mRNA_18800 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354608
Unique NamemRNA_18800
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|354608 vs. uniprot
Match: A0A835YXB9_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXB9_9STRA)

HSP 1 Score: 569 bits (1467), Expect = 6.410e-198
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 1 
Query:    1 MAELYAVDPPGKIYWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQIAELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRHSCDALAAIRDISXXXXXXXXXXXXXXXXXXXXXXGTCLDERIIRAELDPGFQDGRQYGRGTSGGQVRDERNKQYGGVDLARQAPPMDSQLGFAGLAPQLSEVATTALTXXXXXXXXXXXXXXATQHTATNTLLPPHTPXXXXXXXXSDAHCPPRDREMDEFGRALPSKRQREPSVETAAAXXXXXXXXXXXXXXXXEXXXXXXXXXPAEPAPMDAGAEEVKELSPPEAAAAEDLSTGAKKRARDDDADADNDEAAQLSKRSKLDENDMLAKETEAAAAD 1137
            MAELYAVDPPGKIYWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQIAELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRHSCDALAAIRDISXXXXXXXXXXXXXXXXXXXXXXGTCLDERIIRAELDPGFQDGRQYGRGTSGGQVRDERNKQYGGVDLARQAPPMDSQLGFAGLAPQLSEVATTALTXXXXXXXXXXXXXXATQHTATNTLLPPHTPXXXXXXXXSDAHCPPRDREMDEFGRALPSKRQREPSVETAAAXXXXXXXXXXXXXXXXEXXXXXXXXXPAEPAPMDAGAEEVKELSPPEAAAAEDLSTGAKKRARDDDADADNDEAAQLSKRSKLDENDMLAKETEAAAAD
Sbjct:    1 MAELYAVDPPGKIYWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQIAELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRHSCDALAAIRDISXXXXXXXXXXXXXXXXXXXXXXGTCLDERIIRAELDPGFQDGRQYGRGTSGGQVRDERNKQYGGVDLARQAPPMDSQLGFAGLAPQLSEVATTALTXXXXXXXXXXXXXXATQHTATNTLLPPHTPXXXXXXXXSDAHCPPRDREMDEFGRALPSKRQREPSVETAAAXXXXXXXXXXXXXXXXEXXXXXXXXXPAEPAPMDAGAEEVKELSPPEAAAAEDLSTGAKKRARDDDADADNDEAAQLSKRSKLDENDMLAKETEAAAAD 379
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BLAST of jgi.p|Trimin1|354608 vs. uniprot
Match: A0A0F7RWA3_9BASI (Nuclear cap-binding protein subunit 2 (Fragment) n=1 Tax=Sporisorium scitamineum TaxID=49012 RepID=A0A0F7RWA3_9BASI)

HSP 1 Score: 135 bits (341), Expect = 1.700e-33
Identity = 79/171 (46.20%), Postives = 105/171 (61.40%), Query Frame = 1 
Query:   10 LYAVDPPGKIYWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQIAELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRHSCDALAAIRDISXXXXXXXXXXXXXXXXXXXXXXGTCLDERIIRAELDPGFQDGRQYGRGTSGGQVRDERNKQY 522
            L  +D P   Y D ++  + EQ + AL+ + TLY+GNLSFYTTE QI E+FS+         +A L S  G + R+IMGLDRN +TPCGFAFVE+    +A+ ++R ++                      GT LDERIIR +LDPG+++GRQYGRG SGGQVRDE  K+Y
Sbjct:    5 LQPLDAPSP-YRDSRSDTTKEQQLQALRKTATLYLGNLSFYTTEEQIYEVFSR---------VASL-SSGGGIKRIIMGLDRNTKTPCGFAFVEFYTHAEAVESMRYVN----------------------GTKLDERIIRCDLDPGYKEGRQYGRGRSGGQVRDEYRKEY 142
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BLAST of jgi.p|Trimin1|354608 vs. uniprot
Match: A0A1W0A133_9STRA (Nuclear cap-binding protein subunit 2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A133_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.170e-33
Identity = 82/173 (47.40%), Postives = 98/173 (56.65%), Query Frame = 1 
Query:    7 ELYA-----VDPPGKIYWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQIAELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRHSCDALAAIRDISXXXXXXXXXXXXXXXXXXXXXXGTCLDERIIRAELDPGFQDGRQYGRGTSGGQVRDER 510
            ELYA     V P  K YWDR+TYAS E+   A+K S TLY+GNLSF+T+E QI ELFS                  G +  VIMGLDR ++TPCGF FVEY +   A A    IS                       T LD+R+IR ELD GF++GRQYGRGT+GGQVRD+R
Sbjct:    2 ELYASLTEGVGPKKKEYWDRQTYASLEEQQEAMKQSSTLYVGNLSFFTSETQIYELFSVV----------------GPVRAVIMGLDRIKKTPCGFCFVEYFNKDHAQACANFIS----------------------STKLDQRVIRCELDGGFREGRQYGRGTTGGQVRDDR 136
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BLAST of jgi.p|Trimin1|354608 vs. uniprot
Match: A0A0N7L479_PLAHL (Nuclear cap-binding protein subunit 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L479_PLAHL)

HSP 1 Score: 137 bits (344), Expect = 3.270e-33
Identity = 79/180 (43.89%), Postives = 103/180 (57.22%), Query Frame = 1 
Query:    1 MAELYAV----------DPPGKIYWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQIAELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRHSCDALAAIRDISXXXXXXXXXXXXXXXXXXXXXXGTCLDERIIRAELDPGFQDGRQYGRGTSGGQVRDER 510
            MAELYA            P  + YWDRKTY+SF++   +++ S TLY+GNLSF+T+EAQI ELFS+                 G + RVIMGLDR ++TPCGF FVEY  + +A A  + +S                       T LD R++R E+D GF++GRQYGRG SGGQVRD+R
Sbjct:    1 MAELYAEVADEERRLERGPSQRQYWDRKTYSSFDEQQRSIERSSTLYVGNLSFFTSEAQIYELFSRV----------------GYVKRVIMGLDRFKKTPCGFCFVEYSKNVEAKACAQFLSE----------------------TKLDNRVVRCEMDGGFREGRQYGRGLSGGQVRDDR 142
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BLAST of jgi.p|Trimin1|354608 vs. uniprot
Match: A0A8K0NMJ6_9TREE (Uncharacterized protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0NMJ6_9TREE)

HSP 1 Score: 135 bits (341), Expect = 5.560e-33
Identity = 79/161 (49.07%), Postives = 95/161 (59.01%), Query Frame = 1 
Query:   40 YWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQIAELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRHSCDALAAIRDISXXXXXXXXXXXXXXXXXXXXXXGTCLDERIIRAELDPGFQDGRQYGRGTSGGQVRDERNKQY 522
            Y D K   S E     L  S TLY+GNLSFYTTEAQI E+FS+  +           S+ G + R+IMGLDRN +TPCGFAFVEY    +ALA++R IS                      GT LDERIIR +LDPG+++GRQ+GRG SGGQVRDE    Y
Sbjct:   14 YKDNKNRVSREDERNQLANSTTLYVGNLSFYTTEAQIYEIFSQCAEP----------SEGGGIKRIIMGLDRNNKTPCGFAFVEYYLHSEALASMRYIS----------------------GTKLDERIIRCDLDPGYKEGRQFGRGKSGGQVRDEYRDDY 142
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BLAST of jgi.p|Trimin1|354608 vs. uniprot
Match: A0A1E4TCJ9_9ASCO (Nuclear cap-binding protein subunit 2 n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TCJ9_9ASCO)

HSP 1 Score: 133 bits (334), Expect = 9.250e-33
Identity = 80/174 (45.98%), Postives = 96/174 (55.17%), Query Frame = 1 
Query:    1 MAELYAVDPPGKIYWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQIAELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRHSCDALAAIRDISXXXXXXXXXXXXXXXXXXXXXXGTCLDERIIRAELDPGFQDGRQYGRGTSGGQVRDERNKQY 522
            +  +  +D P   Y  RK     E     L+ SRTLY+GNLSFYT+E QIAELF +A                GE+ R+IMGLDR  +TPCGF FVEY     AL  ++ IS                      GT LDERI+RA+LDPGF+DGRQYGRGT+GGQVRDE    Y
Sbjct:    5 LTSVKRIDGPS-AYMIRKCSRQGESAYKILQDSRTLYVGNLSFYTSEEQIAELFKEA----------------GEIKRIIMGLDRFEKTPCGFCFVEYFDHESALRCLKYIS----------------------GTKLDERIVRADLDPGFEDGRQYGRGTTGGQVRDELRVDY 139
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BLAST of jgi.p|Trimin1|354608 vs. uniprot
Match: A0A1X2HUM5_SYNRA (Nuclear cap-binding protein subunit 2 n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HUM5_SYNRA)

HSP 1 Score: 134 bits (338), Expect = 1.340e-32
Identity = 76/161 (47.20%), Postives = 93/161 (57.76%), Query Frame = 1 
Query:   40 YWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQIAELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRHSCDALAAIRDISXXXXXXXXXXXXXXXXXXXXXXGTCLDERIIRAELDPGFQDGRQYGRGTSGGQVRDERNKQY 522
            Y D +   + +Q    L  + TLY+GNLSFYTTE QI ELFSKA                GE+ R+IMGLDRN++TPCGF FVEY H  D L  ++ ++                      GT LDERIIR +LDPGF++GRQYGRG SGGQVRDE   +Y
Sbjct:   15 YRDNQYQGTADQFDNELSQTTTLYVGNLSFYTTEEQIYELFSKA----------------GEIKRIIMGLDRNQKTPCGFCFVEYYHRADTLDCMKYVN----------------------GTKLDERIIRCDLDPGFKEGRQYGRGHSGGQVRDEYRTEY 137
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BLAST of jgi.p|Trimin1|354608 vs. uniprot
Match: A0A1Y2BDA5_9TREE (Nuclear cap-binding protein subunit 2 n=1 Tax=Naematelia encephala TaxID=71784 RepID=A0A1Y2BDA5_9TREE)

HSP 1 Score: 135 bits (340), Expect = 1.450e-32
Identity = 79/174 (45.40%), Postives = 102/174 (58.62%), Query Frame = 1 
Query:    1 MAELYAVDPPGKIYWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQIAELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRHSCDALAAIRDISXXXXXXXXXXXXXXXXXXXXXXGTCLDERIIRAELDPGFQDGRQYGRGTSGGQVRDERNKQY 522
            MA++ A+      Y D ++    E     L  S TLY+GNLSFYTTEAQ+ ELFSK  + E            G + R+IMGLDRN++TPCGFAFVEY    +A+A +R IS                      GT LDER+IR +LDPG+++GRQ+GRG SGGQVRDE  ++Y
Sbjct:   21 MAQVVALLDQPSSYRDNRSELDRETERRLLALSSTLYVGNLSFYTTEAQMYELFSKCARPEY----------GGGIKRIIMGLDRNQKTPCGFAFVEYYLHTEAVACMRYIS----------------------GTKLDERVIRCDLDPGYKEGRQFGRGKSGGQVRDEFRQEY 162
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BLAST of jgi.p|Trimin1|354608 vs. uniprot
Match: A0A127Z7I0_9BASI (Nuclear cap-binding protein subunit 2 n=2 Tax=Sporisorium scitamineum TaxID=49012 RepID=A0A127Z7I0_9BASI)

HSP 1 Score: 135 bits (341), Expect = 1.510e-32
Identity = 79/171 (46.20%), Postives = 105/171 (61.40%), Query Frame = 1 
Query:   10 LYAVDPPGKIYWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQIAELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRHSCDALAAIRDISXXXXXXXXXXXXXXXXXXXXXXGTCLDERIIRAELDPGFQDGRQYGRGTSGGQVRDERNKQY 522
            L  +D P   Y D ++  + EQ + AL+ + TLY+GNLSFYTTE QI E+FS+         +A L S  G + R+IMGLDRN +TPCGFAFVE+    +A+ ++R ++                      GT LDERIIR +LDPG+++GRQYGRG SGGQVRDE  K+Y
Sbjct:    5 LQPLDAPSP-YRDSRSDTTKEQQLQALRKTATLYLGNLSFYTTEEQIYEVFSR---------VASL-SSGGGIKRIIMGLDRNTKTPCGFAFVEFYTHAEAVESMRYVN----------------------GTKLDERIIRCDLDPGYKEGRQYGRGRSGGQVRDEYRKEY 142
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BLAST of jgi.p|Trimin1|354608 vs. uniprot
Match: A0A0L6UBT2_9BASI (Nuclear cap-binding protein subunit 2 n=7 Tax=Puccinia TaxID=5296 RepID=A0A0L6UBT2_9BASI)

HSP 1 Score: 133 bits (335), Expect = 1.650e-32
Identity = 78/161 (48.45%), Postives = 92/161 (57.14%), Query Frame = 1 
Query:   40 YWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQIAELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRHSCDALAAIRDISXXXXXXXXXXXXXXXXXXXXXXGTCLDERIIRAELDPGFQDGRQYGRGTSGGQVRDERNKQY 522
            Y D ++  S+E     L  S T+Y+GNLSF+TTE QI ELFSKA   +                R+IMGLDRN +TPCGF FVEY    DALA +R IS                      GT LDER+IRA+LDPG+ DGRQYGRG SGGQVRDE  + Y
Sbjct:   14 YRDSRSPLSYEDQQLQLSRSSTVYVGNLSFFTTEEQIFELFSKAALIK----------------RIIMGLDRNSKTPCGFCFVEYYRPEDALACLRYIS----------------------GTKLDERVIRADLDPGYLDGRQYGRGKSGGQVRDEYREDY 136
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354608 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXB9_9STRA6.410e-198100.00RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A0F7RWA3_9BASI1.700e-3346.20Nuclear cap-binding protein subunit 2 (Fragment) n... [more]
A0A1W0A133_9STRA3.170e-3347.40Nuclear cap-binding protein subunit 2 n=1 Tax=Thra... [more]
A0A0N7L479_PLAHL3.270e-3343.89Nuclear cap-binding protein subunit 2 n=1 Tax=Plas... [more]
A0A8K0NMJ6_9TREE5.560e-3349.07Uncharacterized protein n=1 Tax=Filobasidium flori... [more]
A0A1E4TCJ9_9ASCO9.250e-3345.98Nuclear cap-binding protein subunit 2 n=1 Tax=Tort... [more]
A0A1X2HUM5_SYNRA1.340e-3247.20Nuclear cap-binding protein subunit 2 n=1 Tax=Sync... [more]
A0A1Y2BDA5_9TREE1.450e-3245.40Nuclear cap-binding protein subunit 2 n=1 Tax=Naem... [more]
A0A127Z7I0_9BASI1.510e-3246.20Nuclear cap-binding protein subunit 2 n=2 Tax=Spor... [more]
A0A0L6UBT2_9BASI1.650e-3248.45Nuclear cap-binding protein subunit 2 n=7 Tax=Pucc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_288contigContig_288:48706..60063 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354608|estExt_Genemark1.C_Ctg_2880006
BRITEko00000,ko00001,ko00002,ko03019,ko03041
KEGG ModuleM00399
KEGG Pathwayko03013,ko03015,ko03040,map03013,map03015,map03040
KEGG koko:K12883
GOsGO:0000184,GO:0000339,GO:0000340,GO:0000375,GO:0000377,GO:0000394,GO:0000398,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005681,GO:0005737,GO:0005829,GO:0005845,GO:0005846,GO:0006139,GO:0006351,GO:0006353,GO:0006354,GO:0006366,GO:0006368,GO:0006369,GO:0006370,GO:0006379,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006406,GO:0006408,GO:0006417,GO:0006446,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008104,GO:0008150,GO:0008152,GO:0008334,GO:0008380,GO:0008543,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009301,GO:0009452,GO:0009719,GO:0009889,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0012505,GO:0014070,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0016071,GO:0016073,GO:0016246,GO:0016441,GO:0016458,GO:0017069,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0023052,GO:0030422,GO:0031047,GO:0031050,GO:0031053,GO:0031123,GO:0031124,GO:0031323,GO:0031325,GO:0031326,GO:0031440,GO:0031442,GO:0031503,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032239,GO:0032241,GO:0032268,GO:0032386,GO:0032388,GO:0032774,GO:0032879,GO:0032991,GO:0033036,GO:0034248,GO:0034399,GO:0034470,GO:0034518,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034660,GO:0035194,GO:0035195,GO:0035196,GO:0036260,GO:0040029,GO:0042221,GO:0042795,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043331,GO:0043900,GO:0043901,GO:0043903,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045069,GO:0045071,GO:0045184,GO:0045292,GO:0045935,GO:0046483,GO:0046700,GO:0046822,GO:0046824,GO:0046831,GO:0046833,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048525,GO:0050657,GO:0050658,GO:0050684,GO:0050685,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051028,GO:0051030,GO:0051049,GO:0051050,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051252,GO:0051254,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060341,GO:0065007,GO:0070013,GO:0070727,GO:0070848,GO:0070887,GO:0070918,GO:0071166,GO:0071310,GO:0071359,GO:0071363,GO:0071407,GO:0071426,GO:0071427,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071774,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0097064,GO:0097159,GO:0097659,GO:0098781,GO:0098787,GO:0098789,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901698,GO:1901699,GO:1903311,GO:1903313,GO:1903900,GO:1903901,GO:1990904,GO:2000112
Preferred nameNCBP2
DescriptionRNA cap binding
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0121@1|root,KOG0121@2759|Eukaryota
Evalue2.93e-34
Seed ortholog653948.CCA22585
Hectar predicted targeting categoryother localisation
TranscriptId354930
TrackFilteredModels1
ProteinId354608
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354608gene_18800Tribonema minus UTEX_B_3156 geneContig_288 48706..60063 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354608Trimin1|354608|estExt_Genemark1.C_Ctg_2880006Tribonema minus UTEX_B_3156 polypeptideContig_288 49209..60063 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18800_14exon_18800_14Tribonema minus UTEX_B_3156 exonContig_288 48706..49517 -
exon_18800_13exon_18800_13Tribonema minus UTEX_B_3156 exonContig_288 50653..50800 -
exon_18800_12exon_18800_12Tribonema minus UTEX_B_3156 exonContig_288 52009..52051 -
exon_18800_11exon_18800_11Tribonema minus UTEX_B_3156 exonContig_288 52511..52657 -
exon_18800_10exon_18800_10Tribonema minus UTEX_B_3156 exonContig_288 53389..53446 -
exon_18800_9exon_18800_9Tribonema minus UTEX_B_3156 exonContig_288 54154..54225 -
exon_18800_8exon_18800_8Tribonema minus UTEX_B_3156 exonContig_288 55711..55804 -
exon_18800_7exon_18800_7Tribonema minus UTEX_B_3156 exonContig_288 56499..56531 -
exon_18800_6exon_18800_6Tribonema minus UTEX_B_3156 exonContig_288 56931..56963 -
exon_18800_5exon_18800_5Tribonema minus UTEX_B_3156 exonContig_288 57288..57406 -
exon_18800_4exon_18800_4Tribonema minus UTEX_B_3156 exonContig_288 58694..58714 -
exon_18800_3exon_18800_3Tribonema minus UTEX_B_3156 exonContig_288 59085..59111 -
exon_18800_2exon_18800_2Tribonema minus UTEX_B_3156 exonContig_288 59200..59317 -
exon_18800_1exon_18800_1Tribonema minus UTEX_B_3156 exonContig_288 60014..60063 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_18800UTR3_18800Tribonema minus UTEX_B_3156 three_prime_UTRContig_288 48706..49208 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18800CDS_18800Tribonema minus UTEX_B_3156 CDSContig_288 60014..60063 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18800 ID=mRNA_18800|Name=jgi.p|Trimin1|354608|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1775bp|location=Sequence derived from alignment at Contig_288:48706..60063- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGAGCTGTATGCCGTCGATCCGCCTGGTAAAATCTACTGGGACAG
GAAAACCTACGCGTCATTTGAGCAGCACGTGGCAGCGCTCAAGGGGAGCC
GCACGCTTTACATCGGCAACCTCTCGTTCTACACAACGGAGGCGCAGATA
GCGGAGCTCTTCTCTAAGGCGCAGAAAGCGGAGCTCTTTTCCAAGATAGC
GGAGCTCTTCTCCAAGACGGGGGAGCTGCTGCGCGTGATAATGGGGCTCG
ACAGGAACCGGCGCACGCCGTGCGGCTTTGCGTTTGTGGAATACCGCCAC
AGCTGCGACGCACTTGCAGCCATACGCGACATCAGCTGCGACGCGCTCGC
CGCCATACGCGACGTCAGCTGCGACGCGCTTGCAGCCATGCGCGACGTCA
GCGGAACGTGCCTCGATGAACGAATCATTCGCGCTGAGCTCGACCCGGGC
TTCCAGGACGGGCGGCAGTATGGCAGGGGGACCAGCGGCGGGCAAGTTCG
AGACGAGCGCAACAAGCAGTACGGCGGGGTTGACCTCGCACGGCAGGCGC
CGCCCATGGACTCACAACTGGGGTTTGCAGGGCTGGCCCCCCAGCTCTCG
GAGGTGGCAACCACGGCACTCACAACCGCCACAAGCACGGCGGCGGCGGC
GGCGGCGGCGGCGGCGGCGACGCAGCACACGGCCACCAACACACTTCTCC
CGCCGCACACGCCGGCGGCCGCGACCAAGTGGACGAGTTCGGACGCGCAC
TGCCCTCCAAGAGACCGCGAGATGGATGAGTTCGGGCGCGCGCTGCCCTC
CAAGAGACAGAGAGAACCCTCTGTTGAGACCGCAGCAGCAGCTGCATCCC
CACCCGCAGCAGCGGCAGCAGCAGCGGCAGCTGCGCCGGAATCTGCAGCA
GCAGTGGCAGCAGCGGCGCCGGCTGAACCTGCGCCTATGGACGCTGGCGC
CGAGGAGGTCAAGGAGTTGAGCCCGCCAGAAGCCGCTGCTGCCGAGGACT
TGAGCACTGGCGCGAAGAAACGCGCACGCGATGACGATGCCGACGCCGAC
AACGATGAAGCAGCACAGCTCAGCAAGCGCAGCAAACTCGACGAAAACGA
CATGCTGGCCAAGGAAACGGAGGCAGCGGCAGCGGACACCGCCGCTGCTG
CCGCAACCGCTGCTGCCCCAACCGCTGCTGCCGCAACCGCTGCTGCCGCA
ACCGCTGCTGCCGCTGCTGCTGACGCTGCGCCCGATGCCGCTGCCGCCGC
CGCCGCCCCTGAAGCCGAATAGCAGCGCCGCGTTGGGCTGCGTCAATACA
TTGCGTGGGGAGTTGAACTTGACGACGCATATGTCAGAATGACGCGCTGG
CGCGCTGGCAGAATGCGGATTCGACGCGAGGTTTGCAGCCGCGAGCAGCC
GATATTCGCGGATGGCGTGACCTACCGACGGAGCGCGGACCGGGCATGCA
ACAAGTAGGGTTAGGGTTTGGCCCTGAGGCGGCGCTCCCCCACTGTTCCT
CACGTCACTGGTGTCGCACTTTGATGGGGACGCCCCCAAGCGTGCGGGGT
GCCTCTGCACGCAGCAGCGGCGGCAGCAACGCTGCGCGGGTAGCACGGAT
ATGCTTGCGCAGCCGCTGTCCGGGCATTGAGTTCATGCGAGCGCTGCATG
TGTTGATCACTGCTGCAGCGAGCAATCCGAAGCAGTCACAGTGTCATTGA
AGCCAGGATCATTCACCAGCTTTTGCACGCGCGTTGCTGCTCATTTCACG
GCGGCAGAATGTGACGGTCGCAAAC
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protein sequence of jgi.p|Trimin1|354608

>Trimin1|354608|estExt_Genemark1.C_Ctg_2880006 ID=Trimin1|354608|estExt_Genemark1.C_Ctg_2880006|Name=jgi.p|Trimin1|354608|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=424bp
MAELYAVDPPGKIYWDRKTYASFEQHVAALKGSRTLYIGNLSFYTTEAQI
AELFSKAQKAELFSKIAELFSKTGELLRVIMGLDRNRRTPCGFAFVEYRH
SCDALAAIRDISCDALAAIRDVSCDALAAMRDVSGTCLDERIIRAELDPG
FQDGRQYGRGTSGGQVRDERNKQYGGVDLARQAPPMDSQLGFAGLAPQLS
EVATTALTTATSTAAAAAAAAAATQHTATNTLLPPHTPAAATKWTSSDAH
CPPRDREMDEFGRALPSKRQREPSVETAAAAASPPAAAAAAAAAAPESAA
AVAAAAPAEPAPMDAGAEEVKELSPPEAAAAEDLSTGAKKRARDDDADAD
NDEAAQLSKRSKLDENDMLAKETEAAAADTAAAAATAAAPTAAAATAAAA
TAAAAAADAAPDAAAAAAAPEAE*
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mRNA from alignment at Contig_288:48706..60063-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18800 ID=mRNA_18800|Name=jgi.p|Trimin1|354608|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11358bp|location=Sequence derived from alignment at Contig_288:48706..60063- (Tribonema minus UTEX_B_3156 )
ATGGCGGAGCTGTATGCCGTCGATCCGCCTGGTAAAATCTACTGGGACAG
GTGAGGACCGTCACGTCTACGCCAATTTGCTGGCGATCCGCTGCTTCACC
TGAACAACATTGGTGCACATGATGTCTGCTTGAAGTGAATAAATTATGCA
CACCCCGGGTACAACTCCATAGTGCTGCAAAGTAAGACAAATGGTCGCCC
TATACATGGGTGTTGGTTCTGCATTTAGCAAGCTTCATCGCTAGATCGTA
CCAAGTGGCACTTTCAAAGACAAGGTCAATAGCGGCAACATCTGCTAGTC
GAGCTGCGGCGCGGGTGTGCATCACCTCCAGTAAAAAGCGAACAACCATC
GTGATCTCATAGTCACAAGGTGCACAATTGTGGCTCTTGCCATGAATGCA
CCCGTCTGATTGTTTGCGTCCAAAAACGCGCACATAGTTCAAGCCTTGGC
ACTTTTTCTGAGGAGGCAAACGTATGCGTCATTCAAAAGCGTGCGTACAC
CTCAAGCCTTACATCGTGTTTATCGCGGTGGTTTTTGCTGAGCAGGAAAA
CGCACGCGTAGTTTGAGCAGCATGTGGCAGCGCTCAAGGGGCGCCTAATC
CTAACCCTCACCCTAGAGCTCAAGCCTCATTGGAGCAGCGCTCAACAACA
ATGCACCCATTTGTGACGCTGACTTTGGGTTTGGGCTTGCGTCCAACAGC
GTGCGCAGAGCTCATGCCTCAGTGTGTCGTTGCATTTACTGAGCAGGAAA
ACCTACGCGTCATTTGAGCAGCACGTGGCAGCGCTCAAGGGGAGCCGCAC
GCTTTACATCGGCAACCTCTCGTTCTACACAACGGAGGCGCAGATAGCGG
AGCTCTTCTCTAAGGTGCGTTCCTACAGGGGGTGTCATCACATGTTAACA
CTATTAGCCTTGACACACTAACCCTATCAACCTCTCATTTCACTACACGG
AGGCGCAGAAAGCGGAGCTCTTTTCCAAGGTGCGTACGGCACCCATTCAC
TAAAGACCAGTATTTCTCATACTTCAAGTAGCACATGACTTGAAGGTGGT
CTATTGTACGGCAGCCATTCACAAACGACACACACCACTGTGATTTCTCA
TACTTGACACTTGAAGTAGCATATGACTTGCGAGTAGTCCTGGGAGCACT
TGAGACGTGAAGATTTTCGCAGCAGAGTTCTTCTCTCAGTGCGTAAGGGG
GCGTAAAAGGTCATGATGTAGGGGCGGTCACAGAGAGGAGTCTGACGGCT
GAACACATGCGGCCAATAAGTCAAATGTTGACATGCTAACCCTATTAAGC
TTGACACGCTAACCCTATTACACTCTCACTGTACACCACGGGGGCGCAGA
TAGCGGAGCTCTTCTCCAAGGTGCGCATCGCTGCCCATTCTCATACACTC
ACACAGACATGCGTCGGTGCCATCACCGCTGCCATAACGCCGCGCTGTCT
TAGGGGTAGGTTACTGTGTGATAGGGGGCATCGCTCAACACCTTTACTAT
GCTGCCCGCTTCTGGTACCTACCTACCTACACCTTTTTCATCACCGCACC
CCATGACGCACTATGGTGTGAGAAGGAGGGAGGGAAACAGCTGCTGCATC
AGCGCCCAGACTTACCGGGGGCATTGCTCAACACCTTGACCGTTCGCTGT
GTGATAACCTTAAATCACGGGGTATAAGATAGTACCTCTGTGTAAGAAAC
GGGTATCTTACACACCGTAGAAGATACCTCTCCCCATAGCATGTTGACGG
GGTGTGTATGTAAGATGCTAGGCTTGCTGTATAAGATACCCCCTTTCTTA
TACGCCGTATAAGAAACCCGTAATTTAGAGGGCCAAAAAGCTGGCGTTGT
CAAGGAACGGGTGTCTTATATGATTTGCGGTACTTCAAAGCTGCGGGCAG
CTGCTGAGCACTGTGATGGTTTCCTCAGTCCCTGGACCGTTCCTTGCCCT
GCTGCATCAGTGCTCAGGCTGCTGCTCAGGACCGGAGAGCTGGATGTGAG
AGTCTCGAAGCACATGAGTATGACGTATGGCCAGATGGTGCTGCATAGCG
GCGATGAGAGCTGCCACACTTCAACATGAACTTCAACAGCCCTTGACCCC
TTTTTTTATCCTTACAACTTGACGCTTGAACCGAGCGCGCTGCTGCTGCC
GCTGCATCAGTGCTCAGGCTGGTGGGCGCTGCCGCTGTACATACAAGCCA
TCCGACCAATGACCGGGCCTCTCGTGTGCTAGGAGAGCTGCCACACTTCA
ACATGAACTTCACGAGACCTTAATGCTCCTGACAACTTGACCGTCGGACT
GATGCGTGCGCGCTGCGCCGCCGCTGCCACCGCCGCTGCCACCACCACTG
CTGCTGCTGCTGCCGCCGCAGCTGCTGCTGCTGCTGCCGCTGCTGCCGTC
AGATAGGGGGGCTGCTACGCATGATCGCGGGGCTGGACAGCAGCAATACA
TACATACCATCCAACTGATGACCCGCACCTCTAGATAGTGTGCCTTGGCA
GAGCAGAGCGCTGCCGAATGTCGATGCGGTTAAACAGCACTTGACTGTGT
ATATCACGCTGACTTGACGCTTAAAACGCTGCGCGCCTGGTGCCTGCTGT
TGCTGCCGCTGCCACCGCTGCTGCTGCCGCTGCCGCCGCCGCTGCTGCTG
CCGTCAGACGGGGGAGCTGCTGCGCGTGATAATGGGGCTCGACAGGAACC
GGCGCACGCCGTGCGGCTTTGCGTTTGTGGAATACCGCCACAGCTGCGAC
GCACTTGCAGCCATACGCGACATCAGGTCAGTGCAGCTGGCTCAATTTCG
GTTCATTTGTTCGCAATGTTGTATATTGTGTAAATGTGTACATACATAGA
TATGCACGAGTACTTGGTGAAGTACAATTGGCGCACGCCTAGCAGCTTTG
CTTTTGTGGAGTATCGCCACAGCTGCTACGCACTTGCAGCCATGCGCGAC
GTCAGGTACGTATACGAGACTCGATGTCCAGTTCGCCTTTTCTCATGGAA
GTACATGCATATCAGACGTACATGCACGCACGAGTACTTGCTTAATATCA
CGAGAATTGGCGCACGCCTTGTGGCTCTGCTTTGTGGAATACCGCCACAG
CTGCGACGCGCTCGCCGCCATACGCGACGTCAGGTCAGTGCAGCTGGCTC
ACAATCTCTGGTGTATCTGGTGACAAGTTTGTATATTATGTGAGTGTGTG
AATACATACTTGTACGAGCGTTTGGTGAATATTACTAGAAACGGCTCACG
CCTTGCAGCTATTCATTTGTGGAGCACCATCACAGCTGTGACGCGCTCGC
CGCCACACGCGACGTCAGGTCAGTGCATATATGCCAATGACACATATCAT
ATTCATGCTGAAGACGTATCAATGTAGCCACAGTTACGATGCGCTCGCCG
CCATACGCGACGTCAGGTCAGTGCATATATAGTAATGACACGCAATACAA
CAAAAGGACTAGAGCTCTACGATCTTTTCTTTCGTTTCTGTAATGCTAAC
GCCGTATCAATATAGCATTACTGGTGCCACAGCTGCGACGCGCTTGCAGC
CATGCGCGACGTCAGGTCTGTGCAGCTGGCTTGATTTCCAGTTCATTTGT
TCACCAGTTTGTATATCATGTGAACGTGTGCATGCATACACATAGGCACG
TGAAGTAAAGTAGCACTACGTACACCTGACACCTGTGCGTGGCTTCATTC
TTCTGTGCGGTCGTTACTATAGCTATACTTCAAGCGAAATATTAACAACG
ATCTTTTGATTCGTTTCTCATTAACATTATATATCTATTTAATCTGCATG
TTTATTCCCATGTGCGGGCACCTGTTCTTCAGCCCCAACCCTCCTCTTCT
TCTGTGATTCATCTGATGCCTGTTTGTCTAACCCTAACCCTAACCCTCTT
ATTCTTCCGTGTGGCTGTTACAGCAGAAAGTGCTTCGACGAGCGCATTGT
CCGCTCAGCAGCCCCCCCCCGTACATGTCATACCTACATACCCCTCCGTT
TCTGCTGGTGCGCTGCTGCAGCATTGCACCCTCATGCACGCCAATAAACA
TCACTCCCATCTTGCAGCCTCGTCCGCTCCGCTGCTTTTTCACTGCTTTT
TCACCACTGCACCTGATACCTGCTCCTTATAATTCTGTGCGGCCGTTACA
GTGGAACGTGCCTCGATGAGCGCATCAGTCGCACTGAGCTCGACTTGAAA
CCATCAATCCATTCATAAATAAGTAGTAAAAGGACTCTTCTTCTTTGCTG
TCATTACAGCGGAACGTGCCTCGATGAACGAATCATTCGCGCTGAGCTCG
ACCCGGGCTTCCAGGACGGGCGGCAGTATGGCAGGGGGACCAGCGGCGGG
CAAGTGAGTCTGAGTCCCTACATGAGTCAAGTCCAAGTCACCGAGTTATT
TTTATCAAGCCATTTGAAAGCATCAGGTCCAAGCCGTTGAGTCATGAGTA
TCATGTGGTTCAAAGTACTTCTGCTTCAGTATGAGTCCTCAAGTCATGGA
GTCGTTTCCATCTGTGGTTCGAAGTACTGATACTTGAGTATGAGTCATCA
AGTGGTCGAGTGATTTCTGTCATGTGGTTCAGTGTCATGCAATAAGCATT
TGAACCGATGACAGCTTGCATGCCTCGTCGGCGGTGGGAATGGGCACCAT
TGCTGCCATCGCCTAGCTGTCAGGAAATTTGAATATTCAGTTTGCTCTTT
TGGCGACAACAGTGCTGCTTTTGAAACACTGATGGTCGCCGTCGTCACGA
ATCAAAACAACAGTCAAAGGCGCGGTCAGGTTGTCGCCATGCGAGGGCAG
TCGATGCAGCCCCCATCATTCACGGGGGTAGGCGTAGGTGAAAATGGGCG
AATCACTGGTGCAGTTGTTCGAAACGCAGCACCGAATGTACTGCAAGTAG
TAGCAGGGCATCGACCATGAACATCTTAGAGGCAGGGGGTCAGGGTGCAA
CATGCTGCACTTGAAGATTGCTCAGGCCAGGCATGTGTACGGAACATGAT
GCTGCTGTTGATATATACATGCAGACCTCTTCCGCTGCAGGTCTGGCTGC
AACCCTATCCCCAACCCTACATGAGCGGAACAAGCAGCGCGAGCCAGTAG
AAACGTCGCAACACTCCAAGCAAGTTTTTTGCAAAGTGCATGTGAAGCAT
ATGTGATTCCTGCTCATGATGCACATCAAAGATATCCCGCTGCTGATATA
ATGGATAACGAATCAAAAAGATCGTTGAGCTCTAGGTGACAAGGGATGGT
TAGCCGCAAGTGCCTTCCACCAATAACCGTGGTTGCCGCTGCTGCAGTCA
TTGGCCACGAGTCAAACAGTGCCACCATATAATTTTCTTTTTGTCAAATA
GTTTGAGATGAGTGCAACACGCGGTACGGCGGGGTCCACTTGCAGGTACA
ACAACACTTCAAAGCAAAGCACAAGCGTGCATCGTGTTAACGCGCCCTGC
TGATTATGATTATACACCACAAATCTGAACGTGTGGGTTCCACATGGTTC
CTGTTGCAGGTCCGAGACGAGCGCAACACAGCACGAGCTAGTAAAAGCAT
AGCAATACTCCAAAGCAAGTACATGTAGCGTGCGAAGTGCACATGAAGCA
CGTGTATTCTGCTCATAATGCACGTCAAAGGGATCCCGCTGCTGATACAA
CATTTTTTTTTCCGTCAACAGGTTCGAGATGAGCGCAACAAGCAGTACAG
CACCAGCTAGTAGGAAGCATGTAGCAACTCCAATGCAAGATGTCCCGTGC
GATGTGCACATACAACAATTTGTGAATCTTATTATTGTACTCATAATAGA
GATCCCGCCGCTGATGCACATCTTTTTTTCGTCAACAGGTTCGAGACGAG
CGCAACAAGCAGTACGGCGGGGTTGACCTCGCACGGCAGGCGCCGCCCAT
GGACTCACAAGTGAGTGCTTGAGTAAAAAGGGTGACTCATTGACGCACAA
GTGACTGCTCGAGTAACTGCGTGTCGCAGCGAGTCGCAAGCAGGCACGGC
AGCGCTAATGAATAATGAATCGAAGATTAAAATGGCCATTTGGGAGGGGG
AGGGGGGGGGAGGGGGGTCCGACCTTGGGTGGCAGGTGCCGCTCATGGAC
TCACAAGTGAGTGCTTCAGTAACTGAGTGACTCATTGACTCAAAAGCTAC
TGCTCGAGTATCTGCGTGTCGCAGCGAGTCGCAAGCACGCACTGCAGCGT
ATCATGACTTGCAGATGAAGCCGACCTGTTAAGGGGGCGGGGGGGGGGGG
GGGTGCTTGCAGGGTTGGCCTTGCGTGGCAGGCGCACCTCACAAGTGAGT
GCATGAGTGACTTGTGGACTCACAAGTGGGTGTAGAGCAAATGAGCGCCT
CAGCGGCTCGCAAGTAAGCATGGCAGCACTTGATGAGTTGCAGACGAAGC
AGACCTGTTAAGGGGGCGGGGGGGGGGGGGGCGCTTGCAGGGTTGGCCTC
GTGCGGCAGGCGCCGCCCATGGACTGTGAGACTCAGATTGGTCGGGTGAG
TCAGTGAGTCGGCAAGCAGGCTTCACAGCTGTCGATGAATGCAGTTGGCA
CTGCACATACTTTGAAGTACGCCGCACACGGCACACATACAATAGGGACG
CGTGCTGTTTGGTGGAGCTGGGGTTTGCAGGGCTGGCCCCCCAGCTCTCG
GAGGTGGCAACCACGGCACTCACAAGTGAGTGAGTGAGTAAATGAGTGCG
TGAGTGTATGCTTGGGTGAGAGTGTTAAGAAGCACGTGCGCTGCGCAGTG
CTCATGCAAGGGGCACGCTCCCTGACGAACGAGATGGGGATAATCTGACC
CCGCAGGCCATCGATAGCTGCAGTTACAGCTACAGCTACAGCTGTAACTG
CGTAAATTACGCTCCGGTGCGCAGCGCCTGCTGCTGCCGCTTGCTCCTGG
CACACGTATGGTATATTGCGTATGCTTGACGTGACATACTGTGCAGTATC
ACACAAGGGAGTATGCCTGCTTACCCCACCCAACCCTAACCCTAACCCTA
ACTTCAACCCTAGATCACATGCGACGGGGACAGCGCGTGGAAATGGCGAT
CTGAGACCACATTGCATCAGCATATATGAACCTTGTGCCATGCAGGAGCA
AATGCTCTGTTCCGCAGCGAGCTCGAGCCGCTGCAAGCCTGAACTCCAAA
CATGCTTCATGATGAAAGCTTGTGACGACGTTTCTGAACTCTGTGCATGC
AGGAGCACTTGCACTTCGCCGCTGCCACAAGCCCGAAGTCCATATGGCAT
GCTTGGGAAGGAAGCGAAGGCAACTCCCATTCATGAGATGAATGTAACTT
GATTATTTTTAAATAGAGCTGTACAATCTTGTGATTCGATCCCAACTGCC
ACCATTGAACTTTGCACCGTGCAGGAGCAAATGCAGTTCGCTGCTGCGAG
CTCGAGCCGCCACAAGCACGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCG
ACGCAGCACACGGCCACCAACACACTTCTCCCGCCGCACACGCCGGCGGC
CGCGACCAAGTGGACGAGTTCGGACGCGCACTGCCCTCCAAGAGACCGCG
AGAGTGAGTTTGGAAATTGAAGTTCAACTCCGACTCGTAGCTTTCCAGTT
TGACTCACGTGCGCCGTGCATCATGCATGTTGTGTTGGCGGCCACATACT
TCAACTTTGAAATTGTGCATGCGACCATGTGGAATGGGTTAGGGCGCGCG
CTGCCCTCCAAGAGACCGAGAGAGTGAGTGCAAGTATTGTTTTTGTGTAC
TTCAAGTTGAAGTATGGCTGTTTGAGGTAGCGGCGACGCGGAACACGCTC
ACCAACACGCTCTCCTCTGCCGCCCATGCCGGCGGCCGCGACCAAGTGGA
TGAGTTCGGGCGCGCGCTGCCCTCCAAGAGACAGAGAGAGTGAGTGCAAG
TATTGTTTTTGTGTACTTCAAGTTGAAGTATGGCTGTTTGAGGTAGCGGC
GACGCGGAACACGCTCACCAACACGCTCTCCTCTGCCGCCCATGCCGGCG
GCCGCGACCAAGTGGATGAGTTCGGGCGCGCGCTGCCCTCCAAGAGACAG
AGAGAGTGAGTTTGAAAAGTGAACATCAACTCCGACTCATAGCTTTTCAA
TTTGACCAAAGTGCGCCGTGAATCACGTTATGAATGTTGTATTGGCCACA
TACTTCAATTGTGAAGTTGTGTATGTGACCAGGTGGGGATGGGTTTGGGC
GCGCACTGCCCTCCAAGAGGCCTCGAGAGTCAGTGCGAGCATGAGTTTTT
GTATACTCCTCCTTGAAGTATGGCTTTTATGAGCGTGTGTATACTTCAAG
TTAAATCATGGCTGTTTTGAATTAAAGGAAGAAGGGGCTGTGCGACAGAC
CCGTGTTGCTGCGACCAGGTGAATGAGTTCAGCTGCCCTCCAAGAGACCG
AGAGAGTCAGTACATAGTAGTGTTTGTAGCGGAAGTTGAAGTACGGCTGT
TCAAATGAAGGTGAGAAGGAACACGCAACGCGTTGGTATTGCTGCGATAG
AGTCGACGAGTTTGAGTGCGCGTTGCCATCCACGAGGCCACGAGAGTGAG
TGCGTCAGCATAAGTATGTATGTGCTTCAACTTGAAGTTTGGTTGTTGGG
GCAACGGCCCGGTGGACGAGTTTGGGCGCGCGCTTCCCTCCAAGAGACAC
AGAGGGTGAGTTTGAAAACTGAAGTTCAAGTCCGACCCGTGCCTTCAAAT
TCGGCCAAATGCGCCGAGAATCATGTGGGCGGCCACATACTTCAAGTGCA
AAGTTGTGTCTGCAACCCAGGTGGGACGGGTGCGTGCTGCCCTTCAAGAG
GCCGCCAGAGTGGGTGCAAGTATGAGCATGTGTGCATTGCTGTGAGTAAG
TGGACTCAAGATCATTACTGCCTTGATAGTAATCATTACGGCCTTATCAG
CGCGCACTCGCAACGTGCAGCGGTCACGATGCATACTTGCCTACCGCATG
GCTCAAACGTGCGCGCCGCCGTGCCGGCGCGGACACTCCAGCATCGGTGA
AGAGATGTGTGATTGTGGTGTTGTGGGTATGTATGGATCTGCTAATCGTG
TGGTCCGTGGTACCTTCAGAGTATGCCGCAGCTAGAGCAAGCATGAGAAC
ACCACCACGATCATACTGCCTAGTTACTAGATCATGACTGCCTTGCTAGT
AATCACGACTGTTTTATCAGTGCGCACTCTCAACGTGCAGCAGTTGTGAT
GCATACCTACCGCATTGCTCAAACCCGCGCGCCTGCTCTGTCTCATGCGT
TGTGCCTCCGCAGACCCTCTGTTGAGACCGCAGCAGCAGCTGCATCCCCA
CCCGCAGCAGCGGCAGCAGCAGCGGCAGCTGCGCCGGAATCTGCAGCAGC
AGTGGCAGCAGCGGCGCCGGCTGAACCTGCGCCTATGGACGCTGGCGCCG
AGGAGGTCAAGGTGAAGTTCAAGCTGGAGTTGCAGTTGACACCTGACAGC
AGTGCTCAACGGCTGTTGATTGCTGTCGCTTGTTCATGTTGTAGTCGTGG
CAGCGGGAACCCGTGGAGGCACACTCACTTGTGATGTTCGAGTTGAAGTT
GAAGCTCACGGCAGCGCTCAACGGCTGTTGATTGCGGCAGCCACGGCTCC
CGGCTAAACCTCCGCCCTTGCGCCTCGAGGGTTTAGCCCCGCCCTTGCGC
CCCCTTGCGCCCCAAGGGGGTGCTATAAGGGTGAGGCGCATGAGGCTAAA
CTCCCTGCTGTATAGAGCCATTAATAGCCATATCTACAGCAAATCATCGC
TCGGGCGACTCACATGCATCATGCAGAGGACCCAAGAAGCCTCGGAACCT
TTCGCGCGGCGTTTTGCACCCGAAAGGACGCGCAGTGACGTTAGGGTTAG
GGTTAGGGCTAGGGTTTGGGCTAGAGTAAGAGTTAGGATTAGGGTAGTGC
GTGTGTAATTGGAGTGCTTTTCTGGCATAAACATCGCATGGTAAGCACCT
AGCAAGCACCCACTGATGCAAATGTGAACAATGGCGCTTTCAAGCCCCAT
ATTTTCTTGAGCTACAGCGTCAAAGGGTTGCGCCGTTGCGCCTCAGGGTT
AAACCAGGTTTAGCCTCTGGGGGGAGGCTAAACGTGTTGCGCCAACCCCC
ATGTAGTTTAGCCGGGAGCCCTGGCGGCAGCGTCAACCCGTGAAGAGACG
CTTGCGTCGTGGACGTGCGCGTAGCAAAGTTGAGGTTGAAGGTCTGCACC
TGCTGAGGCGGCAGCTGGTGCTTTGTGTGCATGACTTTGAAATAGCCACA
ATTTCCGGGAGTTTGCCTGCAGTCAGTCAGTGATGACACTTTTCTCAAAC
TTCTGCATCTCTTGTCGAGTCTTCGGCTTCAAGTTCAAGTGCAGACAATC
GCCTTCGCCGCACCACGCCAGGTGCCAAGCCCGCCAGAAGCTGCCGCTGC
TGCTGAGGACTTGAGCACTTGCGCGAAGAAACGCGCTCGTAACTGCTTTA
AAAAGACTTGATCACACTCTATTGAACTTCTGCGTCTGTCAAGTCTTCGA
CTCCAAATTCAAGTGCATACGCTCGCCTTTCTCCGCACCATGCCAGGAGT
TGAGCCCGCCAGAAGCCGCTGCTGCCGAGGACTTGAGCACTGGCGCGAAG
AAACGCGCACGCGATGACGATGCCGACGCCGACAACGATGAAGCAGCACA
GCTCAGCAAGCGCAGCAAACTCGACGAAAACGACATGCTGGCCAAGGAAA
CGGAGGCAGCGGCAGCGGACACCGCCGCTGCTGCCGCAACCGCTGCTGCC
CCAACCGCTGCTGCCGCAACCGCTGCTGCCGCAACCGCTGCTGCCGCTGC
TGCTGACGCTGCGCCCGATGCCGCTGCCGCCGCCGCCGCCCCTGAAGCCG
AATAGCAGCGCCGCGTTGGGCTGCGTCAATACATTGCGTGGGGAGTTGAA
CTTGACGACGCATATGTCAGAATGACGCGCTGGCGCGCTGGCAGAATGCG
GATTCGACGCGAGGTTTGCAGCCGCGAGCAGCCGATATTCGCGGATGGCG
TGACCTACCGACGGAGCGCGGACCGGGCATGCAACAAGTAGGGTTAGGGT
TTGGCCCTGAGGCGGCGCTCCCCCACTGTTCCTCACGTCACTGGTGTCGC
ACTTTGATGGGGACGCCCCCAAGCGTGCGGGGTGCCTCTGCACGCAGCAG
CGGCGGCAGCAACGCTGCGCGGGTAGCACGGATATGCTTGCGCAGCCGCT
GTCCGGGCATTGAGTTCATGCGAGCGCTGCATGTGTTGATCACTGCTGCA
GCGAGCAATCCGAAGCAGTCACAGTGTCATTGAAGCCAGGATCATTCACC
AGCTTTTGCACGCGCGTTGCTGCTCATTTCACGGCGGCAGAATGTGACGG
TCGCAAAC
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Coding sequence (CDS) from alignment at Contig_288:48706..60063-

>mRNA_18800 ID=mRNA_18800|Name=jgi.p|Trimin1|354608|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1272bp|location=Sequence derived from alignment at Contig_288:48706..60063- (Tribonema minus UTEX_B_3156 )
ATGGCGGAGCTGTATGCCGTCGATCCGCCTGGTAAAATCTACTGGGACAG
GAAAACCTACGCGTCATTTGAGCAGCACGTGGCAGCGCTCAAGGGGAGCC
GCACGCTTTACATCGGCAACCTCTCGTTCTACACAACGGAGGCGCAGATA
GCGGAGCTCTTCTCTAAGGCGCAGAAAGCGGAGCTCTTTTCCAAGATAGC
GGAGCTCTTCTCCAAGACGGGGGAGCTGCTGCGCGTGATAATGGGGCTCG
ACAGGAACCGGCGCACGCCGTGCGGCTTTGCGTTTGTGGAATACCGCCAC
AGCTGCGACGCACTTGCAGCCATACGCGACATCAGCTGCGACGCGCTCGC
CGCCATACGCGACGTCAGCTGCGACGCGCTTGCAGCCATGCGCGACGTCA
GCGGAACGTGCCTCGATGAACGAATCATTCGCGCTGAGCTCGACCCGGGC
TTCCAGGACGGGCGGCAGTATGGCAGGGGGACCAGCGGCGGGCAAGTTCG
AGACGAGCGCAACAAGCAGTACGGCGGGGTTGACCTCGCACGGCAGGCGC
CGCCCATGGACTCACAACTGGGGTTTGCAGGGCTGGCCCCCCAGCTCTCG
GAGGTGGCAACCACGGCACTCACAACCGCCACAAGCACGGCGGCGGCGGC
GGCGGCGGCGGCGGCGGCGACGCAGCACACGGCCACCAACACACTTCTCC
CGCCGCACACGCCGGCGGCCGCGACCAAGTGGACGAGTTCGGACGCGCAC
TGCCCTCCAAGAGACCGCGAGATGGATGAGTTCGGGCGCGCGCTGCCCTC
CAAGAGACAGAGAGAACCCTCTGTTGAGACCGCAGCAGCAGCTGCATCCC
CACCCGCAGCAGCGGCAGCAGCAGCGGCAGCTGCGCCGGAATCTGCAGCA
GCAGTGGCAGCAGCGGCGCCGGCTGAACCTGCGCCTATGGACGCTGGCGC
CGAGGAGGTCAAGGAGTTGAGCCCGCCAGAAGCCGCTGCTGCCGAGGACT
TGAGCACTGGCGCGAAGAAACGCGCACGCGATGACGATGCCGACGCCGAC
AACGATGAAGCAGCACAGCTCAGCAAGCGCAGCAAACTCGACGAAAACGA
CATGCTGGCCAAGGAAACGGAGGCAGCGGCAGCGGACACCGCCGCTGCTG
CCGCAACCGCTGCTGCCCCAACCGCTGCTGCCGCAACCGCTGCTGCCGCA
ACCGCTGCTGCCGCTGCTGCTGACGCTGCGCCCGATGCCGCTGCCGCCGC
CGCCGCCCCTGAAGCCGAATAG
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