mRNA_18402 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354441
Unique NamemRNA_18402
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|354441 vs. uniprot
Match: A0A836CI50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI50_9STRA)

HSP 1 Score: 657 bits (1696), Expect = 1.570e-238
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 1
Query:    1 MSTLSDVDASPYLEFLNEKAVAANPPRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVDGTKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLGYGVERYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKFNEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMDAVIFGYQDWDSVRAGLADMYQEAGMPELADFVKL 975
            MSTLSDVDASPYLEFLNEKAVAANPPRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVDGTKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLGYGVERYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKFNEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMDAVIFGYQDWDSVRAGLADMYQEAGMPELADFVKL
Sbjct:    1 MSTLSDVDASPYLEFLNEKAVAANPPRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVDGTKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLGYGVERYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKFNEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMDAVIFGYQDWDSVRAGLADMYQEAGMPELADFVKL 325          
BLAST of jgi.p|Trimin1|354441 vs. uniprot
Match: D8LGR6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR6_ECTSI)

HSP 1 Score: 363 bits (931), Expect = 2.330e-121
Identity = 176/325 (54.15%), Postives = 231/325 (71.08%), Query Frame = 1
Query:    1 MSTLSDVDASPYLEFLNEKAVAANPPRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVDGTKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLGYGVERYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKFNEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMDAVIFGYQDWDSVRAGLADMYQEAGMPELADFVKL 975
            MS  + VDA+ Y  F+ +KA   NPPRRL TLL+ LQ KG+ P DPADR GLNPF +P+    DG   GLLRWPT+PE L MP+VR+       +GL+LLA + +H+I+R+ AEEDF GS  + E+I L N GL ++   Y  G+V+ LG GVE+Y  L+V  F D+Y+WL  +HL KGD  +ALA+AEK NE+F+GWG PY  YA+VLA M  R+ EAKDAAKVSLRCPCWTI+ ++ +LE V +IAGY DM  V  +Y+ +A D Q  K  EGK+P Q+ALDRAAH+MDAV FG++DWD VR  LA+ Y + G+P++A FV++
Sbjct:   56 MSVDAGVDAARYTNFIKDKAKFPNPPRRLPTLLRFLQHKGLTPVDPADRAGLNPFLVPLVKGDDGVVTGLLRWPTSPETLEMPVVRNGE-----TGLELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADPLYEKGAVENLGVGVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAEKANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDGVREELAERYDQGGIPDIARFVRM 375          
BLAST of jgi.p|Trimin1|354441 vs. uniprot
Match: H6WBA3_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA3_VAULI)

HSP 1 Score: 354 bits (908), Expect = 3.530e-118
Identity = 166/313 (53.04%), Postives = 233/313 (74.44%), Query Frame = 1
Query:   40 EFLNEKAVAANPPRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVD--GTKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLGYGVERYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKFNEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMDAVIFGYQDWDSVRAGLADMYQEAGMPELADFVK 972
            EFL  KA  ANPP+RL TLL+L + K +  CDP DR+ L+PFFIP+A   D  G+K+GLLRWPTAP+   MPLV++NS      G++L+A D+D YI+R+A+EEDFK + ++++++ LAN GL ++ +PY  GS     +G++++Q+L + PFPD+Y WLV++HL++GD+ISAL  AEKFNE+F GWG+PYAFY++ L+ M GR  EA+DAAKV++RCP WT+T D AEL+++  + GY +  +V+ L++R+AED Q  KK EGK P QIALDRAAH+MDAV+ G   W  VR  L  +Y+EAGM  LA+FV+
Sbjct:   47 EFLKSKANVANPPKRLETLLKLFEIKKVETCDPNDRRNLHPFFIPLANSGDDFGSKIGLLRWPTAPDKFPMPLVKANS-----VGMELMANDIDMYIRRVASEEDFKETSISKDIVKLANEGLPENSKPYQGGSAANFKFGLQKFQLLNIGPFPDLYVWLVNSHLSRGDEISALTAAEKFNELFPGWGYPYAFYSKTLSRMKGRHLEARDAAKVAMRCPLWTLTLDKAELKSIFELGGYGNEIDVEVLHRRMAEDVQEDKKNEGKQPVQIALDRAAHVMDAVVVGRGTWGDVREELYGLYKEAGMSHLAEFVR 354          
BLAST of jgi.p|Trimin1|354441 vs. uniprot
Match: A0A836CDE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDE1_9STRA)

HSP 1 Score: 256 bits (654), Expect = 7.800e-83
Identity = 128/129 (99.22%), Postives = 128/129 (99.22%), Query Frame = 1
Query:   76 PRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVDGTKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLGYGVE 462
            PRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVDGTKVGLLRWPT PEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLGYGVE
Sbjct:   10 PRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVDGTKVGLLRWPT-PEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLGYGVE 137          
BLAST of jgi.p|Trimin1|354441 vs. uniprot
Match: W7U1F2_9STRA (Cyclin delta-3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1F2_9STRA)

HSP 1 Score: 229 bits (585), Expect = 2.410e-69
Identity = 135/314 (42.99%), Postives = 185/314 (58.92%), Query Frame = 1
Query:   40 EFLNEKAVAANPPRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVDGTKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLGYGVERYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKFNEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMDAVIFG---YQDWDSVRAGLADMYQEAGMPELADFVK 972
            +FL  +A    PP  LS L+QLL ++G     P++   L+P  IP+    D     LLRWPT  E   +P+V++  G S   GL+L+A        R+AAEED  G     E  A   N    +++ YV G+V+K+GYG+ERY  LKV  FPD+YK+L + H++KGDQ SAL TAEK    F GWG PY  Y ++L GM GR+ E +DAA  +LR P WT+  D  +LE V   A  S   +    + +L ED +  +  +GK P Q+ALDRAA++MDA + G    + W  VR  LA++Y+EAGM ELADFV+
Sbjct:   56 DFLQNEA-GIPPPSDLSALIQLLLYRGEESVFPSENTELHPLVIPLTKSGDEYTC-LLRWPTPQEGAPVPVVKARPGLS---GLKLVALSTLDLAHRLAAEEDH-GQGREAEWAASLVNAYLPAEKQYVRGAVEKVGYGLERYLFLKVGSFPDVYKFLTEFHMSKGDQASALVTAEKAYNTFNGWGQPYMEYCRLLQGMKGRELEMRDAAFAALRTPLWTVADDDGDLEMVLN-AAKSSREKAADKFWKLYEDERLQEVKQGKLPEQVALDRAAYLMDAALVGGNGIRSWSDVRPPLAELYREAGMRELADFVE 362          
BLAST of jgi.p|Trimin1|354441 vs. uniprot
Match: A0A7S3EKV4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKV4_9RHOD)

HSP 1 Score: 207 bits (528), Expect = 2.920e-61
Identity = 123/318 (38.68%), Postives = 186/318 (58.49%), Query Frame = 1
Query:   22 DASPYLEFLNEKAVAANPPRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVDGTKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVA-GSVKKLGYGVERYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKFNEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMDAVIFGYQDWDSVRAGLADMYQEAGMPELADFVK 972
            DA+ + E+L + A     P+ L +LL +L+ KG    DP+ R GL+PF IP+++D +GT  G LRWPT P  + +P+VR+  G     GL LL+T  +++IKR  AE D    P    V           +E  +A G V+ LG+G+ERY +LK+ PFPDIY+ L   H  KGD  SAL  AE+    F GW   + F+A++L     R++EA+DAA+ +L+ P WT+      L+ + +IAGY D   ++++++RLAED +  +  +GK   Q+ALDRAA++MD        WD ++  LA +Y E  + + A F+K
Sbjct:   28 DAAVFSEYLEDVA-NLKAPKYLRSLLDVLEAKGEKIGDPSKRAGLHPFLIPISSDEEGT-TGFLRWPTPPPDMEVPIVRNAKGEM---GLTLLSTGAENFIKRHMAELDSAAKPADVSV----------PEELQIAEGEVESLGFGLERYVILKIGPFPDIYEGLTRFHEIKGDMQSALVCAERSGVAFPGWARGHCFHARLLQRFN-RNSEARDAARYALQLPLWTL---GDSLQEMGQIAGYQDETSLQKIFKRLAEDERENEIKDGKPKEQVALDRAAYLMDYTYAAGGSWDEIKDELAALYNEGMVTDSASFLK 326          
BLAST of jgi.p|Trimin1|354441 vs. uniprot
Match: A0A0G4F8B7_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F8B7_VITBC)

HSP 1 Score: 209 bits (531), Expect = 9.580e-61
Identity = 130/345 (37.68%), Postives = 187/345 (54.20%), Query Frame = 1
Query:    4 STLSDVDASPYLEFLNEKAV---AANPPRRLSTLLQLLQFKGMAPCDPADRKG-LNPFFIPMATDVDGTK------VGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLGYGVERYQMLK-VAPFPDIYKWLVDAHLAKGDQISALATAEKFNEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEG-KAPAQIALDRAAHMMDAVIFG-----------YQDWDSVRAGLADMYQEAGMPELADFV 969
            ST     A  +L FL + A    A  P + L   + LLQ +G     P+  +G  +PFFIP+A +    +      +GLL+WP+APE + +P+VR        SG+ L++ D+   +KR A EED +G   A E + L N+ L +  E Y  G V +LG G+ RY  LK V  FPD+Y+ LVD HLAKGD  SA+  +EK+ +   GWG P A++A ++A   G    A+DAAKV+L+ P WT   D AEL     +A      E +  + R + DP+  +   G K    +AL+RAA +MDA++FG           Y  W +++  LAD+Y E G PE+A FV
Sbjct:   69 STSHSSVADEHLTFLRDVAAVPEATLPSKELPHFISLLQRRGYEVVSPSPSRGNFHPFFIPLARNTSADESNPSSYLGLLKWPSAPEDMPLPVVRPGP-----SGVSLVSFDIRSLMKRFAVEEDLRGDETAGETVQLVNS-LLNEGEGYELGDVHRLGLGLPRYLALKRVGRFPDVYEALVDLHLAKGDTYSAMVASEKYYKEVKGWGRPLAYHADLMATHRGNTEVARDAAKVALKLPIWTTAADDAELRRTVDLAADRSYDEYRDSFLRRSRDPRTEEIQRGRKLKYVVALERAAWLMDAMMFGLKSKTGGEGPVYVPWSAIKQQLADLYTEGGAPEMARFV 407          
BLAST of jgi.p|Trimin1|354441 vs. uniprot
Match: A0A2V3IY10_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY10_9FLOR)

HSP 1 Score: 201 bits (511), Expect = 1.710e-58
Identity = 123/314 (39.17%), Postives = 176/314 (56.05%), Query Frame = 1
Query:   34 YLEFLNEKAVAANPPRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVDG-TKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLGYGVERYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKFNEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMDAVIFGYQDWDSVRAGLADMYQEAGMPELADFVK 972
            Y  +L + A   +PP  L  LL  L         P+ R  L+PF IP+  D++     GLLRWPT P+ + +P+V+S S   PS  L+L+A     Y+ R  A  DF G+   R  +  A +        Y  G V + G G+ER+ +LKV PFPDIY+ LV+ H AKGD  SAL T E+      GWG  +AF+A  L  + GR+ EA+DAA+  L+ P WTI      L+ +  +AGY D   + ++Y+RL ED +  +  +GKAP Q+ALDRAA+++D        W+S++  LA +Y EA MP+ A FV+
Sbjct:   42 YERYLTQVA-KTSPPPYLDGLLHALSASSTRFTPPSIRTDLHPFLIPLVYDIESEVTTGLLRWPTPPDEMDLPIVQS-SPRDPS--LKLIAPSAKSYVTRQLASADFAGNYEVRNSLRSACSLAL----AYQNGDVDQSGVGLERFLILKVGPFPDIYEGLVEFHKAKGDTQSALITCERSANAHPGWGRAHAFHANFLREL-GREMEARDAARFCLQMPLWTIGSVETLLD-MASLAGYEDSTSLCKIYKRLYEDDRKQEIADGKAPQQVALDRAAYLLDVCFTDGSGWESIKEDLAALYDEADMPDFATFVR 345          
BLAST of jgi.p|Trimin1|354441 vs. uniprot
Match: A0A388LIN2_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LIN2_CHABU)

HSP 1 Score: 192 bits (487), Expect = 3.770e-53
Identity = 127/347 (36.60%), Postives = 186/347 (53.60%), Query Frame = 1
Query:   19 VDASPYLEFLNEKAVAANPPRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATD-VDGTKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQ-----LLATDVDHYIKRIAAEEDFK-------------------GSPMAREVIALANNGLWD-SQEPYVAGSVKKLGY-GVERYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKF--NEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMDAVIFGYQDWDSVRAGLADMYQEAGMPELADFVK 972
            VD   +  F+ + A    PP  LS LL++LQ KG  P  P+DRKG+ P  IP+ ++   G    LLRWPT PE L MPL+R   G+    G       LLA  VD ++ R   EED +                     P+ +E     +    +  ++ YV GS  K     V+ Y   KVA FPD+ + L   HL +GD +SAL  AE +   + F G+G P+ F A++   + GR AEAKDAA+V+LRCP WT+    +  E +  IAGYSD   ++ L +RL E+ +    T+GK+P Q++LD+AA ++D       +WD VR  L D+Y+ AG+ +L++F++
Sbjct:  181 VDEREHAMFIQDVA-KITPPATLSVLLRVLQAKGEVPASPSDRKGILPLAIPLTSNPTTGDITALLRWPTPPEGLEMPLIRLRKGNQGEGGAGVGCPILLAKTVDDFVHRCLVEEDARLHNQPSSTSTTSDQLSSPNNQPLPQEDSVNVSTAAGEVGEQLYVKGSFSKSNLPSVDVYLTRKVALFPDVLERLALGHLDRGDHVSALVAAEFYCSRKHFPGFGRPFGFNAELFVRI-GRLAEAKDAARVALRCPWWTL---GSSFEEMADIAGYSDE-RIELLKERLTEEARQEDITKGKSPEQVSLDQAAFLLDTAA-AEGNWDDVRDQLGDLYKHAGLTDLSNFIR 520          
BLAST of jgi.p|Trimin1|354441 vs. uniprot
Match: D8QQP7_SELML (Uncharacterized protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QQP7_SELML)

HSP 1 Score: 187 bits (474), Expect = 1.240e-52
Identity = 118/306 (38.56%), Postives = 179/306 (58.50%), Query Frame = 1
Query:   73 PPRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVDGTKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVK--KLGYGVERYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKF--NEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMD-AVIFGYQDWDSVRAGLADMYQEAGMPELADFVKL 975
            PP +L  LL +LQ KG     P  R+GL+P  IP++ +  GT   LLRWPT PE +A+P+V  +       GL LL+  V+ Y+++I  EE+  G   A    A+A+ G    + PY  G  +  KL  G++ Y M KV  FPD+++ L   HL KGD++SAL T E +   + F G+G P  F A+++  + GR +EAKDAA+++L+ P WT+     E E V  IAG+ D  +V+ + +++ E+ +  +  +GKAP Q+ALD+AA ++D   + G  +WD +   LA  Y EAG+  +A FV L
Sbjct:   13 PPTQLQMLLDVLQAKGEQVVSPEKRQGLHPLAIPLSQNSTGTITALLRWPTPPEGMAIPVVEVHK-----YGLCLLSKSVEQYLQKILVEEEVHGRGDACYSAAVASAGGDPDRVPYKRGDFENSKLA-GLDVYLMKKVGLFPDVFERLALKHLEKGDEVSALVTGEFYVTKKHFPGFGRPLVFNAELMLKI-GRKSEAKDAARIALKSPWWTL---GCEYETVAEIAGWGDE-KVEYMREKMTEEGRKEELNKGKAPEQVALDQAAFLLDLGTVDG--NWDEISEKLASFYTEAGLDTIAKFVAL 305          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354441 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CI50_9STRA1.570e-238100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LGR6_ECTSI2.330e-12154.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
H6WBA3_VAULI3.530e-11853.04Uncharacterized protein n=1 Tax=Vaucheria litorea ... [more]
A0A836CDE1_9STRA7.800e-8399.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U1F2_9STRA2.410e-6942.99Cyclin delta-3 n=2 Tax=Monodopsidaceae TaxID=42507... [more]
A0A7S3EKV4_9RHOD2.920e-6138.68Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A0G4F8B7_VITBC9.580e-6137.68Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A2V3IY10_9FLOR1.710e-5839.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A388LIN2_CHABU3.770e-5336.60Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
D8QQP7_SELML1.240e-5238.56Uncharacterized protein (Fragment) n=1 Tax=Selagin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_247contigContig_247:103654..112895 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354441|estExt_Genemark1.C_Ctg_2470012
Max annot lvl2759|Eukaryota
EggNOG OGs2CMYK@1|root,2QST0@2759|Eukaryota
Evalue2.06e-121
Seed ortholog2880.D8LGR6
Hectar predicted targeting categoryother localisation
TranscriptId354763
TrackFilteredModels1
ProteinId354441
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354441gene_18402Tribonema minus UTEX_B_3156 geneContig_247 103654..112895 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354441Trimin1|354441|estExt_Genemark1.C_Ctg_2470012Tribonema minus UTEX_B_3156 polypeptideContig_247 103688..112895 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18402_7exon_18402_7Tribonema minus UTEX_B_3156 exonContig_247 103654..103825 -
exon_18402_6exon_18402_6Tribonema minus UTEX_B_3156 exonContig_247 105034..105252 -
exon_18402_5exon_18402_5Tribonema minus UTEX_B_3156 exonContig_247 105877..106033 -
exon_18402_4exon_18402_4Tribonema minus UTEX_B_3156 exonContig_247 107552..107661 -
exon_18402_3exon_18402_3Tribonema minus UTEX_B_3156 exonContig_247 108822..108992 -
exon_18402_2exon_18402_2Tribonema minus UTEX_B_3156 exonContig_247 110754..110879 -
exon_18402_1exon_18402_1Tribonema minus UTEX_B_3156 exonContig_247 112839..112895 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_18402UTR3_18402Tribonema minus UTEX_B_3156 three_prime_UTRContig_247 103654..103687 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18402CDS_18402Tribonema minus UTEX_B_3156 CDSContig_247 112839..112895 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18402 ID=mRNA_18402|Name=jgi.p|Trimin1|354441|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1012bp|location=Sequence derived from alignment at Contig_247:103654..112895- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCACTCTCTCGGACGTGGATGCGTCTCCTTACTTGGAGTTTCTCAA
CGAAAAGGCGGTGGCAGCCAATCCCCCCCGGAGGCTCTCAACGCTGCTCC
AGCTGCTGCAGTTTAAGGGCATGGCGCCCTGCGACCCCGCTGACAGGAAG
GGGCTCAACCCCTTCTTCATCCCCATGGCCACGGATGTAGATGGCACCAA
GGTAGGGCTGCTGCGCTGGCCCACAGCTCCCGAGCACCTGGCGATGCCAC
TGGTGCGCTCTAACAGCGGCAGCAGTCCCAGCAGTGGCCTGCAGCTGCTG
GCAACAGATGTGGATCACTACATCAAGCGCATAGCGGCGGAGGAAGACTT
CAAGGGATCGCCAATGGCGCGTGAAGTGATTGCTCTCGCCAACAACGGGT
TGTGGGACAGCCAAGAGCCATACGTGGCTGGTAGCGTCAAGAAGCTGGGC
TATGGCGTGGAGAGGTATCAAATGCTCAAGGTGGCACCCTTCCCCGATAT
TTACAAGTGGTTGGTGGACGCACACCTGGCCAAAGGCGACCAGATCAGCG
CACTCGCGACGGCAGAGAAGTTTAATGAGGTGTTTCTGGGATGGGGGCAC
CCATATGCGTTCTACGCCCAGGTGCTGGCGGGCATGACCGGCCGCGATGC
GGAGGCGAAGGACGCAGCCAAGGTGTCTCTGCGGTGCCCCTGTTGGACGA
TAACGCGCGACGCTGCGGAGCTGGAAGCGGTATGCCGCATTGCGGGCTAC
AGCGACATGGGGGAGGTCAAGCAGCTGTATCAGCGGTTGGCGGAGGATCC
GCAGCATGGGAAGAAGACAGAGGGAAAGGCACCTGCGCAGATTGCGTTGG
ATCGCGCGGCTCACATGATGGATGCCGTCATATTTGGCTACCAAGATTGG
GACAGCGTGAGGGCAGGGCTAGCAGACATGTACCAAGAAGCAGGCATGCC
TGAGCTGGCCGACTTTGTCAAGCTTTAATGACATTAATAACAATCACACA
ACTTCTTCAGTA
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protein sequence of jgi.p|Trimin1|354441

>Trimin1|354441|estExt_Genemark1.C_Ctg_2470012 ID=Trimin1|354441|estExt_Genemark1.C_Ctg_2470012|Name=jgi.p|Trimin1|354441|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=326bp
MSTLSDVDASPYLEFLNEKAVAANPPRRLSTLLQLLQFKGMAPCDPADRK
GLNPFFIPMATDVDGTKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLL
ATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLG
YGVERYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKFNEVFLGWGH
PYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGY
SDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMDAVIFGYQDW
DSVRAGLADMYQEAGMPELADFVKL*
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mRNA from alignment at Contig_247:103654..112895-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18402 ID=mRNA_18402|Name=jgi.p|Trimin1|354441|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9242bp|location=Sequence derived from alignment at Contig_247:103654..112895- (Tribonema minus UTEX_B_3156 )
ATGAGCACTCTCTCGGACGTGGATGCGTCTCCTTACTTGGAGTTTCTCAA CGAAAAGGTGCGCTCTTGCATCCCTATACAAGATTTGGGCCGCCGTGCAG CATGGTTGGCATGACGCGACACCGACATCATGATCTTTGTTGTATACTTG CAAGGAAACTATCCTGTCGTCTGTCGCAGCAGTGAAGGCCTGTGCAAGTG CGAGCGCACTGCTCTGATGTACTCGCCAATGGCAGGGCGCTGAAACTTTG GAAGGCATTGCCTTGTCCTTGCGCAGCTTATTTGTCTCCAACTGCCTAAG CAGTGCCAGGTGATTATGCTCGACAATGCTGTGCAGTGGCCTGGCAGACA TCATGTTTCAAGCGATGGCACTGAATGTGTGAAGCGCCAATGGGACTGCT GCAATGCGGCTCTGCAATTGAAAGATAAGGCTGGCGTCGTGCTTGATGGA GAGCTTCCTTTTCAGGGATCCGTGTCAGGGTCAGCTTCGGTCATGGCTGG TGCGTATCATGCTGCATGCCCACAGTGCATTAGACTTGAAGAGTAATTGG AGTCTGTTGAATATTCACGTTTTTAGACCCAAGCTCTGTGGTGTCCCTAT GCAAATTAAGGCGGCCGGTGTATGAGTGTACCAATCTATGAAAATTGAAA AACCGAATTGATCCTGATGTATATGTTATGATTAGGTTTAGCCCCTACTC CATCAAAAACGCACCCTACTCCACCAAAAACGCACCCTACTCCAAGACCC AACACCATTTCTGATTCCCGAAGATACCTAGCGTTTAATGTCTCTGATAC AAGCTGGTATTGATGAGTCAAGTAGGATGATGCCACAGTTTTGCCATTTG CTGAAATCGATTTTTTTGTGTCAAGTGTATTTATTTGTACCAGGACTAGC ATGATCCTGAAGGTAAAATGAAACAATACATTCGGCTTGAAAACATTATC TCCTTTGAAGGGTAAGGTGATAAACGACGGTTGAAAAAGCAACCAAGCTT TGATACATGATCTACGAACACGGTTTCAACGAGGTTGTGGTGGATTGTGG TGCTGTGCATTGAGAAAGACCAGTCTTCCGACACATGACAATGTGACAGG TGGGTTTCACAAGTTTCGACAAACCAAACTTGGTTTCCACTGTGGTGATG GATGACACAAAAAACAGTTGTACACCCCTGTGAGCGCTAAAGAAATAGAA GTACATTGAAACGACATGCTGGTCAAGCACGTCCATCTTGTCGAGCAATG GTGGGCAATGCAGTGAAAGGTCATGCAACTGCATGAGCCTCCAACCCTGC GATCCTCTTTCCACAATGCTGTCATGAAATGTGCTGGTGCAAATTTATCA CGTGGCGCTCTTGCTGACTTTGCCGCTATGGCAGGTTGTAAGTAATGGCT GAAGCAGACCATCTGCTTGGCTGCGTGGTTCACCTAAGCGTAGCGGACGT GTGCTTGCATGTACCGACGCGGCACTGCGGCTGTTACTTTTGTTGCTACT GTCATCCAGGCCATGTTCGTTTGTACCCTGACATCCACAAGAACAACAAG AGGTGTAAATCTCAGGAATTGATGATCTGTCCGGTCATCGCCTGACTTCA TTTGTTTCGCAATTGTGAATGTATCAATCACTCATTTGTAAATACAATGC TCTTGGCATCCGACCCTCAAGCACGCACGCCATACTGCTGTACATGTTTG ATTTATCTCGGCTGATGTGTGCTCCTGCGCTGTGCGCTGCTCCAGGCAGT GGCAGCCAACTTGAAGGTGTGGTTAGTCGTCAAATTTAATGCCTTCCACC GATGCATGTGGTCGCCGCTGCTGCCGCCATTGGCCACGAGTCAAACAGTG GCACCACATCCACAGTAGTCAAAATACTCATGTGTCTTCGATCTCAGCTG GTGTGTGCTCCTGCACTGTGCACTGCTGCAGGCGGTGGCAGCCAACTCTA CTGTTATACTTCAAGTACCTGTTTGATCTCAGCTAATGTATGCTCCTGCG CTGTGCACTGCCGCAGGCGGTGGCAGCCAATCCCCCCCGGAGGCTCTCAA CGCTGCTCCAGCTGCTGCAGTTTAAGGGCATGGCGCCCTGCGACCCCGCT GACAGGAAGGGGCTCAACCCCTTCTTCATCCCCATGGCCACGGTATGTAT GTATAAGACATATGTCATGCCACTGCATCTCATGCCACCGCATCTCATCC TCATCCCTGATTGCTTTGTGTAGCATTGCTGCTATGCCCCACTCTCACAA TGTTCAAGGCTGTTGCAGCAGATTGTTACTGCACACCAACCCCTTCTTTA TCCCCATGGCCACGGTATGTATGTATGTCATGCCACCAAATCCCATCCTG ATTGCTAGGGCTGGCAAAAACCGTATGTTGAGACAGGAAGGGGCACAACC CCTTCTTCATCCCCGTGGCCATGGTATGTATGTAGTCTATGCCACCACAT CTCATCCTGACTGCTTTGTGTAGCATCGCTGCTATGCCCACTCTCACAAT GCAAGGCTGTTACAGCAGTTGGTTACTGTGCACCCTGTGTAGCATCGCTG CTATGCCCCAATCTCAAAACTTTTCATGCTGTTGCAGCAGATAGTCGCTG TGTTGCTTTTCCTTCTTCTGAAGAGACATGCCACATTAGTCTACCACTGC GTCTGAATCCACAACCGGTCGCTGTTGCTTTAGTATGCGATATCTCATCT ATCGTGGTGATAATCGTGCATCTGTTCACCAACAGTGCCATTTCAAAGTT GAAGACGAAGCTGTGAGTCTGAGGCAGTGCACCCTCTTTGTCATCTCAGG GGCGGCTAAGCACTGCGCTCTGCCCTGCTGCAGAAACAGAAACAGCCTGG CTAGTTATTGCTGCATATTGTCTTGTGTGATTTCCATTGCTGTCATGCTG CACCGTGCGTGGCGCCCATGCATTCGCTGATAGTTTCTAGCTCAGAACAC ATCATGAAAGTCCATGCCATGCACTCGTAATACGCTGCTCTTGTGCTTGC GGCTGTGAACAACACCTGGGTAGGGCTGCTGCCTTGCCCTAACTTAGCGC TGTGTTGCTGTGCTTGAACTTGAGGTGCACAGCTCAATTCAGCGTTTCAG GTGCTCTGATGCCGTTGTTTTCTCCATAGGATGTGGATGGCACTTCACGT TTTTTTTTGTTTTTTTCACGCGCATCCACCTACCCCTTCTCTAATCAGGC GCAAGTATTGCGTGTGCGTCAAGTTGAAGTGTCGAACTGACACTTGAAGG TACTCTTGGCGTGATCTTCTGTCTATAGGACATGGATGGCACCAATGTCG GGCTGCTGCGCTGGCCCACAGCTCCGTGCCCCTGTCGCTAGTTTACATGT GCTTGAAGTTGAAGTGTACAACTGAAGTTTTGAACGTGACACACGCACTG AACAGTCACACCTAAAAATGAGATGCAAAGATGATTATTATCGTTGCTGT TTCCATAAATGTCATTTTTGTAACTTAATTCTTTTTTAAAATTAATGAAA ATCCCTTGCTGCTCTTTTGCATGTAGGGTGTAGATGGCACCAAGGTAGGT ATTCTTGGTGCACCTGACGTACCTTACCCTCACCCGGCATTACTTTACAC ATGTGCTTCAAGTTGAAGTGTACAACTGAAACTTGAACCTACTCTTTGCC TGATCTTCTGTATGTAGGATGTGGATGGCACCAAGGAAGGGCTGTTACGC TGGCCCACAGCTCCCGAGCACCTGTCGCTAGTTTACATGTGCTTGCAGTG GAAGTGTACAACGACACACACACACTATTCGGTTACACCTAACAATAAGC TAGATACAAAAATGACTACAATTGTAGCTGTTTCCAAAAAAATTGTAGCA TATGATATATATTTCTAATAATGCTTTATCTCTTGCTGCTCTCTTGCATG TAGGATGTAGATGGCACCAAGGTAGGGCTGCTGCGCTGGCCCACAGCTCC CGAGCACCTGGCGATGCCACTGGTGCGCTCTAACAGCGGCAGCAGTCCCA GCAGTGGCCTGCAGCTGCTGGCAACAGATGTGGATCACTACATCAAGCGC ATAGCGGCGGAGGAAGACTTCAAGGTGAATATTCAAACTTCAAGTATGTG CATCAAAATTAATGAGGGGGCGCAACGAAAAACTACCACAGTACATACCA TCAAAAAAACTTTAAATACATAGAAGCACGATTTTGTGGCATCGAATTGA GAAATTGCACCAATACCAGCACGAGAGACTAAGGAACAATAAAAGATGAA CATATCACATTCATAAACATATCACTCGCGAACATTGTAAGAATATACAT GAGTCAGGTAAAATAACATTTCATTAATGGGATAACTGTTGGTCAATATA CGTGCACGCTCAGGTTTGCACAGGTTTTGTGTTGAGCAGGGGTACGGCGC ACGTATTGAAGTGCAGCCATGAAAATGATGGCAGCAGTCCGAGTTGTAGC CAACAGGTGGGGAGCAATAGATCAAACGCACATGAGGACTTCAAGTTCCG CAAGTTCATGTTGAAGACCGGCGACGACTGCTTGAACAACAGCATGCGCT TCAGAATGTGAATATATGGCGTGCAATGCTGCTTGTTAGCGAGCATTGCA GGATCTTGCCCACAGTTGCTCCCGTATAACCCAGCTGAGAGCATGTATAG TGTTAGTGAGCTGTTCAGACGCGGTGAGACATGCGAGTCTGAATACCTAG TTCACTTAACGTAAGCAGTCATAGTTAAATATGGTGTGGTTGACATGTGT TTTTGCAAGAATTTCACAGACGTCATTGATGTTGTGGTATTTGAAGTCAA AAATGTGCGTTGACATGGCGGCATGCCACCATACTACATGTGCGCAGACC GACAGTGCAGAAGGACATTATGAAAAAAACTCCCAATTCAAACAAGTGCG GGAGTTCACGCACAGTTGGCGCTTATAATTAACCCCACACTTCAGCTCAA TTGTCGATCTATCTGATGCCCTGCTCAGCGCTCAAATCCATCTGATTAAA GTCGCCGCCAAAACCATACATACCCATAGTGGACCTCATGCGCTGCCACT CTATTGCTCATTCGTTATCATCGCACACGCTACCCAAGTACGCAAGCTCA AAAACCTGCAGTGAAAGCACATGCGGCAAGGGTATGTAGATATCTCGTAC CCCAACTCATCTTTCCACCTACACGTACACTCTGAATCAAATCCCGTTTT ACACGTGTGCGAATGCCCTGTTGCTCCACTGCAGGGATCGCCAATGGCGC GTGAAGTGATTGCTCTCGCCAACAACGGGTTGTGGGACAGCCAAGAGCCA TACGTGGCTGGTAGCGTCAAGAAGCTGGGCTATGGCGTGGAGAGGTATGT GAATCAATTGATGGCTTTGCACTGCTGAAGTTGAAGGTATACCCTGCATT TGAAGTTGTGAATAAGTGGATGTGTCTCTGACAGTGTTCTGAGCCGGTCA CACCAAGCGACCAACCGGCTTGCATGAGGACTGACAGGCTGAGCCGGTCC AGACAAGGCCACCGAAACCGGTCAGCTGAGCTGATATCTGCTTACAACAC TAGTCTCTGAGCACTGCTGAAGTTGAAGCTTGGCACTGCATTTGAAGTTG TGACTCGTCAAGCACCACTTGAGTACATCGTTGTGGTGCATTCACGTGAT ATACGCATTTGAACAGGCGGCGTGAAGAAGCTGGGCAACATGTGGAGATT GGAGTTTGGGCAGATCGTATGTAGTTAGTTACAATTATGTTTCAGCACCG GTTATGGAGACTTTTTCGTGGCAGACAATGTAAAGGGAATGGGCTGCGGC CTCCCTGATATACTGCGAGGTATAGGCACTCAACTCTAACCCTTTGCCTG ACTTGGGCAGTCTGCCTGAGATGCCAGACATGACACCGCAACCTGCGACT TCCCCCTCTTTACCATGTGTGGCTATGTGCCCTGCGGCAAGTGGAATAGT TTTAGGCTGCAGCCCGCATGCATGTTTTCATATGCTCTGAATAATATGCA TGTATATTTGCTGCCTGCGGCAGCAGCCTAGCAAGCTGCTGCTCACTAGT ACACATCCAAAGAGAGGGCTTTTCGCGCCCCTTGCGAAGTGAAATAAATA CAAGTACATCAACGTGACTTTCAATCGTGCCGCTGCTAGATTGTGGATGT ATGTAGTTTGTCCACTGGCATGTGGAACTGCCATAACTGCCACAACCGCC GGCGTATCGCGGCCATGAGAGCATGTAACGGTCATCATGCCCTAATAATG GAAACATCAACACCTGCTATAGCAGAACTGACAGAGCCCTAGGTATGCAT CAGATCTGCTGATTTGGTCACCTGTTCCCTAATTTTGAGTCCAGCTGCCT GATGCCGAGGCTTGTCAGAACTGTCTTTGTGCCAATTACAGTACCGTGTT GTGATGCCAAAGATGGATGAACTGGACTTCAGATTGCAGCTGAATTAAAG TCAATGTTCTTGCACACATTTTGTGCGTGGGTGCGGCCCATGGCACATTT ATTATAAGTTTTGAAACTTTTTATTTTGGGGTCATGCTGACACACACATG GGCGTTGGGGTCAACAGAACAAGTTTTAACATTGCAATAAATGTGACTCA GTATACTTGCTTGCCCCCCCCCAACCCTTGTCGCGTGTCCCGCTGATGTA CTTGTTGGCACTGGCACTGCGTACACTTCTGCCGAAATCACTGTTTCCCC CCGTTGACCCGATACATGCAATGTCTTGTTGAGCCAGGTATCAAATGCTC AAGGTGGCAGCTGCTGACACACATCGCCACTGGTGCTGCTCAAGTACTTT GATGAAATCACTGTGTCCCTCACAATTCCGGCAATTGCAATGTCTTGTTA TTATTGAGGCAGGTATCAAATGCTCAAGGTGGCACCCTTCCCCGATATTT ACAAGTGGTTGGTGGACGCACACCTGGCCAAAGGCGACCAGATCAGCGCA CTCGCGACGGCAGAGAAGTTTAATGAGGTGTTTCTGGGATGGGGGCACCC ATATGCGTTCTACGCCCAGGTGCGTTCATTGGCGCATTGTTGAAGTGTGA CTTGCAGTACACACTGTCTGCGTTCTACGCCCAGGTGCATTCACTGGTGC TTATTGTTGAAGTTTAGTACTTGAATTATATTTTTAAGCTGGGGCACCCG TATGCATTCTCCGCTCAGGTGCGTTCATTGCCACATTGTTGAAGTATAGC ATACTTCAAGTTTCAGGTGCTCGTGTTGTATATCGGCGTGCACATCATGG CAGAGACGACACGACATCACAACAGTGCCCAAAGAAATTGTGCCACATAG GACTGTGTGTGTTCATTGGCGCAATGTTGAAGTTTGAATTGAAGTACATG TTGAAGTGTTTGAGTCTTGCGCATGGTGGCAGAGTCGTTGCATAATCCCG AAATTGTCCGCGCCTGCCACATACAGGATTCATGCGTGGCCGTGGTGCGG GGCCCGGGGGGGAGGTGATGATCAGGGTCTCCCACCTCAGCAAGATCAGT GTGTCAACCTCAACTTCAACTTTAACATCGACACTTCCACCTACGTTCAA AGTCATTCGTAGCTAGCTGTTCAGCAGTCGGTTGTGACGCAATGGCGCGA AACATCACAACTTTAACTGCAACTTGATTATTGAATGAAACAGGTGCTGG CGGGCATGACCGGCCGCGATGCGGAGGCGAAGGACGCAGCCAAGGTGTCT CTGCGGTGCCCCTGTTGGACGATAACGCGCGACGCTGCGGAGCTGGAAGC GGTATGCCGCATTGCGGGCTACAGCGACATGGGGGAGGTCAAGCAGCTGT ATCAGCGGTTGGCGGAGGATCCGCAGCATGGGAAGAAGACAGAGGGAAAG GCACCTGCGCAGGTATGACGCTGTGATGCTTGATGTTGAAAACGCCTTGG TGGATGGAAGTATGTTTGTCACTCTGTGGTTGGGTTAGGGGGGTGCTACT CTTATGCTATGGCGCCAACGGGGCAGGAGCCTGCGCAGATAATATACTAT CATGCTCCCGCGCAGGCAACAACTATAATGCTCGCTTGTGTAACCCTAAC CCTAACCCTAGAACCCTACACCTCGAAAAACCTTCTACCTATGGCGCAAT CGCGCACTGGGTTGCCGCTTGATGAATGGAAACATGTGCGTCACTTGTGG TTGGGGTGGGGGGGACGCTATGTACTCTTGGGCTATGACGGTGGTAGTTT CTTGTTTGTTTGGGGCATCCTACTGTAGCGGAATGACTGTGGAAGTGATG AGCGAACGGTGCAAAAATTGCTATTGACAGCAGGTGACAGATGAAAGGGA GGTGCAGGAGGGGAAGAAGCGAATGGGGAGCGTCCCATGCAGTTATGATG CTCTTGTGGTCTTCAACTGAAAATGTGTGAAACTCACACGTGGTTAGGTT GGGGGTGTGCTACGTGTACGCGGTAACAGATGCAGCAGCCGTACGCCTGA AATAAAGGGGCTTGCGCAGATACGGCGTTCGCTTATATGACTGGTTCATA GCTTCAGTTGGTGGCTCGTTCGTGCTTTTTAGAGCATGTTACTCTCACAG CGGCAGTCATGACGTTGTTGTATCAGCTGCATCGCTGATAGGTGGCAGCC GCAGGAAACTGTGCTATGCAGATCAACTGCTTACTCATTGTACTGGCATT ATGCTGACAGTATGAGGCGCAGGCACAATTGGTCTGGGCCAGCAATTAGA ATACCCCAGCACCTGAATTTAATGCACGAGCGCTTTATTGATGAGAGCAA CTGACACCCCTGCTCAGTGAACCCTGACACTTGCAGAGAAATTACACTGG TCCAAAACCAAGCAACATGCATATACTCTGGGTAACGCTATTCCTGTATT GGTAAACCAATGCACTTTTAAGCACTTCTATTCTAGAAATCCACTTGTGG CGGTGGAGTTGCCCCGCTATATGGCTGTTGACCTCGTTTTACTCGTTGGA CGTAAGTAGCATGCAAAGCTTCGACGATGCATGTACCTGATCAGTTGTGG TCATGCCTTGGCAGTGCAACATGTATGAATGTTTGACATGCTCTCCTCCC TGTCGCTGCTTCCTGTGCAGATTGCGTTGGATCGCGCGGCTCACATGATG GATGCCGTCATATTTGGCTACCAAGATTGGGACAGCGTGAGGGCAGGGCT AGCAGACATGTACCAAGAAGCAGGCATGCCTGAGCTGGCCGACTTTGTCA AGCTTTAATGACATTAATAACAATCACACAACTTCTTCAGTA
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Coding sequence (CDS) from alignment at Contig_247:103654..112895-

>mRNA_18402 ID=mRNA_18402|Name=jgi.p|Trimin1|354441|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=978bp|location=Sequence derived from alignment at Contig_247:103654..112895- (Tribonema minus UTEX_B_3156 )
ATGAGCACTCTCTCGGACGTGGATGCGTCTCCTTACTTGGAGTTTCTCAA
CGAAAAGGCGGTGGCAGCCAATCCCCCCCGGAGGCTCTCAACGCTGCTCC
AGCTGCTGCAGTTTAAGGGCATGGCGCCCTGCGACCCCGCTGACAGGAAG
GGGCTCAACCCCTTCTTCATCCCCATGGCCACGGATGTAGATGGCACCAA
GGTAGGGCTGCTGCGCTGGCCCACAGCTCCCGAGCACCTGGCGATGCCAC
TGGTGCGCTCTAACAGCGGCAGCAGTCCCAGCAGTGGCCTGCAGCTGCTG
GCAACAGATGTGGATCACTACATCAAGCGCATAGCGGCGGAGGAAGACTT
CAAGGGATCGCCAATGGCGCGTGAAGTGATTGCTCTCGCCAACAACGGGT
TGTGGGACAGCCAAGAGCCATACGTGGCTGGTAGCGTCAAGAAGCTGGGC
TATGGCGTGGAGAGGTATCAAATGCTCAAGGTGGCACCCTTCCCCGATAT
TTACAAGTGGTTGGTGGACGCACACCTGGCCAAAGGCGACCAGATCAGCG
CACTCGCGACGGCAGAGAAGTTTAATGAGGTGTTTCTGGGATGGGGGCAC
CCATATGCGTTCTACGCCCAGGTGCTGGCGGGCATGACCGGCCGCGATGC
GGAGGCGAAGGACGCAGCCAAGGTGTCTCTGCGGTGCCCCTGTTGGACGA
TAACGCGCGACGCTGCGGAGCTGGAAGCGGTATGCCGCATTGCGGGCTAC
AGCGACATGGGGGAGGTCAAGCAGCTGTATCAGCGGTTGGCGGAGGATCC
GCAGCATGGGAAGAAGACAGAGGGAAAGGCACCTGCGCAGATTGCGTTGG
ATCGCGCGGCTCACATGATGGATGCCGTCATATTTGGCTACCAAGATTGG
GACAGCGTGAGGGCAGGGCTAGCAGACATGTACCAAGAAGCAGGCATGCC
TGAGCTGGCCGACTTTGTCAAGCTTTAA
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