mRNA_18411 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354422
Unique NamemRNA_18411
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A835Z3T7_9STRA (XAP5, circadian clock regulator-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3T7_9STRA)

HSP 1 Score: 645 bits (1663), Expect = 4.440e-231
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 3 
Query:  195 MSSEFHSGFKRDTTGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFGGSATDQFEAMFKSKTVGLVTADEFRKAREEAEKVLPSAECSESVGTEGSAXXXXXXXXXXXXXXXXXXXXXXXXXTLSFGGDXXXGEEGGEGPEESSVGKGAAKKVFKNPHVDTSFLPDREREAQMAREKSRLRQEWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLSTDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVFDDVRLIHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDPSKDYGDYTTHGREVNEKN 1280
            MSSEFHSGFKRDTTGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFGGSATDQFEAMFKSKTVGLVTADEFRKAREEAEKVLPSAECSESVGTEGSAXXXXXXXXXXXXXXXXXXXXXXXXXTLSFGGDXXXGEEGGEGPEESSVGKGAAKKVFKNPHVDTSFLPDREREAQMAREKSRLRQEWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLSTDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVFDDVRLIHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDPSKDYGDYTTHGREVNEKN
Sbjct:    1 MSSEFHSGFKRDTTGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFGGSATDQFEAMFKSKTVGLVTADEFRKAREEAEKVLPSAECSESVGTEGSAXXXXXXXXXXXXXXXXXXXXXXXXXTLSFGGDXXXGEEGGEGPEESSVGKGAAKKVFKNPHVDTSFLPDREREAQMAREKSRLRQEWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLSTDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVFDDVRLIHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDPSKDYGDYTTHGREVNEKN 362
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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: D8LMC0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMC0_ECTSI)

HSP 1 Score: 409 bits (1051), Expect = 3.230e-138
Identity = 238/356 (66.85%), Postives = 279/356 (78.37%), Query Frame = 3 
Query:  219 FKRDTTGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFGGSATDQFEAMFKSKTVGLVTADEFRKAREEAEKVLPSAECSESVGTEGSAXXXXXXXXXXXXXXXXXXXXXXXXXTLSFGGDXXX---GEEGGEGPEESSVGKGAAKKVFKNPHVDTSFLPDREREAQMAREKSRLRQEWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLSTDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVFDDVRLIHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDPSKDYGDYTTHGREVNEK 1277
            FKR  TGI+T EG ++G RAA+L K+R   Q +YE+K++KIQDEY RG L+I+ KFGGSATDQ+EAMFK+ TVGLVTADEF+KAR  AE  +   E           XXXXXXXXXXXXXXXXXXXXXXXX TLSFG +      GE GG+      +GK       KNP+VDTSFLPDRERE  M  ++ +L++EW+++Q+K+K E LEVTYSYWDG+GHRR I + KG TVGKFLE VRQQLS DFSE+R+ SS+NLLY+KEDLIIPH +SFYDLIVTKARGKSGPLFHFDV DD+RL+HD  +EKDESHPGK+VERRWYER+KHIFPASRWE YDP KDYG YT HG EVNEK
Sbjct:    5 FKRGDTGINTAEGQISGPRAARLAKQRLEDQKDYESKRQKIQDEYHRGALKIDDKFGGSATDQYEAMFKATTVGLVTADEFKKARVLAETGVGDKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLSFGEEIEEDDQGEGGGDAEPPLKLGK-------KNPNVDTSFLPDREREKGMRDQREKLKKEWIEEQEKLKMERLEVTYSYWDGSGHRREIVLNKGITVGKFLEMVRQQLSQDFSEMRSVSSENLLYIKEDLIIPHHFSFYDLIVTKARGKSGPLFHFDVHDDIRLVHDTRIEKDESHPGKIVERRWYERNKHIFPASRWETYDPQKDYGTYTIHGGEVNEK 353
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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A7S3HT52_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HT52_9STRA)

HSP 1 Score: 355 bits (912), Expect = 2.580e-117
Identity = 191/351 (54.42%), Postives = 254/351 (72.36%), Query Frame = 3 
Query:  234 TGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFGGSATDQFEAMFKSKTVGLVTADEFRKAREEAEKVLPSAECSESVGTEGSAXXXXXXXXXXXXXXXXXXXXXXXXXTLSFGGDXXXGEEGGEGPEESSVGKGAAKKVFKNPHVDTSFLPDREREAQMAREKSRLRQEWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLSTDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVFDDVRLIHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDP--SKDYGDYTTHGREVNEKN 1280
            +GIHTVEG++AGNRAA LTK+R+AQ+AEYEA K KI+++   G  +I+ KF  SA+D  E  F+ KTVGLV+A +FRKAREE  ++    +  E+   +                            +LSF  +   G+E  EG E + V K   KK  K+P VDTS+LPDR+R+A++  +K++L++EW+ +QD+IK E+L+V YSYWDG+GHR+TI++ KGTT+G+FLE V+ QL  +F E+R+T+ D+ +YVKEDLIIPH YSFYDLIVTKARGKSGPLFHFDV DDVR+++DATVEKDESHPGK+ ERRWYER+KHIFPASRWEVYDP  +++   YT HG EV +K+
Sbjct:    9 SGIHTVEGTVAGNRAAVLTKQRDAQRAEYEAVKNKIKEDNAAGVGKIDDKFS-SASDVLEQEFRRKTVGLVSATDFRKAREETIEIKVDTKAQEAKELKAQQNKEKTRELKRKKIAS----------SLSF--EVNDGDEQDEGEEVAFVSKN--KKRLKDPTVDTSYLPDRDRDAEINAKKAQLQKEWLAEQDRIKNEMLQVVYSYWDGSGHRKTIEVRKGTTIGRFLELVKAQLIGEFHEVRSTNPDDFVYVKEDLIIPHHYSFYDLIVTKARGKSGPLFHFDVHDDVRMVNDATVEKDESHPGKIAERRWYERNKHIFPASRWEVYDPRVNREQQGYTIHGGEVTKKD 344
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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A7S2M861_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M861_9STRA)

HSP 1 Score: 347 bits (889), Expect = 1.830e-113
Identity = 212/368 (57.61%), Postives = 263/368 (71.47%), Query Frame = 3 
Query:  204 EFHSGFKRDTTGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFGGSATDQFEAM-FKSKTVGLVTADEFRKAREEAEKVLPSAECSESVG-TEGSAXXXXXXXXXXXXXXXXXXXXXXXXX-------TLSFGGDXXXGEEGGEGPEESSVGKGAAKKVFKNPHVDTSFLPDREREAQMAREKSRLRQEWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLSTDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVFDDVRL-IHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDPSKDYGDYTTHGREVNEK 1277
            +F + F R  TGI+TVEG++AG+RAA L+KKR A+QA++EA+K+KI+ + +RG L I+ KF  +     E   F++KTVGLVTA+EFRKA  EAEK        E  G  +G A        XXXXXXXXXXXXXXXXX       TLSFG D    +   +  + SS  K   K + KNP VDTSFLPD+ERE     EK RLR++W+ +Q  +K+E+LE+TYSYWDGTGHRRT++  KG TV +FLE VR  L+ DF E++  SSD L+YVKEDLI+P   SFYDLI T+ARGKSGPLF+FDV DDVR+   D  VEKDESHPGKVVERRWY+R+KHIFPASRWE+YDP+K+YG YT HG EVN+K
Sbjct:    3 DFQANFIRPDTGINTVEGNVAGSRAATLSKKRAAEQADFEARKQKIKADSERGKLGIDSKFDTNTNVSAEEQRFRAKTVGLVTAEEFRKASAEAEKARGKRIGEEDEGDNDGEAAPKLSEEEXXXXXXXXXXXXXXXXXXXXXXMATLSFGADEELDDNDADANDLSSGTK--TKTINKNPEVDTSFLPDQEREEHAKAEKERLRKKWLDRQAAMKEEILEITYSYWDGTGHRRTVQCKKGDTVAQFLETVRSSLAKDFREMQNVSSDALIYVKEDLILPQDVSFYDLIATRARGKSGPLFNFDVHDDVRVGAVDTRVEKDESHPGKVVERRWYDRNKHIFPASRWEIYDPAKEYGRYTIHGGEVNKK 368
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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A7S2UBR5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBR5_9STRA)

HSP 1 Score: 337 bits (864), Expect = 8.900e-110
Identity = 198/363 (54.55%), Postives = 267/363 (73.55%), Query Frame = 3 
Query:  204 EFHSGFKRDTTGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFGG-SATDQFEAMFKSKTVGLVTADEFRKAREEAEK----VLPSAECSESVGTEGSAXXXXXXXXXXXXXXXXXXXXXXXXXTLSFGGDXXXGEEGGEGPEESSVGKGAAKKVFKNPHVDTSFLPDREREAQMAREKSRLRQEWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLSTDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVFDDVRL-IHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDPSKD-YGDYTTHGREVN 1271
            +F + FKR  +GIHTVEG++AG RAA LTK+REAQQ E+E +K+K+  + +RG   I+ KF G S+  + E  F+S+TVGLVTADEFRKA E+A K        +  +E++  E +      XXXXXXXXXXXXXXXX    TLSF G     ++    P+ + V +  AK++ K+P VDTSFLPD+ER+  +  ++  L+Q+W+ +Q++IK+E LE+ YSYWDG+GHRRT+++ KG ++G FLE VR++L+ +F +++  S+++LLYVKEDL+IP   +FYDLI TKARGKSGPLFHFDV DDVR+   D  VEKDESHPGK+V+RRWY+R+KHIFPASRWE +DP+KD YG YT HG EVN
Sbjct:    3 DFSANFKRPDSGIHTVEGNVAGARAATLTKQREAQQLEFEERKRKLAQDAERGSKTIQDKFSGDSSLTKAEQSFRSRTVGLVTADEFRKATEDAAKRGXXXXXXSVLTETI--ESAKELESRXXXXXXXXXXXXXXXXKILSTLSFAG----ADDADFLPDVTEVTEKVAKRLKKDPGVDTSFLPDQERQEALEHQRDLLKQQWLDEQERIKKETLEIVYSYWDGSGHRRTVQVKKGDSIGHFLECVRRELAKEFRDVQNVSAEDLLYVKEDLMIPQDITFYDLIQTKARGKSGPLFHFDVHDDVRVGAIDTRVEKDESHPGKIVQRRWYDRNKHIFPASRWETFDPAKDSYGHYTIHGGEVN 359
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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: B8C484_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C484_THAPS)

HSP 1 Score: 334 bits (856), Expect = 2.490e-108
Identity = 195/377 (51.72%), Postives = 247/377 (65.52%), Query Frame = 3 
Query:  204 EFHSGFKRDTTGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFGGSAT-DQFEAMFKSKTVGLVTADEFRKAREEAEKVLPS-AECSESVGTEG--------SAXXXXXXXXXXXXXXXXXXXXXXXXXTLSFGGDXXXGEEGGEGPEESSVGKGAAKK--------VFKNPHVDTSFLPDREREAQMAREKSRLRQEWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLSTDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVFDDVRL-IHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDPSKDYGDYTTHGREVNEK 1277
            +F + F+R  TGI+TVEG++AG+RAA L+KKR A+QA +EA+K+KI+ + +RG L I+ KF  +    + E  F+ +TVGLV+A EF++A  E EK      E     G EG                      XXX           LSF GD    ++   G +E S GK +  K        + KNP VDTSFLPD+ RE +   E++RLR+EW+ +Q  +K+E+LE+TYSYWDGTGHRRT+   KG TV +FLE VR+ L+ +F E+   SSD LLYVKEDLIIP   SFYDLI T+ARGKSGPLF+FDV DDVRL   DA VEKDESHPGKVVERRWY+R+KHIFPASRWE YDP+K+YG YT HG EV +K
Sbjct:    3 DFQANFQRPDTGINTVEGNVAGSRAATLSKKRAAEQASFEARKQKIKADSERGKLGIDAKFDTNTNVSKEEQKFREQTVGLVSAAEFKRANAEIEKARSKRGEDEFDDGVEGVDGGTSITEEELKRLEKDRKKAXXXALKEKKKRMAALSFAGDEELEDDETNGADEPSDGKESNDKQSTKEDKGIMKNPSVDTSFLPDQGREQRAKEERNRLRREWLDRQKTMKEEVLEITYSYWDGTGHRRTVHCKKGDTVAQFLELVRKDLAKEFREMCNVSSDALLYVKEDLIIPQDISFYDLIATRARGKSGPLFNFDVHDDVRLGALDARVEKDESHPGKVVERRWYDRNKHIFPASRWEPYDPAKEYGTYTIHGGEVTKK 379
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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A484DRV9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRV9_BRELC)

HSP 1 Score: 316 bits (809), Expect = 5.920e-102
Identity = 179/344 (52.03%), Postives = 229/344 (66.57%), Query Frame = 3 
Query:  231 TTGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFGGSATDQFEAMFKSKTVGLVTADEFRKAREEAEKVLPSAECSESVGTEGSAXXXXXXXXXXXXXXXXXXXXXXXXXTLSFGGDXXXGEEGGEGPEESSVGKGAAKK-VFKNPHVDTSFLPDREREAQMAREKSRLRQEWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLSTDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVFDDVRLIHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDPSKDYGDYTTHG 1259
            ++G HTVEG+ AG+RAA+LTK+RE QQ EYEAK++ I+   +RG +RI+  F     D  E+ FK +TVGLVTA EFRK RE+ +    S+  +E +  + +                           LSF       + G +  E+        KK + KNP+V+T  LPD+ER+ +  RE+ RLR EW   Q++IK E + VTYSYWDG+GHRR I + K TTVGK+LE V+QQL ++F+ELR  S++NL+Y+KEDLIIPH YSFYDLIVTKARGKSGPLFHFDV DDVRL+ D  VEKDESHPGKVV+R WYE++KHIFPASRWEVYD +     YT HG
Sbjct:    9 SSGAHTVEGNAAGSRAARLTKQREKQQKEYEAKRQDIETTNRRG-MRIDANFQTHQDDD-ESEFKRQTVGLVTAKEFRKKREDLQN-RKSSNVNEFLKEQQNGAKKKIKRKADSIGP------------LSF-------DIGDDNDEQLKATTTTIKKRIMKNPNVETGLLPDKERDKEETRERQRLRAEWEAVQERIKNENVAVTYSYWDGSGHRREITVPKQTTVGKYLELVKQQLVSEFAELRGVSAENLIYIKEDLIIPHHYSFYDLIVTKARGKSGPLFHFDVHDDVRLMQDRRVEKDESHPGKVVDRHWYEKNKHIFPASRWEVYDHNVARDKYTIHG 330
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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: D0NXI0_PHYIT (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=D0NXI0_PHYIT)

HSP 1 Score: 315 bits (807), Expect = 1.400e-101
Identity = 194/348 (55.75%), Postives = 240/348 (68.97%), Query Frame = 3 
Query:  231 TTGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFGGSATDQFEAMFKS-----KTVGLVTADEFRKAREEAEKVLPSAECSESVGTEGSAXXXXXXXXXXXXXXXXXXXXXXXXXTLSFGGDXXXGEEGGEGPEESSVGKGAAKKVFKNPHVDTSFLPDREREAQMAREKSRLRQEWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLSTDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVFDDVRLIHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDPSKDYGDYTTHG 1259
            ++G HTVEG++AG+RA+KL+K+RE QQ EYEAK+  I+   +RG  RI++ F  S  D  E+ FK+     +TVGLVTA+EFRK RE             ++    S+         XXXXXXXXXXXXX    LSF  D    +E      E +     AKK  KNP+V+T FLPD+ERE +      +LR EW  +Q++IK E + VTYSYWDG+GHRR I I K TT+GK+LE V+QQL T+F+ELR  S++NL+Y+KEDLIIPH YSFYDLIVTKARGKSGPLFHFDV DDVRL+ D  VEKDESHPGKVV+R WYE++KHIFPASRWEVYDP+     YT HG
Sbjct:    9 SSGAHTVEGNVAGSRASKLSKQREMQQKEYEAKRLDIEKTNRRG-TRIDENFQ-SHQDDDESEFKACLGDRQTVGLVTAEEFRKKRE-------------NLQNRKSSRVDVQSEEQXXXXXXXXXXXXXKMGPLSFDMDDNDADE------EETTRPTRAKKSIKNPNVETDFLPDKEREKEEXXXXXQLRVEWEVEQERIKNEDVAVTYSYWDGSGHRREITIPKKTTIGKYLELVKQQLMTEFAELRGVSAENLIYIKEDLIIPHHYSFYDLIVTKARGKSGPLFHFDVHDDVRLLQDRRVEKDESHPGKVVDRYWYEKNKHIFPASRWEVYDPNVVREKYTIHG 335
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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A6U3VLY5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VLY5_9STRA)

HSP 1 Score: 312 bits (800), Expect = 1.060e-99
Identity = 205/395 (51.90%), Postives = 259/395 (65.57%), Query Frame = 3 
Query:  204 EFHSGFKRDTTGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFG-GSATDQFEAMFKSKTVGLVTADEFRKAREEAEKVLPSAECSESVGTEGSAXXXXXXXXXXXXXXXXXXXXXXXXXTL-----------------------------SFGGDXXXGEEGGEGPEESSVGKGAA------KKVFKNPHVDTSFLPDREREAQMAREKSRLRQEWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLSTDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVFDDVRL-IHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDPSKDYGDYTTHGREVNEK 1277
            +F + F R  +GIHT+EG++AG+RAA LTKKRE     +E KK++I+ E +RG  R++ KF    +    E  F+  TVGLV+A+EFRKA  EAE++       E VG       XXXXXXXXXXXXXXXXXXXXXXX                                F       +    G  ++S G+G A      K++ K+P VDTSFLPD++RE  + +++ +LR+EW  +Q ++K E+LE+TYSYWDG+GHRRT    KG T+G FLE VR+ L+ +F E+   SSD LLYVKEDLIIP   +FYDLIVT+ARGKSGPLFHFDV DDVR+   D  VEKDESHPGKVVERRWY+R+KHIFPASRWEV+DP+KDYG YT HG EV +K
Sbjct:    3 DFVANFHRPESGIHTIEGNVAGSRAAALTKKREKDARAFEEKKQQIKHESERGRKRMDDKFNVDKSLSAAEQKFRRDTVGLVSAEEFRKATREAERLRRR----ERVGLGDDILEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGXXXXDFVNTTDENDTAESGSAKNSEGEGTASTTDGAKEIKKDPRVDTSFLPDKDREISIQQQREQLRREWHAKQSQVKNEMLEITYSYWDGSGHRRTSVCRKGDTIGNFLELVRKDLAKEFREMTNVSSDALLYVKEDLIIPQDITFYDLIVTRARGKSGPLFHFDVRDDVRMGALDVRVEKDESHPGKVVERRWYDRNKHIFPASRWEVFDPAKDYGTYTIHGGEVTKK 393
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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: F0W1H8_9STRA (Uncharacterized protein AlNc14C7G946 n=2 Tax=Albugo TaxID=65356 RepID=F0W1H8_9STRA)

HSP 1 Score: 310 bits (793), Expect = 1.800e-99
Identity = 180/343 (52.48%), Postives = 233/343 (67.93%), Query Frame = 3 
Query:  237 GIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQDEYKRGGLRIEQKFGGSATDQFEAMFKSKTVGLVTADEFRKAREEAEKVLPS--AECSESVGTEGSAXXXXXXXXXXXXXXXXXXXXXXXXXTLSFGGDXXXGEEGGEGPEESSVGKGAAKKVF-KNPHVDTSFLPDREREAQMAREKSRLRQEWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLSTDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVFDDVRLIHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDPSKDYGDYTTH 1256
            G+HTVEG+LAG+RAA+LTK+RE Q+ +YE+KK++I D   R   RIE+ F  +  D  +A FK +TVGLVTA+EFR+ RE    +L S  ++   SVG   +                           LSF  +    +   +     ++G+G  K++  KNP V+TSFLPD+ERE Q   E+ +L++EW + Q++IK E + VTYSYW+G+GHRR I I K TT+ K+LE V+Q+L  +FSELR  S +NLLYVKEDLIIPH +SFYDLIVTKARGKSGPLFHFDV +DVRLI+DA +EKDESHPGKVVER WYE++KHIFPASRWE+YDP      YT H
Sbjct:   12 GVHTVEGNLAGSRAARLTKQREEQRKDYESKKQEITDTNFRAS-RIEKSFE-THHDLEDAEFKRQTVGLVTAEEFRRKRE----ILQSRRSDVLASVGQSSTKPVEKKNARKRKPKASTL---------LSFSLEE---DTDADVLPTDALGEGRKKRMMRKNPFVETSFLPDKERELQEELERKKLQEEWEEDQNRIKNENVTVTYSYWNGSGHRREITIPKKTTIAKYLELVKQELVQEFSELRGISPENLLYVKEDLIIPHHFSFYDLIVTKARGKSGPLFHFDVHEDVRLINDARIEKDESHPGKVVERHWYEKNKHIFPASRWEMYDPMIKREKYTIH 336
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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A836CH50_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH50_9STRA)

HSP 1 Score: 601 bits (1550), Expect = 7.360e-213
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 1 
Query:    4 MCRPPQHPAGSVPVVACASGIVGACLVCVACLCWLQRQGCALPPRASDICEAGGRIHGAAFSLLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTSSMLQLGYHIVMVALFCQFYFKAYGGXXXXXXXXXXXXXXXXXGVAPLLSDDAGRAQCGXXXXXXXXXXXXXXDXXXXXXXSSGXD 1032
            MCRPPQHPAGSVPVVACASGIVGACLVCVACLCWLQRQGCALPPRASDICEAGGRIHGAAFSLLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTSSMLQLGYHIVMVALFCQFYFKAYGGXXXXXXXXXXXXXXXXXGVAPLLSDDAGRAQCGXXXXXXXXXXXXXXDXXXXXXXSSGXD
Sbjct:    1 MCRPPQHPAGSVPVVACASGIVGACLVCVACLCWLQRQGCALPPRASDICEAGGRIHGAAFSLLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTSSMLQLGYHIVMVALFCQFYFKAYGGXXXXXXXXXXXXXXXXXGVAPLLSDDAGRAQCGXXXXXXXXXXXXXXDXXXXXXXSSGXD 343
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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A9V3Y1_MONBE (Elongation of fatty acids protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V3Y1_MONBE)

HSP 1 Score: 202 bits (513), Expect = 9.830e-58
Identity = 115/232 (49.57%), Postives = 144/232 (62.07%), Query Frame = 1 
Query:  190 LLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSAN------------FSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCY--VETVNPTS-SMLQLGYHIVMVALFCQFYFK 840
            L+EP +++AS   ALYV A L     M  +K        RVYN  QV +  YM +GL               FS+ N +G N+A D R EYFV +HY SKFLD+ DT  IVLR+KD+Q SFLHV+HHATI   W  LL  GY  GT  +GA INS+ H +MYSHY  TSFG +NPLK+Y+T+ QI QF SC++HAV   +  ++T+ P   + LQ GYHI MVALF QFY K
Sbjct:   26 LVEPAVLVASG--ALYVIAALLLHKTMRNQKPMDLKGLMRVYNLVQVAVCGYMTYGLVQELFKADMINVFGLFSLPNVFGLNLAFDRRAEYFVLIHYLSKFLDFFDTLFIVLRKKDAQFSFLHVYHHATIGPIWGLLLYLGYGSGTAIFGAMINSMTHVIMYSHYFVTSFGINNPLKKYITTWQICQFYSCLMHAVVLVFSGLDTIYPPYLAWLQFGYHITMVALFTQFYNK 255
[Close]
BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A7R9TV67_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TV67_9VIRI)

HSP 1 Score: 194 bits (492), Expect = 2.460e-55
Identity = 100/195 (51.28%), Postives = 127/195 (65.13%), Query Frame = 1 
Query:  265 AMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 846
            AM  R A       RVYNA QVV+NAY+VW LS    + N +G N      T Y V +HY  KF+D++DT  I+LR+KD+Q SFLHV+HH+TI + W +LL  G+  G+ S+GA+INSL+H +MYSHY  TSFG  NPLK  +T  QI QF  C+LH + F  +ETV PT    LQ  YH+ MV LF QFY K+Y
Sbjct:   47 AMERRPAMGLQNVMRVYNAAQVVVNAYIVWLLSGEHMLPNLFGINKPYSDGTRYAVFLHYCCKFVDFLDTVFILLRKKDAQFSFLHVYHHSTIGIMWGFLLNIGHGNGSASFGAWINSLVHVVMYSHYFYTSFGFKNPLKPLITKFQIVQFYLCLLHVLVFLAMETVVPTQLGYLQFAYHVTMVGLFTQFYKKSY 241
[Close]
BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A6C0IAN3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IAN3_9ZZZZ)

HSP 1 Score: 189 bits (479), Expect = 1.470e-53
Identity = 96/196 (48.98%), Postives = 132/196 (67.35%), Query Frame = 1 
Query:  268 MSGRKAFHPLAFPRV-YNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQ-LSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 846
            M GRKA++ L +P + YN  Q++LN YMV+GLSA  S  N YG N+   A   YFV +HY SK+ D+ DT  I+LR K+ Q LSFLHV+HH+TI + W +LL  G+  GT S+G FINS+IH +MYSHYL TS G +NP K+Y+T  Q+ QF  C++H++A   VE + P   ++++L Y   M+ LF  FY K+Y
Sbjct:   37 MKGRKAYN-LKYPMLLYNNAQILLNVYMVYGLSAVVSYPNIYGINIPYTANLRYFVYIHYLSKYFDYFDTLFIILRGKEKQQLSFLHVYHHSTIGVIWGFLLYRGHGNGTASFGCFINSIIHLIMYSHYLCTSLGYNNPFKKYITRTQLLQFAVCLIHSLAVIGVEEIVPKKYAVIELIYQTTMLVLFSNFYVKSY 231
[Close]
BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A6T8JPX3_HEMAN (Elongation of fatty acids protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A6T8JPX3_HEMAN)

HSP 1 Score: 187 bits (475), Expect = 8.980e-53
Identity = 104/208 (50.00%), Postives = 132/208 (63.46%), Query Frame = 1 
Query:  235 YVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSIS--NPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKD-SQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 846
            Y+G   A R  M G+  +      +VYN  QV LN YM+WGL+    +   N +G N+   AR E+FV VHY SKFLD+ DTA I+LR KD  QLSFLHV+HHA+I + W  LL  G+  GT ++G  INS+IHC+MYSHYL TSFG  NP K+ +T AQ+ QF +CI+HAV     ETV P   +  Q  YHI M+ LF  FY K+Y
Sbjct:   30 YLGMIAALRRMMKGQAPYSLKLAMQVYNVIQVALNVYMIWGLAVVPRLEGFNIFGINMKYTARVEWFVYVHYLSKFLDFFDTAFIILRGKDRQQLSFLHVYHHASIGMIWGTLLYIGHGNGTAAFGCLINSVIHCIMYSHYLYTSFGLVNPFKKLITQAQLFQFATCIVHAVCVLAWETVLPRPLAWAQFVYHIQMLVLFGHFYRKSY 237
[Close]
BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: L1JCT3_GUITC (Elongation of fatty acids protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JCT3_GUITC)

HSP 1 Score: 182 bits (461), Expect = 7.950e-51
Identity = 97/196 (49.49%), Postives = 128/196 (65.31%), Query Frame = 1 
Query:  268 MSGRKAFHPLAFP-RVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQ-LSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 846
            M GR+ F  L FP +VYN  QV+LN YM+WGL +  + +N +G N    A+ EYFV VHY SKFLD+ DT  I+LR K+ Q L+FLHV+HHA+I + W  +L  G+  GT ++G  INS+IHC+MYSHY  TS G  NP K+++T AQ+ QF  CI+HA      ET+ P   +  Q  YHI M+ LF  FY K+Y
Sbjct:   39 MQGRQPF-VLKFPMQVYNLAQVILNVYMIWGLVSLSTPTNIFGINKQYTAQLEYFVFVHYMSKFLDFFDTLFIILRGKEKQQLTFLHVYHHASIGMIWGAMLYIGHGNGTAAFGCLINSIIHCIMYSHYFWTSMGYTNPFKKFITQAQLIQFAMCIIHACLVLAFETILPRHLAWAQFVYHIQMLMLFGHFYRKSY 233
[Close]
BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A813GTD0_POLGL (Elongation of fatty acids protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GTD0_POLGL)

HSP 1 Score: 184 bits (467), Expect = 9.810e-51
Identity = 104/216 (48.15%), Postives = 135/216 (62.50%), Query Frame = 1 
Query:  190 LLEPDLVLASALAALYVGATLAGRLAMSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFS-ISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTSSM----LQLGYHIVMVALF 822
            L+ P +V    L  L++ A  A    M+ RKAF    + +VYN  Q+++ +YMV+GL    S + N +G N   DA+ E+FV VH+ SKFLDW DT  I+L++   QLSFLH +HH TIP+ W YLL  G   GT  YGA++NSL H +MYSHYL TSFG  NPLKRY+T  QIAQF SC+LHA   C V  +  + +     LQ+ Y I MV LF
Sbjct:   12 LVSPSVVFV--LPVLWIFAVYALANCMTTRKAFEVKRYMQVYNVVQILICSYMVYGLMPCVSKLPNLFGINSEYDAQGEWFVFVHFLSKFLDWFDTLWIILKKNRKQLSFLHTYHHMTIPMVWGYLLHVGVGNGTTRYGAWVNSLTHVIMYSHYLWTSFGLENPLKRYITGWQIAQFYSCLLHA---CVVRALEESEAKQLAWLQICYQISMVYLF 222
[Close]
BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A6C0LC77_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LC77_9ZZZZ)

HSP 1 Score: 181 bits (458), Expect = 2.870e-50
Identity = 89/195 (45.64%), Postives = 125/195 (64.10%), Query Frame = 1 
Query:  268 MSGRKAFHPLAFPRVYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQ-LSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHA-VAFCYVETVNPTSSMLQLGYHIVMVALFCQFYFKAY 846
            M GR  +       +YN  Q++LN YMV+GLSA  S  N YG N+   +   YFV +HY SK+LD+ DT  I+LR K+ Q LS+LH++HH+TI + W +LL  G+  GT ++G FINS +H +MYSHYL TS G +NP K+Y+T AQ+ QF  C+LH+ V  C  + V    ++++L Y   M+ LF  FY K+Y
Sbjct:   53 MKGRVPYQLKVPMLIYNNAQILLNIYMVYGLSAVISYPNIYGINIPYTSNLRYFVYIHYLSKYLDYFDTLFIILRGKEKQQLSYLHLYHHSTIGIIWGFLLYRGHGNGTAAFGCFINSAVHLIMYSHYLCTSLGYNNPFKKYITRAQLLQFAICLLHSLVVICMEDIVPRRYALIELIYQTTMLVLFSNFYIKSY 247
[Close]
BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A6C0KBK2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KBK2_9ZZZZ)

HSP 1 Score: 178 bits (451), Expect = 2.220e-49
Identity = 91/192 (47.40%), Postives = 124/192 (64.58%), Query Frame = 1 
Query:  280 KAFHPLAFPR-VYNACQVVLNAYMVWGLSANFSISNPYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQ-LSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALFCQFYFKAY 846
            KA + L  P  +YN  Q++LN YMV+GLSA  S  N YG N+       YFV +HY SK+LD+ DT  I+LR K+ Q LS+LH++HH+TI + W +LL  G+  GT ++G FINS IH +MYSHYL TS G  NP K+Y+T AQ+ QF  C+LH++     E V P   ++++L Y   M+ LF  FY K+Y
Sbjct:   45 KAPYQLKVPMLIYNNVQILLNMYMVYGLSAVISYPNIYGINIPYTNELRYFVYIHYLSKYLDYFDTLFIILRGKEKQQLSYLHLYHHSTIGIIWGFLLYRGHGNGTAAFGCFINSAIHLIMYSHYLCTSLGYRNPFKKYITRAQLLQFAICLLHSLVVILFEDVVPRRYALIELIYQSTMLVLFSNFYIKSY 236
[Close]
BLAST of jgi.p|Trimin1|354422 vs. uniprot
Match: A0A809VLV8_9STRA (Elongation of fatty acids protein n=1 Tax=Parietichytrium sp. TaxID=1689869 RepID=A0A809VLV8_9STRA)

HSP 1 Score: 180 bits (456), Expect = 2.820e-49
Identity = 86/174 (49.43%), Postives = 118/174 (67.82%), Query Frame = 1 
Query:  310 VYNACQVVLNAYMVWGLSANFSISN--PYGFNVARDARTEYFVKVHYWSKFLDWVDTALIVLRRKDSQLSFLHVFHHATIPLPWAYLLQNGYAFGTVSYGAFINSLIHCLMYSHYLATSFGAHNPLKRYLTSAQIAQFLSCILHAVAFCYVETVNPTS-SMLQLGYHIVMVALF 822
            VYN  Q+V+ ++M WGL     I N  P+G N  RDA  E+FV VH  +KFLDW DT +++ ++  +Q+SFL VFHHATI + W++LLQ G+  GT +YGAFINS+ H +MY+HY  TS   +NP KRY+T  Q++QF SCI+HA+     E V P   + LQ+ YHI+M+ LF
Sbjct:  110 VYNIVQIVVCSWMAWGLLPQVDIFNLNPFGLNKQRDANIEFFVMVHLLTKFLDWTDTFIMIFKKNYAQVSFLQVFHHATIGMVWSFLLQRGWGSGTAAYGAFINSVTHVIMYTHYFVTSLNINNPFKRYITGFQLSQFASCIVHALLVLAFEEVYPLEYAYLQISYHIIMLYLF 283
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354422 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z3T7_9STRA4.440e-231100.00XAP5, circadian clock regulator-domain-containing ... [more]
D8LMC0_ECTSI3.230e-13866.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3HT52_9STRA2.580e-11754.42Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2M861_9STRA1.830e-11357.61Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2UBR5_9STRA8.900e-11054.55Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8C484_THAPS2.490e-10851.72Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A484DRV9_BRELC5.920e-10252.03Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
D0NXI0_PHYIT1.400e-10155.75Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A6U3VLY5_9STRA1.060e-9951.90Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
F0W1H8_9STRA1.800e-9952.48Uncharacterized protein AlNc14C7G946 n=2 Tax=Albug... [more]

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BLAST of jgi.p|Trimin1|354422 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CH50_9STRA7.360e-213100.00Elongation of fatty acids protein n=1 Tax=Tribonem... [more]
A9V3Y1_MONBE9.830e-5849.57Elongation of fatty acids protein n=1 Tax=Monosiga... [more]
A0A7R9TV67_9VIRI2.460e-5551.28Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A6C0IAN3_9ZZZZ1.470e-5348.98Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6T8JPX3_HEMAN8.980e-5350.00Elongation of fatty acids protein n=2 Tax=Hemiselm... [more]
L1JCT3_GUITC7.950e-5149.49Elongation of fatty acids protein n=1 Tax=Guillard... [more]
A0A813GTD0_POLGL9.810e-5148.15Elongation of fatty acids protein n=1 Tax=Polarell... [more]
A0A6C0LC77_9ZZZZ2.870e-5045.64Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A6C0KBK2_9ZZZZ2.220e-4947.40Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A809VLV8_9STRA2.820e-4949.43Elongation of fatty acids protein n=1 Tax=Parietic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_245contigContig_245:56872..61742 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354422|estExt_Genemark1.C_Ctg_2450006
CAZyGT22
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko03041
KEGG ReactionR06260
KEGG ModuleM00055
KEGG Pathwayko00510,ko00513,ko01100,map00510,map00513,map01100
KEGG koko:K03847,ko:K13119
EC2.4.1.260
GOsGO:0000160,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0007610,GO:0007626,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009628,GO:0009637,GO:0009639,GO:0009719,GO:0009723,GO:0009725,GO:0009755,GO:0009873,GO:0009892,GO:0009987,GO:0010033,GO:0010099,GO:0010114,GO:0010467,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0014070,GO:0016070,GO:0016441,GO:0016458,GO:0019222,GO:0023052,GO:0031047,GO:0031050,GO:0031974,GO:0031981,GO:0032870,GO:0034641,GO:0035194,GO:0035195,GO:0035196,GO:0035556,GO:0040029,GO:0042221,GO:0042752,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043331,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048519,GO:0048580,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051239,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070887,GO:0070918,GO:0071310,GO:0071359,GO:0071369,GO:0071407,GO:0071495,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901698,GO:1901699,GO:2000026,GO:2000030
Preferred namefam50a
Descriptionregulation of photomorphogenesis
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2894@1|root,KOG2894@2759|Eukaryota
Evalue5.81e-140
Seed ortholog2880.D8LMC0
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionXAP5 protein
Ec32 orthologEc-05_002220.1
TranscriptId354744
TrackFilteredModels1
ProteinId354422
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354422gene_18411Tribonema minus UTEX_B_3156 geneContig_245 56872..61742 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354422Trimin1|354422|estExt_Genemark1.C_Ctg_2450006Tribonema minus UTEX_B_3156 polypeptideContig_245 56921..61548 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18411_5exon_18411_5Tribonema minus UTEX_B_3156 exonContig_245 56872..57088 -
exon_18411_4exon_18411_4Tribonema minus UTEX_B_3156 exonContig_245 57830..58105 -
exon_18411_3exon_18411_3Tribonema minus UTEX_B_3156 exonContig_245 59230..59304 -
exon_18411_2exon_18411_2Tribonema minus UTEX_B_3156 exonContig_245 60055..60393 -
exon_18411_1exon_18411_1Tribonema minus UTEX_B_3156 exonContig_245 61318..61742 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_18411UTR3_18411Tribonema minus UTEX_B_3156 three_prime_UTRContig_245 56872..56920 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18411CDS_18411Tribonema minus UTEX_B_3156 CDSContig_245 61318..61548 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_18411UTR5_18411Tribonema minus UTEX_B_3156 five_prime_UTRContig_245 61549..61742 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18411 ID=mRNA_18411|Name=jgi.p|Trimin1|354422|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1332bp|location=Sequence derived from alignment at Contig_245:56872..61742- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAGCGGTCGACTCGAAGGCGTGGCGTACCTGATATTTGTGACTGGCGCAG
TAGCAGCAGCGCTTGAACGGAGGAGAAGAGCAGCTGTGCTCGAAATTTTC
AGCCAGCACGATTTTGTTGGCCACTTACTGCCTGACAGAGCAGCAGAGCA
GCAAAGCTGCTTTTTGAGGCTTCGTGCCGAGCAGGAGTGTGACCATGTCC
TCGGAGTTTCACTCGGGCTTCAAGCGCGACACCACCGGCATTCACACCGT
GGAAGGGAGCCTGGCGGGCAACAGAGCAGCCAAGCTCACCAAGAAGCGAG
AGGCACAGCAGGCAGAGTACGAGGCCAAAAAGAAGAAGATCCAGGATGAG
TACAAGAGGGGGGGGCTGCGCATCGAGCAGAAGTTCGGGGGGAGCGCCAC
GGACCAGTTTGAAGCCATGTTCAAGTCGAAGACGGTAGGACTGGTGACAG
CAGACGAGTTCAGGAAAGCGCGTGAGGAAGCCGAGAAGGTTCTGCCTTCC
GCGGAGTGTTCCGAGAGCGTGGGCACGGAAGGTTCTGCCGCGGCGGCGGC
GGCGGCGGATGCAGAAGCTGGCGGCGAAAAGAAGGGCAAGAAGAAGAAGA
AGAAGCCCGTGAGCACGCTGTCGTTTGGCGGCGATGACGAGGAGGGGGAA
GAGGGGGGGGAGGGCCCCGAGGAAAGCTCTGTTGGCAAGGGCGCAGCTAA
GAAGGTTTTCAAGAACCCGCACGTCGACACGTCGTTTCTGCCGGACCGGG
AGCGCGAGGCACAGATGGCCCGTGAGAAGTCACGACTGCGACAAGAGTGG
ATGCAGCAGCAGGACAAGATTAAGCAGGAACTGCTGGAGGTTACCTACAG
TTACTGGGACGGCACGGGCCACAGGCGCACCATCAAGATCACCAAGGGCA
CGACGGTCGGCAAGTTCCTGGAGGCGGTGCGGCAGCAGCTGAGCACTGAC
TTCTCAGAGCTGCGCGCTACGAGCAGCGACAACCTGCTGTATGTGAAGGA
GGATCTCATCATCCCGCACTCGTACTCGTTCTACGACCTGATTGTGACCA
AGGCGCGCGGCAAGTCGGGTCCGCTGTTCCACTTTGACGTGTTTGATGAC
GTCCGCCTCATACATGATGCAACGGTGGAAAAGGACGAGAGTCACCCCGG
TAAGGTGGTGGAGCGCCGCTGGTACGAGCGCAGCAAGCACATCTTTCCCG
CGAGCCGCTGGGAGGTATATGACCCCAGCAAGGACTACGGCGACTACACG
ACGCACGGGCGGGAGGTCAATGAGAAAAATTAGGCCGCAGCAGTGCTCAT
CGTCAAATAAAACAGGCTGCAGTGCCGCTCCC
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protein sequence of jgi.p|Trimin1|354422

>Trimin1|354422|estExt_Genemark1.C_Ctg_2450006 ID=Trimin1|354422|estExt_Genemark1.C_Ctg_2450006|Name=jgi.p|Trimin1|354422|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=363bp
MSSEFHSGFKRDTTGIHTVEGSLAGNRAAKLTKKREAQQAEYEAKKKKIQ
DEYKRGGLRIEQKFGGSATDQFEAMFKSKTVGLVTADEFRKAREEAEKVL
PSAECSESVGTEGSAAAAAAADAEAGGEKKGKKKKKKPVSTLSFGGDDEE
GEEGGEGPEESSVGKGAAKKVFKNPHVDTSFLPDREREAQMAREKSRLRQ
EWMQQQDKIKQELLEVTYSYWDGTGHRRTIKITKGTTVGKFLEAVRQQLS
TDFSELRATSSDNLLYVKEDLIIPHSYSFYDLIVTKARGKSGPLFHFDVF
DDVRLIHDATVEKDESHPGKVVERRWYERSKHIFPASRWEVYDPSKDYGD
YTTHGREVNEKN*
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mRNA from alignment at Contig_245:56872..61742-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18411 ID=mRNA_18411|Name=jgi.p|Trimin1|354422|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4871bp|location=Sequence derived from alignment at Contig_245:56872..61742- (Tribonema minus UTEX_B_3156 )
CAGCGGTCGACTCGAAGGCGTGGCGTACCTGATATTTGTGACTGGCGCAG
TAGCAGCAGCGCTTGAACGGAGGAGAAGAGCAGCTGTGCTCGAAATTTTC
AGCCAGCACGATTTTGTTGGCCACTTACTGCCTGACAGAGCAGCAGAGCA
GCAAAGCTGCTTTTTGAGGCTTCGTGCCGAGCAGGAGTGTGACCATGTCC
TCGGAGTTTCACTCGGGCTTCAAGCGCGACACCACCGGCATTCACACCGT
GGAAGGGAGCCTGGCGGGCAACAGAGCAGCCAAGCTCACCAAGAAGCGAG
AGGCACAGCAGGCAGAGTACGAGGCCAAAAAGAAGAAGATCCAGGATGAG
TACAAGAGGGGGGGGCTGCGCATCGAGCAGAAGTTCGGGGGGAGCGCCAC
GGACCAGTTTGAAGCCATGTTCAAGGTAAGCTCGACGGCAGCCATCCCGC
GAAAGCAGTCTGACATGTTGAAGCAGGGCCGTGGCGCATTGAGCTTGTTA
GCCAGGATTGAAGCATGGCGAATAGCGTCGTGTGCAGGGCTTGAACTGGT
ATGTGTCCATGTTTGCCATTGCCTCTGACTAAACGATCACCTAAGAGCTG
CTGGTATCTGAAGCAGCATGGCTCAATCTGCCAGGACCAACCTTCAGGCA
TGCCACAGTGCGGCTGGTAATCAAAAGCATGCATGCCGTTACTGACGGCA
TGGCTGAGTCAATATTTAGGCGCACGACCTGGTCACTGAATTGCGCAGAG
ACGCAGAGGCGTCGTTCATCCCTGATAACAATCACATCCCCTGTCACCTT
CAACACACAACCATCAGGCTATATGCCATGCTTCTGAAGCGAATTGAGTC
AATTCAATTGACTCAATTCCACCTGGACGCGTCACTGACATCCTTCATTT
TTGCTTGTCAGGCTTGCCACGACTTGGGGGCCGCTGTCGACGATGCATCA
CTGACTGCAGCTGCGCGCTTGCAGCAACAACATTGTGGTCGAATATACGT
AGATTCCCGTGTGCCCTGGCAGGCACACAGTGACAGCGCTCCGAGTGCCA
CCAGCACACCAATATCATTCCCCGTGCTACCTCACATTCATGCCTCAAGG
ACCGCACTTCAACTTCCATTTCTCAGATGATTTCTGTCACGGCGCCAGAC
ACTGACTAGCGTTCCCCGCGCTACACGCACGGTTTCATGCCTCAAACACC
GCTCTCTGGGCTTCTGCTGCTGTGACGCGGCTTGGAGCACCGACATCTTG
CCACGCGCAGTCGTTTTGAACCCGCATCTCTGCCTCTGTCGGCGCGGAGC
GCTGGCATCTGACTTGTGTGCGGTAGCCCTACCCCCCTCCCGTGTGCAGT
CGAAGACGGTAGGACTGGTGACAGCAGACGAGTTCAGGAAAGCGCGTGAG
GAAGCCGAGAAGGTTCTGCCTTCCGCGGAGTGTTCCGAGAGCGTGGGCAC
GGAAGGTTCTGCCGCGGCGGCGGCGGCGGCGGATGCAGAAGCTGGCGGCG
AAAAGAAGGGCAAGAAGAAGAAGAAGAAGCCCGTGAGCACGCTGTCGTTT
GGCGGCGATGACGAGGAGGGGGAAGAGGGGGGGGAGGGCCCCGAGGAAAG
CTCTGTTGGCAAGGGCGCAGCTAAGAAGGTTTTCAAGAACCCGCACGTCG
ACACGTCGTTTCTGCCGGACCGGGAGCGCGAGGCACAGGTGAGCCTGCAC
TTCAACTTCCACTTCATGTTTGAGTTGAAGTCTACCATGTGCACCACCTT
GAAGCTGTCGTTCTGCTTCTAAGCAAGGGCTTCTGCACTAGGCTAGGCCA
CAGTTCGTCTTCGTGTCAGTTTTGTGCTCAGAGCAGTTGGTATGTGTCTC
GGGCAAGCAAGAAGTATTTTGATTGAAGTGAAAATTGGTGGGGGGAGGGT
TGCAACTTCAACTTTCCGCAGATGTTTCCGAGCTTGAATGCGCGCACGGT
ATATGTTGTCGATGTTGGTGGTTCCAGCAACTTGTGCTACAATTGTTGCA
CTGTCTGCACTGCTTACGTGGCGCCAGGCATCGTAAACGAGTAGATGCCG
TGTTATTGGAACTGGAGTGTTGGCTGAAGTGAACGCCTGGTTCCCCTATT
ATCACCAACCCAGCAAGAGCAGACGCAAGCAGCACATGAAGCGTACTTCT
ACGCTGCGGATTGCCACCCTGTCGCACCGTGGTACTGTGCGTGCGCAAGT
GGCTTGTGAGAAAGCATGGCCGTGAAACGGTGGTATGGTATGTATCTATG
ATTCATCTCCCACCAACATATACCTGAAGTTTTATTAGCTACTTTATGCT
TTTCCTGGACCACATACATAGTTTCAACAAGTAACCACCTTTCGTGATGC
TTTTCTCTCCAATCACTACATTCAAAAGTGAATCATAACATCACTTCTGA
GTGCCAGAGTATTGCATCGCCTTGCTGTTCATGTGCAGATGGCCCGTGAG
AAGTCACGACTGCGACAAGAGTGGATGCAGCAGCAGGACAAGATTAAGCA
GGAACTGCTGGAGGTGAGCGCTGCCTTCTCAAACAGTCTTATTAAGTGCA
CCTCCCAAAAAGCGTTGTTGTTTATGACTAGAAGGCGTTTATCAGACACT
GTACTTCAAGACAGCTCTGGAGTGTATTGGTTCTTTTTTGCAGCTTCAAC
ATGAGTATGAGGTATGCACCGAGCTCGTCGCTTCTGTCAAACAACCAGCA
CTTGAAGGAAGCTTCAAACATTTTTTTTATGCTTGTCACATTTGCTTTGA
AGTGTGCCACTTCTGTTGACGTCACTGCGATTCGCCACGCTGCAAGTGAT
AGGCTTTCGGCACACTTGTTTTTTGATTGCTACTTCTTCTATGGTCATGT
GCCCTTGTTTACCACCAGTGTCTGTAACTGTTGGTATATAACTGTCGCTC
CCATCTGCACGCCCCCGCAGGTGATGTACAGTCACTGGCATACTTGCCGC
TCTTTGCCACTGTTGCATCTTTTTACCACATCTTACTATCGTTTGTTTTC
AGCAGTCTCCGTAACTGTCGTTCCCACCTGCGCGCCACCGCACACGACGT
TACTGGCTCCCTTACATGTTCTACACCTGCTACCTTCTCGTCCTTTCTAT
GCATATTTTCCTTGTTTCTCACCACTTTCTCCAGAACTTATCCCCGTCCG
CGCGCCGCCACGCGTGGTGTACATTTACCGGCACTGGCCCTAACCGCTGT
CTGTCACCGTCTGTAACTGGCGCTCGCAACCGCCGCGCGGCGCAGATGAC
CTACAGCTTCCAGTCTCTGTAACTGTAAATCTTGCTCCCATATGCGCGCC
CTGCAGGTGACTTACAGTTACTGGCACGCTAACACTCTATGTAGCTGTTG
CTATCCTTTTATCCTTTTTCTTTTTTCATGACTCTCACTTCTGTCCTCGT
GCGCCGCATGGAAAGCGTCACTGTCACAGCATGTAGAGGCGTGCAGGACA
TGTACTGTCAGCGGCATTACTTGCCGATTTTTGTAAGTGTTGCCTCGCGG
TGCAGGTGACCTACAGCTACTGCAACGTCATTGCCAACCTCCATGAGCGT
CATCTTTATACGCGTGCCGGCACTGGCACACTCACCAATTTTACCAACTG
TCTGTAACTGTCGCTCGTAACCACCGCCGCGGCGCAGGTTACCTACAGTT
ACTGGGACGGCACGGGCCACAGGCGCACCATCAAGATCACCAAGGGCACG
ACGGTCGGCAAGTTCCTGGAGGCGGTGCGGCAGCAGCTGAGCACTGACTT
CTCAGAGCTGCGCGCTACGAGCAGCGACAACCTGCTGTATGTGAAGGAGG
ATCTCATCATCCCGCACTCGTACTCGTTCTACGACCTGATTGTGACCAAG
GCGCGCGGCAAGTCGGGTCCGCTGTTCCACTTTGACGTGTTTGATGACGT
CCGCCTCATACATGTGAGTTCCTGAGGGGTATGTATGTATGTATGTATGT
ATTTACTGCTGAGCATCATCACCATATTATCAAGTAGCGTCGGCAAGTCG
GGGCCGCTGTTCCACTTTGATGTCTTTGATGACGTCCGCCTCATACATGT
GCGTGCCCTGAGGGGTATGTATGTACTGCGGAGCATCATCATTATATTAC
TCCATTTTCGAAAGTACGGGTAGCACCTCAAGTCCGCTGTTCCACTTTCA
CATCTTCGATGACGTCCGTGCTATACATGTGAGTGCCCTGAAAGGGCATG
TATGTATGTACTGCTGAGCATCATCATCATGTTGTCAACCAACGGTGACA
AGTCAAGACCACTGGTCCACTTTGGCTTGTTTTAGACGTCCGCCGGATAT
GGATGAGTGTGCGATGCTTATTGATATGCAGTCCATGTGGTAAATATTAG
ATTCTGAGTCAGTGCCTGCTATGTATGTGCCTAAAAATCAAGTTCATGTC
ACTGATTTGGGTGGGCGCGGCCTCTGTCGTGTGAGCGTACTCGCACAATT
GCCTCGGCTGAAGATGCCCCCCCCCCCCTCACCTATTGCAGGACGCAAAG
GTGGAAAAGGACGATATCACCCCGGTGCAGTACTGCTTTGCACATCACGT
CTTGTGAGTTTGGCCTCTGTCGTGAGTGTATTTGTTGACCCCATTGCCTT
TGGCTGACCCCCCCACCCCCCCACCCCCCCCCTCCCCCTCCTCTCCCATT
TCAGGATGCAACGGTGGAAAAGGACGAGAGTCACCCCGGTAAGGTGGTGG
AGCGCCGCTGGTACGAGCGCAGCAAGCACATCTTTCCCGCGAGCCGCTGG
GAGGTATATGACCCCAGCAAGGACTACGGCGACTACACGACGCACGGGCG
GGAGGTCAATGAGAAAAATTAGGCCGCAGCAGTGCTCATCGTCAAATAAA
ACAGGCTGCAGTGCCGCTCCC
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Coding sequence (CDS) from alignment at Contig_245:56872..61742-

>mRNA_18411 ID=mRNA_18411|Name=jgi.p|Trimin1|354422|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1089bp|location=Sequence derived from alignment at Contig_245:56872..61742- (Tribonema minus UTEX_B_3156 )
ATGTCCTCGGAGTTTCACTCGGGCTTCAAGCGCGACACCACCGGCATTCA
CACCGTGGAAGGGAGCCTGGCGGGCAACAGAGCAGCCAAGCTCACCAAGA
AGCGAGAGGCACAGCAGGCAGAGTACGAGGCCAAAAAGAAGAAGATCCAG
GATGAGTACAAGAGGGGGGGGCTGCGCATCGAGCAGAAGTTCGGGGGGAG
CGCCACGGACCAGTTTGAAGCCATGTTCAAGTCGAAGACGGTAGGACTGG
TGACAGCAGACGAGTTCAGGAAAGCGCGTGAGGAAGCCGAGAAGGTTCTG
CCTTCCGCGGAGTGTTCCGAGAGCGTGGGCACGGAAGGTTCTGCCGCGGC
GGCGGCGGCGGCGGATGCAGAAGCTGGCGGCGAAAAGAAGGGCAAGAAGA
AGAAGAAGAAGCCCGTGAGCACGCTGTCGTTTGGCGGCGATGACGAGGAG
GGGGAAGAGGGGGGGGAGGGCCCCGAGGAAAGCTCTGTTGGCAAGGGCGC
AGCTAAGAAGGTTTTCAAGAACCCGCACGTCGACACGTCGTTTCTGCCGG
ACCGGGAGCGCGAGGCACAGATGGCCCGTGAGAAGTCACGACTGCGACAA
GAGTGGATGCAGCAGCAGGACAAGATTAAGCAGGAACTGCTGGAGGTTAC
CTACAGTTACTGGGACGGCACGGGCCACAGGCGCACCATCAAGATCACCA
AGGGCACGACGGTCGGCAAGTTCCTGGAGGCGGTGCGGCAGCAGCTGAGC
ACTGACTTCTCAGAGCTGCGCGCTACGAGCAGCGACAACCTGCTGTATGT
GAAGGAGGATCTCATCATCCCGCACTCGTACTCGTTCTACGACCTGATTG
TGACCAAGGCGCGCGGCAAGTCGGGTCCGCTGTTCCACTTTGACGTGTTT
GATGACGTCCGCCTCATACATGATGCAACGGTGGAAAAGGACGAGAGTCA
CCCCGGTAAGGTGGTGGAGCGCCGCTGGTACGAGCGCAGCAAGCACATCT
TTCCCGCGAGCCGCTGGGAGGTATATGACCCCAGCAAGGACTACGGCGAC
TACACGACGCACGGGCGGGAGGTCAATGAGAAAAATTAG
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