mRNA_18362 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|45115 vs. uniprot
Match: TBB5_ECTVR (Tubulin beta-5 chain n=44 Tax=Eukaryota TaxID=2759 RepID=TBB5_ECTVR) HSP 1 Score: 907 bits (2345), Expect = 0.000e+0 Identity = 440/447 (98.43%), Postives = 446/447 (99.78%), Query Frame = 1
Query: 61 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCASDPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELDEAMG 1401
MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQ+THS+GGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCA+DPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFT+MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELD+AMG
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELDDAMG 447
BLAST of jgi.p|Trimin1|45115 vs. uniprot
Match: A0A7S2DBE6_9STRA (Tubulin beta chain n=6 Tax=Sar TaxID=2698737 RepID=A0A7S2DBE6_9STRA) HSP 1 Score: 874 bits (2259), Expect = 0.000e+0 Identity = 415/443 (93.68%), Postives = 437/443 (98.65%), Query Frame = 1
Query: 61 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCASDPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELD 1389
MRE+VH+QAGQCGNQIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN Y+NEATGGRYVPRAILMDLEPGTMDSVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQ+THS+GGGTG+GMGTLLISK+REEYPDRVM+TYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTC LRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCA+DPRHGRYLTCA MFRGRMSTKEVDEQMLNV+NKNSSYFVEWIPNNVK+SICDIPPKGLKMSTTFVGN+TA+QE WKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE+++
Sbjct: 9 MREVVHIQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKIREEYPDRVMTTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFALDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCGLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVINKNSSYFVEWIPNNVKSSICDIPPKGLKMSTTFVGNSTAVQETWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEDVE 451
BLAST of jgi.p|Trimin1|45115 vs. uniprot
Match: L1IEU9_GUITC (Tubulin beta chain n=18 Tax=Eukaryota TaxID=2759 RepID=L1IEU9_GUITC) HSP 1 Score: 837 bits (2161), Expect = 4.880e-303 Identity = 395/441 (89.57%), Postives = 426/441 (96.60%), Query Frame = 1
Query: 61 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCASDPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE 1383
MREIVH+Q GQCGNQIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN YFNEATGGRYVPRA+LMDLEPGTMDSVRAGPYGQ+FRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQ++HSLGGGTGAGMGTLLISK+REEYPDR+M T+S++PSPKVSDTVVEPYNATLSVHQLVENAD+CF +DNEALYDICFRTLKLTTPT+GDLNHLVSA + G TCSLRFPGQLN DLRKLAVN+VPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCA+DPRHGRYLT A MFRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+KAS+CDIPPKGLKM+ F+GN+TAIQE++KRV+EQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEF+E+EE
Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAVLMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQISHSLGGGTGAGMGTLLISKIREEYPDRIMLTFSIVPSPKVSDTVVEPYNATLSVHQLVENADECFCIDNEALYDICFRTLKLTTPTFGDLNHLVSAVMSGVTCSLRFPGQLNSDLRKLAVNIVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTAAAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMAVNFIGNSTAIQEMFKRVSEQFTGMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEEE 441
BLAST of jgi.p|Trimin1|45115 vs. uniprot
Match: TBB_TETTH (Tubulin beta chain n=61 Tax=Alveolata TaxID=33630 RepID=TBB_TETTH) HSP 1 Score: 836 bits (2159), Expect = 9.110e-303 Identity = 398/440 (90.45%), Postives = 425/440 (96.59%), Query Frame = 1
Query: 61 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCASDPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE 1380
MREIVH+Q GQCGNQIG+KFWEVISDEHGIDPTG+YHGDSDLQLERIN Y+NEATGGRYVPRAILMDLEPGTMDSVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+THSLGGGTG+GMGTLLISKVREEYPDR+M T+SV+PSPKVSDTVVEPYNATLSVHQLVENAD+C +DNEALYDICFRTLKLTTPTYGDLNHLVSAA+ G TC LRFPGQLN DLRKLAVN++PFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCA+DPRHGRYLT + +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+K+SICDIPPKGLKM+ TFVGN+TAIQE++KRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEF+E+E
Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEE 440
BLAST of jgi.p|Trimin1|45115 vs. uniprot
Match: F0Y8A1_AURAN (Uncharacterized protein n=4 Tax=Sar TaxID=2698737 RepID=F0Y8A1_AURAN) HSP 1 Score: 842 bits (2174), Expect = 1.410e-300 Identity = 396/424 (93.40%), Postives = 419/424 (98.82%), Query Frame = 1
Query: 61 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCASDPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 1332
MREIVH+Q GQCGNQIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN Y+NEATGGRYVPRAILMDLEPGTMDSVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQ+THS+GGGTGAGMGTLLISK+REEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVEN+DQCFTLDNEALYDICFRTLKLTTPTYGDLNHL++AA+CGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCA+DPRHGRYLTC+ +FRGRMSTKEVDEQMLNV+NKNSSYFVEWIPNNVK++ICDIPPKGLKMSTTF+GN+TAIQE WKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENSDQCFTLDNEALYDICFRTLKLTTPTYGDLNHLIAAALCGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCSCLFRGRMSTKEVDEQMLNVINKNSSYFVEWIPNNVKSAICDIPPKGLKMSTTFIGNSTAIQETWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
BLAST of jgi.p|Trimin1|45115 vs. uniprot
Match: A0A813LVE5_POLGL (Tubulin beta chain n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LVE5_POLGL) HSP 1 Score: 835 bits (2156), Expect = 1.150e-299 Identity = 399/440 (90.68%), Postives = 421/440 (95.68%), Query Frame = 1
Query: 61 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCASDPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE 1380
MRE+VH+QAGQCGNQIG+KFWEVISDEHGIDPTG+YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQM HSLGGGTG+GMGTLLISKVREEYPDRVM T+SVIPSPKVSDTVVEPYNA LS HQLVEN+D+CF LDNEALYDICFRTLKLTTPTYGDLNHLVSAA+ G TC LRFPGQLNCDLRK+AVN+VPFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCA+DPRHGRYLT A +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+KAS+CDIPPKGLKM+ F GN+TAIQE++KRVAE FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDE+E
Sbjct: 162 MRELVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQMCHSLGGGTGSGMGTLLISKVREEYPDRVMETFSVIPSPKVSDTVVEPYNAVLSFHQLVENSDECFLLDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNCDLRKIAVNLVPFPRLHFFMTGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTAAALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMAVAFAGNSTAIQEMFKRVAEYFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEE 601
BLAST of jgi.p|Trimin1|45115 vs. uniprot
Match: A0A813IQL8_POLGL (Tubulin beta chain n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IQL8_POLGL) HSP 1 Score: 831 bits (2147), Expect = 1.720e-298 Identity = 397/437 (90.85%), Postives = 418/437 (95.65%), Query Frame = 1
Query: 61 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCASDPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFD 1371
MRE+VH+QAGQCGNQIG+KFWEVISDEHGIDPTG+YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQM HSLGGGTG+GMGTLLISKVREEYPDRVM T+SVIPSPKVSDTVVEPYNA LS HQLVEN+D+CF LDNEALYDICFRTLKLTTPTYGDLNHLVSAA+ G TC LRFPGQLNCDLRK+AVN+VPFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCA+DPRHGRYLT A +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+KAS+CDIPPKGLKM+ F GN+TAIQE++KRVAE FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFD
Sbjct: 1 MRELVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQMCHSLGGGTGSGMGTLLISKVREEYPDRVMETFSVIPSPKVSDTVVEPYNAVLSFHQLVENSDECFLLDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNCDLRKIAVNLVPFPRLHFFMTGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTAAALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMAVAFAGNSTAIQEMFKRVAEYFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFD 437
BLAST of jgi.p|Trimin1|45115 vs. uniprot
Match: TBB_EUPCR (Tubulin beta chain n=90 Tax=Sar TaxID=2698737 RepID=TBB_EUPCR) HSP 1 Score: 825 bits (2131), Expect = 1.870e-298 Identity = 392/441 (88.89%), Postives = 422/441 (95.69%), Query Frame = 1
Query: 61 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCASDPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE 1383
MREIVHVQ GQCGNQIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN Y+NEATGGRYVPRA+LMDLEPGTMDSVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+THSLGGGTG+GMGTLLISK+REEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVENAD+ +DNEALYDICFRTLKLTTPTYGDLNHLVSA I G T LRFPGQLN DLRKLAVN++PFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCASDPRHGRYLT + MFRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+K+S+CDIPPKGLK+++TF+GN+TAIQE++KRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGE+ EDE+
Sbjct: 1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTSCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKLASTFIGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEYVEDED 441
BLAST of jgi.p|Trimin1|45115 vs. uniprot
Match: TBB_CHLRE (Tubulin beta-1/beta-2 chain n=81 Tax=Eukaryota TaxID=2759 RepID=TBB_CHLRE) HSP 1 Score: 824 bits (2128), Expect = 4.770e-298 Identity = 389/441 (88.21%), Postives = 423/441 (95.92%), Query Frame = 1
Query: 61 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCASDPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE 1383
MREIVH+Q GQCGNQIG+KFWEV+SDEHGIDPTG+YHGDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQ+ HSLGGGTG+GMGTLLISK+REEYPDR+M T+SV+PSPKVSDTVVEPYNATLSVHQLVENAD+C LDNEALYDICFRTLKLTTPT+GDLNHL+SA + G TC LRFPGQLN DLRKLAVN++PFPRLHFFM+GF PLTSRGSQQYRALTVPELTQQ +D+KNMMCA+DPRHGRYLT + +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNNVK+S+CDIPPKGLKMS TF+GN+TAIQE++KRV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+AEEEGEF+ +EE
Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASAEEEGEFEGEEE 441
BLAST of jgi.p|Trimin1|45115 vs. uniprot
Match: G9I115_9CHLO (Tubulin beta chain n=1 Tax=Ulva linza TaxID=63409 RepID=G9I115_9CHLO) HSP 1 Score: 823 bits (2125), Expect = 1.370e-297 Identity = 391/441 (88.66%), Postives = 422/441 (95.69%), Query Frame = 1
Query: 61 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQMTHSLGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCASDPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEE 1383
MREIVH+Q GQCGNQIG+KFWEV+ DEHGID TG+Y GDSDLQLERIN YFNEATGGRYVPRAILMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQ+ HS+GGGTG+GMGTLLISK+REEYPDR+M T+SV+PSPKVSDTVVEPYNATLSVHQLVE+AD+C LDNEALYDICFRTLKLTTPT+GDLNHL+SA + G TCSLRFPGQLN DLRKLAVN+VPFPRLHFFMIGF PLTSRGSQQYRALTVPELTQQ +D+KNMMCA+DPRHGRYLT A +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNNVKAS+CDIPPKGLKMS TFVGN+TA+QE++KRV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+AEEEGEFDE+EE
Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVCDEHGIDSTGTYQGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLAHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVVPSPKVSDTVVEPYNATLSVHQLVESADECLILDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGVTCSLRFPGQLNSDLRKLAVNLVPFPRLHFFMIGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTAAALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKASVCDIPPKGLKMSATFVGNSTAVQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASAEEEGEFDEEEE 441 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|45115 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_18362 ID=mRNA_18362|Name=jgi.p|Trimin1|45115|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1776bp|location=Sequence derived from alignment at Contig_226:120097..122671+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGCCGACGCAGCAGCACTCTCTCCACACAGCGAGGCTAGCGAGCAACCTCback to top protein sequence of jgi.p|Trimin1|45115 >Trimin1|45115|CE45114_443 ID=Trimin1|45115|CE45114_443|Name=jgi.p|Trimin1|45115|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=448bp MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYback to top mRNA from alignment at Contig_226:120097..122671+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_18362 ID=mRNA_18362|Name=jgi.p|Trimin1|45115|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2575bp|location=Sequence derived from alignment at Contig_226:120097..122671+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_226:120097..122671+ >mRNA_18362 ID=mRNA_18362|Name=jgi.p|Trimin1|45115|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1344bp|location=Sequence derived from alignment at Contig_226:120097..122671+ (Tribonema minus UTEX_B_3156 )back to top |