mRNA_18894 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|354734
Unique Name	mRNA_18894
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A835YUQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUQ9_9STRA)

HSP 1 Score: 191 bits (486), Expect = 3.670e-61
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query:   16 MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSRQLERRPVAPHKHIPSQLWCTHAEEDDPSLAKGWGSR 273
            MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSRQLERRPVAPHKHIPSQLWCTHAEEDDPSLAKGWGSR
Sbjct:    1 MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSRQLERRPVAPHKHIPSQLWCTHAEEDDPSLAKGWGSR 86

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: D7G068_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G068_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 4.300e-31
Identity = 50/79 (63.29%), Postives = 58/79 (73.42%), Query Frame = 1

Query:   16 MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSRQLERRPVAPHKHIPSQLWCTHAEEDDPSL 252
            MGGGR FH+PK+VWSPAGGWW  P  W+RNT  AF  I L  +A+  +S   ERRP+AP  HIPSQ WC HA+EDDPSL
Sbjct:    1 MGGGRHFHFPKHVWSPAGGWWVNPPHWKRNTGFAFVGIGLAFIAIARISSDRERRPIAPAFHIPSQRWCKHAKEDDPSL 79

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: UPI001CF0F221 (uncharacterized protein LOC114956067 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF0F221)

HSP 1 Score: 112 bits (279), Expect = 1.330e-29
Identity = 50/79 (63.29%), Postives = 60/79 (75.95%), Query Frame = 1

Query:   16 MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSRQLERRPVAPHKHIPSQLWCTHAEEDDPSL 252
            MGG +KF YPKYVWSPAGGWW  P  W+RNTA+AFG I  + + V  +S  LERR V P++HIPSQ +C HA+EDDPSL
Sbjct:    1 MGGVKKFDYPKYVWSPAGGWWCNPRNWKRNTAIAFGVIFAMCIPVHYISWSLERRYVPPYRHIPSQRFCKHAKEDDPSL 79

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A6S7H709_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H709_PARCT)

HSP 1 Score: 110 bits (274), Expect = 5.750e-29
Identity = 49/80 (61.25%), Postives = 61/80 (76.25%), Query Frame = 1

Query:   16 MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSRQLERRPVAPHKHIPSQLWCTHAEEDDPSLA 255
            MGGG++F YPKYVWSP+GGWW +P  W+RNTA+ FG I    + +  LS QLERRPVAP++HI SQ +  HA+EDDPSL 
Sbjct:    1 MGGGKRFDYPKYVWSPSGGWWCEPRNWRRNTAIGFGMIFAACVPICWLSWQLERRPVAPYRHIFSQRFAKHAKEDDPSLT 80

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A196SL48_BLAHN (Uncharacterized protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SL48_BLAHN)

HSP 1 Score: 108 bits (270), Expect = 2.330e-28
Identity = 46/79 (58.23%), Postives = 55/79 (69.62%), Query Frame = 1

Query:   16 MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSRQLERRPVAPHKHIPSQLWCTHAEEDDPSL 252
            M GG  F YPKYVWSPAGGWW Q   W+RNT +A   +  L++ VF  S  +ERRP+ P +HIPSQ WC HA+EDDP L
Sbjct:    1 MSGGTPFRYPKYVWSPAGGWWGQNANWRRNTRIAAVVMVALSIPVFIASANMERRPIPPVRHIPSQYWCKHAKEDDPRL 79

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A1X7UGN9_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UGN9_AMPQE)

HSP 1 Score: 106 bits (265), Expect = 1.410e-27
Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 1

Query:   19 GGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSRQLERRPVAPHKHIPSQLWCTHAEEDDPSLAK 258
            GG ++F YPKYVWSP+GGWW  P  W+RNT +    + L  + V  +S +LERRPVAP++HIPSQ WC +AE DDPSL K
Sbjct:    1 GGTKEFPYPKYVWSPSGGWWCNPRHWRRNTNIGLLIVVLSCIPVAYISAKLERRPVAPYRHIPSQRWCKYAETDDPSLQK 80

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: UPI0013901F45 (uncharacterized protein LOC116613693 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013901F45)

HSP 1 Score: 106 bits (264), Expect = 5.160e-27
Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 1

Query:   16 MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSRQLERRPVAPHKHIPSQLWCTHAEEDDPSLAKGW 264
            MGGG+KF YPK+VWSP+GGWW  P  W+RNT +AFG  A + + V  ++ QLERRPV P++HIPSQ    +A+ DDPSL   +
Sbjct:   26 MGGGKKFAYPKFVWSPSGGWWCNPKNWRRNTLIAFGVYAAICIPVAYIALQLERRPVPPYRHIPSQRLAKYAKVDDPSLPDNY 108

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A1Z5JPC4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPC4_FISSO)

HSP 1 Score: 105 bits (261), Expect = 5.410e-27
Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 1

Query:   16 MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSRQLERRPVAPHKHIPSQLWCTHAEEDDPSLAK 258
            MGGG  ++ PK VWSPAGGWWN P  W+RNT +A   + +L + +F +S   ERRP+ P  HIPSQ WC HA EDDP LAK
Sbjct:    1 MGGGGWYYVPK-VWSPAGGWWNNPANWKRNTGIAGAVVGILAVGLFQVSSSRERRPIPPPWHIPSQYWCKHAVEDDPRLAK 80

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A4D9DFY8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFY8_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.480e-25
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 1

Query:   16 MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSRQLERRPVAPHKHIPSQLWCTHAEEDDPSL 252
            MGGGR F++P ++W+P+GGW+  P  W+ NT +  G I +   + F+LS  LERRP+AP  HIPSQ WC HA EDD SL
Sbjct:    1 MGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSWCKHAAEDDKSL 79

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A2B4SQG4_STYPI (Uncharacterized protein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SQG4_STYPI)

HSP 1 Score: 99.8 bits (247), Expect = 9.510e-25
Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 1

Query:   16 MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSRQLERRPVAPHKHIPSQLWCTHAEEDDPSLAKGW 264
            MGG +KF YPKYVWSP GGWW  P  W+RNTA+ F  +  L + V  LS   ERR V P++HIPSQ +  +A+EDDPSL   +
Sbjct:    1 MGGVKKFDYPKYVWSPTGGWWCNPRNWKRNTAICFAVVLGLQIPVALLSWSRERRYVPPYRHIPSQRFARYAKEDDPSLPDNY 83

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A835Z007_9STRA (Rho-GAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z007_9STRA)

HSP 1 Score: 1768 bits (4579), Expect = 0.000e+0
Identity = 1275/1275 (100.00%), Postives = 1275/1275 (100.00%), Query Frame = 1

Query:    1 MSQHHAAHMSWFDASPGEEASQEQNYLMDALFETAFVDATVASANSTSSFIRPARSSVSSSSRRDSNPPANTNGSSLPRSLQQRSSSSRSRDGSSLSLPPHPLSCHSPDSAAAASETNSVPLMSPLTSNSYSNSNNRPVSRTPSVHDVTSAAARAAKAAAVAQSNAELAAAVAAADTLWAGGHHLTKSTSEPADLGAGPALSQEHGQDEGAGTGRGQDSADYRLLLEEARRLDLRDIADSGALQIAGRDLEGRVVILCTPAECVPQGASSQERSXXXXXXXXXXXXXXXAAAHRFSMAFKQGGFPAMQEQMGGAAIGIGGQGGGSVLSELATNLGESTELARLLLYFVALLDGVVGGRYVLVFCNTGFDWLSWSRYSFLGQLHGALPRRYRKNLQRLIIVHPSQVLKMFFMFGRLFLSPKVYNKVHFCEHVADLLELLPREAVALLPETVFLHDTPGLTRLSSLHPSSSGAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARKDACLSGKTYAYIAHSSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWTEGVGMSSHXXXXXXXXXXXXXXXXRQSFGDRPRDLANAHASIWGDGXXXXXXXXXTTDVSALLQLPPRCSSVKRSSTGGASSRVTFSDAQSTLPEGRAAGGRRSMEGRGVLEAAMSAEERMARTERARTSFGGXXXXXXXXXGAPERPQGRRSVEGRXXXXXXXXXXXXXTAEDGPSKTEHARVTFSDFAXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSWPDQPPPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPSAQHHRMGASVPRNISARIGVRAMESIRLAQAQALLQXXXXXXXXXXXXXXXXXXRSTMLRQQVSAAEMTAALRAHRRSLGVDARSSDARPKTAKSSASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRHSRYSVLSPGARARMSTRAFAKGFGLHRKSHAGSTAAAAAAKAAVLRRGPPDPRGPVMGVDIMAAVGQGEVPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPTVKWVTAMKTILWKVPSAVYATLRGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFVTLRDLQFGTDTTAWLIERVNDVFTDDDM 3825
            MSQHHAAHMSWFDASPGEEASQEQNYLMDALFETAFVDATVASANSTSSFIRPARSSVSSSSRRDSNPPANTNGSSLPRSLQQRSSSSRSRDGSSLSLPPHPLSCHSPDSAAAASETNSVPLMSPLTSNSYSNSNNRPVSRTPSVHDVTSAAARAAKAAAVAQSNAELAAAVAAADTLWAGGHHLTKSTSEPADLGAGPALSQEHGQDEGAGTGRGQDSADYRLLLEEARRLDLRDIADSGALQIAGRDLEGRVVILCTPAECVPQGASSQERSXXXXXXXXXXXXXXXAAAHRFSMAFKQGGFPAMQEQMGGAAIGIGGQGGGSVLSELATNLGESTELARLLLYFVALLDGVVGGRYVLVFCNTGFDWLSWSRYSFLGQLHGALPRRYRKNLQRLIIVHPSQVLKMFFMFGRLFLSPKVYNKVHFCEHVADLLELLPREAVALLPETVFLHDTPGLTRLSSLHPSSSGAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARKDACLSGKTYAYIAHSSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWTEGVGMSSHXXXXXXXXXXXXXXXXRQSFGDRPRDLANAHASIWGDGXXXXXXXXXTTDVSALLQLPPRCSSVKRSSTGGASSRVTFSDAQSTLPEGRAAGGRRSMEGRGVLEAAMSAEERMARTERARTSFGGXXXXXXXXXGAPERPQGRRSVEGRXXXXXXXXXXXXXTAEDGPSKTEHARVTFSDFAXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSWPDQPPPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPSAQHHRMGASVPRNISARIGVRAMESIRLAQAQALLQXXXXXXXXXXXXXXXXXXRSTMLRQQVSAAEMTAALRAHRRSLGVDARSSDARPKTAKSSASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRHSRYSVLSPGARARMSTRAFAKGFGLHRKSHAGSTAAAAAAKAAVLRRGPPDPRGPVMGVDIMAAVGQGEVPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPTVKWVTAMKTILWKVPSAVYATLRGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFVTLRDLQFGTDTTAWLIERVNDVFTDDDM
Sbjct:    1 MSQHHAAHMSWFDASPGEEASQEQNYLMDALFETAFVDATVASANSTSSFIRPARSSVSSSSRRDSNPPANTNGSSLPRSLQQRSSSSRSRDGSSLSLPPHPLSCHSPDSAAAASETNSVPLMSPLTSNSYSNSNNRPVSRTPSVHDVTSAAARAAKAAAVAQSNAELAAAVAAADTLWAGGHHLTKSTSEPADLGAGPALSQEHGQDEGAGTGRGQDSADYRLLLEEARRLDLRDIADSGALQIAGRDLEGRVVILCTPAECVPQGASSQERSXXXXXXXXXXXXXXXAAAHRFSMAFKQGGFPAMQEQMGGAAIGIGGQGGGSVLSELATNLGESTELARLLLYFVALLDGVVGGRYVLVFCNTGFDWLSWSRYSFLGQLHGALPRRYRKNLQRLIIVHPSQVLKMFFMFGRLFLSPKVYNKVHFCEHVADLLELLPREAVALLPETVFLHDTPGLTRLSSLHPSSSGAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARKDACLSGKTYAYIAHSSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWTEGVGMSSHXXXXXXXXXXXXXXXXRQSFGDRPRDLANAHASIWGDGXXXXXXXXXTTDVSALLQLPPRCSSVKRSSTGGASSRVTFSDAQSTLPEGRAAGGRRSMEGRGVLEAAMSAEERMARTERARTSFGGXXXXXXXXXGAPERPQGRRSVEGRXXXXXXXXXXXXXTAEDGPSKTEHARVTFSDFAXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSWPDQPPPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPSAQHHRMGASVPRNISARIGVRAMESIRLAQAQALLQXXXXXXXXXXXXXXXXXXRSTMLRQQVSAAEMTAALRAHRRSLGVDARSSDARPKTAKSSASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRHSRYSVLSPGARARMSTRAFAKGFGLHRKSHAGSTAAAAAAKAAVLRRGPPDPRGPVMGVDIMAAVGQGEVPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPTVKWVTAMKTILWKVPSAVYATLRGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFVTLRDLQFGTDTTAWLIERVNDVFTDDDM 1275

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: D7FL35_ECTSI (Similar to Rho GTPase activating protein 24 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL35_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 1.770e-49
Identity = 110/216 (50.93%), Postives = 146/216 (67.59%), Query Frame = 1

Query: 3190 VMGVDIMAAVGQGE-VPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEP------PAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPTVKWVTAMKTILWKVPSAVYATLRGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFVTLRDLQFGTDTTAWLIERVNDVFTD 3816
            V GV ++  + QGE VPWVV R + FL   G L++VGLFR+AGDG++   LR+A++  +QV WDP +P        G    A   L D  +VAQLLKA+FRELPEP++P++ Y +VIAIA+AAG    +WV AMK+ILW +P A Y  LR LF FLR VA  S+ N MT+ NLAIVWAPNL+RP D +PF  LRDL+F  +T  W+++  + +F D
Sbjct: 1108 VFGVPLIGLMQQGEQVPWVVKRFVDFLSKFG-LESVGLFRLAGDGMDCADLRDALDNGKQVCWDPIDPIDEAEGSTGATDCASSSLMDVNMVAQLLKAFFRELPEPLVPFSAYSKVIAIAKAAGVADARWVQAMKSILWGIPIANYNCLRFLFEFLREVAMHSSTNRMTSENLAIVWAPNLLRPQDDDPFAVLRDLRFQIETVRWMVDCCDQLFDD 1322

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A6H5JEV0_9PHAE (Rho-GAP domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV0_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 1.580e-46
Identity = 107/214 (50.00%), Postives = 145/214 (67.76%), Query Frame = 1

Query: 3190 VMGVDIMAAVGQGE-VPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDD------ISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPTVKWVTAMKTILWKVPSAVYATLRGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFVTLRDLQFGTDTTAWLIERVNDVF 3810
            V GV ++  + QGE VPWVV R + FL   G L++VGLFR+AGDG++   LR+A++  +QV WDP +P    +      + A   L D  +VAQLLKA+FRELPEP++P++   +VIAIA+AAG    +WV AMK+ILW +P A Y  LR LF FLR VA  S+ N MT+ NLAIVWAPNL+RP D +PF  LRDL+F  +T  W+++  + +F
Sbjct: 1057 VFGVPLIGLMQQGEQVPWVVKRFVDFLSKFG-LESVGLFRLAGDGMDCADLRDALDNGKQVCWDPMDPIDETEESTKATVCASSSLMDVNMVAQLLKAFFRELPEPLVPFS---KVIAIAKAAGVADARWVQAMKSILWGIPIANYNCLRFLFEFLRKVAMHSSTNRMTSENLAIVWAPNLLRPQDDHPFAVLRDLRFQIETVRWMVDCCDQLF 1266

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A7R9UHX6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UHX6_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.160e-19
Identity = 69/184 (37.50%), Postives = 97/184 (52.72%), Query Frame = 1

Query: 3274 RGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPTV---KWVTAMKTILWKVPSAVYATLRGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFVTLRDLQFGTDTTAWLIERVNDVFTD 3816
            R R D VGL  + G  V + +     +         D P         L L D   VA+LLKA+ RELPEP+IP+  Y  +++  R  G       +WV  ++TI++ + S  Y  LR LF+FL   A + A NLMTA NLAIV+APN++R  D + +  LRD+  G  T   +IE  ++VF D
Sbjct:   98 RRRSDEVGLSSMRGTMVSISSGEFRPSDMAPAPGSSDVPDEIRKADRFL-LTDVYCVARLLKAFLRELPEPLIPFNKYVPLLSATRKYGRDDEGLPQWVHVVRTIVYTMNSTHYEVLRYLFMFLVRAAKEEA-NLMTAENLAIVFAPNILRSRDDSLYAELRDMGLGLTTVLLMIENASEVFKD 279

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: UPI000644F09A (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644F09A)

HSP 1 Score: 95.5 bits (236), Expect = 1.180e-16
Identity = 64/212 (30.19%), Postives = 110/212 (51.89%), Query Frame = 1

Query: 3187 PVMGVDIMAAVGQ----GEVPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPTVKWVTAMKTILWKVPSAVYATLRGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFVTLRDLQFGTDTTAWLIERVNDVF 3810
            P+ GV +   V +     ++P +  +   +L  R  L   G+FR++G   ++++++   +             +G+DI+ +    D   VA LLK Y RELPEP+ P+  YP  I IA++   P  + + ++K ++  +P A  A  R LF FL  V   + +N MTA NL+IV+APNL++  DTN    + D Q       +L+E ++ ++
Sbjct:  259 PIFGVPLEQVVNRPDNNSDIPVLFVKGFEYLETRA-LHVEGIFRLSGANSQIKSMKQCFD-------------SGEDIN-LNDCEDVHTVAGLLKLYLRELPEPLFPFDTYPSFIEIAKS-DMPREEKIESLKLLISLLPPANRALTRQLFHFLDKVLQNAHINKMTAVNLSIVFAPNLLKTQDTNVMAVVADAQHVILVVQYLLENISTIW 454

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A1X2H322_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H322_SYNRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.680e-16
Identity = 69/209 (33.01%), Postives = 114/209 (54.55%), Query Frame = 1

Query: 3190 VMGVDIM--AAVGQGEVPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPTVKWVTAMKTILWKVPSAVYATLRGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFVTLRDLQFGTDTTAWLIERVNDVF 3810
            + G D+   AA+    VP +V +C+A + ARG +D  G++R +G   ++ A++ +     Q   D      GDDI+      D   +  +LK YFR+LP+P++ +ALY   + +AR   G +   + A   +L ++PSA Y TLR L   L  +  +S+ NLMT  NLA+V+AP L+R  DT+    L D+ +      ++I +V+ +F
Sbjct:  700 LFGTDLTERAAIENRSVPLIVQQCIAAVEARG-MDLEGIYRKSGGAAQMRAIQRSYE--TQAPLDL----LGDDIN------DICAITSVLKHYFRQLPDPLLTFALYDTFLDVARLEPGQSK--IQAFTHVLSQLPSANYDTLRLLLQHLNRIRLQSSENLMTTKNLAMVFAPTLMRDRDTSR--ELVDMSYKNAVLEFMINQVDALF 891

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: UPI001F5E8EB2 (rho GTPase-activating protein 45-like n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F5E8EB2)

HSP 1 Score: 95.9 bits (237), Expect = 3.840e-16
Identity = 63/226 (27.88%), Postives = 121/226 (53.54%), Query Frame = 1

Query: 3187 PVMGVDIMAAVGQGE--VPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPT----VKWVTAMKTILWKVPSAVYATLRGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFV-TLRDLQFGTDTTAWLIERVNDVFTDDDM*QSSRR 3843
            PV G D+   + +    +P+++ +C+  + ARGR  + G++RV+G   +L+ L NA                G D+  +  +  P V+A +LK Y R+LPEP++ + LYP  + +A+           + V + + ++ ++P + Y TL  L L L+ VAD++ VN M A NL IV+ P L+RP ++ P + +L D    +     +I   +++F+ +++ ++ ++
Sbjct:  619 PVFGTDLNNYLSETAHLIPFIICKCIDEIDARGR-QSKGIYRVSGVKTKLDKLCNAFE-------------IGGDLVDLSDIH-PNVIADVLKIYLRQLPEPLLSFKLYPDFVRLAKEFASDEDLDRARCVQSFRELVARLPKSHYLTLAALMLHLKRVADEADVNNMPASNLGIVFGPTLLRPDESMPSMNSLVDTAQNSRAVELMIRLSDELFSSEEVWEARQK 829

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A7R9AET3_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9AET3_9CRUS)

HSP 1 Score: 94.7 bits (234), Expect = 8.590e-16
Identity = 72/216 (33.33%), Postives = 111/216 (51.39%), Query Frame = 1

Query: 3178 PRGPVMGV--DIMAAVGQGE-VPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPTVKWVTAMKTILWKVPSAVYATLRGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFVTLRDLQFGTDTTAWLIERVNDVFTD 3816
            P G  +GV  ++ +   + E VP VV  C + +  +G  + VGL+RV G+   + +L  AVN   + L D  + P   D++         V++ LLK++FR LPEP++   LYP  IA  +       +++T +K +L ++P   Y TLR L L L+ V+   A N M   NLAIV+ PNLIRPM+ +    + D+         L+   N  F D
Sbjct:  304 PEGATIGVPLELCSMSPRNECVPAVVEFCTSIVELKGG-NAVGLYRVPGNSAAVASLTEAVNRGFENL-DIQQDPRWTDVN---------VISSLLKSFFRRLPEPVVTAELYPSFIAACKLEDIRE-RYIT-IKKLLRELPEVNYETLRHLSLHLQRVSGNQATNKMDPRNLAIVFGPNLIRPMEEDMVTMVNDMSQQCKIVETLVLHANWFFDD 506

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: UPI00138FCBC8 (rho GTPase-activating protein 32 isoform X1 n=2 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FCBC8)

HSP 1 Score: 92.8 bits (229), Expect = 3.370e-15
Identity = 66/203 (32.51%), Postives = 102/203 (50.25%), Query Frame = 1

Query: 3214 AVGQGEVPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPTVKWVTAMKTILWKVPSAVYATLRGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFVT-LRDLQFGTDTTAWLIERVNDVFTDD 3819
            AV   ++P V+ +C A +   G +D  G++R++G    ++ LR         L+D DEPP  DD     +LRD   ++ LLK YFRELP P++ Y+LY + ++  +       K   A+  ++ ++P   Y TL  L   L  VA  +    M A NLAIVWAPNL++P       T L ++        +LI    ++F  D
Sbjct:  374 AVTCRQIPLVLEKCAAVIEEHGIVD--GIYRLSGSSSIIQKLR--------FLFDGDEPPELDD---EYYLRDVHCISSLLKMYFRELPNPLLTYSLYDKFVSAIQITDEKERK--VAIHHVVQQLPPPHYRTLEYLLQHLAEVASHAGQTAMHAKNLAIVWAPNLLKPRSQEYGSTALLEINVQAIIVEYLIRNAAELFDRD 561

[Close]

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Match: A0A194PS90_PAPXU (GTPase-activating protein CdGAPr n=13 Tax=Papilio TaxID=7145 RepID=A0A194PS90_PAPXU)

HSP 1 Score: 92.8 bits (229), Expect = 4.280e-15
Identity = 71/197 (36.04%), Postives = 99/197 (50.25%), Query Frame = 1

Query: 3229 EVPWVVARCMAFLCARGRLDTVGLFRVAGDGVELEALRNAVNGAQQVLWDPDEPPAGDDISAMLHLRDPLVVAQLLKAYFRELPEPIIPYALYPQVIAIARAAGGPTVKWVTAMKTILWKVPSAVYATLRGLFLFLRSVADKSAVNLMTAGNLAIVWAPNLIRPMDTNPFVTLRDLQFGTDTTAWLIERVNDVFTDD 3819
            +VP V+A C   +  RG +D  G++R++G     + LR A + A       D PP   D++  L  RDP  +A LLK YFRELP P+  Y LY   ++  +         + AM+  + K+P   Y TL  L   LR V+  SA   MTA N+AIVWAPNL+R     P   L+ +      T +LI    D+F  D
Sbjct:  447 DVPQVLAECARAIERRGAVD--GIYRLSGGAALTQRLRAAFDAAG------DTPP---DLAPPLQ-RDPHALASLLKMYFRELPNPLCTYQLYESFVSAVQQPD--EAARLRAMRDTVVKLPPPHYRTLSYLMRHLRRVSLLSAATGMTARNMAIVWAPNLLR--SPAPQHALQGVAVQAVVTEFLICYAEDLFAQD 627

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354734 vs. uniprot
BLAST of jgi.p|Trimin1|354734 vs. uniprot

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YUQ9_9STRA	3.670e-61	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7G068_ECTSI	4.300e-31	63.29	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
UPI001CF0F221	1.330e-29	63.29	uncharacterized protein LOC114956067 n=1 Tax=Acrop...	[more]
A0A6S7H709_PARCT	5.750e-29	61.25	Uncharacterized protein n=2 Tax=Paramuricea clavat...	[more]
A0A196SL48_BLAHN	2.330e-28	58.23	Uncharacterized protein n=1 Tax=Blastocystis sp. s...	[more]
A0A1X7UGN9_AMPQE	1.410e-27	57.50	Uncharacterized protein n=1 Tax=Amphimedon queensl...	[more]
UPI0013901F45	5.160e-27	55.42	uncharacterized protein LOC116613693 n=1 Tax=Nemat...	[more]
A0A1Z5JPC4_FISSO	5.410e-27	56.79	Uncharacterized protein n=1 Tax=Fistulifera solari...	[more]
A0A4D9DFY8_9STRA	3.480e-25	53.16	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A2B4SQG4_STYPI	9.510e-25	54.22	Uncharacterized protein n=1 Tax=Stylophora pistill...	[more]

Pages

BLAST of jgi.p|Trimin1|354734 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z007_9STRA	0.000e+0	100.00	Rho-GAP domain-containing protein n=1 Tax=Tribonem...	[more]
D7FL35_ECTSI	1.770e-49	50.93	Similar to Rho GTPase activating protein 24 n=1 Ta...	[more]
A0A6H5JEV0_9PHAE	1.580e-46	50.00	Rho-GAP domain-containing protein n=2 Tax=Ectocarp...	[more]
A0A7R9UHX6_9STRA	1.160e-19	37.50	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
UPI000644F09A	1.180e-16	30.19	hypothetical protein n=1 Tax=Acytostelium subglobo...	[more]
A0A1X2H322_SYNRA	2.680e-16	33.01	Uncharacterized protein n=1 Tax=Syncephalastrum ra...	[more]
UPI001F5E8EB2	3.840e-16	27.88	rho GTPase-activating protein 45-like n=2 Tax=Schi...	[more]
A0A7R9AET3_9CRUS	8.590e-16	33.33	Hypothetical protein n=1 Tax=Darwinula stevensoni ...	[more]
UPI00138FCBC8	3.370e-15	32.51	rho GTPase-activating protein 32 isoform X1 n=2 Ta...	[more]
A0A194PS90_PAPXU	4.280e-15	36.04	GTPase-activating protein CdGAPr n=13 Tax=Papilio ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_517	contig	Contig_517:3398..4800 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|354734\|estExt_Genemark1.C_Ctg_5170002
Max annot lvl	33208\|Metazoa
EggNOG OGs	2CGJ1@1\|root,2S6YK@2759\|Eukaryota,3A92W@33154\|Opisthokonta,3C3J4@33208\|Metazoa
Evalue	3.84e-30
Seed ortholog	400682.PAC_15716111
Hectar predicted targeting category	other localisation
TranscriptId	355056
Track	FilteredModels1
ProteinId	354734

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354734	gene_18894	Tribonema minus UTEX_B_3156	gene	Contig_517 3398..4800 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354734	Trimin1\|354734\|estExt_Genemark1.C_Ctg_5170002	Tribonema minus UTEX_B_3156	polypeptide	Contig_517 3546..4785 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_18894_3	exon_18894_3	Tribonema minus UTEX_B_3156	exon	Contig_517 3398..3647 -
exon_18894_2	exon_18894_2	Tribonema minus UTEX_B_3156	exon	Contig_517 4454..4537 -
exon_18894_1	exon_18894_1	Tribonema minus UTEX_B_3156	exon	Contig_517 4711..4800 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_18894	UTR3_18894	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_517 3398..3545 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_18894	CDS_18894	Tribonema minus UTEX_B_3156	CDS	Contig_517 4711..4785 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_18894	UTR5_18894	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_517 4786..4800 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_517:3398..4800-
coding sequence from alignment at Contig_517:3398..4800-

spliced messenger RNA

>mRNA_18894 ID=mRNA_18894|Name=jgi.p|Trimin1|354734|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=424bp|location=Sequence derived from alignment at Contig_517:3398..4800- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GAGAAAACAAACACCATGGGTGGCGGCAGGAAATTCCACTACCCTAAGTA
TGTCTGGTCCCCGGCGGGCGGCTGGTGGAATCAGCCCACGGCCTGGCAAC
GGAACACGGCGGTGGCGTTTGGGGCTATAGCGTTGCTCAATCTGGCGGTA
TTCAACCTGTCTCGGCAGCTGGAGCGGCGACCGGTTGCTCCCCACAAGCA
CATACCGAGCCAGCTGTGGTGCACGCACGCGGAGGAAGACGACCCGTCGC
TGGCCAAGGGCTGGGGATCACGCTAGAAAATGCTAGAACACGAGCAGCGA
TAGCTGGGGAACGAAAGGAAGCACTCGAGGTAGCAGGTGTAGGGGTCATG
GGCAGGTGTGTATGGTGCTCTGTCGAAAGGACAGGTGCAGGTGCGGAATG
TAAATGGTCACATATTTTACCATG

protein sequence of jgi.p|Trimin1|354734

>Trimin1|354734|estExt_Genemark1.C_Ctg_5170002 ID=Trimin1|354734|estExt_Genemark1.C_Ctg_5170002|Name=jgi.p|Trimin1|354734|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=87bp
MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLSR
QLERRPVAPHKHIPSQLWCTHAEEDDPSLAKGWGSR*

mRNA from alignment at Contig_517:3398..4800-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_18894 ID=mRNA_18894|Name=jgi.p|Trimin1|354734|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1403bp|location=Sequence derived from alignment at Contig_517:3398..4800- (Tribonema minus UTEX_B_3156 )
GAGAAAACAAACACCATGGGTGGCGGCAGGAAATTCCACTACCCTAAGTA
TGTCTGGTCCCCGGCGGGCGGCTGGTGGAATCAGCCCACGGTGAGCCTGC
GATTCCCGAATCAGACCTATCAGTTCAGACGCAAATAGCAAAGCTTGACA
GCTGCTGCATTGATTTGCGCAGCATGTATTGCTCAATTCGACTACTTGCA
GCAGGCAATCGCACTATCATACCCAGATCGCACAGACTCAAGTTCGACTT
CGCGTGCTGGCAGGCCTGGCAACGGAACACGGCGGTGGCGTTTGGGGCTA
TAGCGTTGCTCAATCTGGCGGTATTCAACCTGTCTCGGCAGCTGGAGGTG
AGTTTCAGTGATGCAGATTTCTTGAGGAGCAAGTTGATATCCAATCACGC
AGAGGTGCAGAACCTACACTGCAGCGACTGTTTCTGGATGTGAGCGCCGC
TAGGCTTTCAAGGCAGCTGATAAGCTAGAAGCTCATCACTTCAGCAGCAG
CTCTAAAATTGCTGTGCTGACAGGACCTAGCTTTCCAATATATCCATCTC
TCATCCCGCTACGCCTGAATGGGTTTGCAGCTGGTGATTGGCAGAAGCAT
GAGTTGAATTCCAAGTGCTGTAGCCACTGAATTGCATTCATGCTCAAAGC
TATCGGCCGTGTAGATTCAACGCGCTGACAACGTGCCTTCACATAATGAC
AGTAGCCTGCCTCCATGCAATGCGGTGCCCTCCAACTGCCGATGCTCATG
TCCTCCTCAGCATCGTTGTGGAACCCACAATACGGATGATTTCCACTGAG
CCTTTGCAAGTGGTGCCGCCGTATGCACGGCACGCAGTGTTAACTCAACA
CAGCGCCATGTCAACATGTATGTGGACCTGGCGCTGACACTGACACTCCA
CAACGTCGTGGATGCGTGTACCACACATTGCATACATGCTTCTTGAAGTA
CATGCGTTGGTGTCGTTCGCTTGTCATGCCAGCTGCGTTTGCCATGCCAG
TGCAACAGTGGAACACTGCAATGAAACTTCAGTGCTGCATTTAAAAAGTA
CGACTCTTGCATTGCGCCCCATCATTCATGTGATTATTCATGATTTTGAA
TCATCGTTTTCATGTGATGTCGCGTGTCGCCCCTCGCGCGTTCCGCTCCG
CAGCGGCGACCGGTTGCTCCCCACAAGCACATACCGAGCCAGCTGTGGTG
CACGCACGCGGAGGAAGACGACCCGTCGCTGGCCAAGGGCTGGGGATCAC
GCTAGAAAATGCTAGAACACGAGCAGCGATAGCTGGGGAACGAAAGGAAG
CACTCGAGGTAGCAGGTGTAGGGGTCATGGGCAGGTGTGTATGGTGCTCT
GTCGAAAGGACAGGTGCAGGTGCGGAATGTAAATGGTCACATATTTTACC
ATG

Coding sequence (CDS) from alignment at Contig_517:3398..4800-

>mRNA_18894 ID=mRNA_18894|Name=jgi.p|Trimin1|354734|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=261bp|location=Sequence derived from alignment at Contig_517:3398..4800- (Tribonema minus UTEX_B_3156 )
ATGGGTGGCGGCAGGAAATTCCACTACCCTAAGTATGTCTGGTCCCCGGC
GGGCGGCTGGTGGAATCAGCCCACGGCCTGGCAACGGAACACGGCGGTGG
CGTTTGGGGCTATAGCGTTGCTCAATCTGGCGGTATTCAACCTGTCTCGG
CAGCTGGAGCGGCGACCGGTTGCTCCCCACAAGCACATACCGAGCCAGCT
GTGGTGCACGCACGCGGAGGAAGACGACCCGTCGCTGGCCAAGGGCTGGG
GATCACGCTAG