQYDAMGGG 1815
            SA T  R+ T S+ AKKVSF EDSRK LVDGIN VA+AV+VTLGPKGRNVVLERNYGAPEIVNDGVTIAR+ISL DPE+N GARL+QEVA KSD++AGDGTTTST+MTQ+IVNNG+RAVTSG NPV +  GI KA+ ++  ++K +A  + G  DL ++ATIASGS  MG II+QA +KVGE GSTV+EESQTLVDEV+FTEGLTIDRGY+SPY V DQERQV EM  PR+LVTD KI+ VNE++P+LE +VK+KEP+FIVAEDV GEALSALVVNKMRGVLDV AI+AP FG RRK YLQDIAIATGATY+AEEVG+TLD + +DMLGT ER+V  +E TTIVTDG Q EA+  RI+ I+++ E  D  FD EK  ER+AALGGGIARIKVGAATETELKDKKLRYEDALNSV+SA E+GIVPGGGAC+ +LQ  + E I+A    +DE  GA IL+ ++SAPCMQ+A NAG+EG VV  K +     + FG+G++AA G Y +L+E GVIDPAKVTINAIENSASVA LVLTTE L+TEIP +L+  ++Q  +DA G G
Sbjct:   21 SAPTFARQTTTSLDAKKVSFKEDSRKALVDGINAVADAVRVTLGPKGRNVVLERNYGAPEIVNDGVTIAREISLRDPEKNTGARLIQEVASKSDSKAGDGTTTSTIMTQAIVNNGIRAVTSGVNPVALNLGIKKAARIVADKVKEVAVDIKGTEDLRNVATIASGSVDMGRIIAQAADKVGETGSTVIEESQTLVDEVEFTEGLTIDRGYISPYLVKDQERQVAEMMSPRVLVTDAKIENVNEVVPLLEQLVKTKEPIFIVAEDVTGEALSALVVNKMRGVLDVVAIKAPGFGMRRKEYLQDIAIATGATYVAEEVGITLDSITLDMLGTAERIVVAKEQTTIVTDGQQQEAIEARISQIRKQAESADTDFDREKAVERVAALGGGIARIKVGAATETELKDKKLRYEDALNSVQSARELGIVPGGGACLAHLQDTLAEEILAAMDGKDEEAGAQILINAMSAPCMQVAENAGIEGAVVLAKVQALCEEKGFGYGWDAAKGEYCNLMERGVIDPAKVTINAIENSASVAGLVLTTECLVTEIPQELTEEQKQQMFDAGGMG 581          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|78907 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRX2_9STRA0.000e+0100.00Chaperonin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
H6WB82_VAULI0.000e+085.56Chaperonin n=1 Tax=Vaucheria litorea TaxID=109269 ... [more]
A0A835YQ66_9STRA1.300e-29078.49Chaperonin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
D7FM88_ECTSI3.160e-27774.06Chaperonin cpn60 n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A7S3XV77_HETAK1.970e-26669.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3V7N8_9STRA4.210e-26671.99Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B8C4T7_THAPS1.070e-26070.50Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A6V2A4W8_9STRA4.380e-25970.22Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID... [more]
A0A7S2K8S6_9STRA2.310e-25770.96Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2EK38_TRICV1.090e-25468.81Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_6contigContig_6:164710..169290 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|78907|CE78906_288
BRITEko00000,ko00001,ko03019,ko03029,ko03110,ko04147
KEGG Pathwayko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152
KEGG koko:K04077
GOsGO:0000003,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005840,GO:0006457,GO:0006458,GO:0006996,GO:0007005,GO:0007275,GO:0008150,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009657,GO:0009658,GO:0009790,GO:0009791,GO:0009793,GO:0009941,GO:0009987,GO:0010154,GO:0016020,GO:0016043,GO:0022414,GO:0022626,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032991,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044183,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048046,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0051082,GO:0061077,GO:0061458,GO:0071840,GO:1990904
Preferred nameCPN60A
Descriptionprotein refolding
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0459@1|root,KOG0356@2759|Eukaryota
Evalue3.56e-279
Seed ortholog2880.D7FM88
Hectar predicted targeting categorychloroplast
TranscriptId79229
TrackFilteredModels1
ProteinId78907
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|78907gene_2055Tribonema minus UTEX_B_3156 geneContig_6 164710..169290 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|78907Trimin1|78907|CE78906_288Tribonema minus UTEX_B_3156 polypeptideContig_6 164719..169111 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2055_1exon_2055_1Tribonema minus UTEX_B_3156 exonContig_6 164710..164907 +
exon_2055_2exon_2055_2Tribonema minus UTEX_B_3156 exonContig_6 165049..165284 +
exon_2055_3exon_2055_3Tribonema minus UTEX_B_3156 exonContig_6 165642..165879 +
exon_2055_4exon_2055_4Tribonema minus UTEX_B_3156 exonContig_6 166359..166499 +
exon_2055_5exon_2055_5Tribonema minus UTEX_B_3156 exonContig_6 167272..167571 +
exon_2055_6exon_2055_6Tribonema minus UTEX_B_3156 exonContig_6 167874..168080 +
exon_2055_7exon_2055_7Tribonema minus UTEX_B_3156 exonContig_6 168605..169290 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_2055UTR5_2055Tribonema minus UTEX_B_3156 five_prime_UTRContig_6 164710..164718 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2055CDS_2055Tribonema minus UTEX_B_3156 CDSContig_6 164719..164907 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_2055UTR3_2055Tribonema minus UTEX_B_3156 three_prime_UTRContig_6 169112..169290 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2055 ID=mRNA_2055|Name=jgi.p|Trimin1|78907|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2006bp|location=Sequence derived from alignment at Contig_6:164710..169290+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GACAGGAGCATGCCGAGCACCCGCACGGTAATCGCTGGAGTTGCCGCCAT
TGCGGGCACGACGCAGGCCTTTGCGCCCGTCGCCTCGCACCAGCAGGCCG
TAGGTGCTGGCACCTCAACATGGACTCAATGCAGGGCACCAAGCTGCAGT
GCCGGCACTCGCCGGCGGCGCGCCACGGTGTCCATGGCTGCCAAGAAGGT
GTCGTTCGGCGAGGACTCCCGTAAGAAGCTCGTTGACGGCATCAACCAGG
TCGCCAATGCCGTCAAGGTGACGCTGGGGCCCAAGGGCCGCAATGTTGTT
CTAGAGCGCAACTACGGAGCGCCAGAAATCGTCAACGACGGTGTCACCAT
TGCACGAGACATCTCTCTGGCGGACCCAGAAGAGAATGTGGGAGCGCGGC
TGGTGCAGGAGGTTGCACAGAAGTCTGACAACAGGGCCGGCGACGGCACA
ACCACTTCTACCCTTATGACGCAGTCCATCGTAAACAACGGCCTGCGCGC
TGTGACGAGCGGCGCCAATCCTGTTGAGGTCAGGCGCGGCATCATGAAGG
CGAGCGAGATGCTGGTGGCTGAGATCAAGGCGCTGGCTAAGCCAGTCAGT
GGCATCAGTGACCTCAACAGCATCGCCACCATTGCAAGTGGCAGTTCTGT
CATGGGCAGCATCATCTCGCAGGCCTTTGAGAAGGTTGGGGAGAACGGCA
GCACGGTTGTGGAGGAGTCTCAAACACTGGTGGATGAGGTGGACTTTACT
GAGGGACTCACGATCGACCGCGGGTACCTGAGCCCATACTTTGTGAACGA
CCAGGAGCGCCAGGTGTGCGAGATGCGCAAGCCGCGCATCCTTGTCACCG
ACAAGAAGATTGACCAGGTCAATGAGCTCATCCCTATCCTGGAGACAATG
GTAAAGTCCAAGGAGCCCCTGTTCATCGTTGCAGAGGACGTGGCGGGAGA
GGCCCTGAGCGCACTGGTCGTGAACAAGATGCGCGGGGTCCTTGACGTGT
GCGCGATCCGCGCGCCGTCATTCGGCGACAGGCGGAAGGCGTACCTTCAG
GACATTGCCATTGCCACCGGCGCCACCTACATTGCGGAGGAGGTTGGCCT
CACCCTTGACCAGGTGAACATGGACATGCTGGGCACGTGCGAGCGGCTGG
TGGCGCAGCGCGAGCTCACCACCATTGTCACGGACGGCAGCCAGATGGAG
GCTGTCAACAAGCGCATTGCCGCCATCAAGCAGGAGAAGGAGGGCACCGA
CAACCAGTTTGACATTGAGAAGTGCGAGGAGCGCATTGCGGCGCTGGGCG
GCGGCATTGCGCGCATCAAGGTCGGCGCGGCGACGGAGACGGAGCTGAAG
GACAAGAAGCTGCGCTACGAGGACGCGCTCAACTCTGTGCGCTCCGCGCT
GGAGATGGGGATCGTGCCGGGCGGCGGCGCGTGCATGACGTACCTGCAGC
GCATGGACGAGCGCATCATGGCGGAGTGCGCCAACGAGGACGAGAGGATC
GGCGCGGGGATCCTGCTCAAGTCGCTGAGCGCGCCGTGCATGCAGATTGC
GGCGAACGCGGGGGTGGAGGGGGGCGTCGTCTGGGAGAAGACGCGCAACC
AGGAGTTTGGCTTTGGCTACAACGCCGCCAACGGGCGCTACGGCGACCTG
CTGGAGATGGGCGTCATCGACCCCGCAAAGGTGACCATCAATGCCATTGA
GAACAGCGCGAGTGTGGCGGCGCTGGTGCTCACAACGGAGGCGCTCATTA
CGGAGATTCCCGTGAAGCTGTCGCCCGCAGAGGAGCAGGCGCAGTACGAC
GCCATGGGCGGCGGCAACTACATGTAAGCCGCTGCGCTGCGCTGCTGCTG
CTGCTGCTGCGCGCTGCTGCTGCTGCTGGCGTGGCTGTGGCGCTGCTTAG
CAGCAAGGCAGCATCGCTCATGCGCGGAGGCGGCATGCAGGCGGCTGCCG
CTGCGGGCTCGAGCAAGCTACAAGTTGGCAATGTCGGCATCAGCCACCGC
TGCGCA
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protein sequence of jgi.p|Trimin1|78907

>Trimin1|78907|CE78906_288 ID=Trimin1|78907|CE78906_288|Name=jgi.p|Trimin1|78907|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=606bp
MPSTRTVIAGVAAIAGTTQAFAPVASHQQAVGAGTSTWTQCRAPSCSAGT
RRRRATVSMAAKKVSFGEDSRKKLVDGINQVANAVKVTLGPKGRNVVLER
NYGAPEIVNDGVTIARDISLADPEENVGARLVQEVAQKSDNRAGDGTTTS
TLMTQSIVNNGLRAVTSGANPVEVRRGIMKASEMLVAEIKALAKPVSGIS
DLNSIATIASGSSVMGSIISQAFEKVGENGSTVVEESQTLVDEVDFTEGL
TIDRGYLSPYFVNDQERQVCEMRKPRILVTDKKIDQVNELIPILETMVKS
KEPLFIVAEDVAGEALSALVVNKMRGVLDVCAIRAPSFGDRRKAYLQDIA
IATGATYIAEEVGLTLDQVNMDMLGTCERLVAQRELTTIVTDGSQMEAVN
KRIAAIKQEKEGTDNQFDIEKCEERIAALGGGIARIKVGAATETELKDKK
LRYEDALNSVRSALEMGIVPGGGACMTYLQRMDERIMAECANEDERIGAG
ILLKSLSAPCMQIAANAGVEGGVVWEKTRNQEFGFGYNAANGRYGDLLEM
GVIDPAKVTINAIENSASVAALVLTTEALITEIPVKLSPAEEQAQYDAMG
GGNYM*
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mRNA from alignment at Contig_6:164710..169290+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2055 ID=mRNA_2055|Name=jgi.p|Trimin1|78907|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4581bp|location=Sequence derived from alignment at Contig_6:164710..169290+ (Tribonema minus UTEX_B_3156 )
GACAGGAGCATGCCGAGCACCCGCACGGTAATCGCTGGAGTTGCCGCCAT TGCGGGCACGACGCAGGCCTTTGCGCCCGTCGCCTCGCACCAGCAGGCCG TAGGTGCTGGCACCTCAACATGGACTCAATGCAGGGCACCAAGCTGCAGT GCCGGCACTCGCCGGCGGCGCGCCACGGTGTCCATGGCTGCCAAGAAGGT GAGGCCGATGCAATGTTGAGTTTTAAGTGCGCTACTCTGCTCTGTTGTCG CCTGGCCAGCCAATCATGAGCGATTTGCTTACGTACAATCTTGTTGTGTG GCTCTCGCATCTCGATGGTGCTGTCTTGGCGACGCACAGGTGTCGTTCGG CGAGGACTCCCGTAAGAAGCTCGTTGACGGCATCAACCAGGTCGCCAATG CCGTCAAGGTGACGCTGGGGCCCAAGGGCCGCAATGTTGTTCTAGAGCGC AACTACGGAGCGCCAGAAATCGTCAACGACGGTGTCACCATTGCACGAGA CATCTCTCTGGCGGACCCAGAAGAGAATGTGGGAGCGCGGCTGGTGCAGG AGGTTGCACAGAAGTCTGACAACAGGTACGAACCTCATCAGCGTCTTACG TGTGCGGCTGCAATGATCGTGCGGCGTGCCGCGTGGTTGAACATGTGTCG AGTTCCACGCCACCTCCCGACTTCGCCGCTGATTGTGCGTGTCGTGTAAA CGTATGTGCTGCTGTGCACCGGCCAACGGGAGTTGCAAATCGCAGCTGCC GCACACGATTGGAGCTGGCACCGGCCGCCGTCATGTTTGGGGTCGGGCGT AACCGATCCCCGTCGTTCATGATTCGCAATTCACTGAAGGCTCCACCAGC GCTTCAGTTCTTTGCAGCTTGCAGCTGCACACCGCTATTGCGCACAACCT CTGACAGTCCTTCACTGCTCTTGCTGCGACAGGGCCGGCGACGGCACAAC CACTTCTACCCTTATGACGCAGTCCATCGTAAACAACGGCCTGCGCGCTG TGACGAGCGGCGCCAATCCTGTTGAGGTCAGGCGCGGCATCATGAAGGCG AGCGAGATGCTGGTGGCTGAGATCAAGGCGCTGGCTAAGCCAGTCAGTGG CATCAGTGACCTCAACAGCATCGCCACCATTGCAAGTGGCAGTTCTGTCA TGGGCAGCATCATCTCGCAGGTAAAGGCTTTGTGTATGTGTGTCTGCCTG CACTGTTGTGTTCACAAGCGCACGCATCTGCACTTGCACTGTTTTCTGAT GCTGTAGTGAGGAGGTCCAGCTGCCTCAACCGATTGACATCGCTGCCATT TGAATGGCGTTAGCAGCGGCATGGCAGCTTTGCATCCGTACAATTAGGCA GTCACTTGCATGATAGCAGACGGCGCTGTGATGTAAAGCTGCAACCAGCT TGTAGACACACGCATTCAGGGATCTACATATCGGCAGGTATAGGATTATA GTAAGAGTGCAGCAAAGTCTGGACTATGCTTGCATGCAGCAACCTGCATG CACCATCAGCCCTGCTTTGCAGCAGATGTCTGTCCGTGCAGAGCAGCCCT TGCTATCATCACACTACCACAATAACAAAATGGCATCCGACGGCGGCAAC CGACAACACTCACTGATGGGGTTGCATGTTTGCCGACCTACCTCCGCAGG CCTTTGAGAAGGTTGGGGAGAACGGCAGCACGGTTGTGGAGGAGTCTCAA ACACTGGTGGATGAGGTGGACTTTACTGAGGGACTCACGATCGACCGCGG GTACCTGAGCCCATACTTTGTGAACGACCAGGAGCGCCAGGTATGCATGT GTGCATACTGTTAGTCTAGTATGTGTGTTTGCAACACAATGCTTGGTGTT GCGAAATTGTTGCATGGCACAGCTCCACGGCTTCCGTAGACCCTGCAGTT GAGGGTCGATGGTGAGCATCAGCTGTTGTGTACAGCCATTGTACAGCTCT GGGTCTGCTGGGCTGCAGGACGGCCTAAGTTTGTCTTTGGCCAATGTGTT GCTTGCCCGCCTGGCACTTGCAGTCATTTCACCATGGAGCATCACTTGCA GAACTGCTCAGTGAATTGCTCAGCCCAATGTAGCGCCGGCGGCCCATAGC AAGCCATCACATTGACTTGTCAGTGAGTCGCACTTTGGATGCTCAGCAGG CTATCAGTAATACTCATACATGGCAGCGGCATAGTTCACCACGAGACATT GCATGCAAGAATTGGGCAAACAGCTGTGCCGGCTTTGTGACAGTGGTGGT GCACATGAACTTGAGTCGCTCAAGCAGCAGAGGTGGCTGCTCAAATGACA TGTTCTCAGCAAAGTGGCTGCAATGAATTTACTTCACCATTGTACGTAGG TCTGCATTCCGTTACTGATGTACTCATGTGACATCAGAGCACACCGTAAG GCCCCTATCGAATGTCTCGAGAGGGGTGCCGCTCTGGCCTGCATGCGCAC TGTGACGGTGCGCACTCACATTTCCAAGCCAGCACTGCAAGTGGCTTTCG TCAGGTACACCTGTGCTGAGCACTGCATCGCTGCACCCCCCCCCCCCCCC CCCCCACTGCAGGTGTGCGAGATGCGCAAGCCGCGCATCCTTGTCACCGA CAAGAAGATTGACCAGGTCAATGAGCTCATCCCTATCCTGGAGACAATGG TAAAGTCCAAGGAGCCCCTGTTCATCGTTGCAGAGGACGTGGCGGGAGAG GCCCTGAGCGCACTGGTCGTGAACAAGATGCGCGGGGTCCTTGACGTGTG CGCGATCCGCGCGCCGTCATTCGGCGACAGGCGGAAGGCGTACCTTCAGG ACATTGCCATTGCCACCGGCGCCACCTACATTGCGGAGGAGGTTGGCCTC ACCCTTGACCAGGTGAGCTAGGGTTACAGTATGTAGGGTTTGTTTGTGCC AATGGCACGAGGGCCACGCTGCATTCAATGTTATCGATGGTGTCTCTCTT GATGAGTGCTGAGTGCTGCCTCATCAGCAATGGCCATCAGTCGACGCTCC ATTCGTCATGAATGGTTCTGGGCCTGGTGTCTGGACTTGCAACAGCAAGT GGATGATGTGCATGATTGAGCGATGCCGCATCAGCAGCGACCACTATTCG ACGCTCGCCGGTTCCTTTCTGCACTCATCATCACCGCGCCTGGTGCCTGG GCTTGACGTGGCAGGTGAACATGGACATGCTGGGCACGTGCGAGCGGCTG GTGGCGCAGCGCGAGCTCACCACCATTGTCACGGACGGCAGCCAGATGGA GGCTGTCAACAAGCGCATTGCCGCCATCAAGCAGGAGAAGGAGGGCACCG ACAACCAGTTTGACATTGAGAAGTGCGAGGAGCGCATTGCGGCGCTGGGC GGCGGCATTGCGCGCATCAAGGTGAGTCTGAGTCTGACTCCAACTGCGCT ATTTGTGGGTCACAGGAAGCGCTTCTTCAACTTACCTTTTAAGTTGAGAT GGAACTGTGTGGGGGAAGCACATCGCTGTGTGCGGCGCATCAAGGTGAGT CTGAGTCTGACTCTAACCGCGCTGTTAGTCTGTTTCAGGAAGCGCTTTCT GCTACTGAATGATCCATTCGGAGCACGTGGCCCAGAGGTGGCAGTGTTGC TTGCAGCAAGGTGCGCAACTACACCGGGCATCGACATCATGTGTGGTGCC AAGGTTGCAGAGCAATGTTGCCAGGCCTGCGAGCTTAAAGGTTGACGTGG CACTGAAATGTACCAGATGCATAACCACTGTGAACTTCAAGTTTCACGGT GATTGAAGTTCAAGTTCACCACTTGCCCTGCAAGGACAGCGGACGCTGCG CATCAGCTGAGCCATGCACGGCATCCTACTGTCCTCACATCCAACTTCAA GTCCTTTATTCACTCAACTTCAACTTCAATCCCCTACTCCTACAGGTCGG CGCGGCGACGGAGACGGAGCTGAAGGACAAGAAGCTGCGCTACGAGGACG CGCTCAACTCTGTGCGCTCCGCGCTGGAGATGGGGATCGTGCCGGGCGGC GGCGCGTGCATGACGTACCTGCAGCGCATGGACGAGCGCATCATGGCGGA GTGCGCCAACGAGGACGAGAGGATCGGCGCGGGGATCCTGCTCAAGTCGC TGAGCGCGCCGTGCATGCAGATTGCGGCGAACGCGGGGGTGGAGGGGGGC GTCGTCTGGGAGAAGACGCGCAACCAGGAGTTTGGCTTTGGCTACAACGC CGCCAACGGGCGCTACGGCGACCTGCTGGAGATGGGCGTCATCGACCCCG CAAAGGTGACCATCAATGCCATTGAGAACAGCGCGAGTGTGGCGGCGCTG GTGCTCACAACGGAGGCGCTCATTACGGAGATTCCCGTGAAGCTGTCGCC CGCAGAGGAGCAGGCGCAGTACGACGCCATGGGCGGCGGCAACTACATGT AAGCCGCTGCGCTGCGCTGCTGCTGCTGCTGCTGCGCGCTGCTGCTGCTG CTGGCGTGGCTGTGGCGCTGCTTAGCAGCAAGGCAGCATCGCTCATGCGC GGAGGCGGCATGCAGGCGGCTGCCGCTGCGGGCTCGAGCAAGCTACAAGT TGGCAATGTCGGCATCAGCCACCGCTGCGCA
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Coding sequence (CDS) from alignment at Contig_6:164710..169290+

>mRNA_2055 ID=mRNA_2055|Name=jgi.p|Trimin1|78907|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1818bp|location=Sequence derived from alignment at Contig_6:164710..169290+ (Tribonema minus UTEX_B_3156 )
ATGCCGAGCACCCGCACGGTAATCGCTGGAGTTGCCGCCATTGCGGGCAC
GACGCAGGCCTTTGCGCCCGTCGCCTCGCACCAGCAGGCCGTAGGTGCTG
GCACCTCAACATGGACTCAATGCAGGGCACCAAGCTGCAGTGCCGGCACT
CGCCGGCGGCGCGCCACGGTGTCCATGGCTGCCAAGAAGGTGTCGTTCGG
CGAGGACTCCCGTAAGAAGCTCGTTGACGGCATCAACCAGGTCGCCAATG
CCGTCAAGGTGACGCTGGGGCCCAAGGGCCGCAATGTTGTTCTAGAGCGC
AACTACGGAGCGCCAGAAATCGTCAACGACGGTGTCACCATTGCACGAGA
CATCTCTCTGGCGGACCCAGAAGAGAATGTGGGAGCGCGGCTGGTGCAGG
AGGTTGCACAGAAGTCTGACAACAGGGCCGGCGACGGCACAACCACTTCT
ACCCTTATGACGCAGTCCATCGTAAACAACGGCCTGCGCGCTGTGACGAG
CGGCGCCAATCCTGTTGAGGTCAGGCGCGGCATCATGAAGGCGAGCGAGA
TGCTGGTGGCTGAGATCAAGGCGCTGGCTAAGCCAGTCAGTGGCATCAGT
GACCTCAACAGCATCGCCACCATTGCAAGTGGCAGTTCTGTCATGGGCAG
CATCATCTCGCAGGCCTTTGAGAAGGTTGGGGAGAACGGCAGCACGGTTG
TGGAGGAGTCTCAAACACTGGTGGATGAGGTGGACTTTACTGAGGGACTC
ACGATCGACCGCGGGTACCTGAGCCCATACTTTGTGAACGACCAGGAGCG
CCAGGTGTGCGAGATGCGCAAGCCGCGCATCCTTGTCACCGACAAGAAGA
TTGACCAGGTCAATGAGCTCATCCCTATCCTGGAGACAATGGTAAAGTCC
AAGGAGCCCCTGTTCATCGTTGCAGAGGACGTGGCGGGAGAGGCCCTGAG
CGCACTGGTCGTGAACAAGATGCGCGGGGTCCTTGACGTGTGCGCGATCC
GCGCGCCGTCATTCGGCGACAGGCGGAAGGCGTACCTTCAGGACATTGCC
ATTGCCACCGGCGCCACCTACATTGCGGAGGAGGTTGGCCTCACCCTTGA
CCAGGTGAACATGGACATGCTGGGCACGTGCGAGCGGCTGGTGGCGCAGC
GCGAGCTCACCACCATTGTCACGGACGGCAGCCAGATGGAGGCTGTCAAC
AAGCGCATTGCCGCCATCAAGCAGGAGAAGGAGGGCACCGACAACCAGTT
TGACATTGAGAAGTGCGAGGAGCGCATTGCGGCGCTGGGCGGCGGCATTG
CGCGCATCAAGGTCGGCGCGGCGACGGAGACGGAGCTGAAGGACAAGAAG
CTGCGCTACGAGGACGCGCTCAACTCTGTGCGCTCCGCGCTGGAGATGGG
GATCGTGCCGGGCGGCGGCGCGTGCATGACGTACCTGCAGCGCATGGACG
AGCGCATCATGGCGGAGTGCGCCAACGAGGACGAGAGGATCGGCGCGGGG
ATCCTGCTCAAGTCGCTGAGCGCGCCGTGCATGCAGATTGCGGCGAACGC
GGGGGTGGAGGGGGGCGTCGTCTGGGAGAAGACGCGCAACCAGGAGTTTG
GCTTTGGCTACAACGCCGCCAACGGGCGCTACGGCGACCTGCTGGAGATG
GGCGTCATCGACCCCGCAAAGGTGACCATCAATGCCATTGAGAACAGCGC
GAGTGTGGCGGCGCTGGTGCTCACAACGGAGGCGCTCATTACGGAGATTC
CCGTGAAGCTGTCGCCCGCAGAGGAGCAGGCGCAGTACGACGCCATGGGC
GGCGGCAACTACATGTAA
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