mRNA_18497 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|354523
Unique Name	mRNA_18497
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|354523 vs. uniprot
Match: A0A836CFP6_9STRA (FHA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFP6_9STRA)

HSP 1 Score: 801 bits (2070), Expect = 4.410e-284
Identity = 641/641 (100.00%), Postives = 641/641 (100.00%), Query Frame = 1

Query:    1 MAEVAEERLTSIFAPAPEGELAAPGTDAFCRGNACEVLQAGDDAAALRALLVAEFGRRALTYGARATRVLNAGLGPQQRTLLMEAAALDRARCAETLLREFGCRVNAQSAETGDAALHCAARHGARAAALALLMHAADASLRNNADECAQRAAXXXXXALGPLLSRFARAPALAXXXXXXXXXXXXCDVRAENTAYACARXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRALAAXAGVGAGARAADAEDPFAGTAMAPYIVQALATGRDPFMAEGGGAEEAERDRWQLVWRAHDAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSASYRLVVKASEGVQPGKQWALPVGSDLVIGRNHRECQIVVKEVWVSKKHARLVVTPAGPAIYNLKAKHGIIVAVRKPGEQGPHITRYPVPVPPEGLSLMDGDEISIGKTVLVLHQNEPALPQPTPAAAXXXXXXXXQSKGSAKGASWKASGKGTVMSRGFQANTSFFEAMRGAQATEDQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQGGPARFVHAPTTSTPFAALLSASASSDV 1923
            MAEVAEERLTSIFAPAPEGELAAPGTDAFCRGNACEVLQAGDDAAALRALLVAEFGRRALTYGARATRVLNAGLGPQQRTLLMEAAALDRARCAETLLREFGCRVNAQSAETGDAALHCAARHGARAAALALLMHAADASLRNNADECAQRAAXXXXXALGPLLSRFARAPALAXXXXXXXXXXXXCDVRAENTAYACARXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRALAAXAGVGAGARAADAEDPFAGTAMAPYIVQALATGRDPFMAEGGGAEEAERDRWQLVWRAHDAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSASYRLVVKASEGVQPGKQWALPVGSDLVIGRNHRECQIVVKEVWVSKKHARLVVTPAGPAIYNLKAKHGIIVAVRKPGEQGPHITRYPVPVPPEGLSLMDGDEISIGKTVLVLHQNEPALPQPTPAAAXXXXXXXXQSKGSAKGASWKASGKGTVMSRGFQANTSFFEAMRGAQATEDQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQGGPARFVHAPTTSTPFAALLSASASSDV
Sbjct:    1 MAEVAEERLTSIFAPAPEGELAAPGTDAFCRGNACEVLQAGDDAAALRALLVAEFGRRALTYGARATRVLNAGLGPQQRTLLMEAAALDRARCAETLLREFGCRVNAQSAETGDAALHCAARHGARAAALALLMHAADASLRNNADECAQRAAXXXXXALGPLLSRFARAPALAXXXXXXXXXXXXCDVRAENTAYACARXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRALAAXAGVGAGARAADAEDPFAGTAMAPYIVQALATGRDPFMAEGGGAEEAERDRWQLVWRAHDAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSASYRLVVKASEGVQPGKQWALPVGSDLVIGRNHRECQIVVKEVWVSKKHARLVVTPAGPAIYNLKAKHGIIVAVRKPGEQGPHITRYPVPVPPEGLSLMDGDEISIGKTVLVLHQNEPALPQPTPAAAXXXXXXXXQSKGSAKGASWKASGKGTVMSRGFQANTSFFEAMRGAQATEDQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQGGPARFVHAPTTSTPFAALLSASASSDV 641

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354523 vs. uniprot

BLAST of jgi.p|Trimin1|354523 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CFP6_9STRA	4.410e-284	100.00	FHA domain-containing protein n=1 Tax=Tribonema mi...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_263	contig	Contig_263:11154..18949 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|354523\|estExt_Genemark1.C_Ctg_2630003
Hectar predicted targeting category	other localisation
TranscriptId	354845
Track	FilteredModels1
ProteinId	354523

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354523	gene_18497	Tribonema minus UTEX_B_3156	gene	Contig_263 11154..18949 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354523	Trimin1\|354523\|estExt_Genemark1.C_Ctg_2630003	Tribonema minus UTEX_B_3156	polypeptide	Contig_263 11154..18738 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_18497_1	exon_18497_1	Tribonema minus UTEX_B_3156	exon	Contig_263 11154..11249 +
exon_18497_2	exon_18497_2	Tribonema minus UTEX_B_3156	exon	Contig_263 12107..12347 +
exon_18497_3	exon_18497_3	Tribonema minus UTEX_B_3156	exon	Contig_263 12696..13222 +
exon_18497_4	exon_18497_4	Tribonema minus UTEX_B_3156	exon	Contig_263 14165..14233 +
exon_18497_5	exon_18497_5	Tribonema minus UTEX_B_3156	exon	Contig_263 14525..14809 +
exon_18497_6	exon_18497_6	Tribonema minus UTEX_B_3156	exon	Contig_263 15475..15537 +
exon_18497_7	exon_18497_7	Tribonema minus UTEX_B_3156	exon	Contig_263 16985..17205 +
exon_18497_8	exon_18497_8	Tribonema minus UTEX_B_3156	exon	Contig_263 17846..18108 +
exon_18497_9	exon_18497_9	Tribonema minus UTEX_B_3156	exon	Contig_263 18454..18569 +
exon_18497_10	exon_18497_10	Tribonema minus UTEX_B_3156	exon	Contig_263 18694..18949 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_18497	CDS_18497	Tribonema minus UTEX_B_3156	CDS	Contig_263 11154..11249 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_18497	UTR3_18497	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_263 18739..18949 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_263:11154..18949+
coding sequence from alignment at Contig_263:11154..18949+

spliced messenger RNA

>mRNA_18497 ID=mRNA_18497|Name=jgi.p|Trimin1|354523|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2137bp|location=Sequence derived from alignment at Contig_263:11154..18949+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGAAGTCGCAGAGGAGCGTTTGACTTCAATATTTGCGCCGGCGCC
GGAAGGAGAGCTCGCTGCGCCTGGCACAGACGCCTTCTGCCGAGGAAACG
CCTGCGAGGTGCTGCAGGCGGGCGACGACGCGGCGGCGCTGCGCGCGCTG
CTCGTCGCGGAGTTCGGCCGCAGAGCGCTGACGTACGGCGCGCGCGCCAC
GCGCGTTCTCAACGCGGGGCTCGGCCCGCAACAGCGCACGCTGCTCATGG
AGGCCGCCGCGCTGGACCGCGCGCGTTGCGCAGAGACGCTGCTGCGCGAG
TTCGGCTGCCGCGTCAACGCGCAGAGCGCGGAGACAGGCGACGCGGCGCT
GCACTGCGCGGCGCGGCACGGCGCGCGCGCGGCGGCGCTCGCGCTCCTTA
TGCACGCCGCCGACGCCTCCCTGCGCAACAACGCCGACGAGTGCGCGCAG
CGCGCCGCTGCCGCTGCCGCCGCCGCCCTCGGCCCGCTGCTGAGCCGCTT
CGCGCGTGCGCCGGCGCTCGCGGCGCCGCCGCCATCTGCCGCCGCCGCCG
CGGGTGGCTGCGACGTGCGAGCGGAGAATACGGCGTACGCATGCGCGCGC
AAGCGGCGGCGCGTCGGCGGCAGCGCGGTGCCGCCGAGTGGGAGATTGGG
CACGGCAGCGGCGGCGGCAGCGCAGGGGGGGGCGGAACGGCGCGCGCTGG
CGGCGGCGGCGGGGGTGGGGGCGGGGGCGCGCGCTGCAGATGCGGAGGAC
CCATTTGCGGGGACGGCTATGGCGCCGTACATTGTGCAGGCGCTGGCGAC
GGGGAGGGACCCGTTTATGGCGGAGGGGGGGGGGGCGGAGGAGGCGGAGA
GGGACCGCTGGCAGCTGGTTTGGCGCGCGCACGACGCGCAGCAGCGGCGG
CAGCGCGGCGGCGGCAGCGCCACGAGCGCTGCACTGGCCTACTACGCGCG
ACACGAAGCGGCGCTCAGGGAGCACCAGCAGCAGTACGGCGGCAGCAGCA
GCGCAAGCGCAGGAGCCGCCGCTGCAGCGCAGCGTGCCGCCGCGGGTGCG
TCGCCCTCTTCGTCGCCGCCGCCGCCGCCGCTGAGCGCGAGCTACAGGCT
GGTGGTGAAGGCGAGCGAGGGGGTGCAGCCGGGAAAGCAGTGGGCGCTGC
CTGTGGGGTCGGATCTGGTTATCGGGCGCAACCACCGCGAGTGCCAGATC
GTCGTCAAGGAGGTCTGGGTGAGCAAGAAGCACGCGCGCTTGGTGGTCAC
ACCCGCCGGACCAGCCATCTACAACCTCAAGGCGAAGCATGGCATCATCG
TCGCGGTGCGCAAGCCCGGCGAGCAGGGGCCCCACATCACGCGCTACCCC
GTACCCGTTCCCCCTGAGGGTCTCTCCCTAATGGATGGTGATGAGATCTC
CATTGGCAAAACCGTTTTGGTCCTGCATCAGAATGAGCCGGCGCTGCCGC
AGCCAACGCCCGCCGCTGCCGCGGTCACTGCCGCCGCTGCTGCGCAGTCT
AAGGGCTCTGCTAAGGGCGCCAGCTGGAAGGCCTCAGGCAAGGGCACCGT
CATGAGCCGCGGCTTCCAGGCCAACACGAGTTTCTTTGAGGCCATGCGCG
GGGCGCAGGCAACGGAGGATCAGCGCGCAGCAGCGGCCACACGGAATTCT
GCTGCCGCTGCTGCGGCTGCCGCTGCTGCTGCTGCGGCTTCCGTTGCGCC
AGCAGCACCGGTGGTGGTGGCCGCTGCGGCGCCGGCTGTGATCGTCGCAG
CCGCCACTCCTGCAGGGGGAGCAGCAGCAGCAGCAGCGACAGCAGCAGCA
GCGCCTGGCAGCAGTGCTCAACCCAGCAGCGCCGCGCAGGGAGGGCCCGC
GCGCTTTGTTCACGCGCCCACGACCAGCACCCCCTTTGCCGCCTTACTTT
CGGCTAGTGCGTCGAGCGACGTCTAATGCAGATCGTGAATACCAACTGTC
AAGGCGAGGTTGCGAGAGCAGTATGGCATTGCTCAGTAGAGGACGCAGTT
GTGTGGCAATGGCAGGAGCAGGAGTGGTTGCAAAAAGGAAACTTCACTCA
CTACAGCCACCGGGCTTCAGCTGACTTGGTTCTGAGCTCCTATAGATTCT
GACCGTGACCCTGACCGCAACAGACGCTACATGAAAC

protein sequence of jgi.p|Trimin1|354523

>Trimin1|354523|estExt_Genemark1.C_Ctg_2630003 ID=Trimin1|354523|estExt_Genemark1.C_Ctg_2630003|Name=jgi.p|Trimin1|354523|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=642bp
MAEVAEERLTSIFAPAPEGELAAPGTDAFCRGNACEVLQAGDDAAALRAL
LVAEFGRRALTYGARATRVLNAGLGPQQRTLLMEAAALDRARCAETLLRE
FGCRVNAQSAETGDAALHCAARHGARAAALALLMHAADASLRNNADECAQ
RAAAAAAAALGPLLSRFARAPALAAPPPSAAAAAGGCDVRAENTAYACAR
KRRRVGGSAVPPSGRLGTAAAAAAQGGAERRALAAAAGVGAGARAADAED
PFAGTAMAPYIVQALATGRDPFMAEGGGAEEAERDRWQLVWRAHDAQQRR
QRGGGSATSAALAYYARHEAALREHQQQYGGSSSASAGAAAAAQRAAAGA
SPSSSPPPPPLSASYRLVVKASEGVQPGKQWALPVGSDLVIGRNHRECQI
VVKEVWVSKKHARLVVTPAGPAIYNLKAKHGIIVAVRKPGEQGPHITRYP
VPVPPEGLSLMDGDEISIGKTVLVLHQNEPALPQPTPAAAAVTAAAAAQS
KGSAKGASWKASGKGTVMSRGFQANTSFFEAMRGAQATEDQRAAAATRNS
AAAAAAAAAAAAASVAPAAPVVVAAAAPAVIVAAATPAGGAAAAAATAAA
APGSSAQPSSAAQGGPARFVHAPTTSTPFAALLSASASSDV*

mRNA from alignment at Contig_263:11154..18949+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_18497 ID=mRNA_18497|Name=jgi.p|Trimin1|354523|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7796bp|location=Sequence derived from alignment at Contig_263:11154..18949+ (Tribonema minus UTEX_B_3156 )
ATGGCGGAAGTCGCAGAGGAGCGTTTGACTTCAATATTTGCGCCGGCGCC
GGAAGGAGAGCTCGCTGCGCCTGGCACAGACGCCTTCTGCCGAGGAGTAA
AGCCCAGGCCGCATTTCGATGTAGATGATACAACAGCGCTGGATGAGGAG
TTATTTAAGGCAAGCTTGCGGTCATCGCTGTCATGATGCACCTCAATCGA
ACGAAAATGCACCAATTCATTTTAGAAGCCGAGTTTACACGTTGAATCTG
CAACTAGCAGCAAGCGAGCCTTGTCTGCTGAAAAACTTTGTTCGGAATAT
TCTTGCCTGAAGGTTGTGGCAAGTTTAGCTTCTGCAGGCAGACAGTACCT
GCATCGTAGTGACATAGATCGTCATGTCTGATGTGTCATCACCATGCCAT
ACATCAGGGGATAACCGTGCAGCAGCTGTGCATTGAAAGCAGCATTGCAA
TCCAGCGCGTCAAGCGTCATTCACAGTCGCGAACGCTTTGTTTTCTCCAA
TCCTTGACACTCGCAGTGCCATGGTCAGCTTGTGCGTCACTCTCCTTCAC
TGACAACAGGTGTGGGAGCGCGTGCCTTCTCGCTACGGCGCCAGCCACTG
TCGTCACCTGCATATTATTGAGTACAGACACCACAAGTGCCAACATATCT
GCAGGATGACGGCCTTCAGCAAGGATATGCTCTGCAATAGCTGCAGCCCA
ATTCTCAGTAAGGCGCGGCCCTTCTACAGGTGTGGAACACCAGCGCCAAC
GTTGTCAATGGACAGTCCAGCAGCCGCAATCAGTGCCCCCGCAACCACAA
GGCACTGCAATGCAGGAGCTCGTTGCCAACGCGCGCCCCCCCCCCCTCCC
GCAGTCGCAAGAGTTGATCCCACATCTACCACTGTATACATATCCACCCG
CTCTCATGCCAACGCCCCCCCCCCCCCCCCCCGCCCCATTTTCTGCTCCG
CAGAACGCCTGCGAGGTGCTGCAGGCGGGCGACGACGCGGCGGCGCTGCG
CGCGCTGCTCGTCGCGGAGTTCGGCCGCAGAGCGCTGACGTACGGCGCGC
GCGCCACGCGCGTTCTCAACGCGGGGCTCGGCCCGCAACAGCGCACGCTG
CTCATGGAGGCCGCCGCGCTGGACCGCGCGCGTTGCGCAGAGACGCTGCT
GCGCGAGTTCGGCTGCCGCGTCAACGCGCAGAGCGCGGAGACAGGTGCGC
GACACCGCTGCTGGTGGTGGTGGTGGCGGTGGTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCCGCCGCCGCTGCTGCTGCTGCTGTTCCTTTGCTGC
TGCGAAAACTATCGCTGCTGCTGCTGCTGCTGCGCCTGCTGGGGGTTGCA
GTGCTGGTGGTGGTTGCAGTGCATGTGGACACGGGCGCGTTGGCTTGTTG
AGCGATGGCTACATGAAGACGCGTGTGAATGGCCGCGCTTTCTGCTCAAA
TGCCAAACCTTCAATACGCCATCGACCCTACACCACCACACTCAGAGAGC
CCCCCCCCTTACCCCATCCCCCTCCCCGCCCCCGCCGTGCAGGCGACGCG
GCGCTGCACTGCGCGGCGCGGCACGGCGCGCGCGCGGCGGCGCTCGCGCT
CCTTATGCACGCCGCCGACGCCTCCCTGCGCAACAACGCCGACGAGTGCG
CGCAGCGCGCCGCTGCCGCTGCCGCCGCCGCCCTCGGCCCGCTGCTGAGC
CGCTTCGCGCGTGCGCCGGCGCTCGCGGCGCCGCCGCCATCTGCCGCCGC
CGCCGCGGGTGGCTGCGACGTGCGAGCGGAGAATACGGCGTACGCATGCG
CGCGCAAGCGGCGGCGCGTCGGCGGCAGCGCGGTGCCGCCGAGTGGGAGA
TTGGGCACGGCAGCGGCGGCGGCAGCGCAGGGGGGGGCGGAACGGCGCGC
GCTGGCGGCGGCGGCGGGGGTGGGGGCGGGGGCGCGCGCTGCAGATGCGG
AGGACCCATTTGCGGGGACGGCTATGGCGCCGTACATTGTGCAGGCGCTG
GCGACGGGGAGGGACCCGTTTATGGCGGAGGGGGGGGGGGCGGAGGAGGC
GGAGAGGGACCGCTGGCAGGTATGTATATATGTGTTGGTGTGTTTGTAGG
TAGGCATGTGTATGTGAGACAGGGGGGAAGGCGGTGCTTCCGCTGGCAGT
TGCACATGGTAGGGGGGGGGGAGGGGGGCTGCAGCACAACCACTGGCAGG
GTGTGTAAGTGTGTGTGTGTAGGTGTGTGTGAGGCGGCGGGGAGGCTGAT
GGTTGGTGGGTGGTGTATCAAGTACAGTAGTGATGTCTGCAATGTGGCAT
ACTGTAGCGGCTGTAGTGCGAGTGGGCCCGTGAAGGTGGCTTGCGCTGGC
ACTTCGCCACTGAGCGTTAATACGCTGCGCGCGCACCAGCCGCCGCTGGA
TCAGAAGCAGCTGTTTAGAGTGTGGGTGGCAGCACTGCTGCGCAGCGGCA
CCACTCGTGGCGGCTGAACACAGCAACGGCGGGTGCGCAGCAGCACCGCC
ACAAGTCAAGATTGCTACCTGTGCTTTGGCCGCAGTTGTAGTCAGGCAAT
GCCTTCAACGCCAATGCCAATGTCAACTGCATCTTATCCCAGGGGCGCAA
CACTGAGCAGCACGCACGGAGCACTGGCGCTTTACATTGCTGGCCAGCAT
GAATGGAAGCAAAAGCTGTGAATACATATTTGTCGACCAAAACAAAGTAC
ATTGCATCCACAACTCCTTCACTGTAATCTTCCCAGACACTGTATATACA
CTGTGAGCAGCGATTCAAGTAGATGCGGAAGCAATGCAGCAGCGGCGGCG
GCTGCATCAACTGCCCCCGTGCCGCCCACCACGCTCCAACCCTAACCCTA
AGCACAGCTGGCGTATCGCGCGCGGTGCGAAGCGGCAGCAGCGTGCTGGT
GACGGCCCATAATGCGCGGTTGCAGTGCACCCATGTAACGCAGCGCACGC
CCTGCCGTCAAATGCGCCGAGCATCACAGTCCTCGACACCGCCCGCCGCC
GCGCTGCGCAGCTGGTTTGGCGCGCGCACGACGCGCAGCAGCGGCGGCAG
CGCGGCGGCGGCAGCGCCACGAGCGCTGCAGTTGCGGGTTCAACCGCACC
CCCGCAGTGCGCTCCGCGCCGCCGTGAATTGTGCTGAGCACAGTCGCAAG
GACGTCATCACGTGACGTACAACCGATGAGCGCTGACATCGCATCAACCC
ACTAGAATATGAGTGATGTTCATGGAAACGGTTCAAAAGTTCAGATTATG
ATGCCAACGAATGAATTCAGATGTTCATATACTTCTTTTTGAAGTATATA
TATATATACATGACAACGCTGACGTCACACAACTGCATCTACGCCGCTCG
CCGCACTGCGCCGCACTGCAGCTGGCCTACTACGCGCGACACGAAGCGGC
GCTCAGGGAGCACCAGCAGCAGTACGGCGGCAGCAGCAGCGCAAGCGCAG
GAGCCGCCGCTGCAGCGCAGCGTGCCGCCGCGGGTGCGTCGCCCTCTTCG
TCGCCGCCGCCGCCGCCGCTGAGCGCGAGCTACAGGCTGGTGGTGAAGGC
GAGCGAGGGGGTGCAGCCGGGAAAGCAGTGGGCGCTGCCTGTGGGGTCGG
ATCTGGTTATCGGGCGCAACCACCGCGAGTGCCAGATCGTCGTCAAGGAG
GTCTGGGTGAGTGAGCGGGGGGGGGGGGGTCGAGTGGGTCGGTTGAGCGG
CGTTGCATGAGCGGCGCGGGGGAAGTTGGATTGAGGGTTAGGGTTTTGGG
GGTCAGGGTTAGGGGTGAAGGATGGAATATTAGGGTTACTCGCTGCGTGA
GGGGGAGGTGCGAGAAGGCGACGAGCAGGGTGGCGGCACATTGCACAGCG
TGTGCACACGCATACTTGAAGTGGTAGATGGTGTTGTTGCAGCAGAGTTG
TTGGGCCTGATCGTGCATTCCAGGGATGCGGCAGGTAGGGGCTTTGGGAT
GCTGCATGCAGTGCGGGGCTGACTGTCACGTGACAGCACTCCAAGAGCGT
CACCATGTCTGTTGCGGTATGCGTTGCCGGCTGGTAATTTTGGAATTGCC
GAGCACTAAGTATCTGTGCTATTCTTTACGGTGCGCAAGTGGCGGTCGGC
AAACTTTATGCATCGGACGACAACCACCTGGATAAAAACCACCAGGAGAG
TCATTAACGCTGCACACACCATTTCTGGGTCTTATGTTACCCTTACTATT
GTCGTCCGCCTGCCATGCTTGTGAATCATCTTGAAGAATTGTTTGGCTCG
TCAACGGGCCTGTGTCTTTACAGCACAACTGACCCTAGTCCTGACCGCGT
CTGTTCACGCACTCGCCGCAGGTGAGCAAGAAGCACGCGCGCTTGGTGGT
CACACCCGCCGGACCAGCCATCTACAACCTCAAGGTAACAGAGGGGTGCA
TTTCTCAACAGAATTAGGTTTAGGTTGGAATAAAAAATGTTGAACTTTGC
TTCGAGAAATAAACACAGTTTTTAGACTCAACAATGAAGGCAACCAGTTT
TGGTAGGGTTAAGGTTATGGTCAATTTTGTGATCAGCGCAAGAGTCATCA
GTTTGAAAATAAGTTTTTCATGGCACGGCAAACATATACTTCGAAGTACT
TGTAATTCCTCATGATTATGAAGTTTTGCAGGTACAGTGATGCTCGGCCT
CCGGCAAAGACGGGTAGGTAGTTTTTTTTTTACACTTGTGGCATGTACTC
CAGAAGTACCAGCTGACGGTGCGACTTGTTCGTGTGGCGCGCCTTGACAA
GAGACGATGCAGCACAAAGCAATCACCAAGTAGCTGGTGCCATAGTCATT
GCGCCGTCAACTGTCCCGGCCCTTTTCTGTCATGGTACACGGCTGACCTG
ACAAAGCCCGTTCTGCCCAGCAAATCACCCAAACTTCCATCTTTCATACA
AATTGGAAGCCAGACCGGCTAGAAGTAACATTTATTATAATAAACTGAGC
ACTCAGAATCTATAGTCTATTTCTGTTGCAGCACGCCCCTGGCTGAAGCA
GTCCATTGTTTCGAAAAGACGCCAACCGCGCCTTTCAATCCTTCGCGCCA
CGGCTGCCGCCTTGTGGTCTCACGCAAGGGCTCAGCACCATCGCCACTTG
TTGATGTCCTTGGTGCTCTGCCCGGTGGCATGTTTGTCCAATGTTCCCTC
ACCGAGGCGACGACGGTCTCATGCTATTGATTGGTGACTTTCCTCCATCG
CAGGCGAACTGATGTCATACGCTACTCCCCCTCCCTTCCCCCCGCTTCTG
CTGTGCAAAGGGGAGGGGGGCAATTCTATGGTCATGATCACCGCAACCAC
TGCCAAATGAAATCATGGATGTCAAAACATGCCCGCCATGCCTGACAATG
CTTCTCGTTGCTGGCGCCTCGCTCCTTGACCGCAGGCGAAACACGGCACT
ACTGTCATCATCTCGATAATTGACTTAATTGGTGCTCTGCTCGGCCGCAG
GTGAACCTAGGCGCCTTGGCATCTGTGGCCGACGTTTCCTCATCAAAATG
ACAGTGGTATCATGCCATCGGCTGGTGACTCACTCCTCGGCTGTAGGCGA
ACTGATGTCACACGCTACACCCCCCCGCTTCTGCTGTGCAGGGGGGGGGG
GGGGGATTCTTCGGTCACGGTCACCACAGCCATTGCCGAATGAAATCATG
GACGTCAAGACACGCTGGCAAGGTTTGAGTTCTTCTTGTTGATGGTGACT
CTCCTCTGCAAGCGCAGGCGAAGCACGGCATCATTGTCACCGCAATTGAT
CGCGTCAAAAGACGCCGACTACGCTTGCCGATCGGTGATCATATACTTCA
TGTTATCGGTGCCTCTCCTCTGCAACCGCAGGCGAAGCATGGCATCATCG
TCGCGGTGCGCAAGCCCGGCGAGCAGGGGCCCCACATCACGCGCTACCCC
GTACCCGTTCCCCCTGAGGGTCTCTCCCTAATGGATGGTGATGAGATCTC
CATTGGCAAAACCGTTTTGGTCCTGCATCAGAATGAGCCGGCGCTGCCGC
AGCCAACGCCCGCCGCTGCCGCGGTCACTGCCGCCGCTGCTGCGCAGTCT
AAGTGAGTTGAGGGGCGTCGCACAGTGTGGTTTGTGATGATGATGCGGAA
ATTTTTGCGTGATCAGTGCGGACATGGCACGCAGCTGTGTTTGGAAGTGT
GGTGGTATTGCCTGAGCCCTGTCATGTGCGCGTACGCCTAGGATTAGGGT
TAGGGTTTAGGGTTGGTTCACTTGCCGTAGCGTCAGCCACCCCCCTGTAA
CAGTCTGCACCAACTTGGCCTGCCACAGCCGCAACAAAAATCTCAGCAAG
TCCTTGACATGGTGCTATCAGGTGTGCCTAAAAGTGTGTCAGTAAATGCG
TGTATAATGTACTGTTCTGCATGTACCATGACGCCAGCGTGCCACATGAA
TTGCGCGCATGCCTGCCCTGTATATCGGTCGACGGCGCTGCAATTGCCAG
TCCTGCACGATCCATGCGTTCCAGCATCATACACATAGGTATACCGCAAA
AATGGGACGCAGCGCGGCTCAACATGCTCATTGACAACATCTGCACACAC
GCACTGCAAGCAGCAGCAGCAGCGCACATCCACAGCACTGCGCGTTACGC
GGAACGCGCACGCAAACCTGCCAATTAACGCGCGCTGCTTGTCATGCTGT
GTATCAATGCCTCATCAACCGTCATACATACCTACCTACCAGGGGCTCTG
CTAAGGGCGCCAGCTGGAAGGCCTCAGGCAAGGGCACCGTCATGAGCCGC
GGCTTCCAGGCCAACACGAGTTTCTTTGAGGCCATGCGCGGGGCGCAGGC
AACGGAGGATCAGCGCGCAGCAGCGGCCACACGGAATTCTGCTGCCGCTG
CTGCGGCTGCCGCTGCTGCTGCTGCGGCTTCCGTTGCGCCAGCAGCACCG
GTGGTGGTGGCCGCTGCGGCGCCGGCTGTGATCGTCGCAGCCGCCACTCC
TGCAGGTGTGTACTTCAAGTATTTTGTTTTTCACGCAAAATACCGTGTAA
AAAATAAGAGTTTGATGGTTTTGAGTGCAGCGGCGACGATGTGATTTGTG
CATTGGAAGGACAGGAAGGCATGAGGCTTTGGGCGTCATGCGACAGTCAG
AGGCGTCAGCGCCTTCAGCTACTTGTGGGTGCTGGTAGCGCAAACAATAT
TTGCGCGCTGCAGTAGCAATGCATCCTTGAAGTGGCCATGTGCCGGCGAA
TGAGCTTTGGGCTGACATGCGCGTGAGCCCTCACAATACTCTCTTCCTTC
CCTTGTGCCAGACTCATGTACACAATGCTGCCTTTTGTCGGTCTTTGCAG
GGGGAGCAGCAGCAGCAGCAGCGACAGCAGCAGCAGCGCCTGGCAGCAGT
GCTCAACCCAGCAGCGCCGCGCAGGGAGGGCCCGCGCGCTTTGTTCACGC
GCCCACGACCAGCACCGTCACAAGGCGCCCTGCGCGCGGCCGTGGTCGTG
GTTGAAGTCAAACTTGAAGTTGTAGTGTCAGACTTCACATGTACTAAATG
ACAAGTAGATGTCAACACCATGTGCGTTCTGTTTGCGCAGCCCTTTGCCG
CCTTACTTTCGGCTAGTGCGTCGAGCGACGTCTAATGCAGATCGTGAATA
CCAACTGTCAAGGCGAGGTTGCGAGAGCAGTATGGCATTGCTCAGTAGAG
GACGCAGTTGTGTGGCAATGGCAGGAGCAGGAGTGGTTGCAAAAAGGAAA
CTTCACTCACTACAGCCACCGGGCTTCAGCTGACTTGGTTCTGAGCTCCT
ATAGATTCTGACCGTGACCCTGACCGCAACAGACGCTACATGAAAC

Coding sequence (CDS) from alignment at Contig_263:11154..18949+

>mRNA_18497 ID=mRNA_18497|Name=jgi.p|Trimin1|354523|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1926bp|location=Sequence derived from alignment at Contig_263:11154..18949+ (Tribonema minus UTEX_B_3156 )
ATGGCGGAAGTCGCAGAGGAGCGTTTGACTTCAATATTTGCGCCGGCGCC
GGAAGGAGAGCTCGCTGCGCCTGGCACAGACGCCTTCTGCCGAGGAAACG
CCTGCGAGGTGCTGCAGGCGGGCGACGACGCGGCGGCGCTGCGCGCGCTG
CTCGTCGCGGAGTTCGGCCGCAGAGCGCTGACGTACGGCGCGCGCGCCAC
GCGCGTTCTCAACGCGGGGCTCGGCCCGCAACAGCGCACGCTGCTCATGG
AGGCCGCCGCGCTGGACCGCGCGCGTTGCGCAGAGACGCTGCTGCGCGAG
TTCGGCTGCCGCGTCAACGCGCAGAGCGCGGAGACAGGCGACGCGGCGCT
GCACTGCGCGGCGCGGCACGGCGCGCGCGCGGCGGCGCTCGCGCTCCTTA
TGCACGCCGCCGACGCCTCCCTGCGCAACAACGCCGACGAGTGCGCGCAG
CGCGCCGCTGCCGCTGCCGCCGCCGCCCTCGGCCCGCTGCTGAGCCGCTT
CGCGCGTGCGCCGGCGCTCGCGGCGCCGCCGCCATCTGCCGCCGCCGCCG
CGGGTGGCTGCGACGTGCGAGCGGAGAATACGGCGTACGCATGCGCGCGC
AAGCGGCGGCGCGTCGGCGGCAGCGCGGTGCCGCCGAGTGGGAGATTGGG
CACGGCAGCGGCGGCGGCAGCGCAGGGGGGGGCGGAACGGCGCGCGCTGG
CGGCGGCGGCGGGGGTGGGGGCGGGGGCGCGCGCTGCAGATGCGGAGGAC
CCATTTGCGGGGACGGCTATGGCGCCGTACATTGTGCAGGCGCTGGCGAC
GGGGAGGGACCCGTTTATGGCGGAGGGGGGGGGGGCGGAGGAGGCGGAGA
GGGACCGCTGGCAGCTGGTTTGGCGCGCGCACGACGCGCAGCAGCGGCGG
CAGCGCGGCGGCGGCAGCGCCACGAGCGCTGCACTGGCCTACTACGCGCG
ACACGAAGCGGCGCTCAGGGAGCACCAGCAGCAGTACGGCGGCAGCAGCA
GCGCAAGCGCAGGAGCCGCCGCTGCAGCGCAGCGTGCCGCCGCGGGTGCG
TCGCCCTCTTCGTCGCCGCCGCCGCCGCCGCTGAGCGCGAGCTACAGGCT
GGTGGTGAAGGCGAGCGAGGGGGTGCAGCCGGGAAAGCAGTGGGCGCTGC
CTGTGGGGTCGGATCTGGTTATCGGGCGCAACCACCGCGAGTGCCAGATC
GTCGTCAAGGAGGTCTGGGTGAGCAAGAAGCACGCGCGCTTGGTGGTCAC
ACCCGCCGGACCAGCCATCTACAACCTCAAGGCGAAGCATGGCATCATCG
TCGCGGTGCGCAAGCCCGGCGAGCAGGGGCCCCACATCACGCGCTACCCC
GTACCCGTTCCCCCTGAGGGTCTCTCCCTAATGGATGGTGATGAGATCTC
CATTGGCAAAACCGTTTTGGTCCTGCATCAGAATGAGCCGGCGCTGCCGC
AGCCAACGCCCGCCGCTGCCGCGGTCACTGCCGCCGCTGCTGCGCAGTCT
AAGGGCTCTGCTAAGGGCGCCAGCTGGAAGGCCTCAGGCAAGGGCACCGT
CATGAGCCGCGGCTTCCAGGCCAACACGAGTTTCTTTGAGGCCATGCGCG
GGGCGCAGGCAACGGAGGATCAGCGCGCAGCAGCGGCCACACGGAATTCT
GCTGCCGCTGCTGCGGCTGCCGCTGCTGCTGCTGCGGCTTCCGTTGCGCC
AGCAGCACCGGTGGTGGTGGCCGCTGCGGCGCCGGCTGTGATCGTCGCAG
CCGCCACTCCTGCAGGGGGAGCAGCAGCAGCAGCAGCGACAGCAGCAGCA
GCGCCTGGCAGCAGTGCTCAACCCAGCAGCGCCGCGCAGGGAGGGCCCGC
GCGCTTTGTTCACGCGCCCACGACCAGCACCCCCTTTGCCGCCTTACTTT
CGGCTAGTGCGTCGAGCGACGTCTAA