mRNA_18567 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|181411
Unique NamemRNA_18567
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|181411 vs. uniprot
Match: A0A835YYY4_9STRA (Glycosyl hydrolase catalytic core-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYY4_9STRA)

HSP 1 Score: 690 bits (1780), Expect = 5.060e-251
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 1
Query:    1 MFDGLPPTQESHRGESRTLAANCTKSKKRGVSIDPRSSGDYFAREGSLLATGVRWYNNWNVTSQNATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTKKGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRIDLVSATFNDTRVIISEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLEKYAVSPASSSLFSRKNKLSALGLEYTKCVPKPQPATPPPTSAPTVVATQNPQADAILPSASEPSGSILFQHPREVQCLLDLRC 1020
            MFDGLPPTQESHRGESRTLAANCTKSKKRGVSIDPRSSGDYFAREGSLLATGVRWYNNWNVTSQNATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTKKGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRIDLVSATFNDTRVIISEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLEKYAVSPASSSLFSRKNKLSALGLEYTKCVPKPQPATPPPTSAPTVVATQNPQADAILPSASEPSGSILFQHPREVQCLLDLRC
Sbjct:    1 MFDGLPPTQESHRGESRTLAANCTKSKKRGVSIDPRSSGDYFAREGSLLATGVRWYNNWNVTSQNATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTKKGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRIDLVSATFNDTRVIISEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLEKYAVSPASSSLFSRKNKLSALGLEYTKCVPKPQPATPPPTSAPTVVATQNPQADAILPSASEPSGSILFQHPREVQCLLDLRC 340          
BLAST of jgi.p|Trimin1|181411 vs. uniprot
Match: A0A836CG22_9STRA (Glyco_hydro_cc domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG22_9STRA)

HSP 1 Score: 397 bits (1021), Expect = 6.240e-137
Identity = 191/244 (78.28%), Postives = 209/244 (85.66%), Query Frame = 1
Query:   67 CTKSKKRGVSIDPRSSGDYFAREGSLLATGVRWYNNWNVTSQNATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTKKGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRIDLVSATFNDTRVIISEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLEKYAVSPASS 798
            CTKSKKRGVSIDPR SG Y ARE  LLA G RWYNNWNVTS + TAF RLAFMPMVWSRYGA HW+QAI+  P  GG GSI+LGFNEPN   Q+NMTPQ+AA+ WG VL RAK+L FKLASPSPTKKGYPAALLSGI WLQQFFAEAD+ Y TTNAGVHYINMH+YDC++A+V DRID +S  F+   +I+SEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGL+KYA  PASS
Sbjct:    2 CTKSKKRGVSIDPRISGAYSAREVGLLAKGARWYNNWNVTSNDPTAFRRLAFMPMVWSRYGADHWMQAIKQTPLKGGAGSIILGFNEPNSHSQSNMTPQLAAAEWGAVLARAKQLRFKLASPSPTKKGYPAALLSGIEWLQQFFAEADRAYGTTNAGVHYINMHTYDCDVASVSDRIDCLSTAFDGLPIIVSEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLDKYAALPASS 245          
BLAST of jgi.p|Trimin1|181411 vs. uniprot
Match: UPI001E1D7362 (uncharacterized protein LOC123535364 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D7362)

HSP 1 Score: 97.4 bits (241), Expect = 5.200e-19
Identity = 80/270 (29.63%), Postives = 127/270 (47.04%), Query Frame = 1
Query:   76 SKKRGV--SIDPRSSGDYFAREGSL----LATGVRWYNNWNVTSQNATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTKKGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRIDLVSATFNDTRVIISEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLEKYA------VSPASSSLFSRKNKLSALGLEYT 849
            S+KRG+   ++    GD+    G +        + ++ N +  S +    + L ++PMVW      H    IQ   T        LGFNEPN   QAN+T + AA+ W  +   A  +  KL SPS ++ G P+ + S   W   FF+E        N  + +I  H+Y C+   V   ++ +  T+N T V ++E  C   +   +  +M+ FM+Q++P+LEA   V  YSW+ G    +      V+PA+S L      L+ LG  YT
Sbjct:   21 SEKRGLVHRLEEYKCGDFDTLSGIVWWYDYRNNISYFLNHDDCSTSLDYNTTLGYVPMVWGAQDNPH----IQSDST------YCLGFNEPNHPNQANLTSEAAAAGWRELEAAANGI--KLVSPSASECGGPSCIDSTKGWFDGFFSEC------ANCTIDFIATHTYMCDAGKVMSILEDLYTTYNKT-VWLTEFACGKIE---HPELMLIFMKQILPLLEAADYVYRYSWYKGRIPDSNNGTAYVTPAASLLEPNGTNLTTLGEFYT 268          
BLAST of jgi.p|Trimin1|181411 vs. uniprot
Match: UPI001EE60FD5 (alkali-sensitive linkage protein 1-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE60FD5)

HSP 1 Score: 90.9 bits (224), Expect = 2.050e-17
Identity = 73/271 (26.94%), Postives = 124/271 (45.76%), Query Frame = 1
Query:   52 TLAANCTKSKKRGVSIDPRSSGDYFAREGSLLATGVRWYNNW--NVTSQNATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTKKGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRIDLVSATFNDTRVIISEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLEKYA----VSPASSSLFSRKNKLSALGLEY 846
            +L      S K+GV I  +     F  E  L    V W+ +W    T Q+    ++   +PM+W       W Q +  P         +LGFNEPN  +QAN++PQ+AA  W  +++RA +    ++  +    G P     GI W ++FF             V YI  H+Y C+  T  + +  +   F+  ++ ++E  C +     +    +++M+ ++P LEA   V+ Y+WF    ++A    V+ ASS L    + L++LG  Y
Sbjct:   20 SLVVGACGSAKKGVGIPSQG----FRCEDLLAFPNVHWWYDWFEQPTYQHNCKQNKAGRVPMIWG------WRQNVDFPLHIPSNAHYILGFNEPNFSIQANLSPQLAADHWR-LIERAGQGKLLVSPAAAPCSGNPICNYDGIQWFEEFFRHC------AGCKVDYIATHAYWCSADTTMNYLQTLYNKFHK-KIWLTEFACPSHNSVQD---QLNYMKAILPRLEAASYVSRYAWF--ASRWAGDSFVTQASSLLDQSTSTLTSLGKYY 267          
BLAST of jgi.p|Trimin1|181411 vs. uniprot
Match: A0A371DJ08_9APHY (Glyco_hydro_cc domain-containing protein n=2 Tax=Polyporus TaxID=5637 RepID=A0A371DJ08_9APHY)

HSP 1 Score: 88.2 bits (217), Expect = 1.560e-16
Identity = 66/244 (27.05%), Postives = 110/244 (45.08%), Query Frame = 1
Query:  136 GSLLATG-VRWYNNWNVTSQNATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTKKGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRIDLVSATFNDTRVIISEVGCAAAKLAG----NATMMMDFMQQVVPMLEAHPRVAYYSWFNGLEKYAVSPASS--SLFSRKNKLSALGLEY 846
            G  L TG V+WY  + +++ + +A     F+P+++    A  W   I+      G   +L GFNEPN + QAN++PQ AA++W   +   K     L SP+P   G      +G+ WLQQF          +   V +I +H YD + ++ K  I      F    + ++E  C      G    +A+    FM+ +    ++   +  Y+WF       V P +S   L     +++ALG +Y
Sbjct:   35 GQFLTTGKVKWYYTYGISTVSTSA----EFVPLLFGPSQAAQWDSNIKSVIKNHGVKHVL-GFNEPNEEGQANLSPQAAAALWKQHIQPLKAQGVLLGSPAPGPSG------NGVQWLQQFIQAC------SGCNVDFIAVHQYDTSTSSFKAAIQQYHNAFPGKPIWVTEWACEDFNSGGKGPCSASAASSFMKTIQAFFDSQSYIERYAWFG------VFPNTSPIDLVDSSGRINALGKQY 255          
BLAST of jgi.p|Trimin1|181411 vs. uniprot
Match: A8N3V1_COPC7 (Glycosyl hydrolase 53 domain-containing protein n=1 Tax=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) TaxID=240176 RepID=A8N3V1_COPC7)

HSP 1 Score: 81.6 bits (200), Expect = 1.590e-13
Identity = 58/229 (25.33%), Postives = 103/229 (44.98%), Query Frame = 1
Query:   73 KSKKRGVSIDPRSSGDYFAREGSLLATGVRWYNNWNVTSQNATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTKKGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRIDLVSATFNDTRVIISEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWF 759
            K+ KRG++    S         +  A+ + W  NW        A S + F+PM W      +++ A++          ++LGFNEP+   +ANM P+ AAS+W   ++  K+   +L  P+ T  G      +G  WL++FF E  +L  T    + ++ +H Y   I    D +  +   F +  + ++E     A ++ N   + +FM   +  L+    V  Y+WF
Sbjct:  109 KNPKRGLAF-AASKSPMDIHNANQTASLISWQYNWANIPPAYLATSNIPFVPMQWGSGAIDNFVDAVRAQGA-----EVVLGFNEPDYDREANMDPEQAASLWMSYIEPLKQHGVRLGGPAVTSAG------TGRPWLRRFFRECSRLQCT----IDFLPVHWYGFGITGFYDYLWSIHNEFPEYPIWVTEY----ADISSNDAEVYNFMNASIHYLDELEWVERYAWF 317          
BLAST of jgi.p|Trimin1|181411 vs. uniprot
Match: A0A1S3H8E1_LINUN (uncharacterized protein LOC106153037 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H8E1_LINUN)

HSP 1 Score: 78.2 bits (191), Expect = 6.900e-13
Identity = 60/220 (27.27%), Postives = 100/220 (45.45%), Query Frame = 1
Query:  118 DYFAREGSLLATGVRWYNNWNVTSQN-ATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTK---KGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRIDLVSATFNDTR--VIISEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWF 759
            D   R+ +     + W+ +W V+ ++  T    L ++PM W   G  H      P  T       LLGFNEPN ++QAN++P++AA  W   L +    + K+ SP+             +    W  +FFA  +QL       + Y+  H Y CN     D +  + A +N  +  + ++E  C   +   +AT + +FM+  +PMLE    +  Y+WF
Sbjct:   34 DLKCRDFTPFVGKLAWWYDWRVSGKDQCTTDDSLEYVPMFW---GLDH-----VPMITNIRGNKYLLGFNEPNFRVQANISPELAAEKWVQ-LQKNVPANVKMVSPAAAPCDTNDKNTCNMQFSTWFTRFFARCNQL---GGCRIDYVATHHYTCN---AYDLLGYLGAVYNQVKKPLWVTEFSCPWTRY--DATPIKNFMRAAIPMLEKSSFIYRYAWF 236          
BLAST of jgi.p|Trimin1|181411 vs. uniprot
Match: A0A8H6Y2I3_9AGAR (Glycosyl hydrolase 53-domain-containing protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6Y2I3_9AGAR)

HSP 1 Score: 77.0 bits (188), Expect = 3.070e-12
Identity = 66/237 (27.85%), Postives = 98/237 (41.35%), Query Frame = 1
Query:  157 VRWYNNWNVTSQNATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELD--FKLASPSPTKKGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRIDLVSATFNDTRVIISEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPR-----VAYYSWFNGLEKYAVSPASSSLFSRKNKLSALGLEY 846
            V W  NWN+T+ +  A S L F+PM W+  G  +    ++           +L FNEP+  +QANMTP+ AAS+W    +  K  D   +L +P+ T  G      +GI WLQ+F  E           + +I  H Y    A+    +   ++ F    + I+E   A   L   A  M  FM         HP      V  Y+WF   E+         L   +  L+  G +Y
Sbjct:   59 VSWVYNWNITAPDYLADSGLEFVPMQWNGVGIENLAATVKQLGA-----KYVLAFNEPDSSLQANMTPETAASLWMQYFEPLKTEDSTIQLGAPAVTSNG------TGIPWLQKFMTEC------ATCTIDFIPFHWYGMGSASFYQYLYEFNSLFPSYPLWITEY--ADTTLTDEA--MTAFMXXXXXGESTHPLDDIDFVERYAWF-AYERTQTDGFHYYLMDAQGDLTTAGQKY 273          
BLAST of jgi.p|Trimin1|181411 vs. uniprot
Match: A0A2M7NTJ4_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium CG_4_10_14_3_um_filter_31_253 TaxID=1973987 RepID=A0A2M7NTJ4_9FLAO)

HSP 1 Score: 77.8 bits (190), Expect = 3.430e-12
Identity = 68/273 (24.91%), Postives = 123/273 (45.05%), Query Frame = 1
Query:   70 TKSKKRGVSIDPRSSGDYFAREGSLLATGVRWYNNWNVTSQNATAFSRLAFMPMVWSRYGATHW-LQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTKKGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYD-----CNIATVKDRIDLVSATFNDTRVIISEVGCAA-AKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLEKYAVSPASSSLFSRKNKLSALGLEYTKCVPKP 867
            T++ K+GV+    +SG  ++ + S  A G  W  +W +  +       + F+PM W ++      +Q ++     G     +LGFNEP+G+ QANMT   A ++W     R +E+   + SP        A +     W++ F  + ++     N  V Y+ +H Y        I  +K+  D        T   +++ G ++      +   +MDF+Q+ +P L+    V  Y+WFNGL     +   S+LF + + ++ +G  Y    P P
Sbjct:   38 TRANKKGVAFT--NSGKDWSHKTS--AAGAYWMYSWGLGLKPEIP-ENVEFVPMFWGKWSVNDANIQKVKDLVAEGKV-KYILGFNEPDGKNQANMTVDEAIALW----PRLEEIGVPIVSP--------ATVNPNNAWMKSFMQKVEE----NNLRVDYVAVHHYGGPNVMAMINKLKETYDAYKRPIWITEFAVADWGASSPTNNKYSIAQVMDFVQKALPALDEIEWVERYAWFNGLNAPLFT---SALFDKNSVITDVGKAYADHTPNP 285          
BLAST of jgi.p|Trimin1|181411 vs. uniprot
Match: A0A815ZEY7_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815ZEY7_9BILA)

HSP 1 Score: 75.5 bits (184), Expect = 3.960e-12
Identity = 66/263 (25.10%), Postives = 110/263 (41.83%), Query Frame = 1
Query:   73 KSKKRGVSI---DPRSSGDYFAREGSLLATGVRWYNNWNVTSQNATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGPGSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTKKGYPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRIDLVSATFNDTRVI-ISEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYYSWFNGLEKYAVSPAS-SSLFSRKNKLSALGLEY 846
            K+ KRG++    D   S D F      L   + W  NW   S   T    L F+P  W+      + +  +          +LLGFNEP+   QA M+P  AA +W   +        +L SPS T          G+ WL  FF E ++L +     V ++N+H Y   +      ++   A F     + ++E  C     +     + +F+ Q +  L++   V  Y+WF  ++    +  + +SL  +  +LS LG +Y
Sbjct:    4 KTGKRGIAWALQDNSDSPDIF------LNGKISWLYNW---SPKKTDAGNLEFVPTFWNGKDVGQFPEGAK----------VLLGFNEPDHDGQATMSPVDAAKIWKEHIAPLANKGVRLGSPSVTGSD------QGLNWLASFFEELNKLGDPK---VDFLNLHWYGKGVDNFIAYLEKARARFGSKHSVWVTEFACTTFSGSTPQEEVDEFLTQSIQKLDSIDWVERYAWFGAMKNLPDNVGNENSLIGQDGQLSELGKKY 238          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|181411 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYY4_9STRA5.060e-251100.00Glycosyl hydrolase catalytic core-domain-containin... [more]
A0A836CG22_9STRA6.240e-13778.28Glyco_hydro_cc domain-containing protein (Fragment... [more]
UPI001E1D73625.200e-1929.63uncharacterized protein LOC123535364 n=1 Tax=Merce... [more]
UPI001EE60FD52.050e-1726.94alkali-sensitive linkage protein 1-like n=1 Tax=Ha... [more]
A0A371DJ08_9APHY1.560e-1627.05Glyco_hydro_cc domain-containing protein n=2 Tax=P... [more]
A8N3V1_COPC71.590e-1325.33Glycosyl hydrolase 53 domain-containing protein n=... [more]
A0A1S3H8E1_LINUN6.900e-1327.27uncharacterized protein LOC106153037 n=2 Tax=Lingu... [more]
A0A8H6Y2I3_9AGAR3.070e-1227.85Glycosyl hydrolase 53-domain-containing protein n=... [more]
A0A2M7NTJ4_9FLAO3.430e-1224.91Uncharacterized protein n=1 Tax=Flavobacteriaceae ... [more]
A0A815ZEY7_9BILA3.960e-1225.10Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_256contigContig_256:6738..7760 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|181411|e_gw1.256.6.1
DescriptionGlycosyl hydrolase catalytic core
COG categoryG
Max annot lvl28221|Deltaproteobacteria
EggNOG OGsCOG3291@1|root,COG3405@1|root,COG3291@2|Bacteria,COG3405@2|Bacteria,1QX66@1224|Proteobacteria,437XJ@68525|delta/epsilon subdivisions,2X37H@28221|Deltaproteobacteria,2YUQ0@29|Myxococcales
Evalue6.99e-20
Seed ortholog378806.STAUR_3667
Hectar predicted targeting categoryother localisation
TranscriptId181733
TrackFilteredModels1
ProteinId181411
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|181411gene_18567Tribonema minus UTEX_B_3156 geneContig_256 6738..7760 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18567_1exon_18567_1Tribonema minus UTEX_B_3156 exonContig_256 6738..7760 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18567CDS_18567Tribonema minus UTEX_B_3156 CDSContig_256 6738..7760 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|181411Trimin1|181411|e_gw1.256.6.1Tribonema minus UTEX_B_3156 polypeptideContig_256 6738..7760 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18567 ID=mRNA_18567|Name=jgi.p|Trimin1|181411|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1023bp|location=Sequence derived from alignment at Contig_256:6738..7760- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTTTGATGGTCTACCCCCCACCCAAGAAAGCCACCGCGGTGAGAGTCG
GACCCTAGCGGCAAATTGCACAAAATCGAAGAAGCGCGGCGTATCCATTG
ACCCACGATCAAGCGGCGACTACTTTGCACGCGAGGGGAGCCTATTGGCC
ACTGGTGTGCGCTGGTACAATAACTGGAACGTCACCTCCCAGAACGCCAC
GGCGTTCAGTCGCCTGGCCTTCATGCCCATGGTGTGGTCGCGATATGGGG
CGACGCATTGGCTGCAGGCCATTCAGCCGCCACCAACCCCTGGAGGCCCT
GGCAGCATTCTGCTAGGGTTTAATGAGCCCAACGGCCAAATGCAGGCCAA
CATGACGCCGCAGGTTGCGGCGTCTGTCTGGGGGGGTGTCCTGGACAGGG
CAAAGGAGCTGGACTTCAAGCTAGCCAGCCCCTCACCAACAAAAAAGGGG
TACCCGGCGGCGCTGCTGTCGGGCATTGTGTGGCTGCAGCAGTTCTTTGC
GGAGGCGGACCAGCTGTACAACACCACCAACGCAGGCGTCCACTACATCA
ACATGCACTCTTATGACTGCAACATAGCCACCGTCAAAGATCGCATCGAC
TTGGTCTCCGCGACCTTCAATGATACGCGAGTCATCATATCCGAGGTAGG
TTGCGCGGCGGCTAAGCTCGCGGGCAACGCCACCATGATGATGGACTTCA
TGCAGCAGGTGGTGCCTATGCTGGAGGCGCACCCGCGCGTGGCATACTAC
AGCTGGTTTAACGGACTAGAGAAGTACGCTGTGTCGCCTGCCAGTTCCTC
ATTGTTCAGCAGAAAGAACAAACTCTCTGCGCTCGGACTCGAGTATACCA
AATGCGTGCCGAAGCCTCAACCCGCGACCCCGCCCCCCACCTCTGCGCCC
ACTGTCGTAGCAACCCAAAACCCTCAGGCTGATGCAATCCTGCCATCCGC
CAGCGAACCCTCAGGCAGCATACTGTTCCAGCACCCACGGGAGGTACAAT
GCCTGTTGGACCTGCGATGTTGA
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protein sequence of jgi.p|Trimin1|181411

>Trimin1|181411|e_gw1.256.6.1 ID=Trimin1|181411|e_gw1.256.6.1|Name=jgi.p|Trimin1|181411|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=341bp
MFDGLPPTQESHRGESRTLAANCTKSKKRGVSIDPRSSGDYFAREGSLLA
TGVRWYNNWNVTSQNATAFSRLAFMPMVWSRYGATHWLQAIQPPPTPGGP
GSILLGFNEPNGQMQANMTPQVAASVWGGVLDRAKELDFKLASPSPTKKG
YPAALLSGIVWLQQFFAEADQLYNTTNAGVHYINMHSYDCNIATVKDRID
LVSATFNDTRVIISEVGCAAAKLAGNATMMMDFMQQVVPMLEAHPRVAYY
SWFNGLEKYAVSPASSSLFSRKNKLSALGLEYTKCVPKPQPATPPPTSAP
TVVATQNPQADAILPSASEPSGSILFQHPREVQCLLDLRC*
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mRNA from alignment at Contig_256:6738..7760-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18567 ID=mRNA_18567|Name=jgi.p|Trimin1|181411|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1023bp|location=Sequence derived from alignment at Contig_256:6738..7760- (Tribonema minus UTEX_B_3156 )
ATGTTTGATGGTCTACCCCCCACCCAAGAAAGCCACCGCGGTGAGAGTCG GACCCTAGCGGCAAATTGCACAAAATCGAAGAAGCGCGGCGTATCCATTG ACCCACGATCAAGCGGCGACTACTTTGCACGCGAGGGGAGCCTATTGGCC ACTGGTGTGCGCTGGTACAATAACTGGAACGTCACCTCCCAGAACGCCAC GGCGTTCAGTCGCCTGGCCTTCATGCCCATGGTGTGGTCGCGATATGGGG CGACGCATTGGCTGCAGGCCATTCAGCCGCCACCAACCCCTGGAGGCCCT GGCAGCATTCTGCTAGGGTTTAATGAGCCCAACGGCCAAATGCAGGCCAA CATGACGCCGCAGGTTGCGGCGTCTGTCTGGGGGGGTGTCCTGGACAGGG CAAAGGAGCTGGACTTCAAGCTAGCCAGCCCCTCACCAACAAAAAAGGGG TACCCGGCGGCGCTGCTGTCGGGCATTGTGTGGCTGCAGCAGTTCTTTGC GGAGGCGGACCAGCTGTACAACACCACCAACGCAGGCGTCCACTACATCA ACATGCACTCTTATGACTGCAACATAGCCACCGTCAAAGATCGCATCGAC TTGGTCTCCGCGACCTTCAATGATACGCGAGTCATCATATCCGAGGTAGG TTGCGCGGCGGCTAAGCTCGCGGGCAACGCCACCATGATGATGGACTTCA TGCAGCAGGTGGTGCCTATGCTGGAGGCGCACCCGCGCGTGGCATACTAC AGCTGGTTTAACGGACTAGAGAAGTACGCTGTGTCGCCTGCCAGTTCCTC ATTGTTCAGCAGAAAGAACAAACTCTCTGCGCTCGGACTCGAGTATACCA AATGCGTGCCGAAGCCTCAACCCGCGACCCCGCCCCCCACCTCTGCGCCC ACTGTCGTAGCAACCCAAAACCCTCAGGCTGATGCAATCCTGCCATCCGC CAGCGAACCCTCAGGCAGCATACTGTTCCAGCACCCACGGGAGGTACAAT GCCTGTTGGACCTGCGATGTTGA
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Coding sequence (CDS) from alignment at Contig_256:6738..7760-

>mRNA_18567 ID=mRNA_18567|Name=jgi.p|Trimin1|181411|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1023bp|location=Sequence derived from alignment at Contig_256:6738..7760- (Tribonema minus UTEX_B_3156 )
ATGTTTGATGGTCTACCCCCCACCCAAGAAAGCCACCGCGGTGAGAGTCG
GACCCTAGCGGCAAATTGCACAAAATCGAAGAAGCGCGGCGTATCCATTG
ACCCACGATCAAGCGGCGACTACTTTGCACGCGAGGGGAGCCTATTGGCC
ACTGGTGTGCGCTGGTACAATAACTGGAACGTCACCTCCCAGAACGCCAC
GGCGTTCAGTCGCCTGGCCTTCATGCCCATGGTGTGGTCGCGATATGGGG
CGACGCATTGGCTGCAGGCCATTCAGCCGCCACCAACCCCTGGAGGCCCT
GGCAGCATTCTGCTAGGGTTTAATGAGCCCAACGGCCAAATGCAGGCCAA
CATGACGCCGCAGGTTGCGGCGTCTGTCTGGGGGGGTGTCCTGGACAGGG
CAAAGGAGCTGGACTTCAAGCTAGCCAGCCCCTCACCAACAAAAAAGGGG
TACCCGGCGGCGCTGCTGTCGGGCATTGTGTGGCTGCAGCAGTTCTTTGC
GGAGGCGGACCAGCTGTACAACACCACCAACGCAGGCGTCCACTACATCA
ACATGCACTCTTATGACTGCAACATAGCCACCGTCAAAGATCGCATCGAC
TTGGTCTCCGCGACCTTCAATGATACGCGAGTCATCATATCCGAGGTAGG
TTGCGCGGCGGCTAAGCTCGCGGGCAACGCCACCATGATGATGGACTTCA
TGCAGCAGGTGGTGCCTATGCTGGAGGCGCACCCGCGCGTGGCATACTAC
AGCTGGTTTAACGGACTAGAGAAGTACGCTGTGTCGCCTGCCAGTTCCTC
ATTGTTCAGCAGAAAGAACAAACTCTCTGCGCTCGGACTCGAGTATACCA
AATGCGTGCCGAAGCCTCAACCCGCGACCCCGCCCCCCACCTCTGCGCCC
ACTGTCGTAGCAACCCAAAACCCTCAGGCTGATGCAATCCTGCCATCCGC
CAGCGAACCCTCAGGCAGCATACTGTTCCAGCACCCACGGGAGGTACAAT
GCCTGTTGGACCTGCGATGTTGA
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