mRNA_19121 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354702
Unique NamemRNA_19121
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|354702 vs. uniprot
Match: A0A836CD47_9STRA (Translation factor GUF1 homolog, mitochondrial n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD47_9STRA)

HSP 1 Score: 1070 bits (2766), Expect = 0.000e+0
Identity = 545/545 (100.00%), Postives = 545/545 (100.00%), Query Frame = 1
Query:    1 MPQVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSKDDAG 1635
            MPQVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSKDDAG
Sbjct:    1 MPQVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSKDDAG 545          
BLAST of jgi.p|Trimin1|354702 vs. uniprot
Match: A0A836CPP8_9STRA (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPP8_9STRA)

HSP 1 Score: 1064 bits (2751), Expect = 0.000e+0
Identity = 542/543 (99.82%), Postives = 543/543 (100.00%), Query Frame = 1
Query:    7 QVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSKDDAG 1635
            +VVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSKDDAG
Sbjct:  151 EVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSKDDAG 693          
BLAST of jgi.p|Trimin1|354702 vs. uniprot
Match: D8LK14_ECTSI (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK14_ECTSI)

HSP 1 Score: 637 bits (1642), Expect = 1.030e-220
Identity = 335/551 (60.80%), Postives = 415/551 (75.32%), Query Frame = 1
Query:    7 QVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGG-----------GDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPE-EKRRGVT-QVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLS 1620
            +VVRSLS+CQGALLLVDATQGVQAQTL+T +AAQ AG+K++PVVTKIDL +A VED I S+A TFDLDP+ V+ TSAKTG+G+D VL  I++ VPPPP   D AAPLRAR++DSWYD +RGVVCLV+ VDG L E DR+   HL  G+                       TFSVQEVGLLTPAP RT +L+ GQVGY+I G++S RQ  +GDT+I+AG         PP PL +  P +  LFAS +PLD  DF +LL AVERLALNDA+++  RE S  LG GLR+GFLG+LHMEVF QRL DEF+  VL+T P VPY  +       V + NL+DWP+  K+ G+  +VLEP+V+AT+ITP +CLG+MLTLL+++RG +   K++DGERVLL YKLPWQEVV+DLHD+AK++SSGYAS  Y   +PE ADLV  +++IN + V ALSFV HR +  R GRD+A RLK+VI RQQFEVV+ A++GA+PFA+ERIPPYRKDVL+KSGK VGGGD SRK+KLLDKQK+GK RAKTVG+VQL Q AFWA+LS
Sbjct:  146 EVVRSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLKLVPVVTKIDLHHANVEDAILSVATTFDLDPDDVIPTSAKTGEGVDEVLGAIIERVPPPPRVVDPAAPLRARLVDSWYDTVRGVVCLVEVVDGCLVEQDRVVPFHLKYGSGXXXXXXXXXXXXXXXXXXTSSETFSVQEVGLLTPAPTRTGALYPGQVGYIIAGMRSTRQATMGDTIIKAGV------SPPPSPLLIIEPSKSMLFASVYPLDDGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYSAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLS 690          
BLAST of jgi.p|Trimin1|354702 vs. uniprot
Match: W7TE65_9STRA (Translation factor GUF1 homolog, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TE65_9STRA)

HSP 1 Score: 545 bits (1404), Expect = 6.440e-185
Identity = 305/551 (55.35%), Postives = 386/551 (70.05%), Query Frame = 1
Query:    7 QVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASD--EAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENS-TMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPY-IFRDRDTG--AEVE-IENLADWPEEKRRGVTQVL---EPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLI-KSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSKD 1626
            +V RSLS+CQGALLLVDATQG+QAQTL+T+  AQEA + ++PVVTK DLP+AQ +D    MA TFD+D E VL TSAKTGQG+ A+L  ++  +  P    D  APLRAR++DSWYDP RGVVCLVQ VDG + E DRIS   L +              +FSVQEVG+L P  +RT SL +GQVGY+I G++S RQ  +GDT+     +KGA++  EA   PLP F   +  LFAS +PLD  DF +L  AV +L LNDAS+ V RE S T LG GLR GFLGLLHMEVF QRL DEF  AVL+T+P VPY I   +  G  AEV+ I+ LADWP+       + L   EP+VEAT++TP   +G++ T L+++RG + D K++D + V+L Y+LPWQEVVTDLHD  K++S+GYASL Y+       DLV  E+A+N E V ALSFV HR+   R GR +A +LK VI RQ FE+ IQA++G K  ARER+ PYRKDVL+ K+GK VGGGD +RK+KLL+KQK+GK+RAK VGKV L Q AFWA++SKD
Sbjct:  157 EVSRSLSACQGALLLVDATQGIQAQTLSTYAFAQEAKLSIIPVVTKSDLPHAQTDDVTLQMATTFDMDLEDVLVTSAKTGQGVHAILPAVIDRISAPGG--DPTAPLRARLIDSWYDPTRGVVCLVQVVDGSIKENDRISAHSLAA------------FESFSVQEVGVLCPYQLRTGSLLTGQVGYVIAGMRSTRQAKMGDTIYHH--QKGAAEAAEAGVDPLPGFETAKSMLFASIYPLDTQDFDSLELAVNKLTLNDASVTVQREGSNTSLGSGLRCGFLGLLHMEVFNQRLRDEFGTAVLLTSPTVPYRIIHSQKEGETAEVKVIQTLADWPDPATTPNYRDLKIEEPVVEATILTPVTSVGAITTCLKERRGVQEDVKYLDDKNVVLTYRLPWQEVVTDLHDVVKNVSAGYASLNYKEAGYASDDLVKVELALNGEEVDALSFVCHRTKAEREGRRVALKLKNVIDRQNFEINIQAKVGRKVVARERVAPYRKDVLVTKAGKNVGGGDVTRKKKLLEKQKQGKKRAKMVGKVSLSQEAFWAVISKD 691          
BLAST of jgi.p|Trimin1|354702 vs. uniprot
Match: A0A5D6XXH5_9STRA (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH5_9STRA)

HSP 1 Score: 528 bits (1359), Expect = 3.740e-179
Identity = 284/539 (52.69%), Postives = 370/539 (68.65%), Query Frame = 1
Query:    7 QVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSK 1623
            +V RSLS+C+G LLLVD +QG+QAQTL T+ AA+E G+ V+PV+TKID+P+AQ ED+I S+++  D+DP+ VL TSAK+G GI  VL  ++  +PPPPS  D +APLR  ++DS+YD  RG+VCLV+ VDG LA GDRI + H  S              TF VQE G+L P   +T  L +GQVGY+I G+K+  +  +GDT  R        + AP  PLP F   +  +FAS +P D   F  L  A+E+L LNDAS+    E S  LG G R GFLGLLHMEVF QRL DE NM VLVTAP VPY   D  TG    +E    +PE  +     VLEP+VEA++ITP + LG +L+L +DKRG + +  +++  RV+L   +PWQEVVT+ +++ K+ISSGYA+L YR ++P+ AD+V  ++ IN +V+ ALSFV HRS   + GR L  +LKKVI RQQ+E+ IQA LG K FA+ERIPPYRKDVLIKSGKTVGGGD +RK+KLL KQK+GKRR KTV  VQL Q AFW+++SK
Sbjct:  106 EVNRSLSACEGVLLLVDCSQGIQAQTLATYYAAKERGLHVVPVLTKIDMPHAQPEDSILSLSSLLDVDPDSVLLTSAKSGAGILDVLPAVIARLPPPPS--DPSAPLRCLLVDSYYDDYRGIVCLVKVVDGSLAPGDRIVSSHQQS--------------TFEVQETGVLLPHRFKTPGLHAGQVGYIIAGMKTTTEAKVGDTFFR--------EHAPVAPLPGFQEAKSMVFASMYPTDDCSFEDLRVAIEKLTLNDASVTAQVETSGALGMGYRCGFLGLLHMEVFHQRLADEQNMQVLVTAPMVPYTLVDAATGVAEVVETPGSFPESTK--YVDVLEPIVEASIITPTEFLGPILSLAKDKRGVQTNLVYLEDGRVILTLDVPWQEVVTNFYNELKTISSGYATLNYREVEPQKADIVKVDILINGKVLDALSFVCHRSKATQDGRALCLKLKKVIDRQQYEIAIQACLGGKVFAKERIPPYRKDVLIKSGKTVGGGDATRKKKLLAKQKDGKRRMKTVSNVQLSQDAFWSVMSK 618          
BLAST of jgi.p|Trimin1|354702 vs. uniprot
Match: A0A485KYI6_9STRA (Translation factor GUF1 homolog, mitochondrial n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KYI6_9STRA)

HSP 1 Score: 516 bits (1328), Expect = 4.170e-174
Identity = 279/539 (51.76%), Postives = 369/539 (68.46%), Query Frame = 1
Query:    7 QVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSK 1623
            +V RSLS+C+G LLLVDA+QG+QAQTL T+ AA+E G+ V+PV+TKID+P+AQ E+ +  ++A  D+DPE VL TSAK+G GI+ VL+T+V  +PPP +  D AAPL+  ++DS+YD  RG+VCLV+ VDG ++ GD+I +                  T++ VQE G+L P    T+ L  GQVGY+I G+K+  +  +GDT              P  PLP F   R  +FAS +P D  +F  L TA+ +L LNDAS+    ENS  LG G R GFLGLLHMEVF QRL DE NM VLVTAP VPY   D   G    +E  AD+P+  +    QV EPMVEA+++TP D LG++L L +DKRG + +  ++D  RV L ++LPWQEVVTD +++ K+I+SGYASL YR ++P+ +D+V  ++ INT+V+ ALSFV HRS     GR L  +LK VI RQQ+E+ IQA LG K FA+ERI P+RKDVLIKSGK VGGGD +RK+KLL KQKEGK+R KTVG VQL Q+AFW+++SK
Sbjct:  133 EVSRSLSACEGVLLLVDASQGIQAQTLATYHAAKEKGLTVVPVLTKIDMPHAQPEENMLGLSALLDVDPESVLLTSAKSGIGINEVLQTVVDLLPPPVA--DRAAPLKCLLVDSYYDDYRGIVCLVKVVDGKISPGDKILSAATK--------------TSYDVQETGVLLPHRSPTQGLSGGQVGYIIAGMKTTTEAKIGDTFFHPNQ--------PVEPLPGFQEVRSMVFASMYPTDDCNFDDLRTAMGKLTLNDASVSAQVENSGALGMGFRCGFLGLLHMEVFHQRLSDEHNMQVLVTAPMVPYTIID-SKGDRTVVETPADFPDSTK--YYQVEEPMVEASILTPTDYLGAILVLAKDKRGEQTNMVYLDDNRVALTFRLPWQEVVTDFYNELKTITSGYASLNYREVEPQESDIVKVDILINTKVLDALSFVCHRSKATTAGRALCLKLKNVIDRQQYEINIQATLGGKIFAKERIAPFRKDVLIKSGKAVGGGDITRKQKLLKKQKEGKKRMKTVGNVQLSQNAFWSVMSK 644          
BLAST of jgi.p|Trimin1|354702 vs. uniprot
Match: A0A8K1C3F0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3F0_PYTOL)

HSP 1 Score: 512 bits (1318), Expect = 3.860e-172
Identity = 277/539 (51.39%), Postives = 371/539 (68.83%), Query Frame = 1
Query:    7 QVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSK 1623
            +V RSLS+C+G LLLVD +QG+QAQTL T+ AA+E G+KV+PV+TKID+P+AQ +D+I S+++  D+DP+ VL TSAK+G GID VL  ++K +PPP ++ DA  PL+  ++DS+YD  RGV+CLV+  DG +  GD+I + HL               T + VQE G+L P   +T  L +GQVGY+I G+K+  +  +GDT  R        + AP  PLP F   R  +FAS +P D   F  L +A+E+L LNDAS+   +E S  LG G R GFLGLLHMEVF QRL DE N+ VLVTAP VPY   D   G E  +E    +P+  +    ++LEPMVEA++ITP D LG++L+L +DKRG + +  +++  RV++   +PWQEVVT+ +++ K+ISSGYA+L YR I+ + AD+V  ++ IN +V+ ALSFV HRS     GR L  +LKKVI RQQ+E+ IQA LGAK FA+ERI PYRKDVL+KSGK VGGGD +RK+KLL KQKEGKRR KTV  VQL Q AFW++LSK
Sbjct:  166 EVSRSLSACEGVLLLVDCSQGIQAQTLATYYAAKERGLKVVPVLTKIDMPHAQPDDSILSLSSLLDVDPDDVLLTSAKSGIGIDDVLPAVIKRLPPPTADIDA--PLKCLLVDSYYDDYRGVICLVKVFDGSIRPGDKILSSHLK--------------TKYEVQETGVLLPHRHKTPGLHAGQVGYVIAGMKTTSEAKIGDTFYR--------EHAPVAPLPGFQEARSMVFASMYPTDECTFEDLRSAIEKLTLNDASVTAQQETSGALGMGFRCGFLGLLHMEVFHQRLSDEQNVQVLVTAPMVPYTVIDPQ-GKESVVETPGAFPDSTK--YYRILEPMVEASIITPVDYLGAILSLAKDKRGVQTNLVYLEDGRVVVTIDVPWQEVVTNFYNELKTISSGYATLNYREIEAQQADIVKVDILINGKVLDALSFVCHRSKATVEGRALCVKLKKVIDRQQYEISIQASLGAKIFAKERIAPYRKDVLVKSGKVVGGGDSTRKKKLLAKQKEGKRRMKTVSNVQLSQDAFWSVLSK 677          
BLAST of jgi.p|Trimin1|354702 vs. uniprot
Match: A0A024U4C9_9STRA (Translation factor GUF1 homolog, mitochondrial n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U4C9_9STRA)

HSP 1 Score: 510 bits (1314), Expect = 5.760e-172
Identity = 280/539 (51.95%), Postives = 368/539 (68.27%), Query Frame = 1
Query:    7 QVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSK 1623
            +V RSLS+C+G LLLVDA+QG+Q+QTL T+ AA+E G++V+PV+TKID+P+AQ E+ + S++A  D+DPE VL TSAK+G GI  VL+T+V  +PPP  E + +APL+  ++DS+YD  RG+VCLV+ VDG ++ GD+I +                  T++ VQE G+L P    T  L  GQVGY+I G+K+  +  +GDT              P  PLP F   R  +FAS +P D  +F  L TA+ +L LNDAS+    ENS  LG G R GFLGLLHMEVF QRL DE NM VLVTAP VPY   D   G E  +E  AD+PE  +    QV EPMVEA+++TP D +G++L L  DKRG + +  +++  RV L + LPWQEVVTD +++ K+I+SGYASL YR ++P+ AD+V  ++ IN +V+ ALSFV HRS     GR L  +LK VI RQQ+E+ IQA LGAK FA+ERI P+RKDVLIKSGK VGGGD +RK+KLL KQKEGK+R KTVG VQL QSAFW+++SK
Sbjct:  135 EVSRSLSACEGVLLLVDASQGIQSQTLATYHAAKEKGLQVVPVLTKIDMPHAQPEECMLSLSALLDVDPESVLLTSAKSGIGITDVLQTVVDRLPPP--EANRSAPLKCLLVDSYYDDYRGIVCLVKVVDGRISPGDKIVSAATK--------------TSYDVQETGVLLPHRSPTPGLHGGQVGYVIAGMKTTTEAKIGDTFFHPSK--------PVEPLPGFQEVRSMVFASMYPTDDCNFDDLRTAMGKLTLNDASVSTQVENSGALGMGFRCGFLGLLHMEVFHQRLADEQNMQVLVTAPMVPYKIIDAK-GNESIVETPADFPESTK--YYQVEEPMVEASILTPSDYVGAILVLTNDKRGVQTNMVYLEDGRVALTFLLPWQEVVTDFYNELKTITSGYASLNYREVEPQKADIVKVDVLINGKVLDALSFVCHRSKATAAGRALCLKLKNVIDRQQYEISIQATLGAKVFAKERIAPFRKDVLIKSGKAVGGGDITRKQKLLKKQKEGKKRMKTVGNVQLSQSAFWSVMSK 646          
BLAST of jgi.p|Trimin1|354702 vs. uniprot
Match: A0A2D4BHP8_PYTIN (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHP8_PYTIN)

HSP 1 Score: 511 bits (1315), Expect = 1.130e-171
Identity = 273/539 (50.65%), Postives = 370/539 (68.65%), Query Frame = 1
Query:    7 QVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSK 1623
            +V RSLS+C+G LLLVD +QG+QAQTL T+ AA+E G++V+PV+TKID+P+AQ ++ I S+++  DLDP+ VL TSAK+G G+  VL  ++  +PPP +  D AAPL+  ++DS+YD  RG++CLV+ VDG +  GD+I + H               +T + VQE G+L P   +T  L +GQVGY+I G+K+  +  +GDT  R        + AP  PLP F   R  +FAS +P D   F  L TA+E+L LNDAS+   +E S  LG G R GFLGLLHMEVF QRL DE N+ VLVTAP VPY   +   G E  +E  A +P+  +     +LEPMVEA++ITP + LG +L+L ++KRG + +  +++  RV+L   +PWQEVVT+ +++ K++SSGYA+L YR I+P+ AD+V  ++ IN +V+ ALSFV HRS     GR L  +LKKVI RQQ+E+ IQA LG+K FA+ERIPP+RKDVLIKSGK VGGGD +RK+KLL KQKEGKRR KTV  VQL Q AFW++LSK
Sbjct:  167 EVSRSLSACEGVLLLVDCSQGIQAQTLATYYAAKERGLRVVPVLTKIDMPHAQPDECILSLSSLLDLDPDDVLLTSAKSGIGVPDVLPAVIARLPPPTA--DPAAPLKCLLVDSYYDDYRGIICLVKIVDGTIKPGDKIVSSHQ--------------NTKYEVQETGVLLPHRHKTNGLHAGQVGYVIAGMKTTSEAKIGDTFFR--------EHAPVAPLPGFQEARSMVFASLYPTDDXTFDDLRTAIEKLTLNDASVTAQQETSGALGMGFRCGFLGLLHMEVFHQRLADEQNVQVLVTAPMVPYRVINPQ-GVESVVETPASFPDSTKYXT--ILEPMVEASIITPSEYLGGILSLTKEKRGVQKNLVYLEDGRVVLSIDVPWQEVVTNFYNELKTVSSGYATLNYREIEPQQADIVKVDILINGKVLDALSFVCHRSKATTEGRALCVKLKKVIDRQQYEISIQAALGSKVFAKERIPPFRKDVLIKSGKVVGGGDSTRKKKLLAKQKEGKRRMKTVSNVQLSQDAFWSVLSK 678          
BLAST of jgi.p|Trimin1|354702 vs. uniprot
Match: GUF1_PHYIT (Translation factor GUF1 homolog, mitochondrial n=14 Tax=Peronosporaceae TaxID=4777 RepID=GUF1_PHYIT)

HSP 1 Score: 509 bits (1311), Expect = 2.250e-171
Identity = 274/539 (50.83%), Postives = 369/539 (68.46%), Query Frame = 1
Query:    7 QVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSK 1623
            +V RSLS+C+G LLLVD +QG+QAQTL T+ AA+E  + V+PV+TKID+P+A+V+D+I S+++  D+DP+ VL TSAK+G GI+ VL  +V+ +PPP  E D AAPLR  ++DS+YD  RG VCLV+ VDG ++ GD+I + H                T   VQE GLL P   +T+ L++GQVGY+I G+KS  +  +GDT  R G    A  +A    LP F   R  +FAS +P D   F  L  A+E+L LNDAS+   +E S  LG G R GFLGLLHMEVF QRL DE  + V+VTAP VPY   D + G  + +E    +PE  +    ++LEPMVEA++ITP   LG +L L ++KRG + +  +++ ER+++   +PWQEVVT+ +++ K+ISSGYA+L YR I+P+ AD+V  ++ IN +V+ ALSFV HRS     GR L  +LK+VI RQQ+E+ IQA LG K FA+ERI PYRKDVLIKSGKTVGGGD +RK+KLL KQK+GKRR +TV  VQL Q AFW++LSK
Sbjct:  141 EVNRSLSACEGVLLLVDCSQGIQAQTLATYYAAKERNLHVVPVLTKIDMPHAEVDDSILSLSSLLDVDPDEVLLTSAKSGDGINDVLPAVVERLPPP-VECDPAAPLRCLLVDSYYDDYRGTVCLVKVVDGAISPGDKIYSAHQK--------------TKHDVQETGLLLPGRYKTKGLYAGQVGYIIAGMKSTTEAKVGDTFFREGAAS-ADLKA----LPGFQEARSMVFASMYPTDDSSFDELRVAIEKLTLNDASVTAQQETSGALGMGFRCGFLGLLHMEVFHQRLSDEQGIQVMVTAPMVPYTVIDPN-GEHLTVETPGAFPESTK--YYEILEPMVEASIITPASYLGPVLALAKEKRGVQTNLVYLEDERIIVTIDVPWQEVVTNFYNELKTISSGYATLNYREIEPQKADIVKVDLLINGKVLDALSFVCHRSRATPDGRALCQKLKRVIDRQQYEISIQAALGGKIFAKERIAPYRKDVLIKSGKTVGGGDSTRKKKLLAKQKQGKRRMRTVANVQLSQDAFWSVLSK 656          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354702 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CD47_9STRA0.000e+0100.00Translation factor GUF1 homolog, mitochondrial n=2... [more]
A0A836CPP8_9STRA0.000e+099.82Translation factor GUF1 homolog, mitochondrial n=1... [more]
D8LK14_ECTSI1.030e-22060.80Translation factor GUF1 homolog, mitochondrial n=1... [more]
W7TE65_9STRA6.440e-18555.35Translation factor GUF1 homolog, mitochondrial n=2... [more]
A0A5D6XXH5_9STRA3.740e-17952.69Translation factor GUF1 homolog, mitochondrial n=1... [more]
A0A485KYI6_9STRA4.170e-17451.76Translation factor GUF1 homolog, mitochondrial n=2... [more]
A0A8K1C3F0_PYTOL3.860e-17251.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024U4C9_9STRA5.760e-17251.95Translation factor GUF1 homolog, mitochondrial n=5... [more]
A0A2D4BHP8_PYTIN1.130e-17150.65Translation factor GUF1 homolog, mitochondrial n=1... [more]
GUF1_PHYIT2.250e-17150.83Translation factor GUF1 homolog, mitochondrial n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_426contigContig_426:650..4791 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354702|estExt_Genemark1.C_Ctg_4260001
BRITEko00000,ko00001,ko01000,ko03029
KEGG Pathwayko05134,map05134
KEGG koko:K03596,ko:K21594
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:0097367,GO:1901265,GO:1901363
DescriptionGTPase activity
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0481@1|root,KOG0462@2759|Eukaryota
Evalue7.66e-222
Seed ortholog2880.D8LK14
Hectar predicted targeting categorysignal peptide
TranscriptId355024
TrackFilteredModels1
ProteinId354702
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354702gene_19121Tribonema minus UTEX_B_3156 geneContig_426 650..4791 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354702Trimin1|354702|estExt_Genemark1.C_Ctg_4260001Tribonema minus UTEX_B_3156 polypeptideContig_426 650..4755 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_19121_1exon_19121_1Tribonema minus UTEX_B_3156 exonContig_426 650..797 +
exon_19121_2exon_19121_2Tribonema minus UTEX_B_3156 exonContig_426 1215..1348 +
exon_19121_3exon_19121_3Tribonema minus UTEX_B_3156 exonContig_426 1484..1759 +
exon_19121_4exon_19121_4Tribonema minus UTEX_B_3156 exonContig_426 2055..2620 +
exon_19121_5exon_19121_5Tribonema minus UTEX_B_3156 exonContig_426 2991..3246 +
exon_19121_6exon_19121_6Tribonema minus UTEX_B_3156 exonContig_426 3567..3675 +
exon_19121_7exon_19121_7Tribonema minus UTEX_B_3156 exonContig_426 4607..4791 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_19121CDS_19121Tribonema minus UTEX_B_3156 CDSContig_426 650..797 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_19121UTR3_19121Tribonema minus UTEX_B_3156 three_prime_UTRContig_426 4756..4791 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_19121 ID=mRNA_19121|Name=jgi.p|Trimin1|354702|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1674bp|location=Sequence derived from alignment at Contig_426:650..4791+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCAGGTGGTACGCAGCTTGTCATCATGCCAAGGCGCGCTGCTGCT
GGTGGATGCGACGCAGGGAGTACAGGCTCAAACCCTCACCACGTTCAGAG
CAGCACAGGAGGCTGGCATCAAGGTGCTGCCGGTAGTCACCAAGATAGAT
CTGCCCAACGCTCAGGTGGAGGACACGATTTTCAGCATGGCGGCGACATT
TGACCTTGATCCAGAGCACGTGCTAGCTACGTCCGCCAAGACAGGCCAGG
GCATTGATGCCGTCCTGGAAACCATCGTCAAGCACGTGCCGCCGCCTCCG
AGCGAGTGGGACGCGGCCGCCCCCCTGCGCGCGCGCGTCCTGGACAGCTG
GTACGACCCGCTGCGCGGCGTGGTGTGCCTGGTGCAGTGCGTGGACGGCG
TGCTTGCTGAGGGTGACCGCATCTCCACGTGCCACCTCATGAGCGGCGCA
GCCGCGGCGGGCGCGGGGCAGGGCGGCGGCGACACTACGTTTTCGGTGCA
GGAGGTGGGGCTGCTGACGCCTGCGCCGGTGCGCACCAGGAGCCTCTGGT
CTGGACAGGTCGGCTACATGATCGGCGGCATCAAGAGCGTGCGGCAGGTG
CTGCTCGGCGACACGGTGATCCGCGCTGGCACCAGGAAGGGGGCCTCAGA
TGAGGCGCCCCCGCCCCCCCTCCCCCTCTTTGCCCCGTGCCGCCCCAACC
TGTTTGCGTCGTGCTTCCCCCTCGACGGCGACGACTTTGCGACGCTGCTC
ACCGCGGTGGAGCGGCTGGCCCTCAACGACGCCAGCCTGCAGGTGCACAG
GGAGAACAGCACCATGCTCGGGCACGGCCTGCGCGTCGGCTTCCTGGGCC
TGCTGCACATGGAGGTCTTCAAGCAGCGCCTCGACGACGAGTTCAACATG
GCCGTGCTGGTCACGGCGCCCAACGTGCCGTACATCTTCAGGGACAGGGA
CACGGGCGCGGAGGTGGAGATTGAGAACCTGGCGGACTGGCCGGAGGAGA
AGCGTCGGGGGGTGACGCAGGTGCTGGAGCCAATGGTGGAGGCCACGGTC
ATCACGCCGGAGGACTGCCTGGGCAGCATGCTCACGCTGCTGCAGGACAA
GCGCGGGACGGAGCTTGATACCAAATTCATTGACGGCGAGCGAGTCCTGC
TCGTGTACAAGCTGCCATGGCAGGAGGTTGTCACGGACCTCCACGACAAA
GCCAAGAGCATCTCTTCAGGCTACGCGAGCCTGACATATCGGCCAATCGA
CCCTGAGCCAGCAGACCTGGTGCTGTGCGAGATGGCCATCAACACTGAAG
TTGTGGGCGCGCTGTCGTTTGTCAGCCATCGCTCCAGCGTCATGCGCCTG
GGCCGCGACCTGGCGGCGCGCTTAAAAAAGGTCATCCCGAGGCAGCAATT
TGAGGTGGTCATACAAGCGCGCCTTGGTGCCAAGCCTTTTGCACGAGAAA
GGATTCCACCTTACCGTAAAGACGTACTTATCAAGTCAGGCAAGACCGTC
GGTGGAGGCGATCCTTCAAGAAAACGCAAGCTTCTGGACAAGCAGAAGGA
AGGCAAGCGCAGAGCCAAAACTGTTGGCAAGGTGCAACTGCCACAAAGCG
CCTTCTGGGCGCTCCTCTCCAAGGATGATGCTGGATGAGCTTTGCAAGCA
CACAATGCAACAGCTGGTGCAAAT
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protein sequence of jgi.p|Trimin1|354702

>Trimin1|354702|estExt_Genemark1.C_Ctg_4260001 ID=Trimin1|354702|estExt_Genemark1.C_Ctg_4260001|Name=jgi.p|Trimin1|354702|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=546bp
MPQVVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKID
LPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPP
SEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGA
AAAGAGQGGGDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQV
LLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLL
TAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNM
AVLVTAPNVPYIFRDRDTGAEVEIENLADWPEEKRRGVTQVLEPMVEATV
ITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDK
AKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRL
GRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTV
GGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLSKDDAG*
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mRNA from alignment at Contig_426:650..4791+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_19121 ID=mRNA_19121|Name=jgi.p|Trimin1|354702|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4142bp|location=Sequence derived from alignment at Contig_426:650..4791+ (Tribonema minus UTEX_B_3156 )
ATGCCGCAGGTGGTACGCAGCTTGTCATCATGCCAAGGCGCGCTGCTGCT GGTGGATGCGACGCAGGGAGTACAGGCTCAAACCCTCACCACGTTCAGAG CAGCACAGGAGGCTGGCATCAAGGTGCTGCCGGTAGTCACCAAGATAGGT ACGGACCGACTACGGCACAATCTTGTCTATGAATGGCAATCGCAATGGCA AATGCGGCCATTTCATGCCCTGCAGTCAGTGATTGTGTGCCTTCTCAATG ACGAGATGCTCATGTTTTTGAACCACTGTTGTGAGACTGAAGTGGTTTGA TGGCAGCAAGTCCAGTGAGCCTGCTTCGTGCACAGGCCATTTGGCAACAT GCAACGCATGTTGTTTTCCCACGCTCTGGAGCACATTGTCATCAGCATGC AACAACTCAAGCTCGGAAGATTGTTTGCATTGCTTGCAGAGTGCATGCGT GTGTAACTGTCTGCAGCTCCTCCAGCACCAGGTCGTCTTGTGTGCTGCAT CACATACATAACTTACAACAACATCTGGCTTCTTGTGTGCCTGCATGTTC TGTGTGGCCTTGCAGATCTGCCCAACGCTCAGGTGGAGGACACGATTTTC AGCATGGCGGCGACATTTGACCTTGATCCAGAGCACGTGCTAGCTACGTC CGCCAAGACAGGCCAGGGCATTGATGCCGTCCTGGAAACCATCGTCAAGG TATGTAGTACGTACCGGCTCTCAGATGAATACACTTACAATACTTGCAAA TCATGCATCAACCCCCATCATGTCGCCCTGCCAGCGCTGGTCCTTCTCAC CGCCAGTGAATGTCCTTGTCGCGCTGCGCTGCAGCACGTGCCGCCGCCTC CGAGCGAGTGGGACGCGGCCGCCCCCCTGCGCGCGCGCGTCCTGGACAGC TGGTACGACCCGCTGCGCGGCGTGGTGTGCCTGGTGCAGTGCGTGGACGG CGTGCTTGCTGAGGGTGACCGCATCTCCACGTGCCACCTCATGAGCGGCG CAGCCGCGGCGGGCGCGGGGCAGGGCGGCGGCGACACTACGTTTTCGGTG CAGGAGGTGGGGCTGCTGACGCCTGCGCCGGTGCGCACCAGGAGCCTCTG GTCTGGACAGGTGAGTGGGGGGGGTTGGCGCCGAAGCACTGCGGTGATGA TGCTCGGGTAGCCCTTCATGGCGCATGGTAGCATTGTCATGGTTGAAACA GCACGTGCTAGACGTACGGTCTTGTTTGTGCATTGAACAAGTCACTGTGC TCAGCATGTGATAAAGTTGAAGTTGATAGTATCGGCAGCTTGCCGTGAGC CAGCTCAAATGCAGCACACCACAAACAGCATGACCTGATCAGTTCAGCAG GTCAAACGCACCAGCTCCTTCATGCGCACACATGCATTTGCGTCTGCACT CGCAGGTCGGCTACATGATCGGCGGCATCAAGAGCGTGCGGCAGGTGCTG CTCGGCGACACGGTGATCCGCGCTGGCACCAGGAAGGGGGCCTCAGATGA GGCGCCCCCGCCCCCCCTCCCCCTCTTTGCCCCGTGCCGCCCCAACCTGT TTGCGTCGTGCTTCCCCCTCGACGGCGACGACTTTGCGACGCTGCTCACC GCGGTGGAGCGGCTGGCCCTCAACGACGCCAGCCTGCAGGTGCACAGGGA GAACAGCACCATGCTCGGGCACGGCCTGCGCGTCGGCTTCCTGGGCCTGC TGCACATGGAGGTCTTCAAGCAGCGCCTCGACGACGAGTTCAACATGGCC GTGCTGGTCACGGCGCCCAACGTGCCGTACATCTTCAGGGACAGGGACAC GGGCGCGGAGGTGGAGATTGAGAACCTGGCGGACTGGCCGGAGGAGAAGC GTCGGGGGGTGACGCAGGTGCTGGAGCCAATGGTGGAGGCCACGGTCATC ACGCCGGAGGACTGCCTGGGCAGCATGCTCACGCTGCTGCAGGACAAGCG CGGGACGGAGCTTGATACCAAGTGAGCGACGCGCCGCCTGTGCGCAGGGC TGGTGGTGATGAAGCTGCAATGCACGGCAGTTTTGAGCTGCAAGGTGTTC TAGTCGCTGCCGAGGGTCTGCCTCGAGCGTTCAGTGCTGATGCTCGTGAA GTGCTCAGCTGCCAATGGTGCATGAAGCTTGGGCAGAGTCGCTAGGCTGT TACAGATATGACTGCATCTGGGCAGCATCAGCACTTGTGTGCTGTTTGCA CTGTTTGCAGCGCATGTTTAGGATCTGCAGCAGTCATGTTCATTAGTCTC AATTTGCTACCAAATAGCTCTGTTGCTATGATGGCCATCAAGTTGTTTCT CATCGCACCATGTACGCATCTGCAAATCCCTTATGCTGCAGATTCATTGA CGGCGAGCGAGTCCTGCTCGTGTACAAGCTGCCATGGCAGGAGGTTGTCA CGGACCTCCACGACAAAGCCAAGAGCATCTCTTCAGGCTACGCGAGCCTG ACATATCGGCCAATCGACCCTGAGCCAGCAGACCTGGTGCTGTGCGAGAT GGCCATCAACACTGAAGTTGTGGGCGCGCTGTCGTTTGTCAGCCATCGCT CCAGCGTCATGCGCCTGGGCCGCGACCTGGCGGCGCGCTTAAAAAAGGTA CGACACGATAAGGAGGCGCTGTATGTTGAGTCACCGTTGACCCATCATGC GCATATGCACACGCGGGTGCCACCACCTTTAATCATGACTGACACTTTGC GATTTGTGACCATGACAAGCTGCCACTGATAGTGCTGGTATCACCTGGTG CGCTGGTGTTCATGCGGCATTAGATGGGGACTTTGAGCTGCAATTATATA CTCAACATTTTGACATGCACACCACATTTGGTTGTAGGCTTCTTTTGAAC TGTTATGTGCCCGCCAACCATACTGGCTGTTTGCTGACCGTTGACCACTG TTTGTGCCGGCTCTCAGGTCATCCCGAGGCAGCAATTTGAGGTGGTCATA CAAGCGCGCCTTGGTGCCAAGCCTTTTGCACGAGAAAGGATTCCACCTTA CCGTAAAGACGTACTTATCAAGTCAGGTCAGTCAGCAATGTCGATTGCAA CACATTGCAGCATCTGTATACCGATGGAGTCTGCCTAAGAGGTGTGAATG GCCAAGGCTACCGCCAAAACTAAAGTCCTTGCACGAAAGACATTGCGCCA GTTGGCAGCGCCAGTTGCGCCAGCTGGCGGCCCAAGTGACTTGTGGCGCA ATGACAATACTTGCTACTTCTAGTTAGCGCAAGTGGTACTCGTTACTTGT AAGTTTACTCGCAAGTCTTGGCTTGGATCAAAGTCTTACACAGGGTTAGT CCCGACCTTGAACCCTAAGACGCACTTGAAGCCTTAAGAGTTTGCCAGTT GCGCCATGGCTAAACCAGTTTAGCGTGGCGCAAAACCTAACTTAGTTGCG CCAAGGCCGTCTGAGTGTAGGCTAGCCCTGTGAATGGCTGCTCATCACCT GCAATTGCGGTGTCTGTGACTTGAATAAAAGGATGGCATTTGGAAATGCG CGCTTTGTGGATACTTGCAAAGAAGTACCTCCAACATGGATATGAGTTCC AATATATTGTAGACGCCATCTTGCAGTGCTTTGGTCAGCTTACAAAGAGA AGGCAGCGGAACAAACTTGTGCAGATTGCCAAAACAGAACAATCGTGGTT TTGCTGTACTTGTCAATGCATTATACTTCTGAAGTATGTGACAGTGCCTG ACGATTTTAAGCAATCCGGCGATCAGTCAAGCGGGCCTTCAAGCAATTAA TAAGACAAGCCTTTCGACAAGGCTTTTGTGTACCCCTTGCACTGTAGTTT GTTGCCATGCCAGTCAGCTTGGCTCAATCAGCGTCAGCAACACATTGGAA CCAGACCTAAAACGACTCCTGTGCGTATGCGCTGACAGTGACCGTCATAC GTGACGTATTCAGTAACGATGATGCTCGTGCCGTTGTCTACTGATTCGTG TCAATAGGCAAGACCGTCGGTGGAGGCGATCCTTCAAGAAAACGCAAGCT TCTGGACAAGCAGAAGGAAGGCAAGCGCAGAGCCAAAACTGTTGGCAAGG TGCAACTGCCACAAAGCGCCTTCTGGGCGCTCCTCTCCAAGGATGATGCT GGATGAGCTTTGCAAGCACACAATGCAACAGCTGGTGCAAAT
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Coding sequence (CDS) from alignment at Contig_426:650..4791+

>mRNA_19121 ID=mRNA_19121|Name=jgi.p|Trimin1|354702|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1638bp|location=Sequence derived from alignment at Contig_426:650..4791+ (Tribonema minus UTEX_B_3156 )
ATGCCGCAGGTGGTACGCAGCTTGTCATCATGCCAAGGCGCGCTGCTGCT
GGTGGATGCGACGCAGGGAGTACAGGCTCAAACCCTCACCACGTTCAGAG
CAGCACAGGAGGCTGGCATCAAGGTGCTGCCGGTAGTCACCAAGATAGAT
CTGCCCAACGCTCAGGTGGAGGACACGATTTTCAGCATGGCGGCGACATT
TGACCTTGATCCAGAGCACGTGCTAGCTACGTCCGCCAAGACAGGCCAGG
GCATTGATGCCGTCCTGGAAACCATCGTCAAGCACGTGCCGCCGCCTCCG
AGCGAGTGGGACGCGGCCGCCCCCCTGCGCGCGCGCGTCCTGGACAGCTG
GTACGACCCGCTGCGCGGCGTGGTGTGCCTGGTGCAGTGCGTGGACGGCG
TGCTTGCTGAGGGTGACCGCATCTCCACGTGCCACCTCATGAGCGGCGCA
GCCGCGGCGGGCGCGGGGCAGGGCGGCGGCGACACTACGTTTTCGGTGCA
GGAGGTGGGGCTGCTGACGCCTGCGCCGGTGCGCACCAGGAGCCTCTGGT
CTGGACAGGTCGGCTACATGATCGGCGGCATCAAGAGCGTGCGGCAGGTG
CTGCTCGGCGACACGGTGATCCGCGCTGGCACCAGGAAGGGGGCCTCAGA
TGAGGCGCCCCCGCCCCCCCTCCCCCTCTTTGCCCCGTGCCGCCCCAACC
TGTTTGCGTCGTGCTTCCCCCTCGACGGCGACGACTTTGCGACGCTGCTC
ACCGCGGTGGAGCGGCTGGCCCTCAACGACGCCAGCCTGCAGGTGCACAG
GGAGAACAGCACCATGCTCGGGCACGGCCTGCGCGTCGGCTTCCTGGGCC
TGCTGCACATGGAGGTCTTCAAGCAGCGCCTCGACGACGAGTTCAACATG
GCCGTGCTGGTCACGGCGCCCAACGTGCCGTACATCTTCAGGGACAGGGA
CACGGGCGCGGAGGTGGAGATTGAGAACCTGGCGGACTGGCCGGAGGAGA
AGCGTCGGGGGGTGACGCAGGTGCTGGAGCCAATGGTGGAGGCCACGGTC
ATCACGCCGGAGGACTGCCTGGGCAGCATGCTCACGCTGCTGCAGGACAA
GCGCGGGACGGAGCTTGATACCAAATTCATTGACGGCGAGCGAGTCCTGC
TCGTGTACAAGCTGCCATGGCAGGAGGTTGTCACGGACCTCCACGACAAA
GCCAAGAGCATCTCTTCAGGCTACGCGAGCCTGACATATCGGCCAATCGA
CCCTGAGCCAGCAGACCTGGTGCTGTGCGAGATGGCCATCAACACTGAAG
TTGTGGGCGCGCTGTCGTTTGTCAGCCATCGCTCCAGCGTCATGCGCCTG
GGCCGCGACCTGGCGGCGCGCTTAAAAAAGGTCATCCCGAGGCAGCAATT
TGAGGTGGTCATACAAGCGCGCCTTGGTGCCAAGCCTTTTGCACGAGAAA
GGATTCCACCTTACCGTAAAGACGTACTTATCAAGTCAGGCAAGACCGTC
GGTGGAGGCGATCCTTCAAGAAAACGCAAGCTTCTGGACAAGCAGAAGGA
AGGCAAGCGCAGAGCCAAAACTGTTGGCAAGGTGCAACTGCCACAAAGCG
CCTTCTGGGCGCTCCTCTCCAAGGATGATGCTGGATGA
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