mRNA_1937 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|163427 vs. uniprot
Match: A0A835YYF9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF9_9STRA) HSP 1 Score: 856 bits (2212), Expect = 1.930e-313 Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 1 Query: 1 MQELTVVQKELSPLSDPGTLVAYAIRDTFHGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVSTITQLRPHQVEAADAIMKAFSQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDLKLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMRQVIA 1323 MQELTVVQKELSPLSDPGTLVAYAIRDTFHGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVSTITQLRPHQVEAADAIMKAFSQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDLKLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMRQVIA Sbjct: 1 MQELTVVQKELSPLSDPGTLVAYAIRDTFHGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVSTITQLRPHQVEAADAIMKAFSQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDLKLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMRQVIA 441
BLAST of jgi.p|Trimin1|163427 vs. uniprot
Match: A0A835ZFL4_9STRA (EsV-1-66 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFL4_9STRA) HSP 1 Score: 711 bits (1835), Expect = 1.060e-255 Identity = 351/441 (79.59%), Postives = 400/441 (90.70%), Query Frame = 1 Query: 1 MQELTVVQKELSPLSDPGTLVAYAIRDTFHGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVSTITQLRPHQVEAADAIMKAFSQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDLKLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMRQVIA 1323 +QELTV+QK LSPLSDPGTL+AY I+DT HG+VLEVPKFWGL+NL++LGA +VED QF+GV+L+++DVVS ITQLRPHQVEA ++IMKAFS+EYGGG LLVLPCGYGKTVTALHVAAKMGVR LIVCHTDVLV+QWAAAI+QYFPNARVG+IKQN F+V+DKTHVIASLKSLAVR+YDM+ AGC LM+ DE HH+ ALQLSRAVANAGC+YRLGLSATP RPDGLSDFL WSIGE+VYEV RPPAD+LRV+AVM+ DGPV TK++ + GKDVSNIAGMINL+TD++N+RADMRQ+VAAAWI LCA K R IIVLADRISLLRDLDRRVRD++TT F+ GAAKKAER AAG AQVVFASYG+AAEGLDL LDTL+ TPRSGEGVITQ VGRIQRG GRPPL++D VDAVPLF MF+KR+RVY KLGAK+TKYDE R VIA Sbjct: 20 VQELTVLQKALSPLSDPGTLIAYNIKDTLHGKVLEVPKFWGLDNLEKLGAVSVEDHQFEGVRLEDEDVVSAITQLRPHQVEATESIMKAFSKEYGGGGLLVLPCGYGKTVTALHVAAKMGVRGLIVCHTDVLVTQWAAAIVQYFPNARVGLIKQNTFNVDDKTHVIASLKSLAVRDYDMQTAGCELMIVDEAHHVCALQLSRAVANAGCKYRLGLSATPTRPDGLSDFLAWSIGEIVYEVTRPPADDLRVFAVMMGDGPVRTKLISRGGKDVSNIAGMINLLTDMTNARADMRQRVAAAWILLCASKRRKIIVLADRISLLRDLDRRVRDSVTTSFLFGAAKKAERAAAGDAQVVFASYGLAAEGLDLPLDTLILTTPRSGEGVITQTVGRIQRGRGRPPLVIDIVDAVPLFLSMFAKRLRVYKKLGAKMTKYDENRDVIA 460
BLAST of jgi.p|Trimin1|163427 vs. uniprot
Match: A0A835YWZ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ8_9STRA) HSP 1 Score: 642 bits (1655), Expect = 2.700e-228 Identity = 323/442 (73.08%), Postives = 373/442 (84.39%), Query Frame = 1 Query: 1 MQELTVVQKELSPLSDPGTLVAYAIRDTFHGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVSTITQLRPHQVEAADAIMKAF-SQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDLKLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMRQVIA 1323 +Q+LTV QK LS L+DPGTLVAY IR G+VLEVPK WGL NL +LGA+ VEDRQ GV L ++DVVSTIT LRPHQ+EA D I++AF S EYGGGALLVLPCGYGKT+TALHV AKM ++CL+VCHTDVLV QWA AI QYFPNARVG I+QN+ DV DKTH+IASLKSLA+REYDM AGC ++V DE H AALQLSRA++NAGCRYRLGLSATP RPDGLS FL WSIGEVVYEV RPPAD+LRVYAV+L++GPVY K +RK GK +SN+AGMINL+TD++ +RAD+RQQVAAAWI LCA KGR +I+L+DRI LLRDLDRRVRDT+TTGFMIG AKKAER A +QVVFASYGVAAEGLD+ +DTL+ L+PRSGE VITQ VGRIQRG GR PL++D VD+V F GMF+KR+RVY LGA LTKYDE R VI+ Sbjct: 24 LQQLTVQQKALSALADPGTLVAYTIR----GKVLEVPKLWGLHNLRQLGASTVEDRQIRGVSLHDEDVVSTITHLRPHQLEATDTILRAFESSEYGGGALLVLPCGYGKTITALHVVAKMKMKCLVVCHTDVLVCQWATAIAQYFPNARVGKIQQNICDVHDKTHIIASLKSLAMREYDMTSAGCDVIVVDECQHAAALQLSRAMSNAGCRYRLGLSATPTRPDGLSVFLNWSIGEVVYEVKRPPADDLRVYAVILDEGPVYMKTIRKGGKSISNMAGMINLLTDMTIARADLRQQVAAAWIMLCASKGRKLIILSDRICLLRDLDRRVRDTVTTGFMIGTAKKAERATAADSQVVFASYGVAAEGLDISVDTLLLLSPRSGENVITQCVGRIQRGRGRSPLVIDLVDSVAPFHGMFAKRLRVYKSLGAVLTKYDEARNVIS 461
BLAST of jgi.p|Trimin1|163427 vs. uniprot
Match: A0A835Z7P3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P3_9STRA) HSP 1 Score: 539 bits (1389), Expect = 7.750e-188 Identity = 271/440 (61.59%), Postives = 342/440 (77.73%), Query Frame = 1 Query: 7 ELTVVQKELSPLSDPGTLVAYAIRDTFHGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVSTITQLRPHQVEAADAIMKAFSQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTIT-TGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDL-KLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMRQVI 1320 EL++ Q +LS L+DP TLVAY I +T G + +PK W L+NLD+LG + +Q L+++DVVSTI QLRPHQ+EA A+ KAF+ YGGGALLVL CG GKTVTALH+AA + ++CLI+ HTDVL SQWAAAI+QY+P ARVG I+QN FDVEDKTHVIASLKS+A R+YDM AGC L+V DEVH IA+LQL RAVAN GC+YRLGLSATP+R DGLS FL W IG VVY++ R P +LR++ +ML+ GPVY KVVRK GK V+NIAGMINLMT+ RA MRQQVAAAWI LCA+KGR IIVL+DRI LL+ L++ ++D + T +IG+AK+A R+ A +QV+ ASYG+A+EG D+ LDT++ LTPRSG VITQ VGRIQR G+ PL++D VD+V LF+GMF+KR +VY LG +TKY+E R+++ Sbjct: 24 ELSIEQNQLSALADPSTLVAYTIEETAAGTFVNLPKMWALDNLDKLGVTKIIGKQLPVTMLEDKDVVSTIRQLRPHQIEATKAVTKAFNTRYGGGALLVLSCGMGKTVTALHIAATLKLKCLIITHTDVLASQWAAAIMQYYPKARVGKIQQNTFDVEDKTHVIASLKSVATRQYDMAGAGCGLLVVDEVHRIASLQLHRAVANVGCKYRLGLSATPDRADGLSPFLKWGIGPVVYQLERDPTPDLRIFGIMLDSGPVYPKVVRKNGKSVANIAGMINLMTE-DTDRAKMRQQVAAAWIRLCAKKGRKIIVLSDRIDLLKGLEKLMKDHVDGTSLLIGSAKRAVRDVAHLSQVILASYGIASEGFDVPSLDTIILLTPRSGANVITQCVGRIQRPGGKSPLVIDIVDSVGLFKGMFAKRCKVYEHLGGTITKYNERREIL 462
BLAST of jgi.p|Trimin1|163427 vs. uniprot
Match: A0A835YY40_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY40_9STRA) HSP 1 Score: 423 bits (1088), Expect = 1.510e-142 Identity = 234/438 (53.42%), Postives = 306/438 (69.86%), Query Frame = 1 Query: 10 LTVVQKELSPLSDPGTLVAYAIRDTFHGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVSTITQLRPHQVEAADAIMKAFSQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDL-KLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMRQVI 1320 LT+ QKELS LS PGTL+A++ T LEVPK WGL+ + V+DRQ G + ++T LRPHQ A AI AF+ E+GGG +LVLPCG+GKT+TA+ +A +MGVRCLIVCHT VL+ QW AAI Q+ P+A +G ++QN F V+ THVIASLKS+A+R+Y GC L+ DE HHI+AL LS+AVA G R+RLGLSATP R DGLS F+ WS+G ++E R LRV+AV + GPV TK +R+AGK+V+NI+GM+NL+ S + A RQ++ AAWI LCA KGR ++VLADR+ LLRDL +++ + + GFM GA K +R AA AQ++ +YGV AEG D +LDT+V TPRSG+ V+TQ+VGR+ R G+ PL++DFVD VPLF GM KRM+VY KL A +T YDE R + Sbjct: 19 LTLQQKELSALSAPGTLIAFS---TEEAGWLEVPKMWGLQRYE------VDDRQ--GPHIAVTTAPLSVT-LRPHQAAALTAIESAFAAEHGGGGVLVLPCGFGKTMTAIALAQRMGVRCLIVCHTGVLMEQWRAAIAQFVPDAVIGEMQQNKFVVDGCTHVIASLKSVALRDYPPH--GCGLLCIDEAHHISALLLSKAVAKLGTRWRLGLSATPTRADGLSPFMTWSLGPTLFEQEREAKTGLRVFAVRVTTGPVKTKTLRRAGKEVANISGMMNLLVKKSVA-ATRRQELVAAWIRLCASKGRKVLVLADRLELLRDLSKQMGE-FSFGFMTGAVKVKDRAAAAEAQILLGTYGVVAEGFDEPRLDTVVLTTPRSGQSVMTQVVGRLLRDGGKSPLVIDFVDDVPLFVGMHWKRMKVYRKLQASVTCYDEQRNEV 440
BLAST of jgi.p|Trimin1|163427 vs. uniprot
Match: A0A835Z102_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z102_9STRA) HSP 1 Score: 400 bits (1027), Expect = 3.420e-133 Identity = 237/445 (53.26%), Postives = 296/445 (66.52%), Query Frame = 1 Query: 4 QELTVVQKELSPLSDPGTLVAYAIRDTFHGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVS----TITQLRPHQVEAADAIMKAFSQ-EYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDG---PVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDL-KLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMR 1311 Q LTV QK LS L+ P TLVAY + + L VPK +GL+N + V+DRQ Q + VV + LR HQV+A +A+M A ++ + GGG +L LPCGYGKTVTAL VA ++GVR LI+ +T VL +QW A I + P A VG IKQN F V+ THV+ASLKSLA R Y + GC L + DE HHIAA +SRA+A+ G R+RLGLSATP R DGLS +L WSIG + Y + R A LRVYA+ L PV T + K G+ V+N AGMINL+ S + A+ RQ + A WI LC KGR ++VL+DRISLL+DL R+ T T GF+IGAA+K EREAA +A V+ AS+ AAEGLD+ LDTL +TPRSGE VITQ+VGR+ R GR PL++DFVD V LF GMF KR RVY LGA +T+YD R Sbjct: 17 QALTVTQKALSALAQPSTLVAYEVLEPGW---LAVPKQYGLQNF-----SDVDDRQ-----TQAETVVVPPSLAVESLRAHQVKATEAVMTALTRRQEGGGCILQLPCGYGKTVTALEVARRLGVRTLIIVNTQVLEAQWKAVIAEKVPGAVVGCIKQNDFSVDGTTHVVASLKSLATRRYPVH--GCGLTIVDEAHHIAACLMSRALAHCGTRWRLGLSATPERADGLSCYLQWSIGPLAYSIGRAIAQGLRVYAIELSGPSRTPVRTLNIHKGGQLVANSAGMINLLQKPS-AAAEFRQALVATWIRLCVSKGRKVLVLSDRISLLKDLSGRL-GTATFGFIIGAARKEEREAAAAADVICASFACAAEGLDIPSLDTLCLVTPRSGEAVITQVVGRLLRAGGRSPLVLDFVDDVRLFGGMFGKRCRVYRTLGATVTRYDHAR 444
BLAST of jgi.p|Trimin1|163427 vs. uniprot
Match: A0A835ZHB6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHB6_9STRA) HSP 1 Score: 379 bits (974), Expect = 1.580e-125 Identity = 217/416 (52.16%), Postives = 269/416 (64.66%), Query Frame = 1 Query: 100 LEVPKFWGLENL---DRLGANAVEDRQFDGVQLQEQDVVSTITQ------LRPHQVEAADAIMKAF-SQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGCALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDL-KLDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDEMRQ 1314 +EVPK WGLE L GA A + V + + T LRPHQ EA A+ S GGG ++VLPCG+GKTV AL + +MGVR IV HT VL +QW AAI QY P+A VG I+ + FDVE +THVIASL+S+A REY GC LM+ADE H +AA LS AVA GCRYR+GLSATP R DGL FLGW IG VV+E R +LR AV L+ GPV T + K G+ V NI+ M +L D S RA RQ++A AWI LC KGR ++VL+DR++LL DL R+ D T GF+ G+AK A+R+AA V+ ASYG AAEGLD+ LDT++ LTPRSGE VITQ+VGR+ R G PPL+VD VD VPLF GM +KR R+ +G +T DE+R+ Sbjct: 1 MEVPKAWGLERLAGPGGAGARAXXXXXXEAVVDAQPPCAAASTPPLRLRALRPHQTEALAALESRLRSSPLGGGGVVVLPCGFGKTVAALELCRRMGVRAAIVVHTSVLAAQWKAAIAQYVPDASVGEIRADAFDVEGRTHVIASLQSVAFREYPPH--GCGLMIADERHRVAAPALSAAVARIGCRYRVGLSATPVRADGLHVFLGWCIGPVVHETRRESRRDLRAIAVRLDPGPVRTISISKGGRRVDNISAMTSLTCDFSEPRAVRRQELAGAWIRLCVGKGRKVLVLSDRVALLSDLSTRLGD-YTWGFLTGSAKPADRKAAEGRDVILASYGCAAEGLDVPSLDTVLLLTPRSGEAVITQVVGRLFRTGGMPPLVVDLVDGVPLFEGMHAKRRRIMRGMGGTVTDCDELRR 413
BLAST of jgi.p|Trimin1|163427 vs. uniprot
Match: Q8QNK6_ESV1K (EsV-1-66 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNK6_ESV1K) HSP 1 Score: 222 bits (566), Expect = 7.660e-64 Identity = 153/424 (36.08%), Postives = 230/424 (54.25%), Query Frame = 1 Query: 67 YAIRDTF-----HGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVSTITQLRPHQVEAADAIMKAFSQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGC-ALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDT--ITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDL-KLDTLVALTPRSGEGVITQIVGRIQRGHG--RPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDE 1305 YA R+ F G VP+ +G+ N + EDRQ G L ++ LR QVE + ++A +GG ++ L CG+GKT +L V+ + +I+ HT L+ QW I Q+ NA VG+++++ DV ++HVIA ++S++ R Y + LM+ DE HH+ A QLSR V GC+ RLGLSATP R DG++ FL SIG + V R + L V V + GP T +++ GK N+A MIN + D+++ + R ++ I + R +IVL+DR + L+ + + +T + GFM+G K A+ EA + +V+ A+Y +EGLD+ LDT V TPRS I Q GRI R H + P ++DFVD +F+G KR Y+KL A + +DE Sbjct: 39 YASREPFVCYSDGGDGFIVPRMYGV-NFIQAENLPFEDRQNHGESLPH---IAFSGSLRERQVEPVEKTIRALETVHGG--VMSLYCGFGKTTCSLKVSCHFKKKTIILVHTTALLEQWKERIEQFVTNASVGVLQRDNIDVTGRSHVIALMQSVSRRNYPRELLDSFGLMIVDEAHHVCAAQLSRCVTKVGCKLRLGLSATPFRKDGMTQFLFDSIGPICARVDRGYEEVL-VDVVYVTSGPSETVCMKRKGKQSPNLAKMINNLCDVNDPAGESRTELVIETIVNALAEHRHVIVLSDRRNHLKVMGSMLAETAGVEVGFMVGGIKPADIEAVSARRVIMATYAYCSEGLDIPSLDTCVLATPRSD---IVQCCGRILRYHPSKQVPRVIDFVDDSVVFQGQARKRNMYYSKLRAFINYFDE 452
BLAST of jgi.p|Trimin1|163427 vs. uniprot
Match: D8LP98_ECTSI (EsV-1-66 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP98_ECTSI) HSP 1 Score: 221 bits (564), Expect = 1.470e-63 Identity = 156/425 (36.71%), Postives = 227/425 (53.41%), Query Frame = 1 Query: 64 AYAIRDTF-----HGRVLEVPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVSTITQLRPHQVEAADAIMKAFSQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGC-ALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDT--ITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDL-KLDTLVALTPRSGEGVITQIVGRIQRGHGRP--PLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYDE 1305 AYA R+ F G VP+ +G+ N + G EDRQ G L +S LR QVE + ++A +GG ++ L CG+GKT +L V+ + +I+ HT L+ QW I Q+ NA VG+++++ DV ++HVIA ++S++ R Y + LM+ DE HH+ A QLSR V GC+ RLGLSATP R DG++ FL SIG + V R + + V V + GP V++ G+ NIA MIN + D+ + + R + I + R IIVL+DR + L+ + + +T + GFM+G + A+ EAA + +V+ A+Y +EGLD+ LDT V TPRS I Q GRI R H P ++DFVD +F G KR Y+KL A + DE Sbjct: 37 AYASREPFVCYSDGGDGFIVPRMYGV-NFIQAGNLPCEDRQKPGESLPH---ISFSGTLRECQVEPVEKTIRALETAHGG--VMSLYCGFGKTTCSLKVSCHFKKKTIILVHTTALLEQWKERIEQFVTNASVGVLQRDKIDVTGRSHVIALMQSVSRRNYPRELLDSFGLMIVDEAHHVCATQLSRCVTKVGCKLRLGLSATPFRKDGMTQFLFDSIGPICARVDRE-YEEVFVDVVYVTSGPSEMVCVKRKGRLSPNIAKMINNLCDMHDPDGEFRTGLVIETIVNALAEDRHIIVLSDRRNHLKVMGSMLAETAGVEVGFMVGGTRPADIEAASACRVIMATYAYCSEGLDIPSLDTCVFATPRSD---IVQCCGRILRYHPSKQIPRVIDFVDNSVVFHGQARKRAMYYSKLCAFMNYLDE 451
BLAST of jgi.p|Trimin1|163427 vs. uniprot
Match: A0A6C0JAU8_9ZZZZ (Helicase ATP-binding domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JAU8_9ZZZZ) HSP 1 Score: 202 bits (514), Expect = 2.750e-56 Identity = 139/401 (34.66%), Postives = 217/401 (54.11%), Query Frame = 1 Query: 106 VPKFWGLENLDRLGANAVEDRQFDGVQLQEQDVVSTITQLRPHQVEAADAIMKAFSQEYGGGALLVLPCGYGKTVTALHVAAKMGVRCLIVCHTDVLVSQWAAAILQYFPNARVGMIKQNMFDVEDKTHVIASLKSLAVREYDMKQAGC-ALMVADEVHHIAALQLSRAVANAGCRYRLGLSATPNRPDGLSDFLGWSIGEVVYEVVRPPADNLRVYAVMLEDGPVYTKVVRKAGKDVSNIAGMINLMTDLSNSRADMRQQVAAAWITLCAQKGRSIIVLADRISLLRDLDRRVRDTITTGFMIGAAKKAEREAAGSAQVVFASYGVAAEGLDLK-LDTLVALTPRSGEGVITQIVGRIQRGHGRPPLIVDFVDAVPLFRGMFSKRMRVYNKLGAKLTKYD 1302 +PKF+G++ E+R DG + V +LR +Q+E + ++ GG LL L CG GKTV +L++ A++ + L+V + + L+ QW I Q+ P+ +VG I+++ VED +A LKSLA R+Y+ L++ DE H+IA + S+A+ +Y LGLSATP R DGL+ + W IG++ Y+ V +++V +++ K + K IA MIN + + S R D +A + K R I++L++RISLL++L+ R++DT GF IG K ERE + QV+ A++ +A E LD+K L+TL+ TP+S I Q VGRI R LIVD VD F+ KR+ Y K K++ ++ Sbjct: 58 LPKFYGIKKFGE-----AENRVPDGDDID----VDFDGELRDNQLEPLNKTLEVLKTT--GGGLLSLHCGAGKTVLSLYIIAQLKKKTLVVVNQEFLMDQWIERIKQFLPHLKVGKIQRDKVQVEDYDISLAMLKSLATRKYEKDTFDSFGLVIVDECHNIATKEYSKALQKINSKYMLGLSATPTRTDGLTKVIKWYIGDIFYKSVVSDKFDVQVEQYIIKSADKDYKRIDLNWKKKPLIARMINNVAEYSE-RIDF---IADKIKEITKDKSRQILLLSERISLLKELELRIKDTCDYGFFIGGMKSWERELSMEKQVILATFHIAREALDIKSLNTLILATPKSN---IVQAVGRILRKKQGKHLIVDIVDDFSTFKNQRFKRLNYYKKKDYKVSTFE 440 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163427 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1937 ID=mRNA_1937|Name=jgi.p|Trimin1|163427|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1326bp|location=Sequence derived from alignment at Contig_26:574284..575609- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCAGGAGCTGACTGTGGTGCAAAAAGAGTTAAGCCCACTGTCTGACCCback to top protein sequence of jgi.p|Trimin1|163427 >Trimin1|163427|e_gw1.26.273.1 ID=Trimin1|163427|e_gw1.26.273.1|Name=jgi.p|Trimin1|163427|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=442bp MQELTVVQKELSPLSDPGTLVAYAIRDTFHGRVLEVPKFWGLENLDRLGAback to top mRNA from alignment at Contig_26:574284..575609- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1937 ID=mRNA_1937|Name=jgi.p|Trimin1|163427|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1326bp|location=Sequence derived from alignment at Contig_26:574284..575609- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_26:574284..575609- >mRNA_1937 ID=mRNA_1937|Name=jgi.p|Trimin1|163427|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1326bp|location=Sequence derived from alignment at Contig_26:574284..575609- (Tribonema minus UTEX_B_3156 )back to top |