mRNA_18670 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354598
Unique NamemRNA_18670
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|354598 vs. uniprot
Match: A0A835YXQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXQ1_9STRA)

HSP 1 Score: 785 bits (2028), Expect = 7.400e-287
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 1 
Query:    1 MPCDRFSKVWVRASAEDKGVIWRTLIKVLQRTPFLVSFSFLPVDKPPNTATASGLTPWRKGRGQIVDVPPXXXXXAPFDRLVYVNADGFSDLEVNGGILSDAYEAVQTMYPRLGELLLPLLVNKHTAFYKWEDDEKAQLSTIVLRLCELVHRKEDDTGPLAGILGPIHEAMYGGGAGANMLRCHMMYVRRHFHFLRQYGAAVQDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGGERDADDTITAMRSLAVTAAMVDGRPEAYAMMEQQAHEAESNIEAHAAHFVLSPAQADDAEDESTRFLRWLQQWSKPHGQQQDQDTPARAPCRSLRGCHRRRALLYRCGCAGPCVTGRGGVSLPRSTAAAARRVTGEVLYVSKHADRIQLPLTVY 1194
            MPCDRFSKVWVRASAEDKGVIWRTLIKVLQRTPFLVSFSFLPVDKPPNTATASGLTPWRKGRGQIVDVPPXXXXXAPFDRLVYVNADGFSDLEVNGGILSDAYEAVQTMYPRLGELLLPLLVNKHTAFYKWEDDEKAQLSTIVLRLCELVHRKEDDTGPLAGILGPIHEAMYGGGAGANMLRCHMMYVRRHFHFLRQYGAAVQDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGGERDADDTITAMRSLAVTAAMVDGRPEAYAMMEQQAHEAESNIEAHAAHFVLSPAQADDAEDESTRFLRWLQQWSKPHGQQQDQDTPARAPCRSLRGCHRRRALLYRCGCAGPCVTGRGGVSLPRSTAAAARRVTGEVLYVSKHADRIQLPLTVY
Sbjct:    1 MPCDRFSKVWVRASAEDKGVIWRTLIKVLQRTPFLVSFSFLPVDKPPNTATASGLTPWRKGRGQIVDVPPXXXXXAPFDRLVYVNADGFSDLEVNGGILSDAYEAVQTMYPRLGELLLPLLVNKHTAFYKWEDDEKAQLSTIVLRLCELVHRKEDDTGPLAGILGPIHEAMYGGGAGANMLRCHMMYVRRHFHFLRQYGAAVQDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGGERDADDTITAMRSLAVTAAMVDGRPEAYAMMEQQAHEAESNIEAHAAHFVLSPAQADDAEDESTRFLRWLQQWSKPHGQQQDQDTPARAPCRSLRGCHRRRALLYRCGCAGPCVTGRGGVSLPRSTAAAARRVTGEVLYVSKHADRIQLPLTVY 398
[Close]
BLAST of jgi.p|Trimin1|354598 vs. uniprot
Match: A0A835YUC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUC0_9STRA)

HSP 1 Score: 558 bits (1437), Expect = 4.930e-195
Identity = 290/324 (89.51%), Postives = 300/324 (92.59%), Query Frame = 1 
Query:    1 MPCDRFSKVWVRASAEDKGVIWRTLIKVLQRTPFLVSFSFL---PVDKPPNTATASGLTPWRKGRGQIVDVPPXXXXX--APFDRLVYVNADGFSDLEVNGGILSDAYEAVQTMYPRLGELLLPLLVNKHTAFYKWEDDEKAQLSTIVLRLCELVHRKEDDTGPLAGILGPIHEAMYGGGAGANMLRCHMMYVRRHFHFLRQYGAAVQDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGGERDADDTITAMRSLAVTAAMVDGRPEAYAMMEQQAHEAESNIEAHAAHFVLSPAQADDAEDESTRFLRWLQQWSK 957
            +PCDRFSKVW+RASAEDKGVIWRTLIKVLQRTPFLV + FL   P DKPP+TATASGLTPWRK RGQ VDVPPXXXXX  APFDRLVYVNA GF+D EVNGGILSDAYEAV TM PRL E L PLLVNKHTAF +WEDDEKAQLSTI+LRLCELVHRKED+TG LAGILG IHEAMYGGGAGA MLRCHMMYVRRHFHFLR YGAA QDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGG+RDADDTITAMRSLAVTAAMVDGRPEAYAMMEQQAHEAESNIEAHAAHFVLSPAQADDAED+STRF RWLQQWSK
Sbjct:  182 VPCDRFSKVWIRASAEDKGVIWRTLIKVLQRTPFLVGYRFLRLLPGDKPPDTATASGLTPWRKERGQTVDVPPXXXXXXXAPFDRLVYVNAHGFNDFEVNGGILSDAYEAVHTMSPRLREQLRPLLVNKHTAFDEWEDDEKAQLSTIILRLCELVHRKEDETGALAGILGRIHEAMYGGGAGAIMLRCHMMYVRRHFHFLRGYGAATQDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGGDRDADDTITAMRSLAVTAAMVDGRPEAYAMMEQQAHEAESNIEAHAAHFVLSPAQADDAEDQSTRFSRWLQQWSK 505
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BLAST of jgi.p|Trimin1|354598 vs. uniprot
Match: A0A835ZHQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ5_9STRA)

HSP 1 Score: 270 bits (689), Expect = 4.180e-80
Identity = 139/167 (83.23%), Postives = 146/167 (87.43%), Query Frame = 1 
Query:    1 MPCDRFSKVWVRASAEDKGVIWRTLIKVLQRTPFLVSFSFL---PVDKPPNTATASGLTPWRKGRGQIVDVPPXXXXXAPFDRLVYVNADGFSDLEVNGGILSDAYEAVQTMYPRLGELLLPLLVNKHTAFYKWEDDEKAQLSTIVLRLCELVHRKEDDTGPLAGIL 492
            MPCDRFSKVWVRASAEDKGVIWRTLIKVLQRTPFLV + FL   P DKPP+TATASG TPWRK RGQ VDVPPXXXXX PFDRLVYVNA GF+D EVNGGILSDAYEAV T+ PRLGE L PLLVNKHTAF +WE DEKAQLSTI+LRLCE VH KED+TG LAGIL
Sbjct:  103 MPCDRFSKVWVRASAEDKGVIWRTLIKVLQRTPFLVGYRFLRLLPGDKPPDTATASGFTPWRKERGQTVDVPPXXXXXGPFDRLVYVNAHGFNDFEVNGGILSDAYEAVHTLSPRLGEQLRPLLVNKHTAFDEWESDEKAQLSTIILRLCEFVHTKEDETGTLAGIL 269
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BLAST of jgi.p|Trimin1|354598 vs. uniprot
Match: A0A835YYJ8_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYJ8_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.030e-67
Identity = 132/229 (57.64%), Postives = 155/229 (67.69%), Query Frame = 1 
Query:  133 KPPNTATASGLTPWRKGRGQIVDVP-PXXXXXAPFDRLVYVNADGFSDLEVNGGILSDAYEAVQTMYPRLGELLLPLLVNKHTAFYKWEDDEKAQLSTIVLRLCELVHRKEDDTGPLAGILGPIHEAMYGGGAGANMLRCHMMYVRRHFHFLRQYGAAVQDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGGERDADDTITAMRSLAVTAAMVDGRPEAY 816
            +PP TA+  G TP RK RGQ VD P PXXXXX P DRL+ VN  GF+D EV+GG+LSDAYE VQ  +P L ELL PL+ NKHTAF +WE D+KAQL+TI+LRLC++V R +DD G LA  L  IHEAMY                        QY A V+D+ +L ELTLPTTCY GDENAQV  LK VLERVI+DIT G +  A + I AMRSLA+T AMV G PEA+
Sbjct:   48 QPPATASDPGCTPCRKERGQTVDTPQPXXXXXXPSDRLIDVNVHGFNDFEVSGGVLSDAYECVQPTHPSLEELLRPLVFNKHTAFDEWEGDDKAQLNTIILRLCKVVQRNKDDMGILAITLSRIHEAMYAEA---------------------QYDAVVKDVNKLCELTLPTTCYHGDENAQVHELKVVLERVIIDITAGCDPRAAEIIAAMRSLALTVAMVAGWPEAF 255
[Close]
BLAST of jgi.p|Trimin1|354598 vs. uniprot
Match: A0A836CLL3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL3_9STRA)

HSP 1 Score: 226 bits (576), Expect = 2.830e-67
Identity = 139/250 (55.60%), Postives = 166/250 (66.40%), Query Frame = 1 
Query:  139 PNTATASGLTPWRKGRGQIVDVPPXXXXXAPF-DRLVYVNADGFSDLEVNGGILSDAYEAVQTMYPRLGELLLPLLVNKHTAFYKWEDDEKAQLSTIVLRLCELVHRKEDDTGPLAGILGPIHEAMYGGGAGANMLRCHMMYVRRHFHFLRQYGAAVQDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGGERDADDTITAMRSLAVTAAMVDGRPEA-YAMMEQQAHEAESN-IEAHAAHF 879
            P TA+ +G TP RK RGQ VD PPXXXXX    DRL+ VN  GF+D EV+GG+LSDAYE VQ M+P   ELL PL++NKHTAF +WE D+KAQL TI+LRLC++V R +DD G LA  L  IH+AMY                        QY   V+D+++L ELTLPTTCY GDENAQV  LK VLERVI+DIT G +  A + I AMRSLA+T AMV G PEA  AM+EQ+  E   N +EA AA F
Sbjct:   75 PATASDTGCTPCRKERGQTVDTPPXXXXXXXXXDRLINVNVHGFNDFEVSGGVLSDAYECVQPMHPSPEELLRPLVLNKHTAFDEWEGDDKAQLKTIILRLCKVVQRNKDDMGILAITLSRIHDAMYAEA---------------------QYDPLVKDVSQLCELTLPTTCYHGDENAQVHELKVVLERVIIDITAGCDPRAAEIIAAMRSLALTVAMVAGWPEAPQAMIEQEERELRCNSLEAQAAQF 303
[Close]
BLAST of jgi.p|Trimin1|354598 vs. uniprot
Match: A0A836CBD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBD2_9STRA)

HSP 1 Score: 195 bits (495), Expect = 2.470e-52
Identity = 141/397 (35.52%), Postives = 185/397 (46.60%), Query Frame = 1 
Query:   10 DRFSKVWVRASAEDKGVIWRTLIKVLQRTPFLVSFSFLPVDKPPNTATASGLTPWRKGRGQIVDVPPXXXXXAPFDRLVYVNADGFSDLEVNGGILSDAYEAVQTMYPRLGELLLPLLVNKHTAFYK-----------------------------------------------------------------------WEDDEKAQLSTIVLRLCELVHRKEDDTGPLAGILGPIHEAMYGGGAGANMLRCHMMYVRRHFHFLRQYGAAVQDIAELREL---------------TLPT------------TCYPGDENA--QVRALKAVLERVIVDITVGGERDADDTITAMRSLAVTAAMVDGRPEAYAMMEQQAHEAE-SNIEAHAAHFVLSPAQ 897
            + +SKVWVR SA+D+ V+WRT+IKVL + P LV F F   D     A  +G TPWRK +G+I+  PP      PFDRL YVN   F     +GG+LSDAYE     +P L ELL PL+ N+ + +                                                                         W D++K QL   +  +C +V++  DDT  L   L  IH+AMYG   G  MLR H+MY+R+ FHFLR+YGAA +D+ ELR L               T  T            T   GD++   Q+RAL  VL RV +D+T GG   A  TI  MRSL  TA M  G P+AY+ + QQ  EA+ ++  A AA +VLS  Q
Sbjct:  105 NHWSKVWVRVSAQDRNVMWRTIIKVLLQIPLLVGFRFRAPDDLSPDAYQAGTTPWRKTKGEIIPPPPSVQTPPPFDRLFYVNPLPFFPDGEHGGLLSDAYEHAYLAHPALEELLRPLVQNERSNWSNNWRYGEEESAAEAAEAAVEEESCEKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEQEARMIEEDNATWSDEDKEQLCAAINEMCVIVYKGGDDTKGLERTLFRIHDAMYGAD-GLRMLRGHVMYMRKEFHFLRRYGAAEEDLVELRRLIQRLLAPDADASGSDTADTAVRELADGLDRVTIDDGDDDVDNQMRALVGVLYRVEMDLTAGGHAHASHTIEMMRSLRSTATMAIGFPDAYSALVQQDLEAQHTSTAARAAQYVLSAEQ 500
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BLAST of jgi.p|Trimin1|354598 vs. uniprot
Match: A0A836CDP0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDP0_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.590e-48
Identity = 122/258 (47.29%), Postives = 147/258 (56.98%), Query Frame = 1 
Query:   61 IWRTLIKVLQRTPFLVSFSFLPVDK-----PPNTATASGLTPWRKGRGQIVDVPPXXXXX-APFDRLVYVNADGFSDLEVNGGILSDAYEAVQTMYPRLGELLLPLLVNKHTAFYKWEDDEKAQLSTIVLRLCELVHRKEDDTGPLAGILGPIHEAMYGGGAGANMLRCHMMYVRRHFHFLRQYGAAVQDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGGERDADDTITAMRSLAVTAAMVDGRPEAY 816
            +W  LI   +R    +SF+  P D+     PP TA   G TP RK RGQ VD PPXXXXX AP DRL+ VN  GF+D EV+GG+ SDAYE VQ  +P   ELL PL++NKHTAF +WE D+KAQL+TI+LRLC++V R +DD G LA  L  IH                                     A+L           GDENAQV  LK VLERVI+DIT G +  A + I AMRSLA+T AMV G PEA+
Sbjct:   23 VWSQLI---ERGAAQLSFT-RPCDRFSTVQPPATAIDPGCTPCRKERGQTVDTPPXXXXXXAPSDRLIDVNVHGFNDFEVSGGVSSDAYECVQPTHPSPEELLRPLVLNKHTAFDEWEGDDKAQLNTIILRLCKVVQRNKDDMGILAITLSRIHAE-----------------------------------AQLNH---------GDENAQVHELKVVLERVIIDITAGCDPCAAEIIAAMRSLALTVAMVAGWPEAF 232
[Close]
BLAST of jgi.p|Trimin1|354598 vs. uniprot
Match: A0A836CFH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFH4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 8.110e-33
Identity = 74/143 (51.75%), Postives = 89/143 (62.24%), Query Frame = 1 
Query:  385 YKWEDDEKAQLSTIVLRLCELVHRKEDDTGPLAGILGPIHEAMYGGGAGANMLRCHMMYVRRHFHFLRQYGAAVQDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGGERDADDTITAMRSLAVTAAMVDGRPEA 813
            ++WE D+KAQL+TI+LRLC++V R +DD G LA  L  IHEAMY                        QY   V+D+ +L ELTLPTTCY GDENAQV  LK V ERVI+DIT G +  A + I AMRSL +T AMV G PEA
Sbjct:   44 FEWEGDDKAQLNTIILRLCKVVQRNKDDMGILAITLSRIHEAMYAEA---------------------QYDPVVKDVNKLSELTLPTTCYHGDENAQVHELKVVFERVIIDITAGCDPRAAEIIAAMRSLELTVAMVAGWPEA 165
[Close]
BLAST of jgi.p|Trimin1|354598 vs. uniprot
Match: A0A835YRI4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRI4_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.550e-20
Identity = 49/75 (65.33%), Postives = 57/75 (76.00%), Query Frame = 1 
Query:  589 QYGAAVQDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGGERDADDTITAMRSLAVTAAMVDGRPEA 813
            QY   V+D+ +L ELTLPTTCY GDENAQV  LK V+ERVI+DIT G +  A +TI AMRSLA+T AMV G PEA
Sbjct:    6 QYDPGVKDVNKLCELTLPTTCYHGDENAQVHELKVVIERVIIDITAGCDPRAAETIAAMRSLALTVAMVAGWPEA 80
[Close]
BLAST of jgi.p|Trimin1|354598 vs. uniprot
Match: A0A836CJM1_9STRA (Pkinase_fungal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJM1_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 7.670e-17
Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 1 
Query:  589 QYGAAVQDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGGERDADDTITAMRSLAVTAAMVDGRPEAY 816
            +Y   V+D+ +L ELTLPTTCY GDENAQV  LK V+ERVI+DIT G +  A +TI AMRSLA+T AMV G PEA+
Sbjct:  629 EYDPVVKDVNKLCELTLPTTCYHGDENAQVHELKVVIERVIIDITAGCDPRAAETIAAMRSLALTVAMVAGWPEAF 704
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354598 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835YXQ1_9STRA7.400e-287100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUC0_9STRA4.930e-19589.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHQ5_9STRA4.180e-8083.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYJ8_9STRA1.030e-6757.64Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CLL3_9STRA2.830e-6755.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBD2_9STRA2.470e-5235.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDP0_9STRA1.590e-4847.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CFH4_9STRA8.110e-3351.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YRI4_9STRA4.550e-2065.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJM1_9STRA7.670e-1763.16Pkinase_fungal domain-containing protein n=1 Tax=T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_285contigContig_285:46058..52730 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354598|estExt_Genemark1.C_Ctg_2850006
Hectar predicted targeting categoryother localisation
TranscriptId354920
TrackFilteredModels1
ProteinId354598
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354598gene_18670Tribonema minus UTEX_B_3156 geneContig_285 46058..52730 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354598Trimin1|354598|estExt_Genemark1.C_Ctg_2850006Tribonema minus UTEX_B_3156 polypeptideContig_285 46058..52730 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18670_5exon_18670_5Tribonema minus UTEX_B_3156 exonContig_285 46058..46100 -
exon_18670_4exon_18670_4Tribonema minus UTEX_B_3156 exonContig_285 46441..46511 -
exon_18670_3exon_18670_3Tribonema minus UTEX_B_3156 exonContig_285 46644..46770 -
exon_18670_2exon_18670_2Tribonema minus UTEX_B_3156 exonContig_285 51292..51350 -
exon_18670_1exon_18670_1Tribonema minus UTEX_B_3156 exonContig_285 51834..52730 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18670CDS_18670Tribonema minus UTEX_B_3156 CDSContig_285 51834..52730 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18670 ID=mRNA_18670|Name=jgi.p|Trimin1|354598|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1197bp|location=Sequence derived from alignment at Contig_285:46058..52730- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCTGCGATCGCTTCAGCAAAGTGTGGGTTCGTGCTTCAGCGGAGGA
TAAAGGTGTCATCTGGCGCACGCTCATCAAGGTTCTGCAGCGGACTCCTT
TTCTGGTCAGCTTCAGCTTCCTGCCTGTCGACAAGCCGCCCAATACAGCT
ACCGCCTCAGGCCTCACACCTTGGAGGAAGGGAAGGGGCCAGATTGTGGA
CGTACCACCACCACCACCACCACCGGCCCCGTTCGACAGACTCGTTTACG
TGAACGCGGACGGATTCAGTGACTTAGAGGTAAATGGCGGAATCTTGTCG
GATGCGTACGAAGCGGTTCAAACCATGTACCCTCGCCTGGGGGAACTGCT
CCTTCCACTCCTGGTCAACAAGCATACAGCGTTTTACAAGTGGGAGGATG
ACGAGAAGGCGCAGCTGAGCACCATCGTACTCCGCCTGTGTGAGCTCGTG
CACAGGAAGGAAGACGATACGGGCCCCCTGGCGGGCATCCTCGGTCCCAT
TCACGAAGCCATGTACGGCGGAGGCGCAGGTGCGAACATGCTGCGTTGCC
ACATGATGTACGTGCGACGGCATTTCCACTTTCTGCGGCAGTACGGAGCG
GCTGTGCAGGACATCGCTGAGTTGCGCGAGCTCACACTGCCCACCACCTG
CTACCCTGGAGACGAGAACGCACAGGTACGCGCGCTCAAGGCCGTGCTCG
AGCGGGTGATTGTTGACATCACCGTCGGGGGCGAACGTGATGCCGACGAC
ACCATCACGGCGATGCGCAGTCTTGCAGTCACCGCGGCGATGGTCGACGG
TAGGCCAGAGGCGTATGCAATGATGGAGCAGCAGGCACACGAGGCCGAGA
GCAATATCGAAGCGCACGCTGCCCACTTTGTGCTATCTCCGGCTCAGGCC
GACGACGCTGAGGATGAGAGCACACGGTTCTTGCGGTGGTTGCAGCAGTG
GAGCAAGCCGCACGGGCAGCAGCAGGACCAGGACACGCCAGCGCGCGCGC
CGTGCCGCAGCCTGCGTGGGTGCCACCGTCGTAGAGCGCTGCTGTACCGC
TGCGGCTGCGCGGGCCCGTGCGTCACAGGCAGAGGCGGGGTGTCGCTGCC
ACGCAGCACTGCTGCGGCTGCGCGGCGCGTCACGGGTGAAGTGCTGTACG
TGAGCAAGCACGCAGATCGCATCCAGCTGCCGCTTACAGTCTATTAA
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protein sequence of jgi.p|Trimin1|354598

>Trimin1|354598|estExt_Genemark1.C_Ctg_2850006 ID=Trimin1|354598|estExt_Genemark1.C_Ctg_2850006|Name=jgi.p|Trimin1|354598|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=399bp
MPCDRFSKVWVRASAEDKGVIWRTLIKVLQRTPFLVSFSFLPVDKPPNTA
TASGLTPWRKGRGQIVDVPPPPPPPAPFDRLVYVNADGFSDLEVNGGILS
DAYEAVQTMYPRLGELLLPLLVNKHTAFYKWEDDEKAQLSTIVLRLCELV
HRKEDDTGPLAGILGPIHEAMYGGGAGANMLRCHMMYVRRHFHFLRQYGA
AVQDIAELRELTLPTTCYPGDENAQVRALKAVLERVIVDITVGGERDADD
TITAMRSLAVTAAMVDGRPEAYAMMEQQAHEAESNIEAHAAHFVLSPAQA
DDAEDESTRFLRWLQQWSKPHGQQQDQDTPARAPCRSLRGCHRRRALLYR
CGCAGPCVTGRGGVSLPRSTAAAARRVTGEVLYVSKHADRIQLPLTVY*
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mRNA from alignment at Contig_285:46058..52730-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18670 ID=mRNA_18670|Name=jgi.p|Trimin1|354598|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6673bp|location=Sequence derived from alignment at Contig_285:46058..52730- (Tribonema minus UTEX_B_3156 )
ATGCCCTGCGATCGCTTCAGCAAAGTGTGGGTTCGTGCTTCAGCGGAGGA
TAAAGGTGTCATCTGGCGCACGCTCATCAAGGTTCTGCAGCGGACTCCTT
TTCTGGTCAGCTTCAGCTTCCTGCCTGTCGACAAGCCGCCCAATACAGCT
ACCGCCTCAGGCCTCACACCTTGGAGGAAGGGAAGGGGCCAGATTGTGGA
CGTACCACCACCACCACCACCACCGGCCCCGTTCGACAGACTCGTTTACG
TGAACGCGGACGGATTCAGTGACTTAGAGGTAAATGGCGGAATCTTGTCG
GATGCGTACGAAGCGGTTCAAACCATGTACCCTCGCCTGGGGGAACTGCT
CCTTCCACTCCTGGTCAACAAGCATACAGCGTTTTACAAGTGGGAGGATG
ACGAGAAGGCGCAGCTGAGCACCATCGTACTCCGCCTGTGTGAGCTCGTG
CACAGGAAGGAAGACGATACGGGCCCCCTGGCGGGCATCCTCGGTCCCAT
TCACGAAGCCATGTACGGCGGAGGCGCAGGTGCGAACATGCTGCGTTGCC
ACATGATGTACGTGCGACGGCATTTCCACTTTCTGCGGCAGTACGGAGCG
GCTGTGCAGGACATCGCTGAGTTGCGCGAGCTCACACTGCCCACCACCTG
CTACCCTGGAGACGAGAACGCACAGGTACGCGCGCTCAAGGCCGTGCTCG
AGCGGGTGATTGTTGACATCACCGTCGGGGGCGAACGTGATGCCGACGAC
ACCATCACGGCGATGCGCAGTCTTGCAGTCACCGCGGCGATGGTCGACGG
TAGGCCAGAGGCGTATGCAATGATGGAGCAGCAGGCACACGAGGCCGAGA
GCAATATCGAAGCGCACGCTGCCCACTTTGTGCTATCTCCGGCTCAGGTC
TTTGCGTTCATGTTGTCCACAGTCAGCGACTTCAATGCTAGCAACACTAT
GCAGGCATTCCTGTTCCCTCTTGGTTCAGAGTCGTGCAGTGATGAGCTGG
TGCAGACCGCAAAGGCGGCCAGCACTTGTTTCATTCCTTTCACAAACGGG
ACGTTTTGGTGTCTGTACCGAGTTTCACAAAGTTCAGGATCCCAGTTCTG
GTTTGTCGGCTACAAGCAGGATGAGCAGTGGCACTCACAGACGCTGGCGG
TTGTGTCGACATTTGTGAGACGCATGTGGGGCGGCTCTGCTCAGAGGAAC
TGGAGAGTGTACAGTGATTGCACGGATACTACGCCATATGTCTTTACTGA
TTGTACGGGGTTGAGCATGTGTCTAGATATTGCTAACTGCCTTGCTCCTG
ATGTGGCACGGTCGTTTCGCCACCCATACGCTGTGCAGGGCGTGGTTCTC
AGTAGGGCAGAACTTCTTCGTGAAACGCAGGCCGACGACGCTGAGGATGA
GAGCACACGGTTCTTGCGGTGGTTGCAGCAGTGGAGCAAGTACGTTCTTG
AAAAGATTGCACGTGTGTCCGCATAAATGAGCACCGCGTGCATTGACATT
GTGGTGGTTTGGTTTTCATGGTTGCTTGTCTTGCGCTGCATCAGTGTGCG
TGTGTGGCCGCTGTTTCTGTTGCTCACATTGTTCTGCACCGGTTCGAGTA
GTCGGCAGCTGTCACACTGGCACTTTTGCCCACTTGCTGTAATTGCCAGT
ACTTGCCTGATTCTCTGGCGCCATGGTTCAGTTGCTTGTTTGCTGCACGC
ACGTCGGAACTGCTATTCCCGTTAGTCCGTGGATGCTGGCTCGTAACACG
GGTGATGGTGATCGATTGAAAGCACCCGCAGTAATTTACTTGGCTTTGCA
TGTGTCGTGCACTCCAGTCGCTCCATGACAGCAATGACCTTGGCAGATTC
CACCAAGAGAGCCAGGTTCTAAGCACACAAGTTGTATGTAGCAGGAGTGT
GACTGGTCACTTTAGAGTGTTCAACAAGTGAATCAGGTGCACAAAGTTCA
ATCGCTAAGGTAGGTCCAAGTTTCATGAGCTGGACAAGTTTATCTAGATG
CACATACGCATGCATCGCGAGGCATCAAGAAGTGATGCGTTCAAAGAGTC
ATGCCTTCAACTTGATTCTTGCCAACAGAGCCATGCATTTACACGGAGCA
CGGTCGCGTGCGTCCTGTCATATGACCTTGTACTCCTGAACCCGGCAGGC
AGTTAGTGATATTGTTCAACACATGTGTCAAGCATGAAACACCATACGAC
CACGCGCATCGTAGCTCACTGTACACATTCCCCGCCCATGTAGGCTTTAC
GCATCGCTTCTACAGTGTGGCTTTCAACGCTTGCAGTAAACGCCAACACC
AGTCAAATTCTGGAACCAAAATGGGGCACCCCCGTGCCAGAAGCTCGCCA
ACAGCCACAAAACTCACATCACACCAGCATGCTCTAAGTGCATGGCATGC
GTGTGCGCTGTCATTTCACCACCTTTCCAAGGCTAGTTGGTGGCAAGCCT
CAACTTTTGCTATGTGTGCATATACAGTTAAATTGAACAGACATTGCAAC
AGCCATATCCCATTCGTTGTCGGTGTTGTGCTATGCTAAGATGCGCCACG
ACCTTTCGAAGGACACAACACCCACATGCATCTCGCTACTCATATGGCCA
TGTCCACAAGTGCCTCAACATGAGCTACGACCACAAAGGAACACATAAAT
GTAATGATACGTTGCGCGCACCAAGCTCTCGCCAGTGCAGACATTCGTCG
CAGCATGCGCCAATCAATCATTAGCGCAGATCATAGCAAAACGCGCACAC
TAGCATACCTGGCCATCACCAACACTGTGCCTTGGGGTGCGCAGCAAGCA
CGATGACGCCATGTATGCAAGCCTGCACGTGTCGAGCGACCACAATGCCT
TGCCTCAACATTCGATGCCGCTCGCAAGCAGACATGGCAAATCTTGCATG
CAGTAAACATCCACAAGAACAATTGTCTCAATAGTGATGGACAACACGCA
AACACCTTGCACAGTGCAAAGTACGCACGCAGCATGCAAAAGGCAAAAAA
AGGAAGTGAGTGAGAGAGACAGGGGATGCTTGAGCGCTTCGATGTGTACA
AGCACTCATGAAGTTCTCGACAGACCACAGGTGAGGGAAGGGGTGGGGGT
CCTGGGCACTGTCTAGGAAGCACCGGGACCTGCGCAAAAGTTGCGCTCAG
CACGTGGGTCCCTGACCATGTCCCAGCTTTTGTTCCATTTGGGGAGGTGC
TTGGGGCGTGCCTGGGACGTGGTTTTGCGCAAAACATCCTAGAATGACCA
CCTCCCATCGCGTGGGGTCGTGGGTGTCGGGCGTGCACTGCAGTGGGTCA
GCGCAAGGGAGGGGCACGCATACAGTGTGACAGGAGCAGCAGCGCAAGGC
GAGGCGGCTACATGCAGCAGCATAGTAATGGAGGAAGCAACAGCATGCAC
GCGTAGCGCAGGCAAGGCGTGCTGCTGTCACACAGCCAAAAGCTCCACAG
CTTCCAACTTGTAGCATTATTTTGTCAGCCTGTAGCACGCTGTGCGCGCA
CGCCTATCGCTCTGGAAGCTCTCCCGCGACTGTACACGCAAATCACGCTA
CCGCGATGGTGCCACCACTCCGCTCCAGCTCTGCTCCAGTAAACAAGCAG
CTGTTTTAAGTTCGGCTCCCCTCCATTGCCGCATTGAACATGCGCATGGC
TTCAGCAGCACTTGGTCAGTGAAAAAGCATCCTGCCTGTGTCTCAGCAAG
TTGTCCAAGTATCAGCCTGCAAATCCACAAAAGCAGCACAGAGCAAGTAC
AAGTTGTACTTAATTTGTGAAAGGAGCCAACATCAAGTAGCCTTCGTGGA
CACCTTGTGATACAGAAGTAGGTTCACAATCATATGATGTCGACGGTGTA
CAATGTGGGGGCAATACACATTGTAAGTCATGAAAGCATGGCAAAAGACC
ATGAGCATAGATGCATGCATCAGTAAACAAGAAAAATACATACTGCAACT
CGTACTGTCGAGGTGGCCAACTAACATAAGGCGTGCTTTGTATTAATGGC
ATTGGCGTCAGGCGACAGCTGTTGCACTCACACGCTGTTACTGGCTACTC
CTCAAAACAGCTTCTGATACCGTAACCTTACTAACCTACGACGCAGGTGT
CGCAGGGCACTGCTGGCCATACAACTAAGAAAAACCCAGGTTCCTTCCTG
TCCAGTAGACTAGACTAGAGGCACCAGCACGCTTGTGTACACTGACGGCT
GGCGGCTGTCTTACGGAAGCTTGTTCCGCAGGAGCACTCTGCTGCGATCA
AAAACACCGCAAGTCTTTATGAATAATGCCAGTAAAATCATCGACACAGT
ACCTCAGAGCACGATCATCGCGAAATTGCACTACAAGTATGCTGTTCAAG
CAACACCAATACACTTCTGAAGTATCCGAAGTGGCAGTCGGCTTTTGTCT
CCCAAGCAGTAACTAATGTAAAGCCGCATAAAGTACAGCATAAGATATTC
TCACCTGACATCAATACACGATGTGCAGATCTGGGGCAGTCTGCTCCTGG
TAAAGTCCGTGCCTTCCCAGTCTTGCACCACCATGCTCAGTCGCCAGAAG
CTGCCAGGTGTGATTATGATTCCGCCACTGTGGTTGGTGTGTCCATCGCT
GAGCAAGTTGCATGAAGAGGGCAATGGGGGCATCAATTGGTGAATGCCTT
CCGGCACGCCATGCATGCATTTCGTCGCGCAACTGTGATATTGTGACAAA
AGTTCAGTGCGTGAACAAAATGTTACATTTCATGTGTGATATCCGCAATG
ATTTGGAGACAGATATGGCCTACTGCAACAATCAGCTCAGCTGATACAAC
TGGCAACAGCGGCTTTCGCCTCAAAGTAGGCAGGCTTGAAGAATGCAGAG
CATGTCAGGACTGGCATTCTGTCAAATATGGCACACGTAATTCGCATGGC
CTTACCTTTGAATCCAGTTGGAGGTCAGGTGTGTTTACTGCAGTGAAGCT
CTGAAGCTGTTGGACTTGTTAGTTTGTGAATGTGAACGGCAGTGCGTCTG
CAAGTTGCGCTCTGCAAGAGAACTGCAAACACACTACTCGCATGTATGTA
TGCTCTACAAAGCTAGCTTGCGATACAGTGTGCGGGCGCGCTACTGGCAG
GCCACAGCACATCACAACCGCCTCAAGAGCAGGTTCACCATGAATTGTAC
TAGTAAGTGTGACCAAGAAACTTGGAGTGCTTTCTCAGAAGCATGAAATA
ATGCTGCCCCCCTGTGAAGCTACGTAGAAATTTTGTGCTTGCTTTGACAG
CATACTTGAATGCATCATGCCAATGTATGTGTGTGCAATGCCTGGTGCTT
GCAGAACCCACATTTGAGAATCGTTGGATGACTAAAGCATTGTAGTATGC
ATGTGAATGTGCCGCATGTATGTGTATGTGTGTGCGCTCAGCGGCTGAAC
TGCAACCACCTGCAATTGTGAAGATCCCAAGTATCTTGAAAATGATTCAG
ACCTGCAATTGTCAAGAGCAGAGTAGTAATTCAGATGCAAAGTTGCATCT
GGAAGCAAGACAACTCTCACCCCCTGGTTACCTAGTTTGTGTCTCATACA
TGTATACCAAAACCATTGCCTTTCAGGTACTGTAAGAACCAGCCGACACG
CCAAGTACATGGTACGACCATACTACCGCTCCTGCTTTCTCAGCACACCC
ATTGCACGACATACACGTCAGCACAATGCTGGGACAAGGAAAACAGACAT
TTGCGGTGAAAAAGTGGACCCAACCCTGCGCTCCCTCTTCATCCCCCCAA
GACCTTCTGTAAACGCACACTCGCAAGTAAAGAACGTCCAGGCGGCACAC
TCACCCCGCCGCGCGTGCACTTGAAGTGCGCGCCCTCTATCCCCTCACCG
CCGCCGTACTTCGCCTCCCCCGCTGCTGCTGCTGCGGCCGTGCCCTCCCC
CCTCCCCCGCCGCCCCCCCCACACCCCACTGTTGTAGTCCTCGCCGCTGC
TCGCGCTGAGGCCGCACGGGCAGCAGCAGGACCAGGACACGCCAGCGCGC
GCGCCGTGCCGCAGCCTGCGTGGGTGCCACCGTCGTAGAGCGCTGCTGTA
CCGCTGCGGCTGCGCGGGCCCGTGCGTCACAGGCAGAGTACGGTAAATGT
GAGGCTTGTGTGACAATTGGGGTGTAACTGCCGTGGAGCGCTGGCGCGCC
GCTGCCGCTGCGCGAGCGTGTGTGGCACAGGTGAAGTAAATGTTAGTGAG
GTGCGTGCGCGCAATGCAGGGCGGGGTGTCGCTGCCACGCAGCACTGCTG
CGGCTGCGCGGCGCGTCACGGGTGAAGTGCTGTACGTGAGGTGCGTGTGG
GTGACGCAGTGCGAGGGTGTCATTGCCGCATAGTGCTGCTGCGGCTGCGC
GGCGCATTGCAGTTACAGTACTGTGAGTAAGGTGCATGACGCAGGCAGCG
CGGGGCTCACTGCCACGGGGCACTGCTGCGTGAGGACGCACATGGCAAGT
CACAGAAGGCTTTTTACTGTTGCATGGCACAGCGCGGACAGATGGAAGTA
CGTGGGTGCATGGCGCAGCCGGAGGTCACCGCCATGAAGCAGCCGCTGCG
CAAGTGGGCACGTGACAAGCACTACGCCGTCGCGGCTCCACCCCTGGACG
TTGTGTACATATCCCACCGCCCCGCCGCAGCAAGCACGCAGATCGCATCC
AGCTGCCGCTTACAGTCTATTAA
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Coding sequence (CDS) from alignment at Contig_285:46058..52730-

>mRNA_18670 ID=mRNA_18670|Name=jgi.p|Trimin1|354598|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1197bp|location=Sequence derived from alignment at Contig_285:46058..52730- (Tribonema minus UTEX_B_3156 )
ATGCCCTGCGATCGCTTCAGCAAAGTGTGGGTTCGTGCTTCAGCGGAGGA
TAAAGGTGTCATCTGGCGCACGCTCATCAAGGTTCTGCAGCGGACTCCTT
TTCTGGTCAGCTTCAGCTTCCTGCCTGTCGACAAGCCGCCCAATACAGCT
ACCGCCTCAGGCCTCACACCTTGGAGGAAGGGAAGGGGCCAGATTGTGGA
CGTACCACCACCACCACCACCACCGGCCCCGTTCGACAGACTCGTTTACG
TGAACGCGGACGGATTCAGTGACTTAGAGGTAAATGGCGGAATCTTGTCG
GATGCGTACGAAGCGGTTCAAACCATGTACCCTCGCCTGGGGGAACTGCT
CCTTCCACTCCTGGTCAACAAGCATACAGCGTTTTACAAGTGGGAGGATG
ACGAGAAGGCGCAGCTGAGCACCATCGTACTCCGCCTGTGTGAGCTCGTG
CACAGGAAGGAAGACGATACGGGCCCCCTGGCGGGCATCCTCGGTCCCAT
TCACGAAGCCATGTACGGCGGAGGCGCAGGTGCGAACATGCTGCGTTGCC
ACATGATGTACGTGCGACGGCATTTCCACTTTCTGCGGCAGTACGGAGCG
GCTGTGCAGGACATCGCTGAGTTGCGCGAGCTCACACTGCCCACCACCTG
CTACCCTGGAGACGAGAACGCACAGGTACGCGCGCTCAAGGCCGTGCTCG
AGCGGGTGATTGTTGACATCACCGTCGGGGGCGAACGTGATGCCGACGAC
ACCATCACGGCGATGCGCAGTCTTGCAGTCACCGCGGCGATGGTCGACGG
TAGGCCAGAGGCGTATGCAATGATGGAGCAGCAGGCACACGAGGCCGAGA
GCAATATCGAAGCGCACGCTGCCCACTTTGTGCTATCTCCGGCTCAGGCC
GACGACGCTGAGGATGAGAGCACACGGTTCTTGCGGTGGTTGCAGCAGTG
GAGCAAGCCGCACGGGCAGCAGCAGGACCAGGACACGCCAGCGCGCGCGC
CGTGCCGCAGCCTGCGTGGGTGCCACCGTCGTAGAGCGCTGCTGTACCGC
TGCGGCTGCGCGGGCCCGTGCGTCACAGGCAGAGGCGGGGTGTCGCTGCC
ACGCAGCACTGCTGCGGCTGCGCGGCGCGTCACGGGTGAAGTGCTGTACG
TGAGCAAGCACGCAGATCGCATCCAGCTGCCGCTTACAGTCTATTAA
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