mRNA_1971 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A835Z314_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z314_9STRA) HSP 1 Score: 742 bits (1916), Expect = 1.620e-269 Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 1 Query: 1 MACTSKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRATEGDDEKPVKPRKNHLSDNAATASRKCISQSAGNSVQLPAEVASALCGFNKYATSLSV 1218 MACTSKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRATEGDDEKPVKPRKNHLSDNAATASRKCISQSAGNSVQLPAEVASALCGFNKYATSLSV Sbjct: 1 MACTSKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRATEGDDEKPVKPRKNHLSDNAATASRKCISQSAGNSVQLPAEVASALCGFNKYATSLSV 406
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA) HSP 1 Score: 351 bits (900), Expect = 4.580e-115 Identity = 184/365 (50.41%), Postives = 217/365 (59.45%), Query Frame = 1 Query: 13 SKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV-DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETS--------------------NQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRA 1044 S+KR A A W TLGRWVCL+TSG+GP PRSGH VV G A+LFGGCG D++A LND Y+F+L+THQW V VN EPP R+SF MCA P RSI VAGGTG + DSL DIVEFDT R W RVV D +TP YGQS C YG SL+LFGG++G+ Y N G F P+ S +DV+ L+L TL W V TSG+ P+SRVAH+C +D T TI +WGGF+S L RLQDF+ LHC TATW + PP RAFHAACF + ALY+F GA+GD RY+DVWRY SPPSLGVLAAR +RA Sbjct: 4 SRKRPAHVA--WEDTLGRWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRA 366
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI) HSP 1 Score: 298 bits (764), Expect = 1.250e-94 Identity = 152/343 (44.31%), Postives = 200/343 (58.31%), Query Frame = 1 Query: 64 RWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV-DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWT---------------TETSNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRA 1044 +W L TSG+ P PRSGH VV G+ A+LFGGCG E D++ LND Y FNLE H+W V V + P R+SF MCA P ++ VAGGTG + DSL D+VE++ RTW++++ D +TP YGQS C YG +L+LFGG++GL Y N G F P+ S +D+YCL+L +LVW+ GE P++RVAH+CSFD TDTI +WGGF+S L RLQDF HC TATW T+ PP RAFH+A F +G LY+F GA+GD RY+DVWR+ VR +PPSL +L A ++++ Sbjct: 36 QWTKLNTSGDSPSPRSGHDVVVIGHKAYLFGGCG-GEQDQITCLNDVYVFNLELHRWSKVTVKGDAPLPRASFGMCAGP-APGTLIVAGGTGVEMDSLRADVVEYNVPNRTWTQILTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYTNDLFEYNVRTNKWKRLVTSGRMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDLRSLVWEETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQAPVAGGATDLVGAPPARAFHSAAFFQGGLYVFSGANGDVRYSDVWRFQVRSTPPSLSMLVAHKIKS 376
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI) HSP 1 Score: 291 bits (745), Expect = 6.210e-92 Identity = 153/336 (45.54%), Postives = 197/336 (58.63%), Query Frame = 1 Query: 52 STLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV-DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTS--GEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSN----QPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQL 1038 +T+GRWV L+TSG P PRSGH V GN A+LFGGCG E D++ LND Y F+L+ H+W+ + AR+SF MC P ++ VAGGTG + DSL D+VE++T RTW+ V+ D +TP YGQS C YG +L+LFGG++GL Y N G F P+ S +D+YCL+L TLVW+ T G+ P++RVAH+CSFD I +WGGF+ L RL DF++ +C +A W PP RAFH+A FH GALYLF GA+GD RYNDVWRY VR SPPSL VLA++ L Sbjct: 27 TTMGRWVRLQTSGRPPSPRSGHDVAVIGNKAYLFGGCGGDE-DQITCLNDMYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPG-TVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLTTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVL 360
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA) HSP 1 Score: 285 bits (729), Expect = 3.050e-89 Identity = 155/352 (44.03%), Postives = 195/352 (55.40%), Query Frame = 1 Query: 64 RWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEP-PTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV-DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSNQPPP-------------------------RAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQL 1038 RWV L+ G P PRSGH V GN +LFGGCG E D + LND Y+F+L+ H W+L+ E PTAR+SF+MC+ PD +++ VAGGTG + DSL DI++FDT R W ++ D D P YGQ+ C YG L+LFGG++GL Y N G F P+ S +D+YCLNL TLVW ++G P++RVAH+CSFD T TI +WGGF+ L RLQDF+ H T WT E PP RAFH+A F+KGALY+F GA+GD RYNDVWRY +R SPP+LGVLA R L Sbjct: 34 RWVKLQVCGTVPSPRSGHDVAVVGNKLYLFGGCG-GENDAINCLNDMYTFDLDRHVWELIPHRGEEMPTARASFAMCSGPD-EKTLIVAGGTGVEMDSLRSDILQFDTRTRRWIKLHRDGDDAPSKFYGQTVCRYGDVLLLFGGSTGLHYTNDLFEYNVVTNCWRKLVTQGRRPSPRYKHQAVVVGDFMYVIGGGCFKPEQSAIDMYCLNLRTLVWAQPRSAGAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAPTGEWT-EIRTAPPXXXXXXXXXXXXXXXXXXXXXVAPYARAFHSAVFYKGALYVFSGANGDVRYNDVWRYRMRSSPPALGVLAGRAL 382
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA) HSP 1 Score: 280 bits (717), Expect = 1.390e-87 Identity = 155/364 (42.58%), Postives = 202/364 (55.49%), Query Frame = 1 Query: 7 CTSKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEP-PTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVG-DTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWT---TETSNQPPP---------------RAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQL 1038 C SKK A ++ +WV L+TSG P PRSGH V G+ +LFGGCG E D + LND Y+F+L++H+W+ V + P+AR+SF MCA P + +I VAGGTG + DSL D++EFDT + WS++ G D P YGQ+ C YG L+LFGG++GL Y N G F P+ + +D+Y L+L TLVW GE P++RVAH+CSFD AT TI +WGGF+ L RLQDF + A W T ++ P RAFH+A FH GALY+F GA+GD RYNDVWR+ VR +PP+LGVLAAR L Sbjct: 10 CKSKKAVAKASLPRRQEHQQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCG-GENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGP-AANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARAL 371
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A7S2XVZ9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVZ9_9STRA) HSP 1 Score: 221 bits (564), Expect = 8.730e-65 Identity = 128/343 (37.32%), Postives = 173/343 (50.44%), Query Frame = 1 Query: 58 LGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVGDTPWI-LYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETS--NQPP-PRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSL-----GVLAARQLRATEGDD 1059 L W + +G RSGH +V + +LFGGCG +++ + L+D F+ T W V+ EPP AR+SF M PD ++ VAGGTG D D+ DI E++ + TW ++ + YGQS C Y G+L FGG+ G Y N G + P +DV+ L+L+TL W TSG PQ RVAHTC++D T I +WGGF+ LHRL DFH+L +T W+T S NQ P PRAFH +C H G+ Y+F GADGD R++DVWR+ +PPSL G +A Q T D+ Sbjct: 30 LKTWQKVPCAGTITGGRSGHGMVVYQSKVYLFGGCGGESVEERSCLSDFLVFDFSTQSWSAVQTRGEPPHARASFGMSRGPDPG-TLIVAGGTGQDMDTFS-DIYEYNISSSTWRLLIKGEKANFCKYYGQSICEYKGNLFFFGGSRGRTYSNVLYRYDCAQEEGAAVPTTGKAPCPRYKQQMMVVKDSLLVIGGGNYRPPTHQIDVHELDLLTLNWSQWKTSGNVPQGRVAHTCTYDENTHQIYLWGGFNVVLHRLNDFHVLDIATRKWSTIISLDNQSPRPRAFHCSCLHDGSFYIFGGADGDFRHSDVWRFRTNVTPPSLMSICAGTVAKSQSPKTAADE 370
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A7S3XN17_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN17_HETAK) HSP 1 Score: 214 bits (544), Expect = 4.160e-61 Identity = 128/340 (37.65%), Postives = 172/340 (50.59%), Query Frame = 1 Query: 58 LGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLC-HDIVEFDTHARTWSRVV--DVGDTPWILYGQSQCAYGGSLILFGG-TSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEA-PQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTET--------SNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQL 1038 L W L G+ PC RSGH VV G+T +LFGG G +E LA +N SF+LET +W +K + + P R++F+MC D SIF+ GGT D L ++ +F HAR W RVV + G +G+S AY SL+ FGG G + N G ++P +D +CL+L T+VW + SG A P+ R AHTC +D + MWGGF+ +L LQD H L +T WT N PP R+FHAACFH+G+LY F G+DG+ RY+DV RY +R +P L LAAR + Sbjct: 97 LNVWKTLHQVGQVPCERSGHAVVLVGSTVYLFGGYGGSEPVHLADIN---SFDLETRRWNRIKDSGDVPCPRTAFAMCW--DKQDSIFLWGGTDHDLQGLADQEVYQFHIHARKWERVVTRNRGILNLRYFGRSATAYKNSLLFFGGGVKGGRFTNELLQLDLDTMVWSRLETTGEAPCARYKHQALLVQDKLYIVGGGCYLPPTEEIDAFCLDLRTMVWAKLAMSGAALPEGRAAHTCEYDPVGHALYMWGGFNKSLVPLQDLHRLDLATGAWTALCRNAKEGGGGNAPPCRSFHAACFHRGSLYSFNGSDGERRYDDVARYQLRRAPARLAQLAARSV 431
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A7S2V4S9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4S9_9STRA) HSP 1 Score: 207 bits (526), Expect = 3.230e-59 Identity = 132/351 (37.61%), Postives = 185/351 (52.71%), Query Frame = 1 Query: 13 SKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTT-------------ETSNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLA 1026 +K+ +A SAP + L W ++ GE P RSGH + G+ ++FGGCG D A + D +++T WQ V+ + E P+ R+SF+M P+ S SI V+GGTG D LC D+ EF+ W R++ G+ YGQS C + + FGG+ G +Y N XXXXXXXXXX G + P +DVY LN+IT+ W V+T+G P+ RVAH +D ++ I +WGGF+STLHRL DF L + W + + P PRAFH A F+ ++Y+F GADG NR+ D+W+Y +R SP SL LA Sbjct: 9 AKRDSATSAPEDNNKLNCWKVVKFQGEHPGARSGHGLAIIGHYLYIFGGCG-GPTDGGACMADFMRMDMKTLTWQNVRSHGENPSPRASFAMVGVPERS-SIIVSGGTG--DDLLCDDLFEFNIPTGHWCRILSDGNNFAKYYGQSVCVFRSHVYFFGGSKGTQYTNQLXXXXXXXXXXSEVQTRGTVPDARYKHQALMVGSNMFVIGGGNYRPVNENLDVYKLNMITMEWSCVHTTGCIPKGRVAHVAEYDRLSNKIYVWGGFTSTLHRLHDFFSLALDSMEWECLSEKNGWMEKNDRQMKSGPCPRAFHGAFFYDSSMYIFGGADGQNRHEDMWKYQLRCSPLSLLDLA 355
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A7S2UXP7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP7_9STRA) HSP 1 Score: 201 bits (512), Expect = 2.080e-57 Identity = 121/339 (35.69%), Postives = 173/339 (51.03%), Query Frame = 1 Query: 64 RWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV----DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSNQ-----PPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRATEG 1053 +W L+ + R H VV G A++FGGC + +A D F+ + + +K E P+ R+SF+MC PD ++ +AGGTG D DI E+++ +R W+R+ + T LYGQS C YG SLI FGG+SG Y N G ++P +DV+CL+ TL W VN G+ PQ+RVAHT D ++ I +WGGF+++L+RLQDF T+TWT N+ P PRAFHA+C + +++F GA+ +NRY+DVW+Y VR +P SL VLA R +T G Sbjct: 3 QWKRLKCNVNEISARCDHGVVVLGPYAYIFGGCT-GPVSSMACSPDLICFDFKARRCIKIKCAGEKPSGRASFAMCKGPD-KGTLILAGGTG-DDGLPRGDIWEYNSLSRKWNRLFLSDGGLASTFCRLYGQSVCCYGRSLIFFGGSSGKCYSNEVFKFDVDTLQYEQLKTKGTAPYARYKHQANIVGNKMFIFGGGNYLPSTKNIDVFCLDFETLRWNKVNALGQEPQARVAHTTVMDEISNKIYLWGGFNTSLNRLQDFFCFDIITSTWTALHCNKTSSYCPSPRAFHASCIYGDGIFIFGGANEENRYSDVWKYLVRHNPLSLMVLATRATLSTSG 338 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1971 ID=mRNA_1971|Name=jgi.p|Trimin1|163519|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1221bp|location=Sequence derived from alignment at Contig_26:654628..656604+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCATGCACTAGCAAAAAGCGTGCAGCAGTCTCTGCACCAACATGGGGback to top protein sequence of jgi.p|Trimin1|163519 >Trimin1|163519|e_gw1.26.171.1 ID=Trimin1|163519|e_gw1.26.171.1|Name=jgi.p|Trimin1|163519|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=407bp MACTSKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLback to top mRNA from alignment at Contig_26:654628..656604+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1971 ID=mRNA_1971|Name=jgi.p|Trimin1|163519|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1977bp|location=Sequence derived from alignment at Contig_26:654628..656604+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_26:654628..656604+ >mRNA_1971 ID=mRNA_1971|Name=jgi.p|Trimin1|163519|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1221bp|location=Sequence derived from alignment at Contig_26:654628..656604+ (Tribonema minus UTEX_B_3156 )back to top |