mRNA_18770 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354628
Unique NamemRNA_18770
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|354628 vs. uniprot
Match: A0A835YS19_9STRA (D5_N domain-containing protein n=5 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS19_9STRA)

HSP 1 Score: 1690 bits (4377), Expect = 0.000e+0
Identity = 881/992 (88.81%), Postives = 901/992 (90.83%), Query Frame = 2
Query:   77 LSPFYFSYPIGKFPIKLITSSQPHFFCCPHSKAGMDIDDFDLRAAENGFIDDEEPPEXXXXXXXXXXXXXXXXXXXXXGRPSPKRNTSYARQKMQQYRVPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPEDAETRLRFDIDVEVPY--NADHPLALTAAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGLKITCSDIKCTHKDMLGVRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYSTVAVMGGDDLQYYSGGDLHDLSFAELLRAKSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRAGTISWREVSPGTDARVCLVPKCAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLRSHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVDPQLQDLEPHLEAARAAXXXXXXXXXXXXXXXXDLTVLEAKAASLFAIKESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGGY 3016
            L P   SYPIGKF  +        FF  P  ++ MDIDDFDLRAAENGFI DEEPPE           XXXXX      RPSPKRNTSYARQK+QQY  PSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLP+DAETRLR DIDVEVPY  NADHPLALT AVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHG+KITCSDIKCTHKDMLG+RQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGY TVAVM         GGDLHDLSFAELLRA SILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIR GTISWREVSPGTDARVCLVP+CAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLR HDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYV+P+LQ+LEP+LEAA A XXXXXXXXXXXXXXXX+L  L+AKAASLFAIKESIKGTSKREAILKDVFST+RDEDFEKLLDVNKDIFSC+NGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLG SARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALR            G  +DAQMIKYISGGADISGRELFG QTSFSPTAVP ANTNEMPIIKAEPAI+QRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRE+LP          AAKRWYEGGLGEKPACCKLACDAFAA+NDTLQSWINDECELG REGADPALILCSSAFSGYNN RARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQ N KCVYAGLKSAGGY
Sbjct:   18 LKPILLSYPIGKFSHQTDHVISTTFFLLPSFESSMDIDDFDLRAAENGFIVDEEPPEEPPVPLATPPAXXXXXCAP---RPSPKRNTSYARQKVQQYLAPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETFFTDIIEDLHRCGSPFVLMENICRLPDDAETRLRLDIDVEVPYKLNADHPLALTPAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGVKITCSDIKCTHKDMLGIRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYENNGTMLHGAVKEKQQQHGGYKTVAVM---------GGDLHDLSFAELLRATSILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNKLTTADVQHIYEAAGGELQLQQIAGIRPGTISWREVSPGTDARVCLVPECAGSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARLFAKLRGHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAAYVEPRLQNLEPYLEAACAXXXXXXXXXXXXXXXXXELRDLKAKAASLFAIKESIKGTSKREAILKDVFSTIRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGCSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRAT---------GGRCVDAQMIKYISGGADISGRELFGKQTSFSPTAVPRANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAVVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNSRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQDNCKCVYAGLKSAGGY 988          
BLAST of jgi.p|Trimin1|354628 vs. uniprot
Match: A0A835Z1H9_9STRA (SF3 helicase domain-containing protein (Fragment) n=6 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H9_9STRA)

HSP 1 Score: 692 bits (1785), Expect = 6.570e-241
Identity = 350/366 (95.63%), Postives = 355/366 (96.99%), Query Frame = 2
Query: 1871 KDVFSTVRDEDFEKLLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 2938
            KDVFSTVRDEDFEKLLDVNKDIFSC+NGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAG+ASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAI+QRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRE+LP          AAKRWYEGGLGEKPACCKLACDAFAA+NDTLQSWINDECELG REGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK
Sbjct:    1 KDVFSTVRDEDFEKLLDVNKDIFSCQNGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGSASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAIMQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLRENLPVEAFLAGVVQAAKRWYEGGLGEKPACCKLACDAFAAENDTLQSWINDECELGPREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAK 366          
BLAST of jgi.p|Trimin1|354628 vs. uniprot
Match: A0A835Z1L1_9STRA (D5_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L1_9STRA)

HSP 1 Score: 191 bits (485), Expect = 9.880e-50
Identity = 138/385 (35.84%), Postives = 194/385 (50.39%), Query Frame = 2
Query: 1889 VRDEDFEKLLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAK-FRTPGDAKFPYDANDKTHFIKNTKLREHLP----------AAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAG 3010
            VRD+ F  LLD +KD+ S  +GVV+L TATLRPRVR D L  A++  ++ + P +  + + + D+TL+   RL RP  LE + R++GYSITGH REEIIV  +G  A N KG++  LL  VL  ++Y AP+S +       AGAASS M AL G R+  +DE+P     D Q  + ++GGA I  REL+  Q SF        N N    ++   A L+RI   P D +       +    D  +  H + + K++ +L            AK+WYE GLG  P CC         DN  +  WI + CE+G  EG      L +S    +N++ A + P    I       +M  +GF      R   +Q   K    GLK AG
Sbjct:   11 VRDKTFLNLLDADKDVLSVTDGVVDLRTATLRPRVRGDYLIYALSTPFDPEHPELHTIEKWMKDVTLS--ERLGRPEYLEFMQRLIGYSITGHTREEIIVMFIGNGA-NSKGVLHELLSDVLESLYYAAPRSIIVQTARGGAGAASSDMAALNGKRIGAVDEMPDEPLNDTQF-RLLAGGAGIPARELYSAQASFKNLCQIILNFNFPVQMRITHATLRRIMACPFDMQALPVVPMSGAALDPTNPRHILLDIKMKGNLSRAAFFSWAVAGAKKWYEEGLGPHPKCCADLRSHIMDDNADVGMWIAERCEVG--EG------LMASTKMAWNDFCASR-PEGNNITNASFRVEMGRRGFHIAQATR---TQLRDKRCCHGLKIAG 379          
BLAST of jgi.p|Trimin1|354628 vs. uniprot
Match: UPI000AB7246B (Uncharacterized protein n=2 Tax=Croceicoccus mobilis TaxID=1703339 RepID=UPI000AB7246B)

HSP 1 Score: 111 bits (278), Expect = 2.420e-21
Identity = 98/302 (32.45%), Postives = 142/302 (47.02%), Query Frame = 2
Query: 1916 LDVNKDIFSCENGVVELATATLRPRVRKDML-TRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEP-AILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPA 2815
            LD N  +    NGVV+L T  L P  R DML TR    DY+  +   P  +Q L ++           A +  + R LGY++TG   EEIIVF +G  A NGK I  +++ +++G     AP S L   +    G      M L GAR+V ++ELPAG+ +D Q +K ++G   IS REL+    +F P    W  TN  PIIK +   I +RI ++P   KF      K       K    +N  LR  +  A+++   G              + +D+D L  ++ D C +     ADPA
Sbjct:  450 LDANPMLLGVGNGVVDLTTGALVPN-RSDMLITRHCEADYDM-AATCPRWVQFLDEVFAGDQ------ATIHSVQRSLGYTLTGLNTEEIIVFCIGFGA-NGKSIFGNIVNRIIGGYSKVAPHSLLATRRRDDHGPRGDIAM-LEGARLVSVNELPAGMQMDEQAVKALAGREPISARELYEGFRTFDPRFTVWVRTNHRPIIKGDDDGIWRRIIVLPFRQKFEGASCDKH---LEAKLWAERNGILRWMIEGARQYLATGNLSLSPTILAEQRQYRSDSDLLGEFLAD-CTI-----ADPA 732          
BLAST of jgi.p|Trimin1|354628 vs. uniprot
Match: A0A3D2VPM9_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3D2VPM9_9GAMM)

HSP 1 Score: 110 bits (274), Expect = 4.590e-21
Identity = 114/440 (25.91%), Postives = 178/440 (40.45%), Query Frame = 2
Query: 1562 IGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVA--------------AYVDPQLQDLEPHLEAARAAXXXXXXXXXXXXXXXXDLTVLEAKAASLFAIKESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDY--NADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCS 2830
            +G  G   RF    +K  LW   Y       +I +L A              A +   LQ +   L A  A                     LE ++  L  +   ++GT+KR  +L      V     +  LD    + +  NG V+L T  LRP  R D+LT  V I Y  NA +P            T           L++ + R +GYS+TG VRE++++   G  + NGK +  ++L+++LG +  QA    L A K        + +    G R++   E   G   +  ++K ++GG  I  R +      F+PT   W +TN  P IK  + AI +RI +IP + KF   G+ +   D   +        L   +     W   GLG+  A  + A   +  + D L +WI + C +G R  A  A +  S
Sbjct:   89 LGLHGADIRFCPPWDKWLLWSGSYWQIDNRLDIERLAADVPKVIRKRAIDLTAELQSLLQKMAELLAAINADPSRARLLTQERARLLERKLKLEDESEWLIKLASKLEGTAKRSCMLLATRHKVVIHHSD--LDKGHFLLNASNGTVDLTTGVLRPHERADLLTHDVEIPYLQNATAP----AWLAFLHSTFGGD-----ADLIQFVQRAVGYSLTGDVREQVLLICHGVGS-NGKSVFLNILRKLLGGLAIQAAPDLLMADKQRRHPTEQADLF---GKRIIVCQETGEGRRFNETLVKQLTGGDGIRARRMHEDFWEFNPTHKLWLSTNHKPEIKGTDYAIWRRIRLIPFNVKFTDDGEPRKNPDMERQLTAELPGILAWAVAGCLDWQRNGLGKAEAV-EAATANYQQEMDVLAAWIGECCVVGKRFEAKAADLYAS 512          
BLAST of jgi.p|Trimin1|354628 vs. uniprot
Match: A0A3C1SNC0_9GAMM (SF3 helicase domain-containing protein n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3C1SNC0_9GAMM)

HSP 1 Score: 108 bits (269), Expect = 3.130e-20
Identity = 84/315 (26.67%), Postives = 144/315 (45.71%), Query Frame = 2
Query: 1916 LDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGE-------KPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSA 2836
            LD  + + + +NG ++L+  TLR   R D+LT    I Y  D+   P   + L+++     +      L+  + R +GYS+TG VRE++++   G  + NGK +  ++++++LG +  QA    L A +        + +    G R+V   E   G   +  ++K ++GG  I+ R +F    +F PT   W +TN  P I+  + AI +RI +IP + KF  PG+ +   D           KL + +P    W   G  +        P   K A   +  + D L +W+ D C +     A  A +  S A
Sbjct:  444 LDKGRFLLNAKNGTIDLSAGTLRGHRRVDLLTHDTEIVYRPDAAA-PTWERFLSEVFDGDAD------LIRFVQRAVGYSLTGDVREQVLLICHGNGS-NGKSVFLNIVRKLLGKLALQAAPDLLMADRHRRHPTEQADLF---GKRLVVCQETAEGRRFNEALVKQLTGGDAITARRMFEDNWTFEPTHKLWLSTNHRPEIRGTDHAIWRRIRLIPFNVKFHIPGEGEPVKDTG------MEAKLTDEMPGIMAWAVRGCLDWQREGLRAPEAVKAATANYQQEQDVLAAWLADCCIVKRTADAKAADLYGSYA 741          
BLAST of jgi.p|Trimin1|354628 vs. uniprot
Match: A0A257JK46_9PROT (SF3 helicase domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium PA3 TaxID=2015571 RepID=A0A257JK46_9PROT)

HSP 1 Score: 106 bits (265), Expect = 3.710e-20
Identity = 103/374 (27.54%), Postives = 168/374 (44.92%), Query Frame = 2
Query: 1916 LDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEP-AILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREH-------LPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPALPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGG 3013
            LD    +    NGVV+L    L P      +TR    D++  S + P  ++ L  +       ++   LL      LGY++TG+  EEI++F +G  A NGK I  +++  +LG     AP   L + +    G  +   M L GAR+V ++ELPAG+ LD Q++K ++G   IS R L     ++ P   PW  TN  PI+K +   I +RI I+P    F            +++   ++   LRE        +  A+R+   GL   PA  K     +  D+D L  ++  EC       A  A +   + F  + N+   ++  + P  K+   +++  +GF   D         N K  Y GL+++GG
Sbjct:  195 LDAKPLLLGVGNGVVDLRRKRLLPNEPGYFITRYCYADFDP-SAQCPSWLRSLDAMFQGDTATIDAVQLL------LGYTLTGYSTEEIMIFCVGFGA-NGKSIFGNVVAAILGDYSRTAPSQLLASRRTDDHGPRNDMAM-LDGARLVSINELPAGMHLDEQVVKQLAGREPISARFLHKEYFTYEPRFTPWVRTNHKPIVKGDDEGIWRRIVILPFRRTFAP----------HEQDPHLEGKLLRERDGILAWMVEGAQRYLREGLKLSPAM-KRELAQYRTDSDMLGEFLA-ECTAT----ATGARVEQKTLFLSWQNWC--KDNGVQPGSKKTFTQRLKERGFPPKDS--------NGKRYYQGLRTSGG 533          
BLAST of jgi.p|Trimin1|354628 vs. uniprot
Match: UPI001FB9F2E6 (phage/plasmid primase, P4 family n=1 Tax=Ligilactobacillus sp. AF129 TaxID=2886039 RepID=UPI001FB9F2E6)

HSP 1 Score: 107 bits (268), Expect = 3.790e-20
Identity = 78/291 (26.80%), Postives = 147/291 (50.52%), Query Frame = 2
Query: 1919 DVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGR---SARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMA-LRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKA-EPAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWIND 2776
            D   +I +  +G+V+L++ +++P   +D++T++ N + +      P   + + DI  +       P L+E + +++GY+ITG V E++ VFLLG+   +  NGK ++  +L+Q+LG          +T  K  ++ + + + +A  +GAR++   E+  G  L   M+K ++GG  I+ + L+    SF+PT   W ++N  PII   +  I +R+  IP  AK       K P+   DK    K   +   +  A ++   G+ + P       D +  D D + ++IND
Sbjct:  435 DRKTNIINTPSGIVDLSSGSIKPATTEDLVTKSTNAEIS--EIETPIFDKFMLDIFPS------HPELIELVQKLIGYTITGTVAEQLTVFLLGKGNENGANGKSVLVEVLRQILGDYAVSIQPETITYSKTTNSSSNTDNQIADTKGARMIATSEIERGAKLSESMLKRLTGGEMITAKRLYEKPISFTPTGTLWMSSNYKPIISGTDNGIWRRLVFIPMTAKITK----KDPH-LKDKLMTEKAGIMNWIIEGALKYQRDGI-QLPKIITNEVDEYREDMDDVATFIND 711          
BLAST of jgi.p|Trimin1|354628 vs. uniprot
Match: UPI0003455EE6 (phage/plasmid primase, P4 family n=2 Tax=unclassified Pandoraea TaxID=2624094 RepID=UPI0003455EE6)

HSP 1 Score: 107 bits (267), Expect = 5.040e-20
Identity = 90/319 (28.21%), Postives = 146/319 (45.77%), Query Frame = 2
Query: 1919 DVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLR-ILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFY-QAPQSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAE-PAILQRIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLACDAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRAR 2866
            D +  +    NGVV+L T   R    +DM+T   +  ++  + R P+    L  +   AP+R+     L R LR +LGYS+TG ++E+   F+LGR + NGKG +   ++ V+G  +  Q   SFL      +A   +  +MAL+  R++   E      +D    K ++GG  +SGR  +G   SF P      +TNEMP    E  A+ +R+ +IP   KF     A    D +DK     +  L   +  A  + + G   + A  + A        D+++ WI+ EC+  +        I    AF  Y+ +  R
Sbjct:  449 DTDPYLLGVPNGVVDLRTKEFRAGRPQDMITCTTDAKFDPTA-RCPQFAAFLQSV---APDRV-----LRRFLRSVLGYSMTGLIKEQKAFFMLGRGS-NGKGTLTRAIENVVGPFYSGQMSPSFLKGANKGNANGPTPALMALQRPRILFCTESERRGGIDEPFFKQLTGGDQVSGRHNYGETESFRPRGKLLLSTNEMPDWDRENDALWRRVMVIPFTQKF---SGASRDNDLDDKLATEASGILNWLIAGASDYLQAGRLPRCAQVEAATSDARTRADSVRMWIDAECKRSAN-----GKIAAQDAFDAYSRFTGR 749          
BLAST of jgi.p|Trimin1|354628 vs. uniprot
Match: A0A174BTY0_9FIRM (Uncharacterized conserved protein n=2 Tax=Eubacteriales TaxID=186802 RepID=A0A174BTY0_9FIRM)

HSP 1 Score: 103 bits (258), Expect = 1.550e-19
Identity = 87/299 (29.10%), Postives = 136/299 (45.48%), Query Frame = 2
Query: 1913 LLDVNKDIFSCENGVVELATATLRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLERLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAPQSFLTACKAVSAGAASSHMMA-LRGARVVHLDELPAGVALDAQMIKYISGGADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQ-RIEIIPCDAKFRTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWY---------EGGLGEKPACCKLACDAFAADNDTLQSWIND 2776
            + D    +F+C+N  V L T    P    D LT+  N+ Y+ +     E  + ++DI        +   L+E L R LGYS++    +E      G S RNGKG + S +Q ++G     A      + K  S G  +S  +A L GAR V + E   G+ LD+ +IK +SG   I+ R L+     F  +   W NTN +P I  +      R+++IP +  F   G+     D  DK    + TK RE++  A  W          EGGL + P   +   +A+ A +D +  ++ D
Sbjct:  115 IFDKQPYLFNCQNCTVNLTTGAANPHDPYDYLTKISNVWYDPEESG-EEFQKFISDIMQ------DNSELIEYLKRALGYSLSAATFQECFFITYGESTRNGKGTLNSTMQNMMGDYAKSASYETFESKKYKSGGGGTSEDIARLAGARYVSVSEPQEGMTLDSALIKMLSGNDTITARNLYEKSFEFVASFKIWINTNHLPNISDDTVFKSGRVQLIPFNRHF---GE-----DEQDKGLKARLTK-RENISGAFNWCMEGFQLMATEGGL-KVPEVIRQEIEAYRAKSDRIGMFLED 396          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354628 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YS19_9STRA0.000e+088.81D5_N domain-containing protein n=5 Tax=Tribonema m... [more]
A0A835Z1H9_9STRA6.570e-24195.63SF3 helicase domain-containing protein (Fragment) ... [more]
A0A835Z1L1_9STRA9.880e-5035.84D5_N domain-containing protein n=1 Tax=Tribonema m... [more]
UPI000AB7246B2.420e-2132.45Uncharacterized protein n=2 Tax=Croceicoccus mobil... [more]
A0A3D2VPM9_9GAMM4.590e-2125.91SF3 helicase domain-containing protein n=1 Tax=Can... [more]
A0A3C1SNC0_9GAMM3.130e-2026.67SF3 helicase domain-containing protein n=1 Tax=Can... [more]
A0A257JK46_9PROT3.710e-2027.54SF3 helicase domain-containing protein (Fragment) ... [more]
UPI001FB9F2E63.790e-2026.80phage/plasmid primase, P4 family n=1 Tax=Ligilacto... [more]
UPI0003455EE65.040e-2028.21phage/plasmid primase, P4 family n=2 Tax=unclassif... [more]
A0A174BTY0_9FIRM1.550e-1929.10Uncharacterized conserved protein n=2 Tax=Eubacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_301contigContig_301:4821..7868 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354628|estExt_Genemark1.C_Ctg_3010001
BRITEko00000
KEGG koko:K06919
DescriptionD5 N terminal like
COG categoryS
Max annot lvl1224|Proteobacteria
EggNOG OGsCOG3378@1|root,COG3378@2|Bacteria,1MV7I@1224|Proteobacteria,42YMP@68525|delta/epsilon subdivisions,2WUNJ@28221|Deltaproteobacteria,2MGFT@213115|Desulfovibrionales
Evalue1.37e-24
Seed ortholog573370.DMR_15020
Hectar predicted targeting categoryother localisation
TranscriptId354950
TrackFilteredModels1
ProteinId354628
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354628gene_18770Tribonema minus UTEX_B_3156 geneContig_301 4821..7868 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18770_1exon_18770_1Tribonema minus UTEX_B_3156 exonContig_301 4821..7485 +
exon_18770_2exon_18770_2Tribonema minus UTEX_B_3156 exonContig_301 7515..7868 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_18770UTR5_18770Tribonema minus UTEX_B_3156 five_prime_UTRContig_301 4821..4998 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18770CDS_18770Tribonema minus UTEX_B_3156 CDSContig_301 4999..7485 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354628Trimin1|354628|estExt_Genemark1.C_Ctg_3010001Tribonema minus UTEX_B_3156 polypeptideContig_301 4999..7868 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18770 ID=mRNA_18770|Name=jgi.p|Trimin1|354628|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3019bp|location=Sequence derived from alignment at Contig_301:4821..7868+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TCCTATTTCTCCTATTTTCCTATCATGCATACCCAGATTTAGTGCTTCAG
GAGGCCAGTGATTGCAAGACACGCACTTAAGCCCATTTTACTTTTCCTAT
CCGATAGGAAAGTTTCCCATCAAACTGATCACGTCATCTCAACCACATTT
TTTTTGTTGCCCTCATTCAAAAGCAGGCATGGACATCGACGACTTTGACC
TGCGAGCAGCGGAGAATGGCTTTATTGATGATGAGGAGCCCCCTGAAGAG
CCGCCTATGCCGCTTGCCACCCCGCCGGCTGCTGCACCAGCTGCTCCATG
TGCACCCCCGGGCCGCCCCTCGCCCAAGCGCAACACCAGCTACGCGAGGC
AGAAGATGCAGCAGTACCGCGTGCCTTCCGGCCAGGGCATCAAGGGGTCG
CACAACGGCATGGATGACATGCGCGGAGTGTTCGACGTGCCCAACTATGA
GACTGATGCCGATGTGCGCGAGACCTTCTTCACCGACATCATTGAGGACC
TGCACCGCTGCGGCTCGCCCTTTGTGCTGATGGAGAACATCTGCAGGCTA
CCGGAAGATGCAGAGACGCGCCTGCGTTTCGACATTGACGTGGAAGTACC
TTATAACGCCGACCATCCACTTGCCCTCACCGCCGCCGTCGCCCACAAGT
TCTGCAAGACGCTGTGGGACGTGTTGCACGAGTGCACCGGCATCAGCGGC
GCCTCGCGCTTCTTCGTAGACGCCAAGGGCGCGCCCACGCCGACAGTTGC
AGGCATGTGGAAGCACGGCTTGAAGATTACGTGCAGCGACATCAAGTGCA
CACACAAGGACATGCTGGGCGTTAGGCAGCTCATGAACGACCGCTACAGC
GCGTGGGGGCACGAGGAGTGGCTGGACGGCAAGGAGGCGCACGAGATGCA
GATCATCGACCCGTGCATCTACGAGAACAACGGCACTATGCTGCACGGCG
CGGTCAAGGAGAAACAGCAGCAGCACGGCGGCTACAGCACGGTGGCAGTG
ATGGGCGGTGACGACCTTCAGTACTACAGCGGGGGCGACTTGCACGACCT
CTCCTTCGCTGAGCTGCTGCGCGCCAAATCCATCCTGCACCATGACGAGA
GCACCGCGAAACTGCAATGGCGCGCGGGCAAGGAGCCGGTCATTGTGCAG
CGGCGTGGTGCCAAGCGCACGCGCCGCAGTGCCGGCGCGGTAGCGCTGGC
CGCTGCAGCGGAGCACTACACCAACAAACTCACCACTGCAGATGTGCAGC
ACATCTACGAGGCGGCAGGGGGGGAGCTGCAGCTGCAGCAGATTGCCGGC
ATCAGGGCCGGCACCATCTCATGGCGGGAGGTGAGCCCCGGCACTGATGC
TAGGGTGTGCCTTGTGCCCAAATGTGCCGGCAGTGGCCACAGCGACAACG
CATTGCTTATCGAGTGCTATCACGGGCTCAAGTACAAGTGCTGCTCCACC
GGGAAGTGCTTGTACCTGGAGCGCTGGGAGACCGAAGAGGACCTGCTCTT
CGGTGGTGACAACGGGCTCGCCAGGCTGTTTGCCAAGCTGCGCAGCCACG
ACGTCAAGAACATTGGCGGCGACGGCGACAAGGCGCGATTCATCATCTAC
TGCGAAAAGACGGCGCTGTGGAAGCCGCGCTACAACAGTTTCGTGCGCTG
CACCGAGATACCCAAGCTGGTGGCCGCCTACGTCGATCCGCAACTACAGG
ATCTGGAGCCGCACCTGGAGGCGGCGCGTGCCGCTGCTCGCACACGCAGT
AGGGCAGAGGAAGAGGATGAGGAGGCGGACGAGGACCTAACAGTTTTGGA
GGCCAAAGCGGCCTCCCTCTTTGCCATCAAAGAGAGCATCAAGGGCACGA
GCAAGCGCGAGGCCATCTTGAAGGACGTATTCAGCACCGTACGCGACGAG
GATTTCGAAAAGCTACTCGACGTCAACAAGGACATCTTCAGCTGCGAAAA
CGGCGTGGTGGAGCTGGCCACTGCCACGCTTCGCCCACGCGTGCGGAAGG
ACATGCTGACCCGTGCCGTCAACATTGACTACAATGCTGACTCGCCGCGC
ATCCCCGAAGTTATGCAGCTTCTGACCGACATCACCCTCGCCGCGCCGAA
TCGCCTCAACCGCCCAGCGCTGCTGGAGCGCCTGCTGCGCATACTGGGCT
ACTCCATCACGGGCCACGTGCGCGAGGAGATCATTGTATTCCTTCTCGGC
CGCAGCGCGCGCAATGGCAAGGGCATCATCGAGAGCCTGCTGCAGCAGGT
TCTCGGCTGCATGTTCTACCAGGCGCCGCAAAGCTTTCTGACGGCATGCA
AGGCGGTGTCGGCGGGTGCCGCGTCATCGCACATGATGGCGCTACGTGGT
GCACGCGTGGTCCACCTCGACGAGCTGCCGGCGGGTGTTGCGTTGGACGC
GCAGATGATTAAGTACATCAGCGGCGGTGCCGACATCTCGGGGCGAGAGC
TGTTTGGCACGCAGACGTCGTTTAGCCCAACCGCAGTTCCGTGGGCCAAC
ACCAACGAGATGCCAATCATCAAGGCGGAGCCGGCGATATTGCAACGCAT
TGAAATCATCCCCTGCGATGCAAAGTTTCGCACGCCCGGGGATGCCAAGT
TCCCCTACGATGCCAATGATAAGACACACTTCATCAAGAACACCAAACTG
CGCGAACACCTGCCCGCGGCCAAGAGGTGGTACGAGGGTGGGCTGGGGGA
GAAACCGGCTTGCTGCAAGCTGGCATGCGACGCTTTCGCCGCTGACAACG
ACACGCTACAAAGCTGGATTAACGACGAGTGCGAGCTCGGATCCAGGGAG
GGCGCCGATCCGGCACTCATCTTGTGTAGCAGCGCGTTCAGCGGTTACAA
CAATTACCGTGCGCGCCAGGAGCCAGCGCTACCGCCAATCAAGAAACGTG
ACATGCACGAGCAGATGGCGGCCAAGGGTTTTGCCAAGATAGATGACTAC
AGGAAGGCGCACAGCCAGTACAATCTCAAATGCGTGTACGCCGGGCTCAA
GTCTGCGGGCGGATACTAG
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protein sequence of jgi.p|Trimin1|354628

>Trimin1|354628|estExt_Genemark1.C_Ctg_3010001 ID=Trimin1|354628|estExt_Genemark1.C_Ctg_3010001|Name=jgi.p|Trimin1|354628|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=947bp
MDIDDFDLRAAENGFIDDEEPPEEPPMPLATPPAAAPAAPCAPPGRPSPK
RNTSYARQKMQQYRVPSGQGIKGSHNGMDDMRGVFDVPNYETDADVRETF
FTDIIEDLHRCGSPFVLMENICRLPEDAETRLRFDIDVEVPYNADHPLAL
TAAVAHKFCKTLWDVLHECTGISGASRFFVDAKGAPTPTVAGMWKHGLKI
TCSDIKCTHKDMLGVRQLMNDRYSAWGHEEWLDGKEAHEMQIIDPCIYEN
NGTMLHGAVKEKQQQHGGYSTVAVMGGDDLQYYSGGDLHDLSFAELLRAK
SILHHDESTAKLQWRAGKEPVIVQRRGAKRTRRSAGAVALAAAAEHYTNK
LTTADVQHIYEAAGGELQLQQIAGIRAGTISWREVSPGTDARVCLVPKCA
GSGHSDNALLIECYHGLKYKCCSTGKCLYLERWETEEDLLFGGDNGLARL
FAKLRSHDVKNIGGDGDKARFIIYCEKTALWKPRYNSFVRCTEIPKLVAA
YVDPQLQDLEPHLEAARAAARTRSRAEEEDEEADEDLTVLEAKAASLFAI
KESIKGTSKREAILKDVFSTVRDEDFEKLLDVNKDIFSCENGVVELATAT
LRPRVRKDMLTRAVNIDYNADSPRIPEVMQLLTDITLAAPNRLNRPALLE
RLLRILGYSITGHVREEIIVFLLGRSARNGKGIIESLLQQVLGCMFYQAP
QSFLTACKAVSAGAASSHMMALRGARVVHLDELPAGVALDAQMIKYISGG
ADISGRELFGTQTSFSPTAVPWANTNEMPIIKAEPAILQRIEIIPCDAKF
RTPGDAKFPYDANDKTHFIKNTKLREHLPAAKRWYEGGLGEKPACCKLAC
DAFAADNDTLQSWINDECELGSREGADPALILCSSAFSGYNNYRARQEPA
LPPIKKRDMHEQMAAKGFAKIDDYRKAHSQYNLKCVYAGLKSAGGY*
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mRNA from alignment at Contig_301:4821..7868+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18770 ID=mRNA_18770|Name=jgi.p|Trimin1|354628|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3048bp|location=Sequence derived from alignment at Contig_301:4821..7868+ (Tribonema minus UTEX_B_3156 )
TCCTATTTCTCCTATTTTCCTATCATGCATACCCAGATTTAGTGCTTCAG GAGGCCAGTGATTGCAAGACACGCACTTAAGCCCATTTTACTTTTCCTAT CCGATAGGAAAGTTTCCCATCAAACTGATCACGTCATCTCAACCACATTT TTTTTGTTGCCCTCATTCAAAAGCAGGCATGGACATCGACGACTTTGACC TGCGAGCAGCGGAGAATGGCTTTATTGATGATGAGGAGCCCCCTGAAGAG CCGCCTATGCCGCTTGCCACCCCGCCGGCTGCTGCACCAGCTGCTCCATG TGCACCCCCGGGCCGCCCCTCGCCCAAGCGCAACACCAGCTACGCGAGGC AGAAGATGCAGCAGTACCGCGTGCCTTCCGGCCAGGGCATCAAGGGGTCG CACAACGGCATGGATGACATGCGCGGAGTGTTCGACGTGCCCAACTATGA GACTGATGCCGATGTGCGCGAGACCTTCTTCACCGACATCATTGAGGACC TGCACCGCTGCGGCTCGCCCTTTGTGCTGATGGAGAACATCTGCAGGCTA CCGGAAGATGCAGAGACGCGCCTGCGTTTCGACATTGACGTGGAAGTACC TTATAACGCCGACCATCCACTTGCCCTCACCGCCGCCGTCGCCCACAAGT TCTGCAAGACGCTGTGGGACGTGTTGCACGAGTGCACCGGCATCAGCGGC GCCTCGCGCTTCTTCGTAGACGCCAAGGGCGCGCCCACGCCGACAGTTGC AGGCATGTGGAAGCACGGCTTGAAGATTACGTGCAGCGACATCAAGTGCA CACACAAGGACATGCTGGGCGTTAGGCAGCTCATGAACGACCGCTACAGC GCGTGGGGGCACGAGGAGTGGCTGGACGGCAAGGAGGCGCACGAGATGCA GATCATCGACCCGTGCATCTACGAGAACAACGGCACTATGCTGCACGGCG CGGTCAAGGAGAAACAGCAGCAGCACGGCGGCTACAGCACGGTGGCAGTG ATGGGCGGTGACGACCTTCAGTACTACAGCGGGGGCGACTTGCACGACCT CTCCTTCGCTGAGCTGCTGCGCGCCAAATCCATCCTGCACCATGACGAGA GCACCGCGAAACTGCAATGGCGCGCGGGCAAGGAGCCGGTCATTGTGCAG CGGCGTGGTGCCAAGCGCACGCGCCGCAGTGCCGGCGCGGTAGCGCTGGC CGCTGCAGCGGAGCACTACACCAACAAACTCACCACTGCAGATGTGCAGC ACATCTACGAGGCGGCAGGGGGGGAGCTGCAGCTGCAGCAGATTGCCGGC ATCAGGGCCGGCACCATCTCATGGCGGGAGGTGAGCCCCGGCACTGATGC TAGGGTGTGCCTTGTGCCCAAATGTGCCGGCAGTGGCCACAGCGACAACG CATTGCTTATCGAGTGCTATCACGGGCTCAAGTACAAGTGCTGCTCCACC GGGAAGTGCTTGTACCTGGAGCGCTGGGAGACCGAAGAGGACCTGCTCTT CGGTGGTGACAACGGGCTCGCCAGGCTGTTTGCCAAGCTGCGCAGCCACG ACGTCAAGAACATTGGCGGCGACGGCGACAAGGCGCGATTCATCATCTAC TGCGAAAAGACGGCGCTGTGGAAGCCGCGCTACAACAGTTTCGTGCGCTG CACCGAGATACCCAAGCTGGTGGCCGCCTACGTCGATCCGCAACTACAGG ATCTGGAGCCGCACCTGGAGGCGGCGCGTGCCGCTGCTCGCACACGCAGT AGGGCAGAGGAAGAGGATGAGGAGGCGGACGAGGACCTAACAGTTTTGGA GGCCAAAGCGGCCTCCCTCTTTGCCATCAAAGAGAGCATCAAGGGCACGA GCAAGCGCGAGGCCATCTTGAAGGACGTATTCAGCACCGTACGCGACGAG GATTTCGAAAAGCTACTCGACGTCAACAAGGACATCTTCAGCTGCGAAAA CGGCGTGGTGGAGCTGGCCACTGCCACGCTTCGCCCACGCGTGCGGAAGG ACATGCTGACCCGTGCCGTCAACATTGACTACAATGCTGACTCGCCGCGC ATCCCCGAAGTTATGCAGCTTCTGACCGACATCACCCTCGCCGCGCCGAA TCGCCTCAACCGCCCAGCGCTGCTGGAGCGCCTGCTGCGCATACTGGGCT ACTCCATCACGGGCCACGTGCGCGAGGAGATCATTGTATTCCTTCTCGGC CGCAGCGCGCGCAATGGCAAGGGCATCATCGAGAGCCTGCTGCAGCAGGT TCTCGGCTGCATGTTCTACCAGGCGCCGCAAAGCTTTCTGACGGCATGCA AGGCGGTGTCGGCGGGTGCCGCGTCATCGCACATGATGGCGCTACGTGGT GCACGCGTGGTCCACCTCGACGAGCTGCCGGCGGGTGTTGCGTTGGACGC GCAGATGATTAAGTACATCAGCGGCGGTGCCGACATCTCGGGGCGAGAGC TGTTTGGCACGCAGACGTCGTTTAGCCCAACCGCAGTTCCGTGGGCCAAC ACCAACGAGATGCCAATCATCAAGGCGGAGCCGGCGATATTGCAACGCAT TGAAATCATCCCCTGCGATGCAAAGTTTCGCACGCCCGGGGATGCCAAGT TCCCCTACGATGCCAATGATAAGACACACTTCATCAAGAACACCAAACTG CGCGAACACCTGCCCGTAGAGGCGTTCCTGGCGGTGGTGTGCAGGCGGCC AAGAGGTGGTACGAGGGTGGGCTGGGGGAGAAACCGGCTTGCTGCAAGCT GGCATGCGACGCTTTCGCCGCTGACAACGACACGCTACAAAGCTGGATTA ACGACGAGTGCGAGCTCGGATCCAGGGAGGGCGCCGATCCGGCACTCATC TTGTGTAGCAGCGCGTTCAGCGGTTACAACAATTACCGTGCGCGCCAGGA GCCAGCGCTACCGCCAATCAAGAAACGTGACATGCACGAGCAGATGGCGG CCAAGGGTTTTGCCAAGATAGATGACTACAGGAAGGCGCACAGCCAGTAC AATCTCAAATGCGTGTACGCCGGGCTCAAGTCTGCGGGCGGATACTAG
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Coding sequence (CDS) from alignment at Contig_301:4821..7868+

>mRNA_18770 ID=mRNA_18770|Name=jgi.p|Trimin1|354628|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2841bp|location=Sequence derived from alignment at Contig_301:4821..7868+ (Tribonema minus UTEX_B_3156 )
ATGGACATCGACGACTTTGACCTGCGAGCAGCGGAGAATGGCTTTATTGA
TGATGAGGAGCCCCCTGAAGAGCCGCCTATGCCGCTTGCCACCCCGCCGG
CTGCTGCACCAGCTGCTCCATGTGCACCCCCGGGCCGCCCCTCGCCCAAG
CGCAACACCAGCTACGCGAGGCAGAAGATGCAGCAGTACCGCGTGCCTTC
CGGCCAGGGCATCAAGGGGTCGCACAACGGCATGGATGACATGCGCGGAG
TGTTCGACGTGCCCAACTATGAGACTGATGCCGATGTGCGCGAGACCTTC
TTCACCGACATCATTGAGGACCTGCACCGCTGCGGCTCGCCCTTTGTGCT
GATGGAGAACATCTGCAGGCTACCGGAAGATGCAGAGACGCGCCTGCGTT
TCGACATTGACGTGGAAGTACCTTATAACGCCGACCATCCACTTGCCCTC
ACCGCCGCCGTCGCCCACAAGTTCTGCAAGACGCTGTGGGACGTGTTGCA
CGAGTGCACCGGCATCAGCGGCGCCTCGCGCTTCTTCGTAGACGCCAAGG
GCGCGCCCACGCCGACAGTTGCAGGCATGTGGAAGCACGGCTTGAAGATT
ACGTGCAGCGACATCAAGTGCACACACAAGGACATGCTGGGCGTTAGGCA
GCTCATGAACGACCGCTACAGCGCGTGGGGGCACGAGGAGTGGCTGGACG
GCAAGGAGGCGCACGAGATGCAGATCATCGACCCGTGCATCTACGAGAAC
AACGGCACTATGCTGCACGGCGCGGTCAAGGAGAAACAGCAGCAGCACGG
CGGCTACAGCACGGTGGCAGTGATGGGCGGTGACGACCTTCAGTACTACA
GCGGGGGCGACTTGCACGACCTCTCCTTCGCTGAGCTGCTGCGCGCCAAA
TCCATCCTGCACCATGACGAGAGCACCGCGAAACTGCAATGGCGCGCGGG
CAAGGAGCCGGTCATTGTGCAGCGGCGTGGTGCCAAGCGCACGCGCCGCA
GTGCCGGCGCGGTAGCGCTGGCCGCTGCAGCGGAGCACTACACCAACAAA
CTCACCACTGCAGATGTGCAGCACATCTACGAGGCGGCAGGGGGGGAGCT
GCAGCTGCAGCAGATTGCCGGCATCAGGGCCGGCACCATCTCATGGCGGG
AGGTGAGCCCCGGCACTGATGCTAGGGTGTGCCTTGTGCCCAAATGTGCC
GGCAGTGGCCACAGCGACAACGCATTGCTTATCGAGTGCTATCACGGGCT
CAAGTACAAGTGCTGCTCCACCGGGAAGTGCTTGTACCTGGAGCGCTGGG
AGACCGAAGAGGACCTGCTCTTCGGTGGTGACAACGGGCTCGCCAGGCTG
TTTGCCAAGCTGCGCAGCCACGACGTCAAGAACATTGGCGGCGACGGCGA
CAAGGCGCGATTCATCATCTACTGCGAAAAGACGGCGCTGTGGAAGCCGC
GCTACAACAGTTTCGTGCGCTGCACCGAGATACCCAAGCTGGTGGCCGCC
TACGTCGATCCGCAACTACAGGATCTGGAGCCGCACCTGGAGGCGGCGCG
TGCCGCTGCTCGCACACGCAGTAGGGCAGAGGAAGAGGATGAGGAGGCGG
ACGAGGACCTAACAGTTTTGGAGGCCAAAGCGGCCTCCCTCTTTGCCATC
AAAGAGAGCATCAAGGGCACGAGCAAGCGCGAGGCCATCTTGAAGGACGT
ATTCAGCACCGTACGCGACGAGGATTTCGAAAAGCTACTCGACGTCAACA
AGGACATCTTCAGCTGCGAAAACGGCGTGGTGGAGCTGGCCACTGCCACG
CTTCGCCCACGCGTGCGGAAGGACATGCTGACCCGTGCCGTCAACATTGA
CTACAATGCTGACTCGCCGCGCATCCCCGAAGTTATGCAGCTTCTGACCG
ACATCACCCTCGCCGCGCCGAATCGCCTCAACCGCCCAGCGCTGCTGGAG
CGCCTGCTGCGCATACTGGGCTACTCCATCACGGGCCACGTGCGCGAGGA
GATCATTGTATTCCTTCTCGGCCGCAGCGCGCGCAATGGCAAGGGCATCA
TCGAGAGCCTGCTGCAGCAGGTTCTCGGCTGCATGTTCTACCAGGCGCCG
CAAAGCTTTCTGACGGCATGCAAGGCGGTGTCGGCGGGTGCCGCGTCATC
GCACATGATGGCGCTACGTGGTGCACGCGTGGTCCACCTCGACGAGCTGC
CGGCGGGTGTTGCGTTGGACGCGCAGATGATTAAGTACATCAGCGGCGGT
GCCGACATCTCGGGGCGAGAGCTGTTTGGCACGCAGACGTCGTTTAGCCC
AACCGCAGTTCCGTGGGCCAACACCAACGAGATGCCAATCATCAAGGCGG
AGCCGGCGATATTGCAACGCATTGAAATCATCCCCTGCGATGCAAAGTTT
CGCACGCCCGGGGATGCCAAGTTCCCCTACGATGCCAATGATAAGACACA
CTTCATCAAGAACACCAAACTGCGCGAACACCTGCCCGCGGCCAAGAGGT
GGTACGAGGGTGGGCTGGGGGAGAAACCGGCTTGCTGCAAGCTGGCATGC
GACGCTTTCGCCGCTGACAACGACACGCTACAAAGCTGGATTAACGACGA
GTGCGAGCTCGGATCCAGGGAGGGCGCCGATCCGGCACTCATCTTGTGTA
GCAGCGCGTTCAGCGGTTACAACAATTACCGTGCGCGCCAGGAGCCAGCG
CTACCGCCAATCAAGAAACGTGACATGCACGAGCAGATGGCGGCCAAGGG
TTTTGCCAAGATAGATGACTACAGGAAGGCGCACAGCCAGTACAATCTCA
AATGCGTGTACGCCGGGCTCAAGTCTGCGGGCGGATACTAG
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