mRNA_204 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157370
Unique NamemRNA_204
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|157370 vs. uniprot
Match: A0A835YWZ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ8_9STRA)

HSP 1 Score: 902 bits (2331), Expect = 0.000e+0
Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 1
Query:    1 MTTAVLDTCVRVPFTNTDDQRKCLQQLTVQQKALSALADPGTLVAYTIRGKVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDISVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEARNVIS 1383
            MTTAVLDTCVRVPFTNTDDQRKCLQQLTVQQKALSALADPGTLVAYTIRGKVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDISVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEARNVIS
Sbjct:    1 MTTAVLDTCVRVPFTNTDDQRKCLQQLTVQQKALSALADPGTLVAYTIRGKVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDISVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEARNVIS 461          
BLAST of jgi.p|Trimin1|157370 vs. uniprot
Match: A0A835ZFL4_9STRA (EsV-1-66 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFL4_9STRA)

HSP 1 Score: 660 bits (1703), Expect = 2.820e-235
Identity = 332/461 (72.02%), Postives = 392/461 (85.03%), Query Frame = 1
Query:   13 VLDTCVRVPFTNTDDQRKCLQQLTVQQKALSALADPGTLVAY----TIRGKVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDISVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEARNVIS 1383
            +L TCVRVPFT + +Q +C+Q+LTV QKALS L+DPGTL+AY    T+ GKVLEVPK WGL NL +LGA +VED Q  GV L DEDVVS IT LRPHQ+EAT++I++AF S EYGGG LLVLPCGYGKT+TALHV AKM ++ L+VCHTDVLV QWA AI QYFPNARVG I+QN  +V DKTH+IASLKSLA+R+YDM +AGC++++VDE  H  ALQLSRA++NAGC+YRLGLSATPTRPDGLS FL WSIGE+VYEV RPPADDLRV+AV++ +GPV  K I +GGK +SN+AGMINLLTDMT ARAD+RQ+VAAAWI+LCASK RK+I+L+DRI LLRDLDRRVRD+VTT F+ G AKKAERA A D+QVVFASYG+AAEGLD+ +DTL+L +PRSGE VITQ VGRIQRGRGR PLVID+VD+V  F  MFAKRLRVYK LGA +TKYDE R+VI+
Sbjct:    1 MLTTCVRVPFTESAEQSRCVQELTVLQKALSPLSDPGTLIAYNIKDTLHGKVLEVPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVSAITQLRPHQVEATESIMKAF-SKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLPLDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENRDVIA 460          
BLAST of jgi.p|Trimin1|157370 vs. uniprot
Match: A0A835YYF9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF9_9STRA)

HSP 1 Score: 644 bits (1662), Expect = 2.430e-229
Identity = 323/442 (73.08%), Postives = 373/442 (84.39%), Query Frame = 1
Query:   70 LQQLTVQQKALSALADPGTLVAYTIR----GKVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDISVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEARNVIS 1383
            +Q+LTV QK LS L+DPGTLVAY IR    G+VLEVPK WGL NL +LGA+ VEDRQ  GV L ++DVVSTIT LRPHQ+EA D I++AF S EYGGGALLVLPCGYGKT+TALHV AKM ++CL+VCHTDVLV QWA AI QYFPNARVG I+QN+ DV DKTH+IASLKSLA+REYDM  AGC ++V DE  H AALQLSRA++NAGCRYRLGLSATP RPDGLS FL WSIGEVVYEV RPPAD+LRVYAV+L++GPVY K +RK GK +SN+AGMINL+TD++ +RAD+RQQVAAAWI LCA KGR +I+L+DRI LLRDLDRRVRDT+TTGFMIG AKKAER  A  +QVVFASYGVAAEGLD+ +DTL+ L+PRSGE VITQ VGRIQRG GR PL++D VD+V  F GMF+KR+RVY  LGA LTKYDE R VI+
Sbjct:    1 MQELTVVQKELSPLSDPGTLVAYAIRDTFHGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVSTITQLRPHQVEAADAIMKAF-SQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDLKLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMRQVIA 441          
BLAST of jgi.p|Trimin1|157370 vs. uniprot
Match: A0A835Z7P3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P3_9STRA)

HSP 1 Score: 542 bits (1396), Expect = 1.420e-188
Identity = 277/467 (59.31%), Postives = 357/467 (76.45%), Query Frame = 1
Query:    1 MTTAVLDTCVRVPFTNTDDQRKCLQQLTVQQKALSALADPGTLVAYTIR----GKVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVT-TGFMIGTAKKAERATAADSQVVFASYGVAAEGLDI-SVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEARNVIS 1383
            M TAVL TC+RVP T   + ++ + +L+++Q  LSALADP TLVAYTI     G  + +PK+W L NL +LG + +  +Q+    L D+DVVSTI  LRPHQ+EAT  + +AF ++ YGGGALLVL CG GKT+TALH+ A +K+KCL++ HTDVL  QWA AI QY+P ARVGKIQQN  DV DKTH+IASLKS+A R+YDM  AGC ++VVDE    A+LQL RA++N GC+YRLGLSATP R DGLS FL W IG VVY+++R P  DLR++ ++LD GPVY K +RK GKS++N+AGMINL+T+ T  RA +RQQVAAAWI LCA KGRK+I+LSDRI LL+ L++ ++D V  T  +IG+AK+A R  A  SQV+ ASYG+A+EG D+ S+DT++LL+PRSG NVITQCVGRIQR  G+SPLVID+VDSV  F GMFAKR +VY+ LG  +TKY+E R +++
Sbjct:    1 MATAVLQTCLRVPLT--PEIQQLIAELSIEQNQLSALADPSTLVAYTIEETAAGTFVNLPKMWALDNLDKLGVTKIIGKQLPVTMLEDKDVVSTIRQLRPHQIEATKAVTKAF-NTRYGGGALLVLSCGMGKTVTALHIAATLKLKCLIITHTDVLASQWAAAIMQYYPKARVGKIQQNTFDVEDKTHVIASLKSVATRQYDMAGAGCGLLVVDEVHRIASLQLHRAVANVGCKYRLGLSATPDRADGLSPFLKWGIGPVVYQLERDPTPDLRIFGIMLDSGPVYPKVVRKNGKSVANIAGMINLMTEDT-DRAKMRQQVAAAWIRLCAKKGRKIIVLSDRIDLLKGLEKLMKDHVDGTSLLIGSAKRAVRDVAHLSQVILASYGIASEGFDVPSLDTIILLTPRSGANVITQCVGRIQRPGGKSPLVIDIVDSVGLFKGMFAKRCKVYEHLGGTITKYNERREILT 463          
BLAST of jgi.p|Trimin1|157370 vs. uniprot
Match: A0A835YY40_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY40_9STRA)

HSP 1 Score: 397 bits (1019), Expect = 8.290e-132
Identity = 223/458 (48.69%), Postives = 313/458 (68.34%), Query Frame = 1
Query:   13 VLDTCVRVPFTNTDDQRKCLQQLTVQQKALSALADPGTLVAY-TIRGKVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDIS-VDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEARNVI 1380
            +L T VRVP     D  +    LT+QQK LSAL+ PGTL+A+ T     LEVPK+WGL          V+DRQ   +++    +  T   LRPHQ  A   I  AF ++E+GGG +LVLPCG+GKT+TA+ +  +M ++CL+VCHT VL+ QW  AIAQ+ P+A +G++QQN   V   TH+IASLKS+A+R+Y     GC ++ +DE  H +AL LS+A++  G R+RLGLSATPTR DGLS F+ WS+G  ++E +R     LRV+AV +  GPV  KT+R+ GK ++N++GM+NLL   ++A A  RQ++ AAWI LCASKGRK+++L+DR+ LLRDL +++ +  + GFM G  K  +RA AA++Q++  +YGV AEG D   +DT++L +PRSG++V+TQ VGR+ R  G+SPLVID VD V  F GM  KR++VY+ L A +T YDE RN +
Sbjct:    2 ILTTTVRVP-----DTPEVRAALTLQQKELSALSAPGTLIAFSTEEAGWLEVPKMWGLQRYE------VDDRQGPHIAVTTAPLSVT---LRPHQAAALTAIESAF-AAEHGGGGVLVLPCGFGKTMTAIALAQRMGVRCLIVCHTGVLMEQWRAAIAQFVPDAVIGEMQQNKFVVDGCTHVIASLKSVALRDYP--PHGCGLLCIDEAHHISALLLSKAVAKLGTRWRLGLSATPTRADGLSPFMTWSLGPTLFEQEREAKTGLRVFAVRVTTGPVKTKTLRRAGKEVANISGMMNLLVKKSVA-ATRRQELVAAWIRLCASKGRKVLVLADRLELLRDLSKQMGE-FSFGFMTGAVKVKDRAAAAEAQILLGTYGVVAEGFDEPRLDTVVLTTPRSGQSVMTQVVGRLLRDGGKSPLVIDFVDDVPLFVGMHWKRMKVYRKLQASVTCYDEQRNEV 440          
BLAST of jgi.p|Trimin1|157370 vs. uniprot
Match: A0A835Z102_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z102_9STRA)

HSP 1 Score: 394 bits (1012), Expect = 1.270e-130
Identity = 231/459 (50.33%), Postives = 299/459 (65.14%), Query Frame = 1
Query:   13 VLDTCVRVPFTNTDDQRKCLQQLTVQQKALSALADPGTLVAYTI-RGKVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILD---EGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDI-SVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEARN 1374
            +L + +RVP     D     Q LTV QKALSALA P TLVAY +     L VPK +GL N      S V+DRQ +  ++     ++ +  LR HQ++AT+ ++ A    + GGG +L LPCGYGKT+TAL V  ++ ++ L++ +T VL  QW   IA+  P A VG I+QN   V   TH++ASLKSLA R Y +   GC + +VDE  H AA  +SRA+++ G R+RLGLSATP R DGLS +L WSIG + Y + R  A  LRVYA+ L      PV    I KGG+ ++N AGMINLL   + A A+ RQ + A WI LC SKGRK+++LSDRI LL+DL  R+  T T GF+IG A+K ER  AA + V+ AS+  AAEGLDI S+DTL L++PRSGE VITQ VGR+ R  GRSPLV+D VD V  F GMF KR RVY++LGA +T+YD ARN
Sbjct:    2 LLTSTLRVP-----DTAATRQALTVTQKALSALAQPSTLVAYEVLEPGWLAVPKQYGLQNF-----SDVDDRQTQAETVVVPPSLA-VESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVH--GCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINLLQKPSAA-AEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRL-GTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHARN 445          
BLAST of jgi.p|Trimin1|157370 vs. uniprot
Match: A0A835ZHB6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHB6_9STRA)

HSP 1 Score: 357 bits (917), Expect = 1.250e-116
Identity = 201/417 (48.20%), Postives = 260/417 (62.35%), Query Frame = 1
Query:  157 LEVPKLWGLHNLRQLGAS-----------TVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDI-SVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEAR 1371
            +EVPK WGL  L   G +            V D Q    +     +   +  LRPHQ EA   +     SS  GGG ++VLPCG+GKT+ AL +  +M ++  +V HT VL  QW  AIAQY P+A VG+I+ +  DV  +TH+IASL+S+A REY     GC +++ DE    AA  LS A++  GCRYR+GLSATP R DGL VFL W IG VV+E +R    DLR  AV LD GPV   +I KGG+ + N++ M +L  D +  RA  RQ++A AWI LC  KGRK+++LSDR+ LL DL  R+ D  T GF+ G+AK A+R  A    V+ ASYG AAEGLD+ S+DT+LLL+PRSGE VITQ VGR+ R  G  PLV+DLVD V  F GM AKR R+ + +G  +T  DE R
Sbjct:    1 MEVPKAWGLERLAGPGGAGARAXXXXXXEAVVDAQPPCAAASTPPL--RLRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYP--PHGCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGD-YTWGFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELR 412          
BLAST of jgi.p|Trimin1|157370 vs. uniprot
Match: A0A6C0JAU8_9ZZZZ (Helicase ATP-binding domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JAU8_9ZZZZ)

HSP 1 Score: 211 bits (538), Expect = 1.450e-59
Identity = 144/416 (34.62%), Postives = 228/416 (54.81%), Query Frame = 1
Query:  151 KVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDM-TSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDI-SVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYD---EARNVIS 1383
            K + +PK +G+    +      E+R   G    D+  V     LR +QLE  +  L   +++   GG LL L CG GKT+ +L+++A++K K LVV + + L+ QW   I Q+ P+ +VGKIQ++   V D    +A LKSLA R+Y+  T     +++VDEC + A  + S+A+     +Y LGLSATPTR DGL+  + W IG++ Y+       D++V   I+       K I    K    +A MIN + + +  R D    +A     +   K R++++LS+RI LL++L+ R++DT   GF IG  K  ER  + + QV+ A++ +A E LDI S++TL+L +P+S    I Q VGRI R +    L++D+VD  + F     KRL  YK     ++ ++   E +N I+
Sbjct:   54 KQMILPKFYGIKKFGE-----AENRVPDG----DDIDVDFDGELRDNQLEPLNKTLEVLKTT---GGGLLSLHCGAGKTVLSLYIIAQLKKKTLVVVNQEFLMDQWIERIKQFLPHLKVGKIQRDKVQVEDYDISLAMLKSLATRKYEKDTFDSFGLVIVDECHNIATKEYSKALQKINSKYMLGLSATPTRTDGLTKVIKWYIGDIFYKSVVSDKFDVQVEQYIIKSADKDYKRIDLNWKKKPLIARMINNVAEYS-ERIDF---IADKIKEITKDKSRQILLLSERISLLKELELRIKDTCDYGFFIGGMKSWERELSMEKQVILATFHIAREALDIKSLNTLILATPKSN---IVQAVGRILRKKQGKHLIVDIVDDFSTFKNQRFKRLNYYKKKDYKVSTFEVDLELKNCIN 450          
BLAST of jgi.p|Trimin1|157370 vs. uniprot
Match: A0A6C0J8N5_9ZZZZ (Helicase ATP-binding domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0J8N5_9ZZZZ)

HSP 1 Score: 205 bits (521), Expect = 2.820e-57
Identity = 128/398 (32.16%), Postives = 221/398 (55.53%), Query Frame = 1
Query:  163 VPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREY--DMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMT-IARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRD-TVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDI-SVDTLLLLSPRSGENVITQCVGRIQR----GRGRSPLVIDLVDSVAPFHGMFAKRLRVY 1329
            +P+ +G++ L        E++ ++G  +     +   + LRP+Q+   +  ++    +   GG ++ +PCG+GKT+ AL++VA +K+K LV+ H + L+ QW   I  + PNARVGKIQ +I ++ DK  +I  L+S++M++Y  D+ S     ++ DEC H  A   SR++   GC Y LGLSATP R DGL+    W +G+ VY +K+   ++++V  +       Y     K  +  +N  G +N+ T +T I   + R ++    +  C   GRKL+ILSDR   L+ L  ++ +  ++ G+  G  K+ +     + QV+  ++ +A+EG D  +++T+ L SP+S    I Q VGRI R     R + P+VID++D+ + F     KR++ Y
Sbjct:   59 IPRYFGINKL----GIPKENKIVQGTPID----IKFSSKLRPNQIPVVEKFIKVAHET---GGGIISVPCGFGKTVLALYLVAALKVKTLVIVHKEFLMDQWKERIEFFLPNARVGKIQGDIVNIDDKDIVIGMLQSISMKDYPGDIFST-FGFVIYDECHHLGAEVFSRSLIKIGCNYTLGLSATPKRADGLTKVFEWFLGDTVYSIKQREQEEVKVKVIN------YYVEDDKYSEIKTNFKGQVNMPTMITNICMYEPRNEIILEEVYKCVKDGRKLLILSDRRDHLKFLHSKLNEKNISNGYYCGGMKQKDLKDTEEKQVMLGTFSMASEGFDCKTLNTIFLASPKSS---IEQAVGRILRQNKEDREKVPMVIDIIDNFSIFGRQGDKRIKFY 435          
BLAST of jgi.p|Trimin1|157370 vs. uniprot
Match: A0A6C0CTV3_9ZZZZ (Helicase ATP-binding domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CTV3_9ZZZZ)

HSP 1 Score: 201 bits (510), Expect = 2.010e-55
Identity = 141/402 (35.07%), Postives = 209/402 (51.99%), Query Frame = 1
Query:  157 LEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITH--LRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTS-AGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDR--RVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDI-SVDTLLLLSPRSGENVITQCVGRIQRGRGRS----PLVIDLVDSVAPFHGMFAKRLRVYK 1332
            L +PK +GL          +ED          ED  + I +  +RP+Q E     L A   ++  GG +L LPCG GKT+ AL + ++ K K LVVCHT+ L+ QW   I QY P AR GKI+Q IC V     +IASL+SLAMR+YD         +V+DEC H  A   SR +    C+  LGLSAT  R DGLS    W +G+ V+ +KR  ++   +     D  P Y + ++       N+A MIN + +       + Q +     ++     RK++ILS+R   L+DL+   R+   V+ G+ +G   K +    +   ++ A++ +A+E +DI  ++TL+L SP S    I Q +GRIQR +       PLVID++D  + F    AKR+  YK
Sbjct:   60 LYLPKNFGLDRFGVPNVLQMED---------GEDCPNLIFNGIIRPNQEEPVQAFLDATHDNKKMGG-ILSLPCGMGKTVIALRLSSQFKKKTLVVCHTEFLMDQWIERIEQYLPTARTGKIKQKICQVEGNDIVIASLQSLAMRDYDSAIFKDFGFVVLDECHHLGAEVFSRCLPKITCKIMLGLSATLKRKDGLSKVFEWYLGKPVFTIKRKDSEVKVLVERFYDPHPEYGRELKLWNTGKLNVARMINKICEFPPRNHRIVQVLKK---VIEIEPNRKVLILSERRTHLQDLESLLRLEQFVSIGYYVGGMSKKQLDEGSSQDIILATFQLASEAMDIPKLNTLILGSPVSS---IEQPIGRIQRKKKEEREYIPLVIDILDEFSIFERQAAKRIAFYK 445          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157370 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWZ8_9STRA0.000e+0100.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835ZFL4_9STRA2.820e-23572.02EsV-1-66 n=1 Tax=Tribonema minus TaxID=303371 RepI... [more]
A0A835YYF9_9STRA2.430e-22973.08P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835Z7P3_9STRA1.420e-18859.31P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835YY40_9STRA8.290e-13248.69P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835Z102_9STRA1.270e-13050.33P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835ZHB6_9STRA1.250e-11648.20P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6C0JAU8_9ZZZZ1.450e-5934.62Helicase ATP-binding domain-containing protein n=1... [more]
A0A6C0J8N5_9ZZZZ2.820e-5732.16Helicase ATP-binding domain-containing protein n=1... [more]
A0A6C0CTV3_9ZZZZ2.010e-5535.07Helicase ATP-binding domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:704692..706077 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157370|e_gw1.3.559.1
BRITEko00000,ko00001,ko00002,ko01000,ko03021,ko03400
KEGG ModuleM00290
KEGG Pathwayko03022,ko03420,map03022,map03420
KEGG koko:K10843
EC3.6.4.12
DescriptionATP-dependent DNA helicase activity
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1061@1|root,KOG1123@2759|Eukaryota
Evalue2.97e-64
Seed ortholog2880.D8LP98
Hectar predicted targeting categoryother localisation
TranscriptId157692
TrackFilteredModels1
ProteinId157370
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157370gene_204Tribonema minus UTEX_B_3156 geneContig_3 704692..706077 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_204_1exon_204_1Tribonema minus UTEX_B_3156 exonContig_3 704692..706077 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_204CDS_204Tribonema minus UTEX_B_3156 CDSContig_3 704692..706077 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157370Trimin1|157370|e_gw1.3.559.1Tribonema minus UTEX_B_3156 polypeptideContig_3 704692..706077 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_204 ID=mRNA_204|Name=jgi.p|Trimin1|157370|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1386bp|location=Sequence derived from alignment at Contig_3:704692..706077+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACAACCGCCGTACTTGACACGTGTGTGCGGGTGCCTTTCACTAACAC
CGATGATCAGAGGAAGTGTTTGCAGCAGCTTACAGTGCAGCAAAAGGCAC
TCAGCGCGCTAGCAGACCCCGGCACACTGGTGGCGTACACCATACGAGGC
AAGGTCCTGGAGGTGCCTAAGTTGTGGGGTCTCCACAACTTGCGGCAACT
GGGTGCTTCCACAGTAGAAGACCGTCAGATTCGTGGAGTGTCTCTCCACG
ATGAGGATGTTGTCTCCACCATCACGCACCTCAGGCCTCACCAATTGGAG
GCCACGGACACGATTTTACGGGCATTTGAGTCGAGTGAATACGGAGGAGG
GGCATTGCTGGTTTTACCATGTGGCTACGGCAAGACCATCACGGCTCTTC
ATGTAGTGGCTAAAATGAAGATGAAGTGCCTTGTCGTGTGCCACACCGAT
GTGTTGGTGTGCCAGTGGGCAACGGCCATCGCACAGTACTTCCCAAATGC
TCGTGTCGGCAAGATCCAGCAGAACATCTGCGATGTCCATGACAAGACCC
ACATCATCGCATCGCTCAAGTCCTTGGCGATGCGCGAGTACGACATGACG
TCTGCGGGGTGTGATGTGATCGTGGTCGATGAGTGTCAGCATGCAGCTGC
GCTTCAGCTGAGCAGAGCGATGTCGAACGCAGGCTGCCGCTACAGACTCG
GCCTTTCAGCTACGCCAACCCGCCCTGATGGCCTTTCAGTGTTCCTGAAT
TGGAGTATTGGAGAGGTGGTGTACGAAGTGAAACGTCCGCCTGCGGACGA
CCTGCGTGTGTATGCTGTCATTCTGGATGAGGGACCCGTGTACATGAAGA
CCATTCGCAAAGGAGGAAAGTCCATCAGCAACATGGCTGGAATGATCAAC
CTGCTCACGGACATGACCATTGCGCGAGCGGACCTGCGTCAGCAGGTGGC
GGCAGCGTGGATAATGCTTTGCGCTTCAAAGGGGCGCAAGCTGATCATCC
TATCGGACCGCATCTGTCTCCTGCGAGACCTGGACAGAAGAGTGCGGGAC
ACTGTAACAACGGGGTTCATGATCGGCACAGCGAAGAAGGCTGAACGTGC
TACTGCTGCAGATTCACAGGTGGTATTTGCCTCGTATGGAGTCGCTGCCG
AGGGCCTCGATATTTCTGTAGATACTTTGCTCTTGTTGTCTCCAAGAAGT
GGAGAAAATGTCATCACTCAATGTGTGGGCCGCATTCAGAGGGGGAGAGG
TAGATCACCTCTGGTCATTGACCTTGTAGATTCGGTAGCACCATTTCATG
GCATGTTCGCCAAGCGGCTGCGTGTATACAAAAGTCTGGGTGCGGTGCTG
ACCAAGTATGATGAGGCGCGCAACGTCATTTCCTAG
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protein sequence of jgi.p|Trimin1|157370

>Trimin1|157370|e_gw1.3.559.1 ID=Trimin1|157370|e_gw1.3.559.1|Name=jgi.p|Trimin1|157370|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=462bp
MTTAVLDTCVRVPFTNTDDQRKCLQQLTVQQKALSALADPGTLVAYTIRG
KVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLE
ATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTD
VLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMT
SAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLN
WSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMIN
LLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRD
TVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDISVDTLLLLSPRS
GENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVL
TKYDEARNVIS*
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mRNA from alignment at Contig_3:704692..706077+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_204 ID=mRNA_204|Name=jgi.p|Trimin1|157370|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1386bp|location=Sequence derived from alignment at Contig_3:704692..706077+ (Tribonema minus UTEX_B_3156 )
ATGACAACCGCCGTACTTGACACGTGTGTGCGGGTGCCTTTCACTAACAC CGATGATCAGAGGAAGTGTTTGCAGCAGCTTACAGTGCAGCAAAAGGCAC TCAGCGCGCTAGCAGACCCCGGCACACTGGTGGCGTACACCATACGAGGC AAGGTCCTGGAGGTGCCTAAGTTGTGGGGTCTCCACAACTTGCGGCAACT GGGTGCTTCCACAGTAGAAGACCGTCAGATTCGTGGAGTGTCTCTCCACG ATGAGGATGTTGTCTCCACCATCACGCACCTCAGGCCTCACCAATTGGAG GCCACGGACACGATTTTACGGGCATTTGAGTCGAGTGAATACGGAGGAGG GGCATTGCTGGTTTTACCATGTGGCTACGGCAAGACCATCACGGCTCTTC ATGTAGTGGCTAAAATGAAGATGAAGTGCCTTGTCGTGTGCCACACCGAT GTGTTGGTGTGCCAGTGGGCAACGGCCATCGCACAGTACTTCCCAAATGC TCGTGTCGGCAAGATCCAGCAGAACATCTGCGATGTCCATGACAAGACCC ACATCATCGCATCGCTCAAGTCCTTGGCGATGCGCGAGTACGACATGACG TCTGCGGGGTGTGATGTGATCGTGGTCGATGAGTGTCAGCATGCAGCTGC GCTTCAGCTGAGCAGAGCGATGTCGAACGCAGGCTGCCGCTACAGACTCG GCCTTTCAGCTACGCCAACCCGCCCTGATGGCCTTTCAGTGTTCCTGAAT TGGAGTATTGGAGAGGTGGTGTACGAAGTGAAACGTCCGCCTGCGGACGA CCTGCGTGTGTATGCTGTCATTCTGGATGAGGGACCCGTGTACATGAAGA CCATTCGCAAAGGAGGAAAGTCCATCAGCAACATGGCTGGAATGATCAAC CTGCTCACGGACATGACCATTGCGCGAGCGGACCTGCGTCAGCAGGTGGC GGCAGCGTGGATAATGCTTTGCGCTTCAAAGGGGCGCAAGCTGATCATCC TATCGGACCGCATCTGTCTCCTGCGAGACCTGGACAGAAGAGTGCGGGAC ACTGTAACAACGGGGTTCATGATCGGCACAGCGAAGAAGGCTGAACGTGC TACTGCTGCAGATTCACAGGTGGTATTTGCCTCGTATGGAGTCGCTGCCG AGGGCCTCGATATTTCTGTAGATACTTTGCTCTTGTTGTCTCCAAGAAGT GGAGAAAATGTCATCACTCAATGTGTGGGCCGCATTCAGAGGGGGAGAGG TAGATCACCTCTGGTCATTGACCTTGTAGATTCGGTAGCACCATTTCATG GCATGTTCGCCAAGCGGCTGCGTGTATACAAAAGTCTGGGTGCGGTGCTG ACCAAGTATGATGAGGCGCGCAACGTCATTTCCTAG
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Coding sequence (CDS) from alignment at Contig_3:704692..706077+

>mRNA_204 ID=mRNA_204|Name=jgi.p|Trimin1|157370|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1386bp|location=Sequence derived from alignment at Contig_3:704692..706077+ (Tribonema minus UTEX_B_3156 )
ATGACAACCGCCGTACTTGACACGTGTGTGCGGGTGCCTTTCACTAACAC
CGATGATCAGAGGAAGTGTTTGCAGCAGCTTACAGTGCAGCAAAAGGCAC
TCAGCGCGCTAGCAGACCCCGGCACACTGGTGGCGTACACCATACGAGGC
AAGGTCCTGGAGGTGCCTAAGTTGTGGGGTCTCCACAACTTGCGGCAACT
GGGTGCTTCCACAGTAGAAGACCGTCAGATTCGTGGAGTGTCTCTCCACG
ATGAGGATGTTGTCTCCACCATCACGCACCTCAGGCCTCACCAATTGGAG
GCCACGGACACGATTTTACGGGCATTTGAGTCGAGTGAATACGGAGGAGG
GGCATTGCTGGTTTTACCATGTGGCTACGGCAAGACCATCACGGCTCTTC
ATGTAGTGGCTAAAATGAAGATGAAGTGCCTTGTCGTGTGCCACACCGAT
GTGTTGGTGTGCCAGTGGGCAACGGCCATCGCACAGTACTTCCCAAATGC
TCGTGTCGGCAAGATCCAGCAGAACATCTGCGATGTCCATGACAAGACCC
ACATCATCGCATCGCTCAAGTCCTTGGCGATGCGCGAGTACGACATGACG
TCTGCGGGGTGTGATGTGATCGTGGTCGATGAGTGTCAGCATGCAGCTGC
GCTTCAGCTGAGCAGAGCGATGTCGAACGCAGGCTGCCGCTACAGACTCG
GCCTTTCAGCTACGCCAACCCGCCCTGATGGCCTTTCAGTGTTCCTGAAT
TGGAGTATTGGAGAGGTGGTGTACGAAGTGAAACGTCCGCCTGCGGACGA
CCTGCGTGTGTATGCTGTCATTCTGGATGAGGGACCCGTGTACATGAAGA
CCATTCGCAAAGGAGGAAAGTCCATCAGCAACATGGCTGGAATGATCAAC
CTGCTCACGGACATGACCATTGCGCGAGCGGACCTGCGTCAGCAGGTGGC
GGCAGCGTGGATAATGCTTTGCGCTTCAAAGGGGCGCAAGCTGATCATCC
TATCGGACCGCATCTGTCTCCTGCGAGACCTGGACAGAAGAGTGCGGGAC
ACTGTAACAACGGGGTTCATGATCGGCACAGCGAAGAAGGCTGAACGTGC
TACTGCTGCAGATTCACAGGTGGTATTTGCCTCGTATGGAGTCGCTGCCG
AGGGCCTCGATATTTCTGTAGATACTTTGCTCTTGTTGTCTCCAAGAAGT
GGAGAAAATGTCATCACTCAATGTGTGGGCCGCATTCAGAGGGGGAGAGG
TAGATCACCTCTGGTCATTGACCTTGTAGATTCGGTAGCACCATTTCATG
GCATGTTCGCCAAGCGGCTGCGTGTATACAAAAGTCTGGGTGCGGTGCTG
ACCAAGTATGATGAGGCGCGCAACGTCATTTCCTAG
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