mRNA_1907 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|163480
Unique Name	mRNA_1907
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A835Z6A6_9STRA (Bro-N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A6_9STRA)

HSP 1 Score: 1030 bits (2663), Expect = 0.000e+0
Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 1

Query:    1 MDIIKTFVSDNTSYALSIYYKNNVPLFRASDIGDILGLSQVRSSIRDFDETEKVAHVVPTAGGDQQVLCLTEAGVYLLLMSSKKPIARPFRKWLCQVLKSIQAGGSYELEQQFKEQMEKEEKNMEKAIYVKVNEDLEKQKHNDILEVYDKKPLVYIARFGSINDLKIIKVGSTTDIKQRVSVHWRDFSDCTLLRVFHCSERRGFESFLHKHHDIRKYKYEEPINGKKSDEAFLLSDDKLKQLINIAVRKVSKYQVTSSAMQSLQQDVSHMKQMLEKLQSVDIAESEPQSRRGVCTVNGDKVQRYSEDGTTLIDTYFQMITVERDEHVQMLAMRFGMRLNRNSIVNTITKQHTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRVFENSEAARISVNERLQDLKQSIKTISRLCKAIKSGDMYKGRYYTSWAECSWAMQDAYMAAGGSTPFPAPSHCRPIHRSDPKTKRVLETYYSMSEVQKKRKVGKSSLQNAINGEYTLQGYLWAYAT 1575
            MDIIKTFVSDNTSYALSIYYKNNVPLFRASDIGDILGLSQVRSSIRDFDETEKVAHVVPTAGGDQQVLCLTEAGVYLLLMSSKKPIARPFRKWLCQVLKSIQAGGSYELEQQFKEQMEKEEKNMEKAIYVKVNEDLEKQKHNDILEVYDKKPLVYIARFGSINDLKIIKVGSTTDIKQRVSVHWRDFSDCTLLRVFHCSERRGFESFLHKHHDIRKYKYEEPINGKKSDEAFLLSDDKLKQLINIAVRKVSKYQVTSSAMQSLQQDVSHMKQMLEKLQSVDIAESEPQSRRGVCTVNGDKVQRYSEDGTTLIDTYFQMITVERDEHVQMLAMRFGMRLNRNSIVNTITKQHTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRVFENSEAARISVNERLQDLKQSIKTISRLCKAIKSGDMYKGRYYTSWAECSWAMQDAYMAAGGSTPFPAPSHCRPIHRSDPKTKRVLETYYSMSEVQKKRKVGKSSLQNAINGEYTLQGYLWAYAT
Sbjct:    1 MDIIKTFVSDNTSYALSIYYKNNVPLFRASDIGDILGLSQVRSSIRDFDETEKVAHVVPTAGGDQQVLCLTEAGVYLLLMSSKKPIARPFRKWLCQVLKSIQAGGSYELEQQFKEQMEKEEKNMEKAIYVKVNEDLEKQKHNDILEVYDKKPLVYIARFGSINDLKIIKVGSTTDIKQRVSVHWRDFSDCTLLRVFHCSERRGFESFLHKHHDIRKYKYEEPINGKKSDEAFLLSDDKLKQLINIAVRKVSKYQVTSSAMQSLQQDVSHMKQMLEKLQSVDIAESEPQSRRGVCTVNGDKVQRYSEDGTTLIDTYFQMITVERDEHVQMLAMRFGMRLNRNSIVNTITKQHTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRVFENSEAARISVNERLQDLKQSIKTISRLCKAIKSGDMYKGRYYTSWAECSWAMQDAYMAAGGSTPFPAPSHCRPIHRSDPKTKRVLETYYSMSEVQKKRKVGKSSLQNAINGEYTLQGYLWAYAT 525

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BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A835ZCA0_9STRA (Bro-N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCA0_9STRA)

HSP 1 Score: 586 bits (1511), Expect = 8.730e-204
Identity = 302/540 (55.93%), Postives = 387/540 (71.67%), Query Frame = 1

Query:    1 MDIIKTFVSDNTSYALSIYYKNNVPLFRASDIGDILGLSQVRSSIRDFDETEKVAHVVPTAGGDQQVLCLTEAGVYLLLMSSKKPIARPFRKWLCQVLKSIQAGGSYELEQQFKEQMEKEEKNMEKAIYVKVNEDLEKQKHNDILEVYDKKPLVYIARFGSINDLKIIKVGSTTDIKQRVSVHWRDFSDCTLLRVFHCSERRGFESFLHKHHDIRKYKYEEPINGKKSDEAFLLSDDKLKQLINIAVRKVSKYQVTSSAMQSLQQDVSHMKQMLEKLQS---------------VDIAESEPQSRRGVCTVNGDKVQRYSEDGTTLIDTYFQMITVERDEHVQMLAMRFGMRLNRNSIVNTITKQHTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRVFENSEAARISVNERLQDLK-QSIKTISRLCKAIKSGDMYKGRYYTSWAECSWAMQDAYMAAGGSTPFPA-PSHCRPIHRSDPKTKRVLETYYSMSEVQKKRKVGKSSLQNAINGEYTLQGYLWAY 1569
            MDIIKTFV +NT+Y ++I Y N  PLFRAS+IG +LG+S VR + RD+DE EKV     T GG Q V  LTE G+Y LLM S K IARPF+KW+CQVL SI+  G YE+EQQF EQ+E++E  +EKA+Y KV +D E QKH DIL+VYDKKP+VY A+FGSI D +IIK+G TTDIK R   HW DFS+C L++VF CSE +  E FLH H +I+ +KY EPING+ S+EAFL   + LK+ +NIAVR +SK++   ++M  ++ DV  + QMLEKLQ+                +  E+ P+SRRG+CTVNG K+QRYS DG TL++TY QMI +ERDE++  LAMRFG  LNRN++ N   K  TYLGFRWAML+R+LPD T+Q IG TT  P +RSGP+ EL+DD  +I +VF++S    +S+N RL D+  Q I +IS LCKAIK G  Y GR+Y +WA+C WAMQD YMAAG   P P    HCRP+++ DP T  VLETYYS ++V K+ KVGK +LQNAING+Y L G++WAY
Sbjct:    1 MDIIKTFVINNTNYDINIVYHNGFPLFRASEIGAVLGMSNVRQTTRDYDEDEKVVIQSDTPGGLQNVSMLTELGLYRLLMRSDKAIARPFQKWVCQVLASIRETGKYEMEQQFNEQLEQKEIEIEKAVYDKVLKDAELQKHLDILDVYDKKPVVYFAKFGSIGDQQIIKIGQTTDIKSRTRKHWIDFSECILIKVFPCSEPQKLEHFLHMHAEIKSFKYNEPINGQVSNEAFLFDGEALKRTLNIAVRNISKFKAVETSMAKMEGDVRSINQMLEKLQNQVQMCLQQKAPESGEANEEEATPKSRRGICTVNGYKIQRYSADGLTLLETYNQMIVMERDENLLNLAMRFGTHLNRNTVTNASKKGFTYLGFRWAMLDRSLPDDTIQTIGVTTLGPNVRSGPITELNDDMTSIAKVFQSSNDVIVSINARLLDVGLQGIDSISGLCKAIKRGKSYYGRFYMAWADCPWAMQDFYMAAGNEAPIPCIAGHCRPVNKIDPITHNVLETYYSTADVNKRCKVGKQTLQNAINGQYKLNGFIWAY 540

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BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: Q8QNG2_ESV1K (EsV-1-117 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNG2_ESV1K)

HSP 1 Score: 283 bits (723), Expect = 1.840e-85
Identity = 176/542 (32.47%), Postives = 297/542 (54.80%), Query Frame = 1

Query:    1 MDIIKTFVSDNTSYALSIYY-KNNVPLFRASDIGDILGLSQVRSSIRDFDETEKVAHVVPTAGGDQQVLCLTEAGVYLLLMSSKKPIARPFRKWLCQVLKSIQAGGSYELEQQFKEQMEKEEKNME------KAIYVKVNEDLEKQKHNDILEVYDKKPLVYIARFGSINDLKI-IKVGSTTDIKQRVSVHWRDFSDCTLLRVFHCSERRGFESFLHKHHDIRKYKYEEPINGKKSDEAFLLSDDKLKQLINIAVRKVSKYQVTSSAMQSLQQDVSHMKQMLEKL----------QSVDIAESEPQSRRGVCTVNGDKVQRYSEDGTTLIDTYFQMITVERDEHVQMLAMRFGMRLNRNSIVNTITKQHTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRVFENSEAARISVNERLQDLKQSIKTISRLCKAIKSGDMYKGRYYTSWAECSWAMQDAYMAAGGSTPFPAPSHCRPIHRSDPKTKRVLETYYSMSEVQKKRKVGKSSLQNAINGEYTLQGYLWAYA 1572
            MDI++TFV +NT + + I   +N+ PLF+ASDIG IL +  + +S+ D  + +K      T GG+Q+ + +TE GVY L+M S+KP+A+PF+ W+ +VLK+I+  G Y LE++      K  + +       K++  K  +  +++ H  +++ +D K  +Y  +  ++ D  + +K+GST +I+ R +    +F    + R+F C     FE  LHKH+DI++Y++++PINGK+S E F ++ ++L++ +NIA   V KY+      +    +   ++ +++              +D  + +P+++RG CT+ GDK+Q YS DG  L+ TY       RD      A   G++    +  + I +     G+RWA L R+ PD TVQDIG T     +R+G V  L+DDK  + +++ + +A  ++ N       Q      R  K +K G    G +  SW+E S  +QDA++        P  +    I+R DP TK VL TY +M+EV +  K+G+ +L+ AING+    G+ WAYA
Sbjct:    1 MDILQTFVFNNTRHKVVILRDENDDPLFKASDIGKILSIKNIHTSMIDLHDDDKAIRTASTPGGEQKTVFVTEKGVYKLIMRSRKPVAKPFQDWVFEVLKTIRKRGKYVLEEEIAGLKRKHAEELADADADAKSLARKYIDAEDERMHKTLVQGFDNKTCIYFGKIQTMEDNSVLVKIGSTKNIRARTTGLVNEFGSMAIFRIFECDRYEEFEKSLHKHNDIKRYRFKKPINGKRSMEVFNMTKEELQRAVNIAGSNVCKYRFDQKGFRETLFEQPEVRVLMKTNGIAINGIXINDDIDNMDVQPENKRGRCTLTGDKIQAYSTDGKELVCTYETFRDAVRDLPG---ASEVGIK---RACYDRIVRS----GYRWARLPRSQPDETVQDIGNTVIDIPIRTGHVAGLNDDKTRVEKIYPSFKACAVANNFASSGAVQK-----RSSKGVKVG----GHHIVSWSELSETIQDAWLENNTLPILPRNATSIRINRLDPVTKEVLRTYGTMNEVVRHFKIGRVALRTAINGDLVKFGFKWAYA 523

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BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: D8LPE5_ECTSI (EsV-1-117 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPE5_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 1.900e-81
Identity = 180/536 (33.58%), Postives = 283/536 (52.80%), Query Frame = 1

Query:    1 MDIIKTFVSDNTSYALSIYYKNNVPLFRASDIGDILGLSQVRSSIRDFDETEKVAHVVPTAGGDQQVLCLTEAGVYLLLMSSKKPIARPFRKWLCQVLKSIQAGGSYELEQQFKEQMEKEEKNMEKAIYVKVNEDLEKQKHNDILEVYDKKPLVYIARFGSIND-LKIIKVGSTTDIKQRVSVHWRDFSDCTLLRVFHCSERRGFESFLHKHHDIRKYKYEEPINGKKSDEAFLLSDDKLKQLINIAVRKVSKYQVTSSAMQSLQQDVSHMKQ------MLEKLQSVDIAESEPQSRRGVCTVNGDKVQRYSEDGTTLIDTYFQMITVERDEHVQMLAMRFGMRLNRNSIVNTITKQHTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRVFENSEAARISVNERLQDLKQSIKTISRLCKAIKSGDMYKGRYYTSWAECSWAMQDAYMAAGGSTPFPAPS----HCRPIHRSDPKTKRVLETYYSMSEVQKKRKVGKSSLQNAINGEYTLQGYLWAYAT 1575
            MD++KTFV DNT + + I   ++ P+F+A  IG I+GL Q+RSS+R FD  EKV   + T GG+Q    LTE G Y LLM S KP+ARPF+KW+  V+ +I+  G YEL +Q  + ++ +  N +  + +      E + H+ +L  +  K +VY  +   + D   +IK+GST +IKQRV      +   T+ RVF C E  GFE FLH+H DI++YK +   NG  S E + ++D  LK+ INIA+R V +Y+  +  ++ +++ V  + Q      + EK ++    E++  S+RG  T  G K+Q Y+EDG  L+ T+ ++I   R++  Q     F  ++ R  ++        Y G+RW  L+R L D TVQ +  T     +  G V  LS D++ +  ++ + + A                ++  L K  K GD   G     W+EC   +Q  Y        FP  +    H R + + DP TK VL  Y +++EV  K +    +L++AI     L+GYLW +A+
Sbjct:    1 MDVLKTFVFDNTEHVVDIQVVDDKPMFKADQIGKIIGLKQMRSSVRHFDRDEKVVQRMHTRGGEQDCTFLTEMGAYRLLMRSDKPMARPFQKWVAHVIATIRETGKYELSKQL-DDLKGQNDNEKADLVMHYKSQHETETHDVLLGGFANKKVVYYGKIADLEDGTSLIKIGSTANIKQRVGSLRYGYGSFTVFRVFECQEHNGFEKFLHQHVDIKRYK-KPTYNGIVSTETYAMNDGDLKRAINIAIRNVVQYRRDTEQIRDIKEIVEDVVQAEVAKVLGEKRKARVSEEAQHDSKRGHNTTLGSKIQIYAEDGG-LVKTFNRLIDTLRNDQWQ-----FDEKVYRAGVLKACEGDFIYAGYRWMQLDRNLDDDTVQQLRPTILKKNIHKGWVALLSSDESEVAELYPDFKTAAEQ---------NGFLSLGALQKRRKKGDKIHGHVIRPWSECGDELQKLYRGT-----FPDKTIGGKHIR-VLKMDPVTKEVLHEYETINEVMAKIRCAHRTLKSAIAKGVELRGYLWKFAS 513

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BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A835Z9N5_9STRA (BRO family, N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N5_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.190e-75
Identity = 182/544 (33.46%), Postives = 279/544 (51.29%), Query Frame = 1

Query:    1 MDIIKTFVSDNTSYALSIYYKNNVPLFRASDIGDILGLSQVRSSIRDFDETEKVAHVVPTAGGDQQVLCLTEAGVYLLLMSSKKPIARPFRKWLCQVLKSIQAGGSYEL-----EQQFKEQMEKEEKNMEKAIYVKVNEDLEKQKHNDILEVYDKKPLVYIARFGSINDLKIIKVGSTTDIKQRVSVHWRDFSDC-TLLRVFHCSERRGFESFLHKHHDIRKYKYEEPI-NGKKSDEAFLLSDDKLKQLINIAVRKVSKYQVTSSAMQSLQQDVSHMKQMLEKL---QSVDIAE--------SEPQSRRGVCTVNGDKVQRYSEDGTTLIDTYFQMITVERDEHVQMLAMRFGMRLNRNSIVNTITKQHTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRVFENSEAARISVNERLQDLKQSIKTISRLCKAIKSGDMY--KGRYYTSWAECSWAMQDAYMAAGGSTPFPAPSHCRPIHRSDPKTKRVLETYYSMSEVQKKRKVGKSSLQNAINGEYTLQGYLWAYA 1572
            MD +K F+ D+ +Y + I  ++  PLFRA D+G +LGLS V  +IRDFD+ E       TA G + V  LTE G Y L+M S KPIARPF+KW+C V+ +I   G Y+      E + KE M   E  + +    K  E+L  + HN   E ++   +VY+ +     D  ++K+GST+ +KQR     R++    T+  VF  S    FE F+  HH ++K++Y E I +GKKS E FLL DD +  L+NI  +   ++         + +++ H+   ++ L     V++ E        +E  +        G+K+QRYS DG TL+ TY Q+    RD  +          ++ +S+ N I     Y GFRWA LNR LPD TVQ++  TTP    ++G + ELS DKA++++V+ N    R +V E L       ++++     +++G+     G YY  W E S    +  M+  G  P    +H   I + DP T  V+  + S   V  K  V   +LQ+AING+  L+ + W  A
Sbjct:    1 MDFLKNFMFDDCAYEVRIIEQDGKPLFRAGDVGKVLGLSNVPHAIRDFDDDESTIVKSDTAFGPKMVNFLTEVGAYRLVMRSNKPIARPFQKWVCSVIATIHETGKYDAVILAKEAELKEAMHSAEAAVARDF--KAKEEL--RMHNMFTEAHEGCSVVYLGKICRKGDATLVKIGSTSTLKQRCKTLTREYGGSFTVFEVFPVSRNLEFERFMQLHHKLKKHRYREDIVDGKKSTEVFLLDDDTISLLVNIGRKNAPRF-----VKGKVHEELLHLHAKVDALADAMGVELPEKDSAPSGLAEHDTGEAGEKAIGNKIQRYSADGKTLLHTYSQLCKATRDTTLPE-------SVSASSLRNAIYDGCAYKGFRWAYLNRDLPDDTVQELKETTPSKKYKTGLIAELSADKASVLKVYRN----RSTVAEGL-----GYQSVTSFFTQMEAGNAVGKAGLYYQPWDELS---NELRMSYDGDLPNAKQNHATEIEQLDPVTGAVVARHGSQEHVCAKIAVSLRTLQSAINGDLVLREFKWRVA 516

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BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: D7G323_ECTSI (EsV-1-117 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G323_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 3.890e-72
Identity = 163/475 (34.32%), Postives = 252/475 (53.05%), Query Frame = 1

Query:    1 MDIIKTFVSDNTSYALSIYYKNNVPLFRASDIGDILGLSQVRSSIRDFDETEKVAHVVPTAGGDQQVLCLTEAGVYLLLMSSKKPIARPFRKWLCQVLKSIQAGGSYELEQQFKEQMEKEEKNMEKAIYVKVNEDLEKQKHNDILEVYDKKPLVYIARFGSINDLK-IIKVGSTTDIKQRVSVHWRDFSDCTLLRVFHCSERRGFESFLHKHHDIRKYKYEEPI-NGKKSDEAFLLSDDKLKQLINIAVRKVSKYQVTSSAMQSLQ---QDVSHM---KQMLEKLQSVDIAESEPQSRRGVCTVNGDKVQRYSEDGTTLIDTYFQMITVERDEHVQMLAMRFGMRLNRNSIVNTITKQHTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRVFENSEAARISVNERLQDLKQSIKTISRLCKAIKSGDMYKGRYYTSWAECSWAMQDAYMAAGGSTPFP 1401
            MD++KTFV DNT Y + I   +  P+FRA  +G I+GL ++RSSI+ FD+ EKV   + T GG Q    LTE GVY LLM S KPIARPF+KW+  V+ +I+  G YEL +Q  + ++++  N +  + +      E + H+ +L  ++ K LVY  +   I D K +IK+G T +I+QRV      +   T+ RVF C E   FE FLH+H DI++Y+  +PI NGK S E + ++ ++LK+ I IA+R V +Y+  +  ++ ++   +DV      K   EK ++    E + +S+RG  T  G K+Q Y+EDG  L+ T+ ++I   RD+       +F  ++ R  +V        Y G+RW  L+R L D TVQ +  T     +  G V  LS D++ +  ++ + + A                +   L K    GD   G     W+EC   +Q +Y       PFP
Sbjct:    1 MDVLKTFVFDNTQYDVDIQIVDGKPIFRADKLGKIIGLKKIRSSIQHFDQDEKVVQPIDTRGGHQDCTFLTEMGVYRLLMRSDKPIARPFQKWVAHVIATIRETGKYELSKQL-DDLKRQNDNEKADLLMHYKSQQEMETHSVLLGGFENKKLVYYGKIADIEDGKSLIKIGPTGNIRQRVGSLRNGYGSFTVFRVFECQEHDRFERFLHQHVDIKRYR--KPIYNGKVSMETYAMNGEELKKAIGIAIRNVVQYRRDTEQIRDIKDIAEDVVQAEVAKVFGEKRKTRGSEEVQQESKRGHNTSLGPKIQIYTEDGN-LVKTFNRLIDTLRDDQ-----WKFDEKIYRAGVVKACEGDFIYAGYRWMKLDRNLDDGTVQQLRPTILKKNIHKGRVALLSSDESEVAELYPDFKTAAEQ---------NGFLSTGALQKRRNKGDKIHGHVIRPWSECGDELQKSYRG-----PFP 452

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BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A6G6XPE9_9VIRU (BRO N-terminal domain containing protein n=1 Tax=Dishui Lake large algae virus 1 TaxID=2704073 RepID=A0A6G6XPE9_9VIRU)

HSP 1 Score: 245 bits (626), Expect = 4.160e-71
Identity = 177/553 (32.01%), Postives = 292/553 (52.80%), Query Frame = 1

Query:    1 MDIIKTFVSDNTSYALSIYYKNNVPLFRASDIGDILGLSQVRSSIRDFDETEKVAHVVPTAGGDQQVLCLTEAGVYLLLMSSKKPIARPFRKWLCQVLKSIQAGGSYELEQQFKEQMEKEEKNMEKAIY---VKVNEDLEKQKHNDILEVYDKKPLVYIARFGSINDLK-IIKVGSTTDIKQRVSVHWRDFSDCTLLRVFHCSERRGFESFLHKHHDIRKYKYEEPIN-GKKS-DEAFLLSDDKLKQLINIAVRKVSKY-------QVTSSAMQSLQQDVSHMKQMLEKLQSVDIAESEPQSRRG--VCTVN--------------GDKVQRYSEDGTTLIDTYFQMITVERDEHVQMLAMRFGMRLNRNSIVNTITKQHTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRVFENSEAARISVNERLQDLKQSIKTISRLCKAIKSGDMYKGRYYTSWAECSWAMQDAYMAAGGSTPFPAPSHCRPIHRSDPKTKRVLETYYSMSEVQKKRKVGKSSLQNAINGEYTLQGYLWAYA 1572
            MDI+K FV D T + ++I ++N+ PLFRA +IGD+LG+ +VR+SI  F++ EKV   V T GG Q  L LTE GVY LL +S+KP ARPF++W+  V+KSI+  G YELE+         EK ++KA+     K   ++E  +H  ++E +  + +VY  +   + D K ++K+GST DI  R+    RD+    L  V   +  R FE +L  H +I  Y Y+  I+ GK+S  E FL+++ +++++++IA +   K+       ++       LQ   + ++++  K ++    E+E ++ +   V TV               G K+QRYS DG  LI TY       RDE +   + + G+R       + I ++  Y G+RWA L+R L D   QDIG T     +R G V  LS DK  IV VF + +AA        +D  +     + +  AIK+G    G Y+  W +    +Q +Y+            + + I + +P + +++  + S +++ K  ++ ++SL+ A++  Y L+GY+W YA
Sbjct:    1 MDILKAFVLDGTEHKINILWENDEPLFRAKEIGDVLGIVKVRTSIVSFNDREKVDRTVATLGGLQGALFLTERGVYKLLSNSRKPAARPFQEWVYDVIKSIRQTGKYELEKLV-------EKGIQKALEDEAAKYKREVELARHQSLIEAFRNRSVVYFGKIKEMPDAKCLVKIGSTDDIFNRLFSLNRDYGSVVLFHVIEVAMNRKFEEYLQIHRNISCYVYKGEIHQGKRSIREVFLMTNTEIEKMLSIAKKNTYKFTTDVYTDKMIELKRMELQNTEARIREIELKRETSKNXENEDEAEKSDDVTTVTVDIGYHERNYTQGRGSKIQRYSPDGKHLIQTYPGTAEATRDETLDAPSGK-GIR-------DAIKRRSIYKGYRWAALSRDLIDDIHQDIGDTMKIQEVRKGFVAMLSLDKKQIVNVFCDQKAAA-------ED--RQFSGGAAISSAIKNGTKSGGHYFQMWHDVIPELQMSYLGNNTLPKKRIAVNAQLIEQIEPISGKIIARFASAADITKTIRISRNSLKTALDHRYILKGYIWRYA 529

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BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A6C0EC65_9ZZZZ (T5orf172 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EC65_9ZZZZ)

HSP 1 Score: 190 bits (482), Expect = 4.390e-51
Identity = 134/460 (29.13%), Postives = 242/460 (52.61%), Query Frame = 1

Query:  238 MSSKKPIARPFRKWLCQVLKSIQAGGSYELEQQFKEQMEKEEKNMEKAIYVKVN---EDLEKQKHNDILEVYDKKPLVYIARFGSINDLKIIKVGSTTDIKQRVSVHWRDFSDCTLLRVFHCSERRGFESFLHKHHDIRKYKYEEPINGKKSDEAFLLSDDKLKQLINIAVRKVSKYQVTSSAMQSLQQDVSHMKQML-----EKLQSVDIAESEPQ----------SRRGVCTVNGDKVQRYSEDGTTLIDTYFQMITVERDEHVQMLAMRFGMRLNRNSIVNTITKQHTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRVFENSEAARISVNERLQDLKQSIKTISRLCKAIKSGDMYKGRYYTSWAECSWAMQDAYMAAGGSTPFPAPSHCRPIHRSDPKTKRVLETYYSMSEVQKKRKVGKSSLQNAINGEYTLQGYLW 1563
            M S+KPIA+ F+KWL +V+K+I+  G YELE +  E  +    N+E A+ ++ N   E ++K ++N +++ +  + ++YIA+    N+  +IK+GST +I+ RV    ++++   ++++F C     FE FLHKH +I KYK  E  N   S+E FL++ ++L ++I I +    K+  T+   Q +  ++ ++K M      ++L+ +++  +E +            R      G+K+QRYS DG TLI TY       RD+ +  +     M ++R SI N I K   Y  FRW  L+R L D T QDIG T    T++ G +  L+ DK  I++VF + +AA        +D K +  + + +  AIK   +  G Y+  W +C   ++  Y+            + + I +  P TK +++++ S  ++ K+ K+ + ++ +A   +   +G+ W
Sbjct:    1 MQSRKPIAKSFQKWLYKVIKNIRETGKYELEMKLNESND----NIENALKLEANKMKEIIDKNQNNALVDAFKDRYVIYIAKIKEKNNKILIKIGSTKEIQNRVKTLEKEYNTFNIIKIFECPRNEAFEKFLHKHPNIIKYKNHEYNN---SNELFLVTQEELDKIIQIGIHNKFKFSSTTDNDQII--EIENIKLMQIEAQNKQLELLNVTNNEDKLYIDPIILLNDNRKHTQQRGNKIQRYSSDGKTLIKTYESYAYAIRDKDLSNI-----MSISRVSIKNAIDKNLLYKNFRWMELDRKLDDDTFQDIGETIISKTVKIGFIAMLNLDKNKIIKVFCDQKAAG-------EDRKFT--SSASIANAIKRKSLSSGHYFMMWDDCDDYLKKKYLEENILPNKRVAINGKEIQQLHPITKNLIKSFSSCEDIIKEFKLSRKTIISACEFDLICKGFKW 437

[Close]

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A1Y1IVL9_KLENI (BRO N-terminal domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVL9_KLENI)

HSP 1 Score: 188 bits (478), Expect = 5.770e-50
Identity = 156/539 (28.94%), Postives = 247/539 (45.83%), Query Frame = 1

Query:    1 MDIIKTFVSDNTSYALSIYYKNNVPLFRASDIGDILGLSQVRSSIRDFDETEKVAHVVPTAGGD-QQVLCLTEAGVYLLLMSSKKPIARPFRKWLCQVLKSIQAGGSYELEQQFKEQMEKEEKNMEKAIYVKVNEDLEKQ-----------KHNDILEVYDKKP-LVYIARFGSINDLK-IIKVGSTTDIKQRVSVHWRDFSDCTLLRVFHCSERRGFESFLHKHHDIRKYKYEEPINGKKSDEAFLLSDDKLKQLINIAVRKVSKYQVTSSAMQSLQQDVSHMKQMLEKLQSVDIAES----EPQSRRGVCTVNGDKVQRYSEDGTTLIDTYFQMITVERDEHVQMLAMRFGMRLNRNSIVNTITKQHTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRVFENSEAARISVNERLQDLKQSIKTISRLCKAIKSGDMYKGRYYTSWAECSWAMQDAYMAAGGSTPFPAPSHCRPIHRSDPKTKRVLETYYSMSEVQKKRKVGKSSLQNAINGEYTLQGYLW 1563
            +D++K FV D TSY + I +    P+F+A+DIG +LG++   ++++ +DE E V ++V    G  Q+   LTE G+Y LLM S+KP ARPF+KW+ QV+++I+  G Y+LE    E  E   +  E A   K+ E L +Q           +H  ++  + K   LVY  +     D K +IK+GST D+K R     ++F    +  VF  ++R                 ++   N + +           KQL+ + + +       +S +QS              L   ++ E      P   R      GDK+QRYS DG  L+ TY       R           G     N I   I K+  Y GFRWA L+R LPD TVQDIG T    T + G +  ++ D++ IV+VF +       + E  +D  +    ++ +  AIK G    G Y+  W EC   ++  Y++          S+   I +    T  VL+ + S+  VQ   ++ ++SL+ A+     L+GY W
Sbjct:    5 LDVLKAFVMDGTSYKVDILWDGMRPMFKANDIGTVLGMTNFHATLKSYDEDEMVLNIVRDQRGSMQETTYLTERGLYRLLMQSRKPAARPFQKWVVQVIETIRQKGHYDLEAAVYEAKEAT-RLAEAAAAQKIEELLVEQAKISKAATDAARHTTLINAFKKGDCLVYFGKIRDEPDSKSLIKIGSTKDLKDRTVGLEKEFGSMQIFEVFQIAKR-----------------HQTAYNDRATT----------KQLVELELLRYK-----NSLLQS-------------NLTGTEVKEPIPYYTPPDDRRYTQRRGDKIQRYSSDGKQLLATYPGCAEAARQAE--------GAAPAGNLIRIAINKRTVYKGFRWAKLDRTLPDDTVQDIGETVISRTSKKGFLAMIALDRSHIVKVFAD-------MKEAAED--RQFSGMAAISTAIKKGTKSGGHYFCPWYECGEQLRSEYLSRCTLPEERVRSNGMMIEQIHALTNDVLKRFASIQSVQTTMRIARASLKRALEEGSILKGYKW 480

[Close]

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A6C0LB82_9ZZZZ (Bro-N domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LB82_9ZZZZ)

HSP 1 Score: 185 bits (469), Expect = 2.930e-48
Identity = 148/502 (29.48%), Postives = 247/502 (49.20%), Query Frame = 1

Query:    1 MDIIKTFVSDNTSYALSIYYKNNVPLFRASDIGDILGLSQVRSSIRDFDETEKVAHVVPTAGGDQQVLCLTEAGVYLLLMSSKKPIARPFRKWLCQVLKSIQAGGSYELEQQFKE------QMEKEEKNMEKAIYVKVNEDLEKQKHNDIL-EVYDKKPLVYIARFGSI-NDLKIIKVG-STTDIKQRVSVHWRDFSDCTLLRVFHCSERRGFESFLHKHHDIRKYKYEEPINGKKSDEAFLLSDD------------KLKQLINIAVRKVS-KYQVTSSAM----QSLQQDVSHMKQMLE--KLQSVDIAESEPQSRRGVCTVNGDKVQRYSEDGTTLIDTYFQMITVERDEHVQML--------AMRFGMRLNRNSIVNTITKQHTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRVFENSEAARISVNERLQDLKQSIKTISRLCKAIKSGDMYKGRYYTSWAECSWAMQDAYMAAGGSTPF 1398
            M+++K F S+N    + I      PLFRASDIG+IL ++ +RS+I+ FDETEKV H + T GG QQV  LTE G+Y +L  S+KPIA  F+ W+C+V+K I+  G Y L+++  +      Q E+  KN EK I  K+ +D E +KHN +L E      +VYI +  S  N   +IK+G S   I+ R + H  ++ +  +L  F     + FESF+H H+DI+  + ++    + ++E FL+  +             +KQ   I    ++ K +   +A+    Q L +D + + Q+LE  KL    I   E  ++  +  +N  + +  +  G  L  T    +     E +Q+L         M     + R SI   I +   Y GFRWA ++RAL  + V+D+  T        G + +L+ DK  I+ V+ + + A +S            ++ S L   +++  +  G YY  + +C   +++ ++      P 
Sbjct:    1 MEVVKAFNSNNLHTEIIIKGTCETPLFRASDIGEILEINNIRSAIQQFDETEKVVHSMNTPGGIQQVTFLTEKGLYKILFKSRKPIAEQFQNWVCEVVKEIRLSGQYSLKRELDQLKNTLTQSEQINKNSEKTIE-KLKKDKELEKHNLLLREFASAGAIVYIIKVKSYENGEYVIKIGESRRGIEARYNEHKSNYEESLILDCFSVKRSKDFESFIHNHNDIKFNQVKDLPGHENANELFLIGKNLTYGILYNIIKTNIKQFDEIDYNSMNLKLETIMNALTNQPQQLLEDKNTINQLLETQKLLLQKITNLEKSNKDILEKLNSSQTRTTTNFGNPL-PTLGPRLQKINPETLQLLKVYESVTECMNENANIKRPSINKAIEENTVYCGFRWAFVDRALDPNIVRDLQPTRETKIQNLGYIAKLNPDKTEILNVYLDRKTAAMS---------NGYESNSALDNPVRNNSISNGHYYMLYEKCDDELKEEFVNRNNGEPL 491

[Close]

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A835Z1N3_9STRA (Cytochrome c oxidase subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N3_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.740e-59
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1

Query:    1 VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWHLTHVLFMVQHVLIIVQFKISSPFIKRRMPMLLILRHKSQCVNILLKKTLYAYVCCN 276
            VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWHLTHVLFMVQHVLIIVQFKISSPFIKRRMPMLLILRHKSQCVNILLKKTLYAYVCCN
Sbjct:    1 VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWHLTHVLFMVQHVLIIVQFKISSPFIKRRMPMLLILRHKSQCVNILLKKTLYAYVCCN 92

[Close]

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A836CE11_9STRA (Cytochrome c oxidase subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE11_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 6.310e-19
Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = 1

Query:    1 VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWHLTHVLFMVQHVLI 147
            VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWH   V+++   V I
Sbjct:   41 VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWHFVDVVWLFLFVCI 89

[Close]

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: D3X9C7_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=2 Tax=Ectocarpales TaxID=2877 RepID=D3X9C7_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.390e-13
Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 1

Query:    1 VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWH 108
            VIIGT+F+GVC++RLY++HFSR HHFGFEAAAWYWH
Sbjct:  135 VIIGTIFLGVCTIRLYLSHFSRQHHFGFEAAAWYWH 170

[Close]

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A2P1G7I4_9CHLO (Cytochrome c oxidase subunit 3 n=2 Tax=Prototheca zopfii TaxID=3112 RepID=A0A2P1G7I4_9CHLO)

HSP 1 Score: 72.8 bits (177), Expect = 2.240e-13
Identity = 28/43 (65.12%), Postives = 39/43 (90.70%), Query Frame = 1

Query:    1 VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWHLTHVLFM 129
            VIIGT+F+ +C++R+Y+NHFS GHHFGFEAAAWYWH+  V+++
Sbjct:  213 VIIGTIFLAICAVRVYLNHFSSGHHFGFEAAAWYWHMVDVVWL 255

[Close]

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A2U9IZF1_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=20 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A2U9IZF1_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.670e-13
Identity = 29/41 (70.73%), Postives = 35/41 (85.37%), Query Frame = 1

Query:    1 VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWHLTHVL 123
            VIIGT+F+ +C++RLY NHFSR HHFGFEAAAWYWH   V+
Sbjct:  147 VIIGTIFLAICTIRLYFNHFSRQHHFGFEAAAWYWHFVDVV 187

[Close]

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A4Y5T8S8_9PHAE (Cytochrome c oxidase subunit 3 n=57 Tax=Dictyotaceae TaxID=2874 RepID=A0A4Y5T8S8_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 4.390e-13
Identity = 28/44 (63.64%), Postives = 39/44 (88.64%), Query Frame = 1

Query:    1 VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWHLTHVLFMV 132
            VIIGT+F+ +C++RLY++HFSR HHFGFEAAAWYWH   V++++
Sbjct:  215 VIIGTIFLSICAVRLYVDHFSRQHHFGFEAAAWYWHFVDVVWLI 258

[Close]

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: UPI0018EB1A7E (cytochrome c oxidase subunit 3 n=1 Tax=Paenibacillus roseus TaxID=2798579 RepID=UPI0018EB1A7E)

HSP 1 Score: 71.2 bits (173), Expect = 8.240e-13
Identity = 28/43 (65.12%), Postives = 39/43 (90.70%), Query Frame = 1

Query:    1 VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWHLTHVLFM 129
            VIIGT+F+ VC++R+Y+ HFS+GHHFGFEAAAWYWH+  V+++
Sbjct:  211 VIIGTIFLFVCTIRVYLGHFSKGHHFGFEAAAWYWHMVDVVWL 253

[Close]

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: A0A3G1GQ31_9CUCU (Cytochrome c oxidase subunit 3 n=1 Tax=Stylosomus rugithorax TaxID=1425630 RepID=A0A3G1GQ31_9CUCU)

HSP 1 Score: 70.9 bits (172), Expect = 1.070e-12
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 1

Query:    1 VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWHLTHVLFMVQHV 141
            VIIGT F+GVC +RLY+NHFS  HHFGFEAAAWYWH   V+++  ++
Sbjct:  206 VIIGTTFLGVCLIRLYMNHFSNIHHFGFEAAAWYWHFVDVVWLFLYI 252

[Close]

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: D3X9E6_SCYLO (Cytochrome c oxidase subunit 3 (Fragment) n=18 Tax=Scytosiphon TaxID=27966 RepID=D3X9E6_SCYLO)

HSP 1 Score: 69.3 bits (168), Expect = 1.390e-12
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 1

Query:    1 VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWHLTHVLFM 129
            VIIGT+F+ +C+ RLY +HFSR HHFGFEAAAWYWH   V+++
Sbjct:  138 VIIGTIFLAICTFRLYFDHFSRQHHFGFEAAAWYWHFVDVVWL 180

[Close]

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Match: D3X9C2_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=3 Tax=Colpomenia peregrina TaxID=27965 RepID=D3X9C2_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.530e-12
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 1

Query:    1 VIIGTLFIGVCSLRLYINHFSRGHHFGFEAAAWYWH 108
            VIIGT+F+ +C+LRLY +HFSR HHFGFEAAAWYWH
Sbjct:  135 VIIGTIFLAICTLRLYFDHFSRQHHFGFEAAAWYWH 170

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|163480 vs. uniprot
BLAST of jgi.p|Trimin1|163480 vs. uniprot

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z6A6_9STRA	0.000e+0	100.00	Bro-N domain-containing protein n=1 Tax=Tribonema ...	[more]
A0A835ZCA0_9STRA	8.730e-204	55.93	Bro-N domain-containing protein n=1 Tax=Tribonema ...	[more]
Q8QNG2_ESV1K	1.840e-85	32.47	EsV-1-117 n=1 Tax=Ectocarpus siliculosus virus 1 (...	[more]
D8LPE5_ECTSI	1.900e-81	33.58	EsV-1-117 n=1 Tax=Ectocarpus siliculosus TaxID=288...	[more]
A0A835Z9N5_9STRA	1.190e-75	33.46	BRO family, N-terminal domain-containing protein n...	[more]
D7G323_ECTSI	3.890e-72	34.32	EsV-1-117 n=1 Tax=Ectocarpus siliculosus TaxID=288...	[more]
A0A6G6XPE9_9VIRU	4.160e-71	32.01	BRO N-terminal domain containing protein n=1 Tax=D...	[more]
A0A6C0EC65_9ZZZZ	4.390e-51	29.13	T5orf172 domain-containing protein n=1 Tax=viral m...	[more]
A0A1Y1IVL9_KLENI	5.770e-50	28.94	BRO N-terminal domain containing protein n=1 Tax=K...	[more]
A0A6C0LB82_9ZZZZ	2.930e-48	29.48	Bro-N domain-containing protein n=1 Tax=viral meta...	[more]

Pages

BLAST of jgi.p|Trimin1|163480 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z1N3_9STRA	1.740e-59	100.00	Cytochrome c oxidase subunit 3 n=1 Tax=Tribonema m...	[more]
A0A836CE11_9STRA	6.310e-19	79.59	Cytochrome c oxidase subunit 3 n=1 Tax=Tribonema m...	[more]
D3X9C7_9PHAE	1.390e-13	80.56	Cytochrome c oxidase subunit 3 (Fragment) n=2 Tax=...	[more]
A0A2P1G7I4_9CHLO	2.240e-13	65.12	Cytochrome c oxidase subunit 3 n=2 Tax=Prototheca ...	[more]
A0A2U9IZF1_9PHAE	2.670e-13	70.73	Cytochrome c oxidase subunit 3 (Fragment) n=20 Tax...	[more]
A0A4Y5T8S8_9PHAE	4.390e-13	63.64	Cytochrome c oxidase subunit 3 n=57 Tax=Dictyotace...	[more]
UPI0018EB1A7E	8.240e-13	65.12	cytochrome c oxidase subunit 3 n=1 Tax=Paenibacill...	[more]
A0A3G1GQ31_9CUCU	1.070e-12	63.83	Cytochrome c oxidase subunit 3 n=1 Tax=Stylosomus ...	[more]
D3X9E6_SCYLO	1.390e-12	65.12	Cytochrome c oxidase subunit 3 (Fragment) n=18 Tax...	[more]
D3X9C2_9PHAE	1.530e-12	77.78	Cytochrome c oxidase subunit 3 (Fragment) n=3 Tax=...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_26	contig	Contig_26:473239..475002 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|163480\|e_gw1.26.202.1
Description	DNA binding
COG category	S
Max annot lvl	10239\|Viruses
EggNOG OGs	4QAPV@10239\|Viruses,4QV7H@35237\|dsDNA viruses no RNA stage
Evalue	3.01e-86
Seed ortholog	654926.Q8QNG2_ESV1K
Hectar predicted targeting category	other localisation
TranscriptId	163802
Track	FilteredModels1
ProteinId	163480

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|163480	gene_1907	Tribonema minus UTEX_B_3156	gene	Contig_26 473239..475002 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_1907_1	exon_1907_1	Tribonema minus UTEX_B_3156	exon	Contig_26 473239..474078 +
exon_1907_2	exon_1907_2	Tribonema minus UTEX_B_3156	exon	Contig_26 474265..475002 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_1907	CDS_1907	Tribonema minus UTEX_B_3156	CDS	Contig_26 473239..474078 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|163480	Trimin1\|163480\|e_gw1.26.202.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_26 473239..475002 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_26:473239..475002+
coding sequence from alignment at Contig_26:473239..475002+

spliced messenger RNA

>mRNA_1907 ID=mRNA_1907|Name=jgi.p|Trimin1|163480|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1578bp|location=Sequence derived from alignment at Contig_26:473239..475002+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACATAATCAAGACATTTGTGAGCGACAACACCAGCTACGCCCTAAG
CATATACTACAAGAACAATGTTCCCCTCTTCAGGGCCTCAGATATCGGAG
ACATCCTGGGCCTGAGTCAGGTGAGGTCGAGCATTCGAGACTTTGATGAG
ACTGAAAAGGTTGCACATGTAGTGCCAACTGCCGGCGGGGATCAACAAGT
TCTGTGCCTGACAGAAGCTGGTGTGTACTTGCTGTTGATGAGCTCAAAGA
AGCCTATAGCACGACCGTTTCGGAAGTGGTTGTGTCAAGTACTAAAGTCA
ATACAGGCTGGCGGCAGTTATGAGCTGGAACAGCAATTCAAAGAGCAGAT
GGAGAAAGAAGAGAAAAACATGGAAAAGGCAATATATGTCAAGGTGAATG
AGGATCTTGAGAAGCAGAAGCACAATGACATCCTTGAGGTGTATGACAAA
AAGCCCCTTGTCTACATTGCCAGGTTTGGGTCAATCAATGACCTTAAGAT
CATCAAAGTCGGCTCGACAACGGACATCAAGCAGAGGGTGAGCGTCCACT
GGAGAGACTTCTCGGACTGCACTCTATTGAGGGTTTTCCATTGTTCTGAA
CGCAGAGGTTTTGAAAGCTTCCTTCATAAGCATCATGACATCCGCAAGTA
CAAGTATGAAGAGCCGATCAACGGGAAGAAGTCGGACGAGGCTTTCCTTC
TCAGTGATGACAAACTCAAGCAGCTGATAAACATAGCAGTTCGGAAAGTA
TCCAAGTATCAGGTGACATCATCAGCCATGCAAAGCCTGCAGCAAGACGT
CTCACACATGAAGCAGATGCTGGAGAAGCTCCAGAGTGTTGATATTGCAG
AAAGTGAGCCTCAGAGCCGGCGCGGCGTATGCACAGTGAACGGAGATAAG
GTCCAGCGTTACTCAGAAGATGGCACAACACTGATCGACACATACTTTCA
GATGATCACTGTGGAGAGGGATGAGCATGTGCAAATGTTGGCAATGAGGT
TTGGCATGCGCCTGAATCGGAACAGCATTGTCAATACCATCACGAAACAA
CACACGTACTTGGGGTTTCGTTGGGCGATGCTGAACCGTGCGCTGCCCGA
TCATACAGTGCAGGACATTGGTACCACTACTCCACCCCCAACACTTCGAA
GCGGTCCAGTCGTAGAACTCAGTGACGATAAAGCCACCATTGTGCGTGTC
TTTGAGAACAGCGAAGCTGCCCGCATATCAGTCAATGAACGCCTACAGGA
CCTCAAGCAGTCAATCAAGACCATTTCCAGACTTTGCAAGGCCATCAAGA
GTGGTGACATGTACAAGGGGCGTTACTATACCTCATGGGCTGAATGCTCC
TGGGCTATGCAAGACGCGTACATGGCTGCAGGAGGATCTACACCATTTCC
TGCTCCGTCACACTGTCGACCAATTCATCGGTCAGACCCAAAAACCAAGC
GAGTCTTGGAAACGTACTACTCAATGTCTGAAGTGCAAAAGAAGCGCAAG
GTGGGGAAAAGTTCATTGCAAAATGCTATCAACGGTGAGTACACCCTGCA
GGGCTACCTCTGGGCATATGCCACCTGA

protein sequence of jgi.p|Trimin1|163480

>Trimin1|163480|e_gw1.26.202.1 ID=Trimin1|163480|e_gw1.26.202.1|Name=jgi.p|Trimin1|163480|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=526bp
MDIIKTFVSDNTSYALSIYYKNNVPLFRASDIGDILGLSQVRSSIRDFDE
TEKVAHVVPTAGGDQQVLCLTEAGVYLLLMSSKKPIARPFRKWLCQVLKS
IQAGGSYELEQQFKEQMEKEEKNMEKAIYVKVNEDLEKQKHNDILEVYDK
KPLVYIARFGSINDLKIIKVGSTTDIKQRVSVHWRDFSDCTLLRVFHCSE
RRGFESFLHKHHDIRKYKYEEPINGKKSDEAFLLSDDKLKQLINIAVRKV
SKYQVTSSAMQSLQQDVSHMKQMLEKLQSVDIAESEPQSRRGVCTVNGDK
VQRYSEDGTTLIDTYFQMITVERDEHVQMLAMRFGMRLNRNSIVNTITKQ
HTYLGFRWAMLNRALPDHTVQDIGTTTPPPTLRSGPVVELSDDKATIVRV
FENSEAARISVNERLQDLKQSIKTISRLCKAIKSGDMYKGRYYTSWAECS
WAMQDAYMAAGGSTPFPAPSHCRPIHRSDPKTKRVLETYYSMSEVQKKRK
VGKSSLQNAINGEYTLQGYLWAYAT*

mRNA from alignment at Contig_26:473239..475002+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1907 ID=mRNA_1907|Name=jgi.p|Trimin1|163480|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1764bp|location=Sequence derived from alignment at Contig_26:473239..475002+ (Tribonema minus UTEX_B_3156 )
ATGGACATAATCAAGACATTTGTGAGCGACAACACCAGCTACGCCCTAAG
CATATACTACAAGAACAATGTTCCCCTCTTCAGGGCCTCAGATATCGGAG
ACATCCTGGGCCTGAGTCAGGTGAGGTCGAGCATTCGAGACTTTGATGAG
ACTGAAAAGGTTGCACATGTAGTGCCAACTGCCGGCGGGGATCAACAAGT
TCTGTGCCTGACAGAAGCTGGTGTGTACTTGCTGTTGATGAGCTCAAAGA
AGCCTATAGCACGACCGTTTCGGAAGTGGTTGTGTCAAGTACTAAAGTCA
ATACAGGCTGGCGGCAGTTATGAGCTGGAACAGCAATTCAAAGAGCAGAT
GGAGAAAGAAGAGAAAAACATGGAAAAGGCAATATATGTCAAGGTGAATG
AGGATCTTGAGAAGCAGAAGCACAATGACATCCTTGAGGTGTATGACAAA
AAGCCCCTTGTCTACATTGCCAGGTTTGGGTCAATCAATGACCTTAAGAT
CATCAAAGTCGGCTCGACAACGGACATCAAGCAGAGGGTGAGCGTCCACT
GGAGAGACTTCTCGGACTGCACTCTATTGAGGGTTTTCCATTGTTCTGAA
CGCAGAGGTTTTGAAAGCTTCCTTCATAAGCATCATGACATCCGCAAGTA
CAAGTATGAAGAGCCGATCAACGGGAAGAAGTCGGACGAGGCTTTCCTTC
TCAGTGATGACAAACTCAAGCAGCTGATAAACATAGCAGTTCGGAAAGTA
TCCAAGTATCAGGTGACATCATCAGCCATGCAAAGCCTGCAGCAAGACGT
CTCACACATGAAGCAGATGCTGGAGAAGCTCCAGAGTGTTGTACAGGATA
GGGGCGCCAGTACAAATGCTGAGAGGCCCTTGGCTGACGACATCCCTTCA
CCTAGCTCATGTCAACAAGACGCCGCCGCTGAGAGTGCCTCTGATGCTGA
CCTGGCACAAAGTAACTTGTCTGATGACCGTGATGTTGCTGGCGGCAATG
GCGATGACAGTGGTAGCGACTCTGAGGATATTGCAGAAAGTGAGCCTCAG
AGCCGGCGCGGCGTATGCACAGTGAACGGAGATAAGGTCCAGCGTTACTC
AGAAGATGGCACAACACTGATCGACACATACTTTCAGATGATCACTGTGG
AGAGGGATGAGCATGTGCAAATGTTGGCAATGAGGTTTGGCATGCGCCTG
AATCGGAACAGCATTGTCAATACCATCACGAAACAACACACGTACTTGGG
GTTTCGTTGGGCGATGCTGAACCGTGCGCTGCCCGATCATACAGTGCAGG
ACATTGGTACCACTACTCCACCCCCAACACTTCGAAGCGGTCCAGTCGTA
GAACTCAGTGACGATAAAGCCACCATTGTGCGTGTCTTTGAGAACAGCGA
AGCTGCCCGCATATCAGTCAATGAACGCCTACAGGACCTCAAGCAGTCAA
TCAAGACCATTTCCAGACTTTGCAAGGCCATCAAGAGTGGTGACATGTAC
AAGGGGCGTTACTATACCTCATGGGCTGAATGCTCCTGGGCTATGCAAGA
CGCGTACATGGCTGCAGGAGGATCTACACCATTTCCTGCTCCGTCACACT
GTCGACCAATTCATCGGTCAGACCCAAAAACCAAGCGAGTCTTGGAAACG
TACTACTCAATGTCTGAAGTGCAAAAGAAGCGCAAGGTGGGGAAAAGTTC
ATTGCAAAATGCTATCAACGGTGAGTACACCCTGCAGGGCTACCTCTGGG
CATATGCCACCTGA

Coding sequence (CDS) from alignment at Contig_26:473239..475002+

>mRNA_1907 ID=mRNA_1907|Name=jgi.p|Trimin1|163480|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1578bp|location=Sequence derived from alignment at Contig_26:473239..475002+ (Tribonema minus UTEX_B_3156 )
ATGGACATAATCAAGACATTTGTGAGCGACAACACCAGCTACGCCCTAAG
CATATACTACAAGAACAATGTTCCCCTCTTCAGGGCCTCAGATATCGGAG
ACATCCTGGGCCTGAGTCAGGTGAGGTCGAGCATTCGAGACTTTGATGAG
ACTGAAAAGGTTGCACATGTAGTGCCAACTGCCGGCGGGGATCAACAAGT
TCTGTGCCTGACAGAAGCTGGTGTGTACTTGCTGTTGATGAGCTCAAAGA
AGCCTATAGCACGACCGTTTCGGAAGTGGTTGTGTCAAGTACTAAAGTCA
ATACAGGCTGGCGGCAGTTATGAGCTGGAACAGCAATTCAAAGAGCAGAT
GGAGAAAGAAGAGAAAAACATGGAAAAGGCAATATATGTCAAGGTGAATG
AGGATCTTGAGAAGCAGAAGCACAATGACATCCTTGAGGTGTATGACAAA
AAGCCCCTTGTCTACATTGCCAGGTTTGGGTCAATCAATGACCTTAAGAT
CATCAAAGTCGGCTCGACAACGGACATCAAGCAGAGGGTGAGCGTCCACT
GGAGAGACTTCTCGGACTGCACTCTATTGAGGGTTTTCCATTGTTCTGAA
CGCAGAGGTTTTGAAAGCTTCCTTCATAAGCATCATGACATCCGCAAGTA
CAAGTATGAAGAGCCGATCAACGGGAAGAAGTCGGACGAGGCTTTCCTTC
TCAGTGATGACAAACTCAAGCAGCTGATAAACATAGCAGTTCGGAAAGTA
TCCAAGTATCAGGTGACATCATCAGCCATGCAAAGCCTGCAGCAAGACGT
CTCACACATGAAGCAGATGCTGGAGAAGCTCCAGAGTGTTGATATTGCAG
AAAGTGAGCCTCAGAGCCGGCGCGGCGTATGCACAGTGAACGGAGATAAG
GTCCAGCGTTACTCAGAAGATGGCACAACACTGATCGACACATACTTTCA
GATGATCACTGTGGAGAGGGATGAGCATGTGCAAATGTTGGCAATGAGGT
TTGGCATGCGCCTGAATCGGAACAGCATTGTCAATACCATCACGAAACAA
CACACGTACTTGGGGTTTCGTTGGGCGATGCTGAACCGTGCGCTGCCCGA
TCATACAGTGCAGGACATTGGTACCACTACTCCACCCCCAACACTTCGAA
GCGGTCCAGTCGTAGAACTCAGTGACGATAAAGCCACCATTGTGCGTGTC
TTTGAGAACAGCGAAGCTGCCCGCATATCAGTCAATGAACGCCTACAGGA
CCTCAAGCAGTCAATCAAGACCATTTCCAGACTTTGCAAGGCCATCAAGA
GTGGTGACATGTACAAGGGGCGTTACTATACCTCATGGGCTGAATGCTCC
TGGGCTATGCAAGACGCGTACATGGCTGCAGGAGGATCTACACCATTTCC
TGCTCCGTCACACTGTCGACCAATTCATCGGTCAGACCCAAAAACCAAGC
GAGTCTTGGAAACGTACTACTCAATGTCTGAAGTGCAAAAGAAGCGCAAG
GTGGGGAAAAGTTCATTGCAAAATGCTATCAACGGTGAGTACACCCTGCA
GGGCTACCTCTGGGCATATGCCACCTGA