mRNA_18798 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354606
Unique NamemRNA_18798
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|354606 vs. uniprot
Match: A0A835YXY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXY7_9STRA)

HSP 1 Score: 1512 bits (3914), Expect = 0.000e+0
Identity = 899/899 (100.00%), Postives = 899/899 (100.00%), Query Frame = 1 
Query:    1 MGGRALRVAAALSLAPVDDDNLLVEHIWTWQYDDRAVMIKFVPGSDQVISVHKAGNVRLYDNLQSDPYYYKHLVDMTADTYDLGDHGLLAMEYHPDWDAGVRKIFVLYTGEPKDVRQLPNNDAVEDDRPTSWGKGPPGKHGQLWPDSCPCLDCDGAGKNRDGLICEHPYYIDRISVDLDAGTSKKDVTLLSVMCGSSDTHGPGDLKIIGKDLIYSTGEGSQFTVFDYGFEDDGCYNSDSDSPLFPHPPXXXXXXXXXXXXXXXXXXXXXXXXIPLSTPAXXXXXXXXXXXXWLRPRSXXXXXXXXXXXXXXXXDQTAGQGSFRAIRETFGNGKIGRIPYDLLDSDSEISLDQVELVAKGVRQPVRLFHHEKQDRLDVGFGDAGTTERIFYCXXXXXXXXXXXXXXXXDNISKKPDQLNFGWPCIEGVRTTTLGDIGVWDAPSEQLVXXXXXXXXXXXXXXXXXXEQGVXXXXXXXXXXXXXXXXQERMKWLKDNDLPHCAATATAVQAWVDKKPVPAGGDTSWEVPFFEYRVGIMDNGNPDLCYDGFGAITSVYFHDPEASGPAGALPSVYAGKLIFSDYAKSCTWYFENGEDGLPDTTKLPKTLMAQTGFVNIVQXXXXXXXXXXXXXXXXXXXXXXVGPDGAMYGVDYTNGRLLRMSAINAEKGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPADVPETDPPTPAPTPDAAGVLDANTCHGSRGDMPTLGWKPKAGGAPGALAATLTLSAVNFKTAQGNMRTFAWNGMMPGPIIRMQEPWGPQRRSLLARVCTAAPNRSRRLRSAAGERRPCGVYHLTVKNDLKDWVLPGKKGNTGGTINTMHDPTTTNIHLHGLHISGEAPGDDTFTVIEAGDENEYIYTIPCDHSGGTNW 2697
            MGGRALRVAAALSLAPVDDDNLLVEHIWTWQYDDRAVMIKFVPGSDQVISVHKAGNVRLYDNLQSDPYYYKHLVDMTADTYDLGDHGLLAMEYHPDWDAGVRKIFVLYTGEPKDVRQLPNNDAVEDDRPTSWGKGPPGKHGQLWPDSCPCLDCDGAGKNRDGLICEHPYYIDRISVDLDAGTSKKDVTLLSVMCGSSDTHGPGDLKIIGKDLIYSTGEGSQFTVFDYGFEDDGCYNSDSDSPLFPHPPXXXXXXXXXXXXXXXXXXXXXXXXIPLSTPAXXXXXXXXXXXXWLRPRSXXXXXXXXXXXXXXXXDQTAGQGSFRAIRETFGNGKIGRIPYDLLDSDSEISLDQVELVAKGVRQPVRLFHHEKQDRLDVGFGDAGTTERIFYCXXXXXXXXXXXXXXXXDNISKKPDQLNFGWPCIEGVRTTTLGDIGVWDAPSEQLVXXXXXXXXXXXXXXXXXXEQGVXXXXXXXXXXXXXXXXQERMKWLKDNDLPHCAATATAVQAWVDKKPVPAGGDTSWEVPFFEYRVGIMDNGNPDLCYDGFGAITSVYFHDPEASGPAGALPSVYAGKLIFSDYAKSCTWYFENGEDGLPDTTKLPKTLMAQTGFVNIVQXXXXXXXXXXXXXXXXXXXXXXVGPDGAMYGVDYTNGRLLRMSAINAEKGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPADVPETDPPTPAPTPDAAGVLDANTCHGSRGDMPTLGWKPKAGGAPGALAATLTLSAVNFKTAQGNMRTFAWNGMMPGPIIRMQEPWGPQRRSLLARVCTAAPNRSRRLRSAAGERRPCGVYHLTVKNDLKDWVLPGKKGNTGGTINTMHDPTTTNIHLHGLHISGEAPGDDTFTVIEAGDENEYIYTIPCDHSGGTNW
Sbjct:    1 MGGRALRVAAALSLAPVDDDNLLVEHIWTWQYDDRAVMIKFVPGSDQVISVHKAGNVRLYDNLQSDPYYYKHLVDMTADTYDLGDHGLLAMEYHPDWDAGVRKIFVLYTGEPKDVRQLPNNDAVEDDRPTSWGKGPPGKHGQLWPDSCPCLDCDGAGKNRDGLICEHPYYIDRISVDLDAGTSKKDVTLLSVMCGSSDTHGPGDLKIIGKDLIYSTGEGSQFTVFDYGFEDDGCYNSDSDSPLFPHPPXXXXXXXXXXXXXXXXXXXXXXXXIPLSTPAXXXXXXXXXXXXWLRPRSXXXXXXXXXXXXXXXXDQTAGQGSFRAIRETFGNGKIGRIPYDLLDSDSEISLDQVELVAKGVRQPVRLFHHEKQDRLDVGFGDAGTTERIFYCXXXXXXXXXXXXXXXXDNISKKPDQLNFGWPCIEGVRTTTLGDIGVWDAPSEQLVXXXXXXXXXXXXXXXXXXEQGVXXXXXXXXXXXXXXXXQERMKWLKDNDLPHCAATATAVQAWVDKKPVPAGGDTSWEVPFFEYRVGIMDNGNPDLCYDGFGAITSVYFHDPEASGPAGALPSVYAGKLIFSDYAKSCTWYFENGEDGLPDTTKLPKTLMAQTGFVNIVQXXXXXXXXXXXXXXXXXXXXXXVGPDGAMYGVDYTNGRLLRMSAINAEKGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPADVPETDPPTPAPTPDAAGVLDANTCHGSRGDMPTLGWKPKAGGAPGALAATLTLSAVNFKTAQGNMRTFAWNGMMPGPIIRMQEPWGPQRRSLLARVCTAAPNRSRRLRSAAGERRPCGVYHLTVKNDLKDWVLPGKKGNTGGTINTMHDPTTTNIHLHGLHISGEAPGDDTFTVIEAGDENEYIYTIPCDHSGGTNW 899
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BLAST of jgi.p|Trimin1|354606 vs. uniprot
Match: A0A835YZK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZK9_9STRA)

HSP 1 Score: 584 bits (1506), Expect = 3.190e-196
Identity = 319/681 (46.84%), Postives = 379/681 (55.65%), Query Frame = 1 
Query:   49 VDDDNLLVEHIWTWQYDDRAVMIKFVPGSDQVISVHKAGNVRLYDNLQSDPYYYKHLVDMTADTY--------DLGDHGLLAMEYHPDWDAGVRKIFVLYTGEPKDVRQLPNNDAVEDDRPTSWGKGPPGKHGQLWPDSCPCLDCDGAGKNRDGLICEHPYYIDRISVDLDAGTSKKDVTLLSVMCGSSDTHGPGDLKIIGKDLIYSTGEGSQFTVFDYGFEDDGCYNSDSDSPLFPHPPXXXXXXXXXXXXXXXXXXXXXXXXIPLSTPAXXXXXXXXXXXXWLRPRSXXXXXXXXXXXXXXXXDQTAGQGSFRAIRETFGNGKIGRIPYDLLDSDSEISLDQVELVAKGVRQPVRLFHHEKQDRL---DVGFGDAGTT--ERIFYCXXXXXXXXXXXXXXXX--------------DNISKKPDQ----LNFGWPCIEGVRTTTLGDIGVWDAPSEQLVXXXXXXXXXXXXXXXXXXEQGVXXXXXXXXXXXXXXXXQERMKWLKDNDLPHCAATATAVQAWVDKKPVPAGGDTSWEVPFFEYRVGIMDNGNPDLCYDGFGAITSVYFHDPEASGPAGALPSVYAGKLIFSDYAKSCTWYFENGEDGLPDTTKLPKTLMAQTGFVNIVQXXXXXXXXXXXXXXXXXXXXXXVGPDGAMYGVDYTNGRLLRMSAINAEKG 1998
            +DDDN+LVE +WTW  DD   MIKFVPGS+QV+  HK G +RLYD++ S    Y  LVDMTA+           + DHGL + E+HPDWDAGVRK+F+LY+GEPKD+R+LPN  A+  DRP  +G GPPG HGQ W D CPCLDCDG G N DGL+CE PYY+DR S+DLDAGT+ +DVTLL+  CGSS THGP DLK+IGKDLIY  G+ SQ    DYG + D C++                                                                             +Q+AGQGS+R +RETFG GKIGRIP+DLLDSD E++ +QVELVAKG+RQP R+FHH+ QDRL   DV  GD   T  ERIF               XXX              D I++ P       NFGWPCIEGVRT TLG +G W + +EQ                     Q                     + WL +N L HC AT  A QA++D +P PA GD  W+ P FEYR GI D  +P+ C+  F AITSVYFHDP A+G AGALPS  AG+LIFSDYAK+C WYFENG DGLPDTT LPK LM  TG +NI Q                       GPDGAMYG+DY NGRLLRMS I AE G
Sbjct:   38 LDDDNVLVELLWTWDEDDLPTMIKFVPGSEQVLVAHKLGTLRLYDSIDSGVNAYTLLVDMTAELXXXXXXEVNSIHDHGLTSFEFHPDWDAGVRKVFLLYSGEPKDIRKLPNYAAILADRPPDYGTGPPGDHGQTWGDECPCLDCDGTGANLDGLVCEKPYYLDRFSIDLDAGTATRDVTLLTASCGSSTTHGPTDLKVIGKDLIYGAGDSSQVATLDYGLDVDACFDP----------------------------------------------------------------------------NQSAGQGSYRCVRETFGAGKIGRIPHDLLDSDKELAFEQVELVAKGLRQPWRMFHHKAQDRLYIGDVRNGDPEGTKSERIFTLSSACHDHTVSSCDXXXXXXXXXXXXXXXHVDGIARAPQAGAALPNFGWPCIEGVRTETLGPLGAWTSATEQ---EQSMPSAAVDPVASSRRIQRSGHLTVASERWLGLLYQNGFLDWLDENGLDHCDATVAAAQAFIDGEPAPADGDPGWQAPIFEYRTGIEDPDDPETCFSTFAAITSVYFHDPAAAGAAGALPSKLAGRLIFSDYAKACVWYFENGADGLPDTTVLPKILMVDTGLINITQ-----------------------GPDGAMYGLDYVNGRLLRMSVIEAEAG 616
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BLAST of jgi.p|Trimin1|354606 vs. uniprot
Match: A0A835YVH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH6_9STRA)

HSP 1 Score: 535 bits (1378), Expect = 4.860e-168
Identity = 331/913 (36.25%), Postives = 432/913 (47.32%), Query Frame = 1 
Query:   46 PVDDDNLLVEHIWTWQYDDRAVMIKFVPGSD-QVISVHKAGNVRLYDNLQSDPYYYKHLVDMTADTYDLGDHGLLAMEYHPDWDAGVRKIFVLYTGEPKDVRQLPNNDAVEDDRPTSWGKGPPGKHGQLWPDSCPCLDCDGAGKNRDGLICEHPYYIDRISVDLDAGTSKKDVTLLSVMCGSSDTHGPGDLKIIGKDLIYSTGEGSQFTVFDYGFEDDGCYNSDSDSPLFPHPPXXXXXXXXXXXXXXXXXXXXXXXXIPLSTPAXXXXXXXXXXXXWLRPRSXXXXXXXXXXXXXXXXDQTAGQGSFRAIRET--FGNGKIGRIPYDLLDSDSEISLDQVELVAKGVRQPVRLFHHEKQDRL---DVGFGDAGTTERIFYCXXXXXXXXXXXXXXXXDNISKKPDQL-------NFGWPCIEGVRTTT----LGDIGVWDAPSEQLVXXXXXXXXXXXXXXXXXXEQGVXXXXXXXXXXXXXXXXQERMKWLKDNDLPHCAATATAVQAWV-DKKPVPAGGDTSWEVPFFEYRVGIMDNGNPDLCYDGFGAITSVYFHDPEASGPAGALPSVYAGKLIFSDYAKSCTWYFENGE-DGLPDTTKLPKTLMAQTGFVNIVQXXXXXXXXXXXXXXXXXXXXXXVGPDGAMYGVDYTNGRLLRMSAINAEKGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPADVPETDPPTP----------APTPDAAGVLDANTCHGSRGDMPTLGWKPKAGGAPGALAATLTLSAVNFKTAQGNMRTFAWNGMMPGPIIRMQEPWGPQRRSLLARVCTAAPNRSRRLRSAAGERRPCGVYHLTVKNDLKDWVLPGKKGNTGGTINTMHDPTTTNIHLHGLHISGEAPGDDTFTVIEAGDENEYIYTIPCDHSGGTNW 2697
            P  +++L++EH+W +  DD  V + FVPG+D  V++ HK G +RLY N+ +D   YK L+DM AD +  GDHGLL+  +HPD++ GV+K F+ YTGEPKDV  LPN+ A+  +RP  WG GPP   G  W D CPCLDCDG G N  G ICEHPYYIDR++VDLDAGT  K+VTLL+ +CGS+ +HGPG L  I  DL+ S G+GSQF  FD GF +DGCY                                     +P                                       D  A QG FRA R    + NGKI R+P  LLDS + I+L+QVE +++G RQP R+F+HE  D+L   DVG GD GTTERIF                   ++SK P          N+GWPCIEGV ++     L +  +WD PSEQ                                         ER+ +L+ N L  C     A  A V    P+PA  D +W  PF+EYRVG +D   PDLC  G  A+T+V+ +D        ++P  Y GKL+FSDY K C W F+     G PDT++ P  + A  G +++V                          D A+YG+D+TN +++RM A                                      GPA    T PPT              PDAA   DA T        P LGW+ +A    G+    LTL  VN  TA G MRT AWNGM+PGP++RM+                                 PCGVYH+ V ND  ++    +       +NTM  PT TN+H+HGLH+SGE+PGDD+F  IE G   +Y   +PCDHS G+NW
Sbjct:   33 PSQNEDLVIEHLWQFSMDDPPVKLAFVPGTDGMVVTAHKTGFMRLYQNVDADVNDYKTLIDMRADVFSFGDHGLLSFAFHPDFEKGVKKAFLHYTGEPKDVSVLPNDAAITPNRPQGWGLGPPETTGYTWGDICPCLDCDGTGPNHYGNICEHPYYIDRVAVDLDAGTFTKEVTLLNDVCGSASSHGPGTLIFINGDLVASNGDGSQFAEFDPGFPEDGCY-------------------------------------VP---------------------------------------DAGADQGCFRAQRMDLPYANGKIMRVPAALLDSAATITLEQVEFISRGNRQPFRMFYHEPADQLWIADVGLGDGGTTERIF----------------TIPDVSKAPGAALNTNPAHNWGWPCIEGVYSSAQQGLLHEYNLWDTPSEQ-----------------------------------------ERLAYLQQNGLATCDGIKAAALALVAGTTPLPADADETWMPPFYEYRVGALDPNFPDLCVSGVAALTNVFVYD------GASMPEAYTGKLLFSDYVKQCIWMFDQDPATGQPDTSRPPHIVTANLGLIDMVASPV----------------------DDAIYGIDFTNTQIVRMYARG-----------------------------------KGPAGQGPTPPPTAXXXXXXXXXXTDIPDAAMCFDAAT-------PPELGWRRRA---DGSYEGDLTLGVVNVATAAGTMRTRAWNGMIPGPLMRME---------------------------------PCGVYHINVFNDQAEFPDTARDY----ALNTMGAPTHTNLHVHGLHVSGESPGDDSFVTIEPGATQQYTIAVPCDHSSGSNW 702
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BLAST of jgi.p|Trimin1|354606 vs. uniprot
Match: A0A836CK08_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK08_9STRA)

HSP 1 Score: 502 bits (1293), Expect = 1.980e-157
Identity = 327/863 (37.89%), Postives = 409/863 (47.39%), Query Frame = 1 
Query:  142 VISVHKAGNVRLYDNLQSDPYYYKHLVDMTADTYDLGDHGLLAMEYHPDWDAGVRKIFVLYTGEPKDVRQLPNNDAVEDDRPTSWGKGPPGKHGQLWPDSCPCLDCDGAGKNRDGLICEHPYYIDRISVDLDAGTSKKDVTLLSVMCGSSDTHGPGDLKIIGKDLIYSTGEGSQFTVFDYGFEDDGCYNSDSDSPLFPHPPXXXXXXXXXXXXXXXXXXXXXXXXIPLSTPAXXXXXXXXXXXXWLRPRSXXXXXXXXXXXXXXXXDQTAGQGSFRAIRETFGNGKIGRIPYDLLDSDSEISLDQVELVAKGVRQPVRLFHHEKQDRL---DVGFGDAGTTERIFYCXXXXXXXXXXXXXXXXDNISKKPDQLNFGWPCIEGVRTTTL----GDIGVWDAPSEQLVXXXXXXXXXXXXXXXXXXEQGVXXXXXXXXXXXXXXXXQERMKWLKDNDLPHCAATATAVQAWVDKKPVPAGGDTSWEVPFFEYRVGIMDNGNPDLCYDGFGAITSVYFHDPEASGPAGA--LPSVYAGKLIFSDYAKSCTWYFE-NGEDGLPDTTKLPKTLMAQTGFVNIVQXXXXXXXXXXXXXXXXXXXXXXVGPDGA-MYGVDYTNGRLLRMSAINAEKGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPADVPETDPPTPAPTPDAAGVLDANTCHGSRGDMPTLGWKPKAGGAPGALAATLTLSAVNFKTAQGNMRTFAWNGMMPGPIIRMQEPWGPQRRSLLARVCTAAPNRSRRLRSAAGERRPCGVYHLTVKNDLKDWVLPGKKGNTGGTINTMHDPTTTNIHLHGLHISGEAPGDDTFTVIEAGDENEYIYTIPCDHSGGTNW 2697
            V++ HK+G VRL+ ++ +D      ++DMT D  D  DHGLL+  +HP +  GV+K F+LYTGEPKDV  LPNN  +  +RP  WG GPPGK G  W D C CLDCDG G N  G ICEHPYY+DR++VDL+AGT  K+VTLL V CGSS +HGPG +  IG DL+ S G+GSQ+   D GF+ DGCY                                          P                                        QG FRA RE FGNGK+ RIP  LL++ + I+L+    VA G+RQP R+F+H   D L   D GFGD GTTERI+                            N+GWPCIEGV   T     G   +WD PSEQ                                         ER+++L+D  L  C     A QA  D    P   D  W  P +EYRVG +D  +PD C  G  AITSV+      +  + +  LP+ Y GKLIF+D+ K CTW+F+ +   G PDT+  P  + A  G V+IV                        GP G   YG+D+ N RL+RM+++ A             XXXXXXXXXXXXXX              +T  PT  P P  A    A TC   R + P L W        G+   TLTL  V  +T +G +RT AWNGM+PGP++RMQ                                 PCG YHLTVKN LK W  P  +      +N++HDP  TN+H+HGLH+SGEAPGDD F VIE GD   Y YTIPCDH+ GTNW
Sbjct:    2 VVTSHKSGMVRLHSSITADFADSTVMLDMTEDVADYNDHGLLSFHFHPQFANGVQKAFLLYTGEPKDVNVLPNNAEITPNRPDGWGAGPPGKMGFTWNDQCRCLDCDGIGPNHYGNICEHPYYLDRVAVDLEAGTMTKEVTLLQVACGSSSSHGPGTVLSIGGDLLVSVGDGSQYAELDPGFDVDGCY-----------------------------------------VPGAGDD-----------------------------------QGVFRAQREDFGNGKVHRIPAALLNAPAAIALEATSPVAIGLRQPFRMFYHAPGDTLWIGDTGFGDGGTTERIYGLNDASAPVLSTAVP-------------NYGWPCIEGVFANTADALAGKYTLWDTPSEQ-----------------------------------------ERLRYLEDRGLTRCDGIKLAAQALADGTAPPDDADLMWRPPTYEYRVGALDPNHPDDCGGGLAAITSVFISATNGANNSSSSGLPADYTGKLIFADHVKQCTWFFDADPATGAPDTSVPPHVITANLGLVDIV-----------------------AGPGGTGAYGIDFANARLVRMASLTAAAAPRDAIAAPIGXXXXXXXXXXXXXXAA------------KTVKPTKTPKPIPA----AKTCRNPR-NFPELQWTRND---DGSYEGTLTLDVVMLETERGAVRTRAWNGMIPGPLMRMQ---------------------------------PCGTYHLTVKNALKGWPAPPPRIAAAAQLNSVHDPLVTNVHVHGLHVSGEAPGDDVFGVIEPGDAAMYTYTIPCDHASGTNW 658
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BLAST of jgi.p|Trimin1|354606 vs. uniprot
Match: A0A835Z7F4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F4_9STRA)

HSP 1 Score: 345 bits (886), Expect = 4.870e-106
Identity = 236/515 (45.83%), Postives = 276/515 (53.59%), Query Frame = 1 
Query:  523 SVDLDAGTSKKDVTLLSVMCGSSDTHGPGDLKIIGKDLIYSTGEGSQFTVFDYGFEDDGCYNSDSDSPLFPHPPXXXXXXXXXXXXXXXXXXXXXXXXIPLSTPAXXXXXXXXXXXXWLRPRSXXXXXXXXXXXXXXXXDQTAGQGSFRAIRETFGNGKIGRIPYDLLDSDSEISLDQVELVAKGVRQPVRLFHHEKQDRL---DVGFGDA-GTT-ERIFYCXXXXXXXXXXXXXXXXDNISKKPDQL------------------NFGWPCIEGVRTTTLGDIGVWDAPSEQLVXXXXXXXXXXXXXXXXXXEQGVXXXXXXXXXXXXXXXXQERMKWLKDNDLPHCAATATAVQAWVDKKPVPAGGDTSWEVPFFEYRVGIMDNGNPDLCYDGFGAITSVYFHDPEASGPAGALPSVYAGKLIFSDYAKSCTWYFENGEDGLPDTTKLPKTLMAQTGFVNIVQXXXXXXXXXXXXXXXXXXXXXXVGPDGAMYGVDYTNGRLLRMSAINAEKG 1998
            S  LDAGT+ K+VTLL+V CGSSD+HGP DLK+IGK L+Y   + SQ +                     PH                          + L                   P+                  Q+AGQGS+R+IRETFG GKIGRIP+DLLDS  EI+  QVEL+AKG+RQP R+FHHE QDRL   DVG GDA GTT ERIF+            XXXXX                            NFGWPCIEGVRT TLG +G W + +++  XXXXXXXXXXXXXXXXX                        + WL +N L +C AT  A QA++D  PVPAGGD  W+ P FEYR GI D  +P  C++ F AITSVYFHDP A+G AGALPS  AGKLIFSDYAK+C WY ENG DGLPDTT LPK LMA+TGF+NI Q                       GP+GAMYG+DY NGRLLR+S I AE G
Sbjct:   27 SAHLDAGTATKEVTLLTVSCGSSDSHGPADLKVIGKGLVYGVADSSQ-SASGIRXXXXXXXXXXXXXXXXPH-------------AAAAPVSQQRALFVTLGHSVTTLDSGFGDNDACYDPK------------------QSAGQGSYRSIRETFGAGKIGRIPHDLLDSAKEITFGQVELMAKGLRQPWRMFHHEAQDRLYIGDVGNGDAEGTTSERIFHIDGVARAPRPHRXXXXXXXXXXXXXXXXXXXXXXXXXQDAAGVLPNFGWPCIEGVRTATLGPLGAWTSATDRXXXXXXXXXXXXXXXXXXX----------------------RYLDWLDENGLTYCDATVAAAQAFIDGAPVPAGGDLGWQAPLFEYRTGIEDPDDPKTCFNTFAAITSVYFHDPAAAGAAGALPSKLAGKLIFSDYAKACVWYVENGADGLPDTTALPKILMAETGFINITQ-----------------------GPEGAMYGLDYVNGRLLRISIIEAEAG 464
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BLAST of jgi.p|Trimin1|354606 vs. uniprot
Match: A0A835ZE02_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE02_9STRA)

HSP 1 Score: 286 bits (731), Expect = 3.270e-86
Identity = 142/352 (40.34%), Postives = 196/352 (55.68%), Query Frame = 1 
Query:   40 LAPVDDDNLLVEHIWTWQYDDRAVMIKFVPGSDQVISVHKAGNVRLYDNLQSDPYYYKHLVDMTADTYDLGDHGLLAMEYHPDWDAGVRKIFVLYTGEPKDVRQLPNNDAVEDDRPTSWGKGPPGKHGQLWPDSCPCLDCDGAGKNRDGLICEHPYYIDRISVDLDAGTSKKDVTLLSVMCGSSDTHGPGDLKIIGKDLIYSTGEGSQFTVFDYGFEDDGCYNSDSDSPLFPHPPXXXXXXXXXXXXXXXXXXXXXXXXIPLSTPAXXXXXXXXXXXXWLRPRSXXXXXXXXXXXXXXXXDQTAGQGSFRAIRETFGNGKIGRIPYDLLDSDSEISLDQVELVAKGVRQPVR 1095
            L P DD  L +E +WT++Y+D+  M++FVPGSD VI+V K G +R Y+++ +D   +  ++DM+AD +   DHG+ ++E+HPDWD GV   FVLYTGEPK V+ LPN  A++  RP  WG       G  W D CPCLDC+G G+N +GL+CEHPYYIDRI++D+  G + KD+TLL   CG+S +HGPG L  +G D+++  G+GSQFT+ D G  +DGC++                                                                             D+  GQGS RAIR+ F NGKI R+PY+L+DS  E+  DQV ++AKGVRQP R
Sbjct:    2 LQPNDDPELKLEQLWTFEYNDKPTMLRFVPGSDAVITVGKTGVLRWYNSIDADKDKFTVMLDMSADVHSNADHGVQSLEFHPDWDLGVHTAFVLYTGEPKSVKTLPNEAAIKSMRPDGWGDD---NGGYKWWDQCPCLDCEGTGQNENGLLCEHPYYIDRINIDVKKGKATKDITLLQAACGASSSHGPGHLLRVGDDILFGVGDGSQFTIIDTGLPEDGCFDP----------------------------------------------------------------------------DKGKGQGSLRAIRDDFNNGKIRRLPYNLMDSPEELEGDQVPVIAKGVRQPFR 274
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BLAST of jgi.p|Trimin1|354606 vs. uniprot
Match: A0A835ZAX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX7_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.570e-85
Identity = 196/548 (35.77%), Postives = 246/548 (44.89%), Query Frame = 1 
Query: 1096 LFHHEKQDRL---DVGFGDAGTTERIFYCXXXXXXXXXXXXXXXXDNISKKP--DQLNFGWPCIEGVRTTTLGDIGVWDAPSEQLVXXXXXXXXXXXXXXXXXXEQGVXXXXXXXXXXXXXXXXQERMKWLKDNDLPHCAATATAVQAWVDKKPVPAGGDTSWEVPFFEYRVGIMDNGNPDLCYDGFGAITSVYFHDPEASGPAGALPSVYAGKLIFSDYAKSCTWYFENGEDGLPDTTKLPKTLMAQTGFVNIVQXXXXXXXXXXXXXXXXXXXXXXVGPDGAMYGVDYTNGRLLRMSAINAEKGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPADVPETDPPTPAPTPDAAGV---------LDANTCHGSRGDMPTLGWKPKAGGAPGALAATLTLSAVNFKTAQGNMRTFAWNGMMPGPIIRMQEPWGPQRRSLLARVCTAAPNRSRRLRSAAGERRPCGVYHLTVKNDLKDWVLPGKKGNTGGTINTMHDPTTTNIHLHGLHISGEAPGDDTFTVIEAGDENEYIYTIPCDHSGGTNW 2697
            +F+H+KQD L   DVGFGD GT+ERIF                    + K P     NFGWPC+EGVR   LG   ++D P E+                                         +  KW +   + +C +T  A  A+V+++      D  W+ P FEYRVG+MD    D+C   F A+TSV+F+          +P+ YA KL+FSDYAK C WYFEN +DG PDTTKLPKTL+  TGFV++                         GPDGA+YG D+ NGR++RMS I     GG                                     T  PT  PT               +DA     + G MP   W        G    TLTL AV   T++G MR FA+NGM+PGPI+RM+                           A+G    CG Y L V NDL  W  P      GG INT+HDPT TN+HLHGLH+SG APGDD   +IE G  N+Y YT+PCDHS GTNW
Sbjct:    1 MFYHDKQDVLYIGDVGFGDTGTSERIF-------------------TMEKAPALPVSNFGWPCVEGVREYILGGFKIYDGPFER-----------------------------------------DLQKWYEAEGVDYCDSTMLAASAYVEQREASEDADPDWKAPVFEYRVGVMDKDYEDVCVSEFAALTSVHFYK------GANMPAQYADKLMFSDYAKQCVWYFEN-KDGKPDTTKLPKTLLVGTGFVHL-----------------------ETGPDGALYGTDFVNGRIIRMSKI-----GGALA----------------------------------TPAPTATPTKPTKXXXXXXXXPIPVDAAVTCFNPGAMPEFEWHQNG---DGTYEGTLTLGAVELHTSKGFMRMFAYNGMLPGPIMRMK---------------------------ASGT---CGKYTLNVINDLARWPAP-----EGGMINTLHDPTVTNLHLHGLHVSGMAPGDDVSIMIEPGQTNKYTYTLPCDHSSGTNW 381
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BLAST of jgi.p|Trimin1|354606 vs. uniprot
Match: A0A835ZCB5_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB5_9STRA)

HSP 1 Score: 294 bits (753), Expect = 2.600e-81
Identity = 228/724 (31.49%), Postives = 298/724 (41.16%), Query Frame = 1 
Query:  553 KDVTLLSVMCGSSDTHGPGDLKIIGKDLIYSTGEGSQFTVFDYGFEDDGCYNSDSDSPLFPHPPXXXXXXXXXXXXXXXXXXXXXXXXIPLSTPAXXXXXXXXXXXXWLRPRSXXXXXXXXXXXXXXXXDQTAGQGSFRAIRETFGNGKIGRIPYDLLDSDSEISLDQVELVAKGVRQPVRLFHHEKQDRL---DVGFGDAGTTERIFYCXXXXXXXXXXXXXXXXDNISKKPDQLNFGWPCIEGVRTTTLGDIGVWDAPSEQLVXXXXXXXXXXXXXXXXXXEQGVXXXXXXXXXXXXXXXXQERMKWLKDNDLPHCAATATAVQAWVDKKPVPAGGDTSWEVPFFEYRVGIMDNGNPDLC-YDGFGAITSVYFHDPEASGPAGALPSVYAGKLIFSDYAKSCTWYFENGEDGLPDTTKLPKTLMAQTGFVNIVQXXXXXXXXXXXXXXXXXXXXXXVGPDGAMYGVDYTNGRLLRMSAINAEKGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPADVPETDPPTPAPTPDA----AGVLDANTCHGSRGDMPTLGWKPKAGGAPGALAATLTLSAVNFKTAQGN-MRTFAWNGMMPGPIIRMQEPWGPQRRSLLARVCTAAPNRSRRLRSAAGERRPCGVYHLTVKNDLKDWVLPGKKGNTGGTINTMHDPTTTNIHLHGLHISGEAPGDDTFTVIEAGDENEYIYTIPCDHSGGTNW 2697
            KD+TL   +CGSS THGPG L  +G ++I++ G+G+QF   D  +                                             +  P                P +                   A QG FR+ R  F +GK+  IP  LLDS   I+LDQ+ +V++G RQP R+++H ++D L   DVG GD GTTER+F+                    +  P   N+GWPCIEG+  +      ++D PSEQ                                         ER  +L    L  CA   TAV A+     +PAG D  W+ P +EYR GI+D   PD C  D   AITSV+  D      A ++P+V  GK++F+D  K C WYF+   DG  D TK P  L+A +  V++ +                       GPDGA+Y  DY N R+ R+       G G+                                 VP+    TPAPT DA    A + +A  C    G  P LGW  +A    G   A LTL  V   TA G  +RT AWNG++PGPIIRM+                                  C VY+LTV+NDL  W  P  K  TG  +N  H PT TNIH HGLHISGE+P D+ F  I  G E  Y Y IPCDH GG +W
Sbjct:    3 KDLTLYVGVCGSSSTHGPGTLINVGANMIFAMGDGAQFAAVDEKY---------------------------------------------IPAPLNVIDPGFPQTDGCFVPGAG------------------ADQGEFRSQRMDFPHGKVLMIPGKLLDSKVPITLDQLVVVSRGNRQPFRMYYHAQKDALWICDVGQGDGGTTERLFWAPDMNKRVAAAAAAGTP---ATAPAPYNWGWPCIEGIYPSAQ-QYALYDCPSEQ-----------------------------------------ERANYLNGLGLQTCAPVYTAVDAYTRGVAMPAGADVMWQPPQYEYRTGILDPQYPDYCGNDDNAAITSVHISD------ALSMPAVLRGKVMFADRVKGCVWYFDADADGHMDRTKPPHVLIANSVIVHMEE-----------------------GPDGALYMADYENMRITRVYLDGTGPGTGQVA-------------------------------VPDA---TPAPTTDAYVPPANIPEAGGCFPGTG-FPELGWTHQA---DGTFTADLTLGVVTLTTADGGTLRTRAWNGLIPGPIIRMKA---------------------------------CQVYYLTVRNDLGAW--PEGKPETG-VMNGFHGPTVTNIHTHGLHISGESPADNPFVSILPGQEYTYQYRIPCDHIGGLHW 515
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BLAST of jgi.p|Trimin1|354606 vs. uniprot
Match: A0A835ZH56_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH56_9STRA)

HSP 1 Score: 244 bits (622), Expect = 4.050e-64
Identity = 191/543 (35.17%), Postives = 239/543 (44.01%), Query Frame = 1 
Query: 1099 FHHEK-QDRL---DVGFGDAGTTERIFYCXXXXXXXXXXXXXXXXDNISKKPDQLNFGWPCIEGVRTTT----LGDIGVWDAPSEQLVXXXXXXXXXXXXXXXXXXEQGVXXXXXXXXXXXXXXXXQERMKWLKDNDLPHCAATATAVQAWVDKKPVPAGGDTSWEVPFFEYRVGIMDNGNPDLCYDGFGAITSVYFHDPEASGPAGALPSVYAGKLIFSDYAKSCTWYFENGEDGL-PDTT-KLPKTLMAQTGFVNIVQXXXXXXXXXXXXXXXXXXXXXXVGPDGAMYGVDYTNGRLLRMSAINAEKGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPADVPETDPPTPAPTPDAAGVLDANTCHGSRGDMPTLGWKPKAGGAPGALAATLTLSAVNFKTAQGNMRTFAWNGMMPGPIIRMQEPWGPQRRSLLARVCTAAPNRSRRLRSAAGERRPCGVYHLTVKNDLKDWVLPGKKGNTGGTINTMHDPTTTNIHLHGLHISGEAPGDDTFTVIEAGDENEYIYTIPCDHSGGTNW 2697
             H++K QD+L   DVGFGD GTTER+F                   ++       N+GWPCIEG+ +T      G+    D  SEQ                                         +R  +++ N+L  C     AVQ +V         D +W  P FEYRVG++D   P LC     AITSV+ ++         +P+ Y GKLI +DYAK C WYF+N      PD     P  L+A TG V+  +                       GPDGA+Y VD  N R+LRM A    KG G           XXXXXXXXXXXX                       PD   V+ A+ C   + +MP   W  +A    G+ A  L   AV   TA G MRT  +NG+ PGPI+RMQ                                  CGVYHLT+KN L+ W  P   G   G +N  HDPT TNIHLHG+HISG APGDD F  I AG+E EY+YT+PCDH+GGTNW
Sbjct:    1 MHYQKSQDKLYITDVGFGDGGTTERLFVATDVSK------------HVPGVTQPFNWGWPCIEGLFSTVDDEVAGNFNPLDTDSEQ-----------------------------------------QRQAYVRTNNLDVCDGVYNAVQDYVAGDAPGPLSDATWRAPVFEYRVGLLDPDYPGLCTYSNAAITSVHVYE------GADMPAAYTGKLIIADYAKQCVWYFDNKPGTKEPDAPGSYPHVLLAGTGCVDTAE-----------------------GPDGALYCVDLLNNRILRMYA----KGEGPSKGLDGPTEPXXXXXXXXXXXX-----------------------PD--NVVVADQCFDPK-NMPEFQWARQA---DGSYAGVLEFGAVEIATATGTMRTVGYNGLQPGPIMRMQA---------------------------------CGVYHLTLKNTLEGW--PEGIGPEAG-VNGEHDPTVTNIHLHGMHISGMAPGDDVFAAIAAGEEQEYVYTVPCDHTGGTNW 392
[Close]
BLAST of jgi.p|Trimin1|354606 vs. uniprot
Match: A0A835Z8B6_9STRA (Plastocyanin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B6_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.300e-55
Identity = 98/166 (59.04%), Postives = 114/166 (68.67%), Query Frame = 1 
Query: 2197 MPTLGWKPKAGGAPGALAATLTLSAVNFKTAQGNMRTFAWNGMMPGPIIRMQEPWGPQRRSLLARVCTAAPNRSRRLRSAAGERRPCGVYHLTVKNDLKDWVLPGKKGNTGGTINTMHDPTTTNIHLHGLHISGEAPGDDTFTVIEAGDENEYIYTIPCDHSGGTN 2694
            MP L W PKAGGAPG +AATL LSAV  KT++G MRTFAWNGM+PGP+IRM+                                 PCGVYHLT+KN L+DW +  +    G  +NT+HDP+TTN+HLHGLHISGEAPGDDTFTV+EAG ENE+IYTIPCDHSGGTN
Sbjct:    1 MPVLSWVPKAGGAPGVMAATLELSAVKLKTSRGTMRTFAWNGMIPGPLIRMK---------------------------------PCGVYHLTIKNGLEDWAVSDQNSAAGAPLNTLHDPSTTNVHLHGLHISGEAPGDDTFTVVEAGGENEFIYTIPCDHSGGTN 133
[Close]
BLAST of jgi.p|Trimin1|354606 vs. uniprot
Match: A0A835Z0R7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0R7_9STRA)

HSP 1 Score: 1004 bits (2595), Expect = 0.000e+0
Identity = 614/614 (100.00%), Postives = 614/614 (100.00%), Query Frame = 1 
Query:    1 MRVVRVLIVAHLYQVASERGARRYGLALATTMATAAVRLAAGDXXXXXXXXXXXXXALLPGRAPPALALDKQRLQVAVCLAKRQDFTDLPAYAHATALVHEVDAAEERWLRGERTGLPAVQGVPMAAELSASSAACAQQAAARFSGKLRYVVGSGTRAAALTVPYINKDWHVRAAARAASGYQENARSMMSIISRMTCLSIDDGRGGSGGSAPVVSCTEDEISGLVASSTRDGDVMERRHEATVNGVTTAAVTSTQLTVAAVSTAERPPAVNGAAAHPPPQQSVQSQSQVAGYISITSDMMRAQDRARRETDARLLELREKHKQQWLAANEEAGQLLRQTTHFKMAEDLHREQQRFELLRAEEKRAHRDALEARQRQKEEREREEAALDAQLQRDLAALNRWGRAGPLLACAVAATALLTRGSVWSLVADALSRYFRQCDNPAPPASYSYAHYYPSFSPWDLLSWAVPASAARTYCQLSLALRAAAAAAPLALLQRALPALAGSAAMPLAAALCTSYAVTGRWLPVAVIARALWLPAPAAIXXXXXXXXXXXXXXXXRGWGSACVRVGVXXXXXXXXXXXXXXXXXXXXXXSGECAARVLQALRQHASAVLARM 1842
            MRVVRVLIVAHLYQVASERGARRYGLALATTMATAAVRLAAGDXXXXXXXXXXXXXALLPGRAPPALALDKQRLQVAVCLAKRQDFTDLPAYAHATALVHEVDAAEERWLRGERTGLPAVQGVPMAAELSASSAACAQQAAARFSGKLRYVVGSGTRAAALTVPYINKDWHVRAAARAASGYQENARSMMSIISRMTCLSIDDGRGGSGGSAPVVSCTEDEISGLVASSTRDGDVMERRHEATVNGVTTAAVTSTQLTVAAVSTAERPPAVNGAAAHPPPQQSVQSQSQVAGYISITSDMMRAQDRARRETDARLLELREKHKQQWLAANEEAGQLLRQTTHFKMAEDLHREQQRFELLRAEEKRAHRDALEARQRQKEEREREEAALDAQLQRDLAALNRWGRAGPLLACAVAATALLTRGSVWSLVADALSRYFRQCDNPAPPASYSYAHYYPSFSPWDLLSWAVPASAARTYCQLSLALRAAAAAAPLALLQRALPALAGSAAMPLAAALCTSYAVTGRWLPVAVIARALWLPAPAAIXXXXXXXXXXXXXXXXRGWGSACVRVGVXXXXXXXXXXXXXXXXXXXXXXSGECAARVLQALRQHASAVLARM
Sbjct:    1 MRVVRVLIVAHLYQVASERGARRYGLALATTMATAAVRLAAGDXXXXXXXXXXXXXALLPGRAPPALALDKQRLQVAVCLAKRQDFTDLPAYAHATALVHEVDAAEERWLRGERTGLPAVQGVPMAAELSASSAACAQQAAARFSGKLRYVVGSGTRAAALTVPYINKDWHVRAAARAASGYQENARSMMSIISRMTCLSIDDGRGGSGGSAPVVSCTEDEISGLVASSTRDGDVMERRHEATVNGVTTAAVTSTQLTVAAVSTAERPPAVNGAAAHPPPQQSVQSQSQVAGYISITSDMMRAQDRARRETDARLLELREKHKQQWLAANEEAGQLLRQTTHFKMAEDLHREQQRFELLRAEEKRAHRDALEARQRQKEEREREEAALDAQLQRDLAALNRWGRAGPLLACAVAATALLTRGSVWSLVADALSRYFRQCDNPAPPASYSYAHYYPSFSPWDLLSWAVPASAARTYCQLSLALRAAAAAAPLALLQRALPALAGSAAMPLAAALCTSYAVTGRWLPVAVIARALWLPAPAAIXXXXXXXXXXXXXXXXRGWGSACVRVGVXXXXXXXXXXXXXXXXXXXXXXSGECAARVLQALRQHASAVLARM 614
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354606 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXY7_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZK9_9STRA3.190e-19646.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVH6_9STRA4.860e-16836.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CK08_9STRA1.980e-15737.89Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z7F4_9STRA4.870e-10645.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZE02_9STRA3.270e-8640.34Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZAX7_9STRA1.570e-8535.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCB5_9STRA2.600e-8131.49CBM6 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835ZH56_9STRA4.050e-6435.17CBM6 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835Z8B6_9STRA1.300e-5559.04Plastocyanin-like domain-containing protein n=1 Ta... [more]

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BLAST of jgi.p|Trimin1|354606 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z0R7_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_288contigContig_288:20518..34369 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354606|estExt_Genemark1.C_Ctg_2880003
DescriptionMulticopper oxidase
COG categoryQ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG2132@1|root,2RBNT@2759|Eukaryota
Evalue3.46e-13
Seed ortholog2903.EOD27587
Hectar predicted targeting categoryother localisation
TranscriptId354928
TrackFilteredModels1
ProteinId354606
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354606gene_18798Tribonema minus UTEX_B_3156 geneContig_288 20518..34369 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354606Trimin1|354606|estExt_Genemark1.C_Ctg_2880003Tribonema minus UTEX_B_3156 polypeptideContig_288 20518..34369 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18798_1exon_18798_1Tribonema minus UTEX_B_3156 exonContig_288 20518..20562 +
exon_18798_2exon_18798_2Tribonema minus UTEX_B_3156 exonContig_288 20995..21162 +
exon_18798_3exon_18798_3Tribonema minus UTEX_B_3156 exonContig_288 22192..22420 +
exon_18798_4exon_18798_4Tribonema minus UTEX_B_3156 exonContig_288 24576..24662 +
exon_18798_5exon_18798_5Tribonema minus UTEX_B_3156 exonContig_288 25435..25568 +
exon_18798_6exon_18798_6Tribonema minus UTEX_B_3156 exonContig_288 26361..26441 +
exon_18798_7exon_18798_7Tribonema minus UTEX_B_3156 exonContig_288 26471..26563 +
exon_18798_8exon_18798_8Tribonema minus UTEX_B_3156 exonContig_288 26694..26747 +
exon_18798_9exon_18798_9Tribonema minus UTEX_B_3156 exonContig_288 26849..27081 +
exon_18798_10exon_18798_10Tribonema minus UTEX_B_3156 exonContig_288 27790..27836 +
exon_18798_11exon_18798_11Tribonema minus UTEX_B_3156 exonContig_288 28163..28323 +
exon_18798_12exon_18798_12Tribonema minus UTEX_B_3156 exonContig_288 28466..28531 +
exon_18798_13exon_18798_13Tribonema minus UTEX_B_3156 exonContig_288 28609..28665 +
exon_18798_14exon_18798_14Tribonema minus UTEX_B_3156 exonContig_288 29295..29436 +
exon_18798_15exon_18798_15Tribonema minus UTEX_B_3156 exonContig_288 31326..31576 +
exon_18798_16exon_18798_16Tribonema minus UTEX_B_3156 exonContig_288 31675..31743 +
exon_18798_17exon_18798_17Tribonema minus UTEX_B_3156 exonContig_288 32146..32343 +
exon_18798_18exon_18798_18Tribonema minus UTEX_B_3156 exonContig_288 32628..32864 +
exon_18798_19exon_18798_19Tribonema minus UTEX_B_3156 exonContig_288 32977..33075 +
exon_18798_20exon_18798_20Tribonema minus UTEX_B_3156 exonContig_288 34121..34369 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18798CDS_18798Tribonema minus UTEX_B_3156 CDSContig_288 20518..20562 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18798 ID=mRNA_18798|Name=jgi.p|Trimin1|354606|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2700bp|location=Sequence derived from alignment at Contig_288:20518..34369+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGGGAGGGCGTTGCGAGTGGCGGCAGCGCTGTCGCTGGCGCCCGT
GGACGATGACAACTTGCTGGTGGAGCATATATGGACGTGGCAGTACGATG
ACAGAGCTGTCATGATCAAGTTCGTGCCAGGCTCAGATCAGGTCATATCG
GTTCACAAGGCCGGCAATGTGCGCCTGTACGACAACCTTCAGAGTGATCC
TTACTACTACAAGCACTTGGTGGACATGACGGCCGACACCTACGACCTCG
GCGACCACGGCTTATTAGCGATGGAGTATCATCCAGACTGGGATGCGGGG
GTGCGCAAGATCTTTGTCCTCTACACGGGGGAGCCCAAGGACGTGAGGCA
GCTGCCCAATAACGACGCGGTGGAGGATGACAGGCCCACTAGCTGGGGGA
AGGGACCTCCCGGGAAGCACGGCCAGTTGTGGCCTGATAGCTGCCCCTGC
CTGGACTGCGACGGCGCCGGCAAGAACCGCGACGGCCTGATCTGCGAGCA
CCCGTACTACATCGACCGCATCTCCGTAGACCTGGACGCCGGAACTTCAA
AGAAGGACGTGACGCTCCTATCGGTGATGTGCGGCTCCTCGGACACGCAC
GGCCCCGGTGACCTCAAGATCATTGGCAAGGACCTAATCTACAGCACCGG
CGAGGGGTCACAGTTCACCGTCTTCGACTACGGCTTTGAGGACGACGGCT
GCTACAACTCAGACTCTGACTCACCCCTTTTCCCCCATCCCCCTTTCACC
GTCTTCAGCTACGGCTTTGAGGACGACGGCTGCTACAACTCAGACTCTGA
CTCACCCCTTTCCCCCATCCCCCTGTCCACCCCCGCTTTCACCGTCTTCG
ACAATGGCTTTGAAGATGACGGCTGGCTACGACCCCGATCATTCACCGTC
TTTGACTACGGTTTTGAAGACGACGGCTGCTACGACCCCGATCAGACGGC
GGGCCAGGGCAGCTTCCGCGCCATCCGCGAGACGTTCGGCAATGGCAAGA
TCGGCCGCATCCCGTACGACCTACTCGACTCCGACTCGGAGATCTCGCTC
GATCAGGTGGAGCTGGTGGCCAAGGGCGTGCGCCAGCCCGTGCGGCTGTT
CCACCACGAGAAGCAGGACCGGCTCGACGTCGGCTTTGGCGACGCGGGTA
CCACGGAGCGCATATTCTACTGCGACGTCGGCTTTGGCGACGCCGGCACC
ACGGAGCGCATCTTTTACGCCGACAACATCAGCAAGAAGCCCGACCAGCT
CAACTTTGGCTGGCCGTGCATCGAGGGCGTGCGGACAACGACGCTCGGCG
ACATAGGCGTATGGGACGCACCCAGCGAGCAGCTCGTTGAGGGCGTCAGA
ATGACAACGCTCGGAGACATTGGCGTCTGGGACGCACCCAGCGAGCAGGG
CGTGCGGACGACGATGCTCGGCTGCATTAGCATCTGGGTTGCCCCCAGCG
AGCAGGAGCGCATGAAGTGGCTGAAGGACAACGACCTGCCGCACTGCGCA
GCCACCGCCACCGCTGTGCAGGCCTGGGTGGACAAGAAGCCCGTGCCCGC
TGGCGGTGACACATCGTGGGAAGTGCCGTTCTTTGAGTACCGCGTAGGCA
TCATGGACAACGGCAACCCGGACCTCTGCTACGACGGCTTTGGCGCCATC
ACGAGCGTCTACTTCCATGACCCCGAGGCGTCAGGTCCCGCCGGAGCGCT
GCCATCCGTTTACGCAGGGAAGCTGATATTCTCGGACTATGCCAAGTCGT
GCACGTGGTACTTTGAGAACGGCGAGGATGGCCTGCCGGATACGACCAAG
CTGCCCAAGACGCTCATGGCGCAGACGGGGTTTGTGAACATTGTGCAGGA
TGGGCTACCGGACACGACCAAGCTGCTCAAGACGCTCATTGCACAGACGG
AGATTGTGAACATTGTGGGCCCCGATGGAGCCATGTATGGCGTAGACTAC
ACCAATGGTCGCCTGCTCAGGATGTCGGCCATCAATGCGGAGAAGGGGGG
CGGCAAGAAGGGGGGCACCACGGGCAATGCGAAGGGGGGAGGCGGCGATG
GTGGTGGCAAAAAGGGGGGCGGCGGAAAGAAGGGCGGTGGCAATGGTCCT
GCGGACGTCCCTGAGACGGACCCCCCCACCCCCGCCCCCACACCTGACGC
CGCGGGGGTACTGGACGCTAACACATGCCACGGTTCAAGAGGTGACATGC
CGACGCTTGGCTGGAAGCCCAAGGCAGGGGGTGCCCCCGGGGCCCTGGCG
GCGACACTCACGCTGAGCGCTGTGAACTTCAAGACTGCGCAGGGCAACAT
GCGCACGTTCGCGTGGAACGGGATGATGCCCGGCCCCATCATCCGCATGC
AGGAGCCATGGGGGCCACAGCGGCGGTCGCTGCTGGCAAGGGTGTGCACC
GCCGCACCTAACAGGAGCAGGCGACTGCGCAGCGCAGCTGGGGAGCGGCG
CCCCTGCGGCGTGTACCACCTCACCGTGAAGAATGACCTCAAGGACTGGG
TACTACCGGGCAAGAAGGGCAACACGGGCGGCACCATCAACACCATGCAC
GATCCCACCACCACCAACATCCACTTGCATGGACTGCACATCAGTGGCGA
GGCACCGGGTGATGACACGTTTACGGTCATTGAGGCTGGGGATGAGAACG
AGTACATCTACACCATCCCCTGCGACCACAGCGGCGGCACCAACTGGTGA
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protein sequence of jgi.p|Trimin1|354606

>Trimin1|354606|estExt_Genemark1.C_Ctg_2880003 ID=Trimin1|354606|estExt_Genemark1.C_Ctg_2880003|Name=jgi.p|Trimin1|354606|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=900bp
MGGRALRVAAALSLAPVDDDNLLVEHIWTWQYDDRAVMIKFVPGSDQVIS
VHKAGNVRLYDNLQSDPYYYKHLVDMTADTYDLGDHGLLAMEYHPDWDAG
VRKIFVLYTGEPKDVRQLPNNDAVEDDRPTSWGKGPPGKHGQLWPDSCPC
LDCDGAGKNRDGLICEHPYYIDRISVDLDAGTSKKDVTLLSVMCGSSDTH
GPGDLKIIGKDLIYSTGEGSQFTVFDYGFEDDGCYNSDSDSPLFPHPPFT
VFSYGFEDDGCYNSDSDSPLSPIPLSTPAFTVFDNGFEDDGWLRPRSFTV
FDYGFEDDGCYDPDQTAGQGSFRAIRETFGNGKIGRIPYDLLDSDSEISL
DQVELVAKGVRQPVRLFHHEKQDRLDVGFGDAGTTERIFYCDVGFGDAGT
TERIFYADNISKKPDQLNFGWPCIEGVRTTTLGDIGVWDAPSEQLVEGVR
MTTLGDIGVWDAPSEQGVRTTMLGCISIWVAPSEQERMKWLKDNDLPHCA
ATATAVQAWVDKKPVPAGGDTSWEVPFFEYRVGIMDNGNPDLCYDGFGAI
TSVYFHDPEASGPAGALPSVYAGKLIFSDYAKSCTWYFENGEDGLPDTTK
LPKTLMAQTGFVNIVQDGLPDTTKLLKTLIAQTEIVNIVGPDGAMYGVDY
TNGRLLRMSAINAEKGGGKKGGTTGNAKGGGGDGGGKKGGGGKKGGGNGP
ADVPETDPPTPAPTPDAAGVLDANTCHGSRGDMPTLGWKPKAGGAPGALA
ATLTLSAVNFKTAQGNMRTFAWNGMMPGPIIRMQEPWGPQRRSLLARVCT
AAPNRSRRLRSAAGERRPCGVYHLTVKNDLKDWVLPGKKGNTGGTINTMH
DPTTTNIHLHGLHISGEAPGDDTFTVIEAGDENEYIYTIPCDHSGGTNW*
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mRNA from alignment at Contig_288:20518..34369+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18798 ID=mRNA_18798|Name=jgi.p|Trimin1|354606|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13852bp|location=Sequence derived from alignment at Contig_288:20518..34369+ (Tribonema minus UTEX_B_3156 )
ATGGGCGGGAGGGCGTTGCGAGTGGCGGCAGCGCTGTCGCTGGCGGTATC
ATTTCTAAATGGCGCGCAAGCCGTAAAGTTCAAAGGCTTCAGCGCAGACA
ACCCAAAACCCGTTGTGGTGAGTCATTCCACCGGCAGCGATGCGCGCGAG
CAGAGTCGAGGCTGCTGTTCAGCAGGCCCCGCAGCCTTAAGCAGCCTGCA
CGAATGTTTTGCAATGCACATCACTGCTCACAAACTGCCCTGCGGGTGTA
TACGCAGTGTGCGTGCTGTGTTGGCTCGGATGAAGCTTCACACCCGCTGC
GCTGCAGCGCTGTGCTGCCCCAGCTCACTGAGTGCAAACTACCGTGCTGG
TTGCATGTGGTAAAGTTTTCAGCATTCAATGCTTCATTCGGGCCATTACA
CACGCCCGAGATTCACAACAGGGCCATCCCTAAATTGTGTACCCCTGATG
TCTGTTGGTCTGCTGCACGCGCCGCAGCCCGTGGACGATGACAACTTGCT
GGTGGAGCATATATGGACGTGGCAGTACGATGACAGAGCTGTCATGATCA
AGTTCGTGCCAGGCTCAGATCAGGTCATATCGGTTCACAAGGCCGGCAAT
GTGCGCCTGTACGACAACCTTCAGAGTGATCCTTACTACTACAAGGTGAG
CACCGTTAGTTCTATAACGATTTGAAAGCGCACTTTACTTGCTTCGGCAA
CGCATGACAGCCTCGTTTCCCAAGCCGGATCCCAGCGCATGGCCTCTTCT
TGGCGTACTGCTACTGTGCCGAAATTCCGAGTTGCACGGCCCGAAGTAAG
AAGTTCACCATCAGCTTCTATGTACTCTTGAACAGTTACCCAAGTTGCAT
GACAGTATGATGCTTACAAGTTTCGAGTGCTGGGTGAAATTTCATGTGAA
AGTCACAGTCACACAGCAATATCATGATTCACAACTGCATACCGAGTCGT
TTGTAGCTGCAGTGAGTCGTTTGTAGCTGCAGTGAGGGTTGCAAGTGGTT
TCGAAAGGGCACTATGGCAACGGCACGCTGTAAGCCCAGCTGCTGTTGCT
GGTTATGCAGTAATTGCATGCATTTCAAGGCATAGTTCACCAATGTCAGC
CTGCGCTAGTGGACTTGAAGTATGTGCTGACTTGAGGTAAGTCTTGGTTC
CGTGCACATGCAAGATTTCTGCAACATATACTGTGTGATTCAATGGCATC
GCCATACTCATGATCACTTGGAAATCATGCTGACAGGAGGTCGGAGCTCG
CTCGCATTGCTGCAGACGTGCACTTTGCAGATCACCGCATCATCACCGTC
ATGAACACTTTTGAAAAGCATCAAGCCGACATACATGGCCAGAGTCTGCT
CGCGTTGCTGAGCGTTGCCGCCACACATGTGCCACTCTGAACGCCGCAGC
ACCTGTTGGACAGATCATAGCCGGCACGTACAAACTTCAAAACTTGCACT
TTGTTGATGAAATGCATTGTGATCACTTTGAACCCATCATGCTGACATGA
GGTCAAAGTTTGCTCGCATTGCTGAGTGCTGCTGACACATATTTGCATCC
GTGAAACGCCGCAGCACCTGGTGGACATGACCGCCGATGCACACAAACTT
CAAACTCACACATCATTGCCTGTTCGCATGGCTGAGCGCTGCTGACACAT
GTCTGCACCTCTGAAATGCCGCAGCACTTGGTGGACATGACGGCCGACAC
CTACGACCTCGGCGACCACGGCTTATTAGCGATGGAGTATCATCCAGACT
GGGATGCGGGGGTGCGCAAGATCTTTGTCCTCTACACGGGGGAGCCCAAG
GACGTGAGGCAGCTGCCCAATAACGACGCGGTGGAGGATGACAGGCCCAC
TAGCTGGGGGAAGGGACCTCCCGGGAAGCACGGCCAGTTGTGGCCTGATA
GCTGTGAGTCCTGGTGTACGATTCCTGGAGGGGCGAAAAACTCTGTATCT
TGTGTAGTATGTGCAGTCAATGTGGCATCAGGACATGATGGTGATGGGTT
AGCTAGGGTGGCTTTTCATGCAGCTCACGCAGTACACGCAGTACATTGAA
AGAAAAAACCGAGCAGGAGTTGTCAGTTGTCAACTGCCACACAGGATGAT
AGGCCCACCAGCTGGGTGAAAGGATCCCCCCAGGAAGCACGGGCAGTTGT
GGCCGGACAGCTGTGACTATCTGTTTACGTTTTGTCGTCAGCATCTGATG
AATTTGATGATCAGGATGGTCAAATAGGGTGGCGCTGGCGTGCAGCCCAG
TCAATAAAGGATGAGCGGAAGGTGTCAGTTGATGACTGCGCTGGAAGATG
ACAGGCCCACTAGCTGGGGGACGGGACCCCCTCGGAAGCACGGCCAGACG
GCTGTGAGCACCTGTTGTCATCGTGGAACCAAAACCTAGTGATTAGGGGG
GGGGGGGGATATAATGGCTTTTTAAGTGGCTCACGCAGTACACTTAAACC
TGAGCGAGAGTCGTCAGCCGATAACTGCCGTGGAGGACAGGGCCACCAGC
AGGGGGAAAGGGACCCCCCCCCCCGCAAAGCACATGCAGCTGGGGCACGA
TAGTTTTCAGGGCCTCGTTGCGCCAATGCGGTATCAGAACTTCATGAGAA
TGGATCAGGTAGGGTGGCATTTTGCATGCAGCAGATGCAAAACTGTGACG
TGATGCAAATGTATACGAGTGCCCCATGTAGGTGCCAGTGTGGCATCAGA
GAAGAGTGTGAAAGCTGAGGCGTTGTGCCAGGGGCTTAAAAGGGGGCAAG
GGTGGTGCTTTGCTGCTGCAGCATATCCAAAAGGTGTGCAGCCGTTGTCA
GCAATGGTGATTCCATAGAATACGAGAGAGAGGTCAGGCAGCTAGGCTAG
GGAAAGGGACCCCCCCGGGAAGCACGGGCAGCTGTGGCCGAGAGCTGTGT
GTGCGCGAGGCACTTAAGTAGAAGGCACAAGCTAAGAAGCTGAGGCAAGG
GCACAAGGTCAGATTTTGGGGGAGTGTGGTGCTCTACGGTGCACAGAGGG
CAGAAGTTGAAGAGTGTGGTAACCAGGGCCTAGGGTTCAAGTTGGGGAAG
GTTGGCATGTGTCTGTTCCATCATCAAAGCAGAGAACGGAATCTCAGGAG
CTCAAGGGTAGGACTTCAATGTTAAAGTTTGGGGCGGGTAGGGCTCAGCA
AACATTGTGTGAGAATTGATGCCCATGAACGAGGCCACAAAAAGAACAAG
GGGCCACTTGCTAGGCGACAGACCCTAGGCAGCACACATGTGCAACCATG
AGTTGAGGCTGCAAGTGCTCCTCGTAGTAGGGAGCGAAACAGTGCTCAGG
TGGAGCATGGTCATATAGGATGAACGTTTTGGTGTCGTTTGGAGGAGATC
AGGGGGAGCTAGCCTAACCCTAACCTAACCCTAACCCTGAGCCTAATCCT
AAGCGGTGAAGAGGGTGTGGTATGCCTGGGTGAGCTAACAACATCGTTTG
AACGAAGGTACCGAGTTTGGCAGGTCAGCTGGCACAGCATGTGAGCACCG
AGAAGGGGGGGGTGTGGAGAAGGGGGGGGGGGGGGGGGGGGGGTACAGGC
TTGCCCCCTCCGCAAAGTGCGCACACATGTGCGTGCGTCTCAATTACAGC
AAACGCATGACGCTCCCCTGTTGAGGGATTGGTTTGCTTGTGCTAAGCGC
TGTTGTGCATTGCATATACTCTGCCGCATACCTACCTACACGAAGCCCCC
CCCGCCTCCCCCCTTGTTGAGCGCTGTCGCTTTTTTTTTCACAACTCCAC
GTCCTGACTGCTGACGCGTGTCCCGTGCTGAGCGCTGCTGCATTTTGCCG
TACTTGAAGTTGAGCGCTGACACATTTTCCTTTCAACTTCACGCGCTGCC
AGAATTTTTACTTTTTTCCCACAAAATTCACGTCGTCCTGAGCGCTAATT
TACGTCTCGTGCCGAGCGCTGCTGCGCAGGCCCCTGCCTGGACTGCGACG
GCGCCGTGCACTTATTGAGCGCTGCCGTGTTTTTAGATGGTTTTTCTTCC
TTCACAACTTCAAGTTCTGAGCGCTGACGTACCTCTCGTGCTGAACGCTG
CTGCGCAGGCCCCTGCCTGGACTGCGACGGCGCCGGCAAGAACCGCGACG
GCCTGATCTGCGAGCACCCGTACTACATCGACCGCATCTCCGTAGGTGCG
TACGTGAAGTGTTATGGCTAGGGTTGAATATCACCACGTATGACCTGCGC
ATCACCACTTCCGCTGCGAAAACAGCACCCCTACTACATCGACTGCATCT
CCTTAGGTGCGTGCATAAAGTATGGTTAGGGCTGAGCATCACCACGAATT
GAGCGTCACCACTTGCGCTTTGACCTCGAGAGCAGCGACGGCCTGATCTG
CGGGCACCCTTTGCTACATCGCCCGCTTGTCCGTACACGCGTGCTGAATG
TTTGATCGTCCACTTTGTTGAAGTCTGGTGTGTAAGCAGAGTTCAATCAA
ACCACGTAGCACTCTCTTGACCATCCTGTACATGCTGTACATGAAACAGG
CTGCCCCCCTCGCTTCAAGCCCATGTGGGGTTCGCCCCTGTCTTTCCCCC
CCCCCTTCTCCTTCAGACCTGGATGCCGGGATGTCGTGAGTGTGTTCAAT
CACATCGCCAAACCCTACCTTTAACCCTAGCCTTGAGCATCCTGCACATT
CTGAACACCAAACCGATCTCGAGCCGATTCGCCCATGTCTGTTTTGCACC
TGTCTTACTGCCCCCCCCCCCCCCCCCCCCCCCCGCGCTTTCTTCAGACC
TGGATGCCGGAACTTCAAAGAAGGACGTGACGCTCCTACTGGTAACTTCA
ACCGTAACCTTGAGCATGCTGTACATGCTGAACCTGAAACCAGCTGCCAC
CCTTGACTCGAGCCGACTCGCCCTTCACTTACCCCCTCCCCCCTCCCCCT
CCCCGTGCTTCTTTCAGACCTGGACGCCGGAACTTCAAAGAAGGACGTGA
CGCTCCTATCGGTGATGTGCGGCTCCTCGGACACGCACGGCCCCGGTGAC
CTCAAGATCATTGGCAAGGACCTAATCTACAGCACCGGCGAGGGGTCACA
GGTGCGCTTTAGGCAGGCAAACCTACGGTAGGTAACGCTTGCGACGGTCG
CCTGAGCAATGATTCATGCAGGGTAGGCAGATCATAGGGGTGGGCAGGTA
TAGTGCACTTGTGAGGCGCTGGGCAGGTATGGTGCACTTGTGAGGGTCAG
AGCATTCTGCAGGGACGTTGTTTGCAGACTGGCGAGAGTTCACAGGTGCA
CTTTGAGACAGGCAAAGGTCTACGGTAGGTATCACGTGCGGCGGTTGCTT
GAGAGCAGTGAAATGCATGGGGGTAAGCAGGTATAGTACACTTGCTAGAT
CATTAGCAAGGCCGTCGCCTGCAGCACCGGCGAGTGTTTTAAGTGCACTG
GAAGGCGGGCACTGCAACATTACAATAGACACTGGCTCAACTCCCGTTCC
CCCTCCCCACACACGCACACCCTGTACGCACAGTTCACCGTCTTCGACTT
GCTCACCCCCCCTGTGTGCATACAAACAGTTCGCCGTATTCAACTACGGC
TTTGAAAACCACGGCTGAGAGTCTAACTCACCACTTACCCCCCTCCCCCC
CCCCACTGCACTGCTGCGTGCATACGCGCAGTTCACCATCTTTGACTACG
GCTTCGAGGAATGGCTGCTTCGACTCAGACTCTGACTCACCCCTTGTTCC
CCCCTGCCTACCACCCCCCTGCGCGCATACACACAGTTCACCGTCTTCGA
CTACAGCTTTGAGGACGACGGCTGCTAGGACTCAGACTCTGACTCACCCC
TTGTTTCCCCCTTCCTACCACCCCCTTGCGCGCATACGCGCAGTTCACCG
TCTTCGACTACGGCTTTGAGGACGACGGCTGCTACAACTCAGACTCTGAC
TCACCCCTTTTCCCCCATCCCCCTGTCCACCCCCGCTGTGCGCATACGCA
TAGTTCACCGTCTTCAGCTACGGCTTTGAGGACGACGGCTGCTACAACTC
AGACTCTGACTCACCCCTTTCCCCCATCCCCCTGTCCACCCCCGCTGTGC
GCATACGCACTGTTCACCGTCTTCAGCTACGGCTTTGAAGACGACGGCTG
CTACGACTGAGTCTCTCACTCGCGTACGCCTTACTCACCTCCCCCCACCA
CTACCCCCCTGCGCGCATACGCACAGTTCACCGTCTTCGACAATGGCTTT
GAAGATGACGGCTGGCTACGACCCCGATCAGTCGGCGGGCCAGGACAGCT
TCCGCGCGATCCGCAACTGAGACTCTGACTCACCCCTTGCCCCCCCTCCC
AACCCCCCCCCCCCTTCGCGCATACGCACAGTTCACCGTCTTTGACTACG
GTTTTGAAGACGACGGCTGCTACGACCCCGATCAGACGGCGGGCCAGGGC
AGCTTCCGCGCCATCCGCGAGACGTTCGGCAATGGCAAGATCGGCCGCAT
CCCGTACGACCTACTCGACTCCGACTCGGAGATCTCGCTCGATCAGGTGG
AGCTGGTGGCCAAGGGCGTGCGCCAGCCCGTGCGGCTGTTCCACCACGAG
AAGCAGGACCGGCTGTACGTAGGTATGTATAGCAACTGCCATTTGTAGCA
TGGTATGTGTACTTTTCTTCTAAGATCATTGCAACTTCTCGTAAGGGCGT
GAGGCTGTTCCACCACGAGAAGCAGGACCGGCTGTACGTAGGTATATATA
GCATGCGTATCTTGAGTTTGTGTGTGTATGTGTGTGTGTGTGTGCGTGTG
TGTGCGCGCGCGCGCGCGCGCAATTTATAGATTGACGCGCAGCGCCCAGA
TACATGTGTACATACATACACTGCAAGCACGTAGGTACACATAGGTATAT
GCTGCATAAGTGCTTTGAACACATTCATGCCTAGTTCTCAACTACTTGCA
GTTCTCAGAACGGCGTGCGCCAGCCTGTGAGGGGATTGGCTGTACGTAGG
TATGCATAACATGACTATGTTTCCGAGTGTTTTGTGTGATTGTCGTGCGG
CTTTTCCGCCACGTTGCGCAGGTACGTAGGTGTGATTGGCATGTGTACTT
CAAGTATGCGCCACCGAGTTGCATTGCTCAGGCTACGCCGGCTTTACCGA
TGCACTACCATCTGAATTTACCCGTGAAGCTACACTTACATTTGAACTTT
GCCCCCACGCAGCATAAATCAGATGGCGTCAACTTTGCGCAGGACCGGGT
AGACATAATGTGCACCCTGAGCCTACCATTAAACCATGATTCAAACGCTA
ATCCCGTGTTGCATTGCTCAAGCGACGTCGGCTTTGGCGACGCGGGTACC
ACGGAGCGCATATTCTACTGTATCCCCTATATTTACCCTCAGAAACCTTT
GTGTACCCTCGAAACCTATTTTTACCCTTGAACCCTACATTCACCCTCGA
AATACATTTAGCACTAAACTCTAATGCTTGAACTCTTAACGTTGAATTAC
GTTGCGTCGCTCAGGCGATGTTGGTTTTGGCGACGCCGGCACCACGGAGC
GCATCTTCTATCCCTATTTACCATCGCGCCCTATTTTTACCCTTGAACCC
TGCATTTACCATCGAACCCTACATTTACCTCGAAATCTGTATTTACCCTT
GAACTCTAACCTTTGAACTCTAACCCTCTGCGTTGCATTGCTCAGGCGAC
GTCGGCTTTGGCGACGCCGGCACCACGGAGCGCATCTTTTACGCCGACAA
CATCAGCAAGAAGCCCGACCAGCTCAACTTTGGCTGGCCGTGCATCGAGG
GCGTGCGGACAACGACGCTCGGCGACATAGGCGTATGGGACGCACCCAGC
GAGCAGGTGATTTTTTAGCGCTGCTGGATTTGATACCTACCCTCAGAGTT
CGTTGAGGGCTTAGTGACACAGGCGTCTGGGCCGCCCCAGAGAGCAGGTG
ATCATTGCTGAGCGCTGCTGATTGTGATTTACTTACCTACCCCCAGAGCT
CGTTGAGGGCGTCAGAATGACAACGCTCGGAGACATTGGCGTCTGGGACG
CACCCAGCGAGCAGGTGATCATCGCTGAGCGCTGCTTATCTTGATGCCTA
CCCCTGTGCTGCGATGATACCTACCCTTTGTGCTCGTCAAGGGCGTGCGG
ACGACGATGCTCGGCTGCATTAGCATCTGGGTTGCCCCCAGCGAGCAGGT
GATCATTACTGAGCGCTGCTTAGTGTGATACCTACCTACACCTAGCGCTC
ATTGAGGGCGACGCTGGACGACATTGGCGTCTGCGACGCTCCCAGTGAGC
AGTGATTTGCTGAGCTGCTCATTTCAATACCTACCCCAAGTGCTGCTTAT
TGTGATACCTACCCCTAGTGCTCGTTGGAGGCGTCAGGACGACGACGCGC
GGCGACATTGCGAACTTGGCATTTGAGACGCCCCCAGCGAGCAGGTGGTC
ATTGCTGAGCGCTGCTTGTTGTGATACCTACCTACCCCCAATGCTCGTCG
TAGGCTCGGCGACACAGGCGGCTGGAACGCGTCCAGCGAGCTGGCGATTG
CTGAGCGCTGCTTGTTGTGATACCTACCCCTACCACTCTGCAGCGGCGTT
CAGCCCTTATTCTGGTCCTTTGTTTGCCCGCTGCGCACTGTGCAGGAGAG
CACTCAGTGGCTGCACATACCCACCCCGTGCGTACACACACATGCTTGAC
GCGCGCCCCACCTCCAGTGCTGCACCACTGACCTATCTGCCAGCAGCTTT
CACCCTTATACTGTGCAGCTGACCTGTGTTTTGTCATCCGTTTGCCTGCC
GCGCATTGCCTGCCACGCCCTGTGCAGGAGCGCATGAAGTGGCTGAAGGA
CAACGACCTGCCGCACTGCGCAGCCACCGCCACCGCTGTGCAGGCCTGGG
TGGACAAGAAGCCCGTGCCCGCTGGCGGTGACACATCGTGGGAAGTGCCG
TTCTTTGAGTACCGCGTAGGTACGTACTTGAAGTTGTGTCCAAAAATTTG
AAGTTTTGTGTTCACGTTGAAGAGGGACGGACACGAGCCCGTGCCCGCTG
GCGTCAACGCATTGTGGAGTGCCGTTCTTCAACTACCGCGTAGGTTCTGA
GGCAGACGAGGTCCTCCTGGAAGCCCTCCTGTAGTTGGCTTGGTTGGCGG
TCAGTGACCGATTTATAGCGTAGAGAGCGCATGTGTCAAACGTTTGACAC
ACAGCACATGTGTACACGAGTTGCATATTTGTTTTTCACAGGGCTTCCGC
CCCTCAAGCGGAAGTAAATGAAGTAAGTACATACTTGAAGTTGTGCTCAA
TGTTACCGGAACTGGCCTCTGAGTTTGTGGTTGAGTTGAAGTCTGGTGGG
CAAGACCCCCGTGCCCGCTGGCGGTGATGCGTCGCGGAGACTGCCGCGTA
GATTTATGGAACGAGTCGTTGAGTCAGAGTTAAAGTCATTACTGTGAATG
GGTAAAAGCGGCTGTTCTTTTTGGAAACGAATCACAAGATCGTAGAGCTC
TCGGTGACAAAGGATGGTGAGCCGCTAGTGCCTTCCACCAATAACCGTGG
TCGCCGCTGTTGCAGTCATTGGCCATGAGTCAAACAGTGCCATCATATTC
ACAGGTCAAGAGACTTCTGTGTGCGAGCTTGTGTTCGGTAGACCAGCTCC
AGCTGGTAGCCCAACACAGGAGGTGCAGCAGCTATTGACAGCGCTCTCGA
ATGAGCGTAGTGTAGAAGGTGGTGTGAGCGGGTTTTGAACCCAACTTCTA
CTTGAAGTTGTACTTGATTACTTCAAGTAGATATCGAATTCAAAAAGCGA
TGAGGGGAGCATTTGAAATTGTGGTGGTGTTGCAGCGGCGAACAAGAAGC
GGCTCCCCGTTTTTTTCATTATATTTACATTTATCTAGACTTCAAAGCTG
AGCGTGGCCGCATGCGCCGCCGCTGCCACAGGCATCATGGACACTAATTA
CCGCCTCTAGGCAGTTACCGCCATTAGGCAGCCTCTCACTCGCGCTGAAA
CAGGCCCTTTTTCGTTGTGTAGGGCGCGAATTTTTTGTTGTTGAATTTGT
GCTCAACTACTTCCAAGTAGAGTCTGAAAAGAGGGATGAGGGGAGCCTAT
GCAATCGTGGTGGCGTTGCAGTGGTGAACAAAAGCGGCTCGATTTCCCAC
ATGTACCTGGGCGCGAAGCTGAGCGCTGCCTCTTGCGTCGCCGCCCGCCG
CCGCCAGCAGGCATCATGGACAACGGCAACCTTACAACTGCAGCAGCATG
AGAGCTATTGTACGCCTAGTGGTAGCACGAGCTTCACTACAGCAAACTAC
ACTCTGCATACCTCTGGAGTAACCTTGATTACAGTGGTCCCATGCTGCCA
CGTCTCTGAGCTTAGGATTAGGGTTCAAATTAGAAAACGCCAAATGAGTA
AATGCCAACCCTGGAATTTTTAACCCTAAACCTAATTCCAGCCATTACAC
CTGAGCACTGCACCGCGCCCCCCCCCCCCCCGCGACTTGCAGGCATCATG
GACAACGGCAACCCCGCTGCAGCGGCGCGAGAGCTGTTCATACGCCTAGT
GGGAGCACGGGATTCACTACCAGTACACTTCGGCGAACTTCTGGACCAGC
ATTTGATCATGCTGTCATTTTTGCCGTCTCTGAGCCCCACACCAGAGCGC
TGCTTCATGCATCCCCCCCCCCCCCCCCCCTCCCCGCCACCCCCGCTTCC
AGGCATCATGGACAACGACAACCCGGACCTCTGCTACGACGGCATTGCTA
GGGTAGGGTTAGGAAACCCTCACTCCACCAACTCTTAACCCTAGCCCTGA
ACCTAGCCCACCACCTGAGCTCTGCCACATGCATCCCCCTCCTGCCCCCA
CTTGGCAGGCATCATGGACAACGGCAACCCGGACCTCTGCTACGACGGCT
TTGGCGCCATCACGAGCGTCTACTTCCATGACCCCGAGGCGTCAGGTCCC
GCCGGAGCGCTGCCATCCGTTTACGCAGGGAAGCTGATATTCTCGGACTA
TGCCAAGTCGTGCACGTGGTACTTTGAGAACGGCGAGGATGGCCTGCCGG
ATACGACCAAGCTGCCCAAGACGCTCATGGCGCAGACGGGGTTTGTGAAC
ATTGTGCAGGTGCGTCTCCGCAATGTTGAAGTCGGTTTCCGTAGCCCAGG
CTCCTTATGGTTATACGTCAACATTGGAGTTGTGTTTCTCGTCTTCTTGG
CAATGAGGATGGGCTACCGGACACGACCAAGCTGCTCAAGACGCTCATTG
CACAGACGGAGATTGTGAACATTGTGGTGCGTATTTATTGTTGTTCAACT
TGAAGTTATGGTTTGGCCCGCAAGGCTGTCTTTGGGCGATGCAAAGTCTT
GTATGTGGTACATGGAGAAGAGAAAAACGATGACGACGGCCTGCCAAGCT
GCCTAAGACGCTCATGGTGTAGACAGGGTTCGTGAACATTGCGCAGGTGC
GTCTCCGCTATGAGTGTACTTCAATGTTGAAGTCACTTTCAGTTGCCAAG
GCTCCATGAATACGTTGATGCGCAACGCCTGTTCTCCGCTGTCACCGTGC
GTGCAGGGCCTCAATGGAGCCATGTACGAGTAGACTAGAGCACACCACAT
TTACATGTATGTTCATGAACTGCATCATTGAATACGATTATGCTCAACGC
CTGTTATTGGTTGTAAACGTGCGTGCAGGGCCCCGATGGAGCCATGTATG
GCGTAGACTACACCAATGGTCGCCTGCTCAGGATGTCGGCCATCAATGCG
GAGAAGGGGGGCGGCAAGAAGGGGGGCACCACGGGCAATGCGAAGGGGGG
AGGCGGCGATGGTGGTGGCAAAAAGGGGGGCGGCGGAAAGAAGGGCGGTG
GCAATGGTCCTGCGGACGTCCCTGAGGTGAGCTGCAGCAGTCAGGGGGGG
GGTCTCCAGCTGTTTTGTGTACTTTTTCTTGTGAGAAGGCCTTAGGCCCC
CTCATGAGCATAAAGGGGGGAGGGGGGGGCTGGGGGGAGGGGGTGAAGCT
GAAACTGAGCTTGACGTGTGTACTTCTACTGGAATTGCAAATTTGATAGA
TGAACACATCATGCTTCGAAGTACACACATCATATGGCTGACTTGTTGGT
GAATTCCAGTACTCACTGATGCGACAACCCCCCTTCCCCCTCCCCATCCT
CCCTCACCAGACGGACCCCCCCACCCCCGCCCCCACACCTGACGCCGCGG
GGGTACTGGACGCTAACACATGCCACGGTTCAAGAGGTGACATGCCGACG
CTTGGCTGGAAGCCCAAGGCAGGGGGTGCCCCCGGGGCCCTGGCGGCGAC
ACTCACGCTGAGCGCTGTGAACTTCAAGACTGCGCAGGGCAACATGCGCA
CGTTCGCGTGGAACGGGATGATGCCCGGCCCCATCATCCGCATGCAGGTA
CGTATGTATGTATGGTTAGGGGTTGGGTCAGGGGTTAGGGCTGTGCTGCT
ATAGGAAGCCATCATCAGGAAGGGACCGGTCACTAGGTCTCGCCGCAGTT
CTGCCGCAGGAGCCATGGGGGCCACAGCGGCGGTCGCTGCTGGCAAGGGT
GTGCACCGCCGCACCTAACAGGAGCAGGCGACTGCGCAGCGCAGCTGGGG
AGCGGCGCGTAAAGGGAGTGGGGGAGGGCCATCTACATACCCTACCCTCA
CAGGGGGCGGTCTGACGCCATGGAGGCGTTGGACACCAACTGGCGCCGCC
GCCACTGCGACTGGTGGAACAGAACGCGCGCTACGGAGGACGAGGGGACA
TCCGCGTACCTGGCTAGGCACTACATTGAAGCGCGCTGAGGCAGCGCGCG
CGGGAGACGTTGGCCAACGCCGATTGCGGCGACAGCGAATGGGACCGAGC
GGTCACACGACGACAGCCTCAGCGACATGCAGCAGCTGCGGCTCAGTGCC
CCCAGCGGCGCAGCTCCAGCTGCTCCATATCGCTGAAGCTGTCGTCGCGC
GACCGCCCGGCCCCGCGGCGCTATCGCCGTGATCAGCGTTGACCAACATG
TCCCGCGCGCGCGCTGCCTCAGCTGCGCTTGGATGTAGCGCCGCGCCAGC
CATATCGTTTATAGATATAGCGCCGCGCTAGCGGCAGCCGCAGCACCTCG
TCGCGTCCACCAACAGTACAAGTGAACTTGCCAAAAGTACAAGTGAACTG
ACCTGCGGTACTGGTCCATGCCCGCCTGCATCCCCTTCATGGGGAACAGG
CGGTTGCGCTGTGGACATTGGAAAGATTCTGCAGAGAGACCTGGGGGGGC
AAGCAGCAGCGGGGTGTTTCACTTGTTGAGTGGTTCCAGCCAGTTGTCGG
CGTCGCTAAGGGGGGGGCATGACCTCCACGCAGACTCCTCTCTCCCCCTC
TCATACGCAACGACCGTACATGACCACATGACCGCACATACATATGCGTA
GCCTTGCGGCGTGTACTTTTTATTACTTCTCGCTCAGGGCGCGAAAAAGC
CCAGATGATTGGCATCTAGCTGTACGGAATCTACATGTCGTATGACAGTC
TGAAAGTGTCGTAACGACAACCACTCAAACGCTGCCGCCGCCAAATGGCA
TCTTGGGATGTACCACCTCACAGCATACCTACATGGTTCACAAAACATAC
ATGCGTACATACCGAAGCATATATTCATCCATACATACCCCTATGTCGCG
CAGCCCTGCGGCGTGTACCACCTCACCGTGAAGAATGACCTCAAGGACTG
GGTACTACCGGGCAAGAAGGGCAACACGGGCGGCACCATCAACACCATGC
ACGATCCCACCACCACCAACATCCACTTGCATGGACTGCACATCAGTGGC
GAGGCACCGGGTGATGACACGTTTACGGTCATTGAGGCTGGGGATGAGAA
CGAGTACATCTACACCATCCCCTGCGACCACAGCGGCGGCACCAACTGGT
GA
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Coding sequence (CDS) from alignment at Contig_288:20518..34369+

>mRNA_18798 ID=mRNA_18798|Name=jgi.p|Trimin1|354606|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2700bp|location=Sequence derived from alignment at Contig_288:20518..34369+ (Tribonema minus UTEX_B_3156 )
ATGGGCGGGAGGGCGTTGCGAGTGGCGGCAGCGCTGTCGCTGGCGCCCGT
GGACGATGACAACTTGCTGGTGGAGCATATATGGACGTGGCAGTACGATG
ACAGAGCTGTCATGATCAAGTTCGTGCCAGGCTCAGATCAGGTCATATCG
GTTCACAAGGCCGGCAATGTGCGCCTGTACGACAACCTTCAGAGTGATCC
TTACTACTACAAGCACTTGGTGGACATGACGGCCGACACCTACGACCTCG
GCGACCACGGCTTATTAGCGATGGAGTATCATCCAGACTGGGATGCGGGG
GTGCGCAAGATCTTTGTCCTCTACACGGGGGAGCCCAAGGACGTGAGGCA
GCTGCCCAATAACGACGCGGTGGAGGATGACAGGCCCACTAGCTGGGGGA
AGGGACCTCCCGGGAAGCACGGCCAGTTGTGGCCTGATAGCTGCCCCTGC
CTGGACTGCGACGGCGCCGGCAAGAACCGCGACGGCCTGATCTGCGAGCA
CCCGTACTACATCGACCGCATCTCCGTAGACCTGGACGCCGGAACTTCAA
AGAAGGACGTGACGCTCCTATCGGTGATGTGCGGCTCCTCGGACACGCAC
GGCCCCGGTGACCTCAAGATCATTGGCAAGGACCTAATCTACAGCACCGG
CGAGGGGTCACAGTTCACCGTCTTCGACTACGGCTTTGAGGACGACGGCT
GCTACAACTCAGACTCTGACTCACCCCTTTTCCCCCATCCCCCTTTCACC
GTCTTCAGCTACGGCTTTGAGGACGACGGCTGCTACAACTCAGACTCTGA
CTCACCCCTTTCCCCCATCCCCCTGTCCACCCCCGCTTTCACCGTCTTCG
ACAATGGCTTTGAAGATGACGGCTGGCTACGACCCCGATCATTCACCGTC
TTTGACTACGGTTTTGAAGACGACGGCTGCTACGACCCCGATCAGACGGC
GGGCCAGGGCAGCTTCCGCGCCATCCGCGAGACGTTCGGCAATGGCAAGA
TCGGCCGCATCCCGTACGACCTACTCGACTCCGACTCGGAGATCTCGCTC
GATCAGGTGGAGCTGGTGGCCAAGGGCGTGCGCCAGCCCGTGCGGCTGTT
CCACCACGAGAAGCAGGACCGGCTCGACGTCGGCTTTGGCGACGCGGGTA
CCACGGAGCGCATATTCTACTGCGACGTCGGCTTTGGCGACGCCGGCACC
ACGGAGCGCATCTTTTACGCCGACAACATCAGCAAGAAGCCCGACCAGCT
CAACTTTGGCTGGCCGTGCATCGAGGGCGTGCGGACAACGACGCTCGGCG
ACATAGGCGTATGGGACGCACCCAGCGAGCAGCTCGTTGAGGGCGTCAGA
ATGACAACGCTCGGAGACATTGGCGTCTGGGACGCACCCAGCGAGCAGGG
CGTGCGGACGACGATGCTCGGCTGCATTAGCATCTGGGTTGCCCCCAGCG
AGCAGGAGCGCATGAAGTGGCTGAAGGACAACGACCTGCCGCACTGCGCA
GCCACCGCCACCGCTGTGCAGGCCTGGGTGGACAAGAAGCCCGTGCCCGC
TGGCGGTGACACATCGTGGGAAGTGCCGTTCTTTGAGTACCGCGTAGGCA
TCATGGACAACGGCAACCCGGACCTCTGCTACGACGGCTTTGGCGCCATC
ACGAGCGTCTACTTCCATGACCCCGAGGCGTCAGGTCCCGCCGGAGCGCT
GCCATCCGTTTACGCAGGGAAGCTGATATTCTCGGACTATGCCAAGTCGT
GCACGTGGTACTTTGAGAACGGCGAGGATGGCCTGCCGGATACGACCAAG
CTGCCCAAGACGCTCATGGCGCAGACGGGGTTTGTGAACATTGTGCAGGA
TGGGCTACCGGACACGACCAAGCTGCTCAAGACGCTCATTGCACAGACGG
AGATTGTGAACATTGTGGGCCCCGATGGAGCCATGTATGGCGTAGACTAC
ACCAATGGTCGCCTGCTCAGGATGTCGGCCATCAATGCGGAGAAGGGGGG
CGGCAAGAAGGGGGGCACCACGGGCAATGCGAAGGGGGGAGGCGGCGATG
GTGGTGGCAAAAAGGGGGGCGGCGGAAAGAAGGGCGGTGGCAATGGTCCT
GCGGACGTCCCTGAGACGGACCCCCCCACCCCCGCCCCCACACCTGACGC
CGCGGGGGTACTGGACGCTAACACATGCCACGGTTCAAGAGGTGACATGC
CGACGCTTGGCTGGAAGCCCAAGGCAGGGGGTGCCCCCGGGGCCCTGGCG
GCGACACTCACGCTGAGCGCTGTGAACTTCAAGACTGCGCAGGGCAACAT
GCGCACGTTCGCGTGGAACGGGATGATGCCCGGCCCCATCATCCGCATGC
AGGAGCCATGGGGGCCACAGCGGCGGTCGCTGCTGGCAAGGGTGTGCACC
GCCGCACCTAACAGGAGCAGGCGACTGCGCAGCGCAGCTGGGGAGCGGCG
CCCCTGCGGCGTGTACCACCTCACCGTGAAGAATGACCTCAAGGACTGGG
TACTACCGGGCAAGAAGGGCAACACGGGCGGCACCATCAACACCATGCAC
GATCCCACCACCACCAACATCCACTTGCATGGACTGCACATCAGTGGCGA
GGCACCGGGTGATGACACGTTTACGGTCATTGAGGCTGGGGATGAGAACG
AGTACATCTACACCATCCCCTGCGACCACAGCGGCGGCACCAACTGGTGA
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