mRNA_18307 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354483
Unique NamemRNA_18307
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A835Z397_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z397_9STRA)

HSP 1 Score: 604 bits (1557), Expect = 1.720e-214
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 1 
Query:    1 MATSESHPSPAPECSGTPDAGGPEEQSRLLTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTPRLVVSVGDSDEEKIALRIAAGQHTTIQSNGSMDVVLCEQAVTLACNQDDANSSFSADSEDEAQELSWVLKASIAAYVPENMSVATLPQIVYPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPLRDSAGGEDGGDRTLKEHNQQLQPPEQWTKAPAAAVAYVSAARSDSMDLVDSEDVNVEGTDVSLRSRATSGAPIS 1056
            MATSESHPSPAPECSGTPDAGGPEEQSRLLTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTPRLVVSVGDSDEEKIALRIAAGQHTTIQSNGSMDVVLCEQAVTLACNQDDANSSFSADSEDEAQELSWVLKASIAAYVPENMSVATLPQIVYPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPLRDSAGGEDGGDRTLKEHNQQLQPPEQWTKAPAAAVAYVSAARSDSMDLVDSEDVNVEGTDVSLRSRATSGAPIS
Sbjct:    1 MATSESHPSPAPECSGTPDAGGPEEQSRLLTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTPRLVVSVGDSDEEKIALRIAAGQHTTIQSNGSMDVVLCEQAVTLACNQDDANSSFSADSEDEAQELSWVLKASIAAYVPENMSVATLPQIVYPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPLRDSAGGEDGGDRTLKEHNQQLQPPEQWTKAPAAAVAYVSAARSDSMDLVDSEDVNVEGTDVSLRSRATSGAPIS 352
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BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A836CF50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF50_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.010e-48
Identity = 93/152 (61.18%), Postives = 112/152 (73.68%), Query Frame = 1 
Query:   88 LTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTPRLVVSVGDSDEEKIALRIAAGQHTTIQS 543
            LTIFDWDDTL+CS+++QQ+Q                  + AA R LRLA  LG VVIITNAE GWVEL A++Y R V ELL DIPVVSAR++FE+QFPG+P+SWKAAAFAYVLHE+FS     P+LVVS+GDS+EE+ A+RIAA QH  I S
Sbjct:    8 LTIFDWDDTLMCSSFIQQTQY-----------------KGAACRALRLAQLLGQVVIITNAEHGWVELCAQRYLRGVNELLEDIPVVSARTRFEAQFPGSPVSWKAAAFAYVLHEQFSAIRNKPKLVVSIGDSEEERAAVRIAAAQHAMISS 142
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BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: D7FZF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF4_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 7.910e-39
Identity = 85/176 (48.30%), Postives = 121/176 (68.75%), Query Frame = 1 
Query:   88 LTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAE---QLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERF-SLDVVTPRLVVSVGDSDEEKIALRIAAGQHTTIQSNGSMDVVLCEQAVTLACNQD 603
            L +FDWDDT+L S+++Q + LLQ         E    LA++E + V+ L+ A +LG V+IITNAE+GWVELSA +++ +V+ LL  +PV+SARS FESQFPG+PL WK+AAFAY++H+ F        + VVS+GDS+EEK+A+RIA+GQH T+ +  S+  +       LAC  D
Sbjct:   73 LIVFDWDDTMLTSSWIQVNDLLQAGSYDELPLEVRRDLAQLERSVVKCLKNARRLGTVIIITNAESGWVELSAARFFVNVLPLLEGVPVISARSLFESQFPGSPLCWKSAAFAYMMHDHFLERPQWMQKKVVSIGDSNEEKVAMRIASGQHGTMAAK-SVKFITGPDPEALACQLD 247
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BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A6H5KCP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP8_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 4.360e-38
Identity = 83/176 (47.16%), Postives = 120/176 (68.18%), Query Frame = 1 
Query:   88 LTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAE---QLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERF-SLDVVTPRLVVSVGDSDEEKIALRIAAGQHTTIQSNGSMDVVLCEQAVTLACNQD 603
            L +FDWDDT+L S+++Q + LLQ         E    LA++E +  +  + A +LG V+IITNAE+GWVELSA +++ +V+ LL  +PV+SARS FESQFPG+PL WK+AAFAY++H+ F        + VVS+GDS+EEK+A+RIA+GQH T+++  S+  +       LAC  D
Sbjct:  100 LIVFDWDDTMLTSSWIQVNDLLQAGSYDELPLEVRRDLAQLERSVAKCFKNARRLGTVIIITNAESGWVELSAARFFVNVLPLLEGVPVISARSLFESQFPGSPLCWKSAAFAYMMHDHFLERPQWMQKKVVSIGDSNEEKVAMRIASGQHGTMEAK-SVKFITGPDPEALACQLD 274
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BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A7S2CXF5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CXF5_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.970e-28
Identity = 73/156 (46.79%), Postives = 101/156 (64.74%), Query Frame = 1 
Query:   79 SRLLTIFDWDDTLLCSTYVQQSQLLQVSR---LSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSL----DVVTPRLVVSVGDSDEEKIALRIAAGQ 525
            SR++ +FDWDDTL+ S+++ + +LL       LS    EQ   +E      L  ALK+G VVIITNAEAGWVE SA+++   ++ LL  + VVSARS +E  +PGAPL WKAAAFA+  ++ FS          R ++S GDS+EE+ A++IAAGQ
Sbjct:   60 SRVI-VFDWDDTLMASSWIDREKLLNTPSFGDLSAPLQEQFGALEEHVGWCLAAALKVGTVVIITNAEAGWVEYSAKRFMPRLLPLLQTMRVVSARSTYERFYPGAPLCWKAAAFAHEANQVFSGAGSDGAQAAREIISFGDSNEERTAVKIAAGQ 214
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BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A7S2TRH3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TRH3_9EUKA)

HSP 1 Score: 112 bits (280), Expect = 8.720e-25
Identity = 66/145 (45.52%), Postives = 94/145 (64.83%), Query Frame = 1 
Query:   85 LLTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAEQ--LARVEAAAVRVLRLALKLGP-VVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTPRLVVSVGDSDEEKIALR 510
            +LTIFDWDDTL+ STY+Q +     S  + +T E+  L  +E + V+ L LALK G  V IIT+A+ GWVELSA+K+Y  V  LL  + V+SARS +E +FP +PL WK  AF +   + F+ D + P+ ++S GDS  E+  +R
Sbjct:   43 VLTIFDWDDTLMPSTYLQSNGFTLKSDKALSTEEEKILGLLEKSVVKFLTLALKHGDRVCIITSAQEGWVELSAKKFYPSVAPLLKHVTVISARSTYEERFPNSPLHWKYEAFRHSATKCFA-DNLEPKSIISFGDSMIERHCVR 186
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BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A812JJB3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JJB3_9DINO)

HSP 1 Score: 107 bits (268), Expect = 4.490e-23
Identity = 65/151 (43.05%), Postives = 97/151 (64.24%), Query Frame = 1 
Query:   94 IFDWDDTLLCSTYVQQSQL-LQVSRLSPATA-EQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVV-TPRLVVSVGDSDEEKIALRIAAGQHTTI 537
            + D+DDTLL S+++ Q+ L L  +   P  A EQL  +  +A  +L+LA++ G V+IITNAE GWVELSA+K+   ++ LL ++ V+SARS FES +   P  WK AAF+  L   F+  V  TP+ ++S+GDS  E+ ALR     H+++
Sbjct:   43 VLDYDDTLLASSWLAQNGLRLDGTEPVPKEAQEQLGLLAESAANLLKLAMQYGEVIIITNAETGWVELSAKKFMPSLLPLLMNVRVISARSTFESMY-AEPSQWKVAAFSQELSLAFAKSVHGTPKNIISLGDSVHERAALRKVTAGHSSV 192
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BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A7S0CQZ9_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CQZ9_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 4.860e-23
Identity = 68/155 (43.87%), Postives = 98/155 (63.23%), Query Frame = 1 
Query:   64 GPEEQSRLLTIFDWDDTLLCSTYVQQS--QLLQVSRLSPATAEQLARVEAAAVRVLRLALKLGP-VVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTPRLVVSVGDSDEEKIALRIAA 519
            GPE     +T+FDWDDTLL S+++  +  +L     +S    +QL ++E++ V  + LAL  G  V IITNAE+GWVELSA+K+   VV LLS + V+SARS +E +FP +PL WK  AF + L + F+ D+   + V+S GDS  E+  +R  A
Sbjct:   69 GPE----TVTVFDWDDTLLPSSFLSSNGYRLDSDKAMSDDLKKQLQQLESSVVGFIELALGKGDKVYIITNAESGWVELSAQKFLPGVVPLLSRLEVISARSTYEERFPESPLQWKYYAFQHNLAKAFTNDMKA-KSVISFGDSHVERHVVRAVA 218
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BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A812Q0G7_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Q0G7_9DINO)

HSP 1 Score: 104 bits (259), Expect = 3.040e-22
Identity = 65/149 (43.62%), Postives = 88/149 (59.06%), Query Frame = 1 
Query:   88 LTIFDWDDTLLCSTYVQQS--QLLQVSRLSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVVTP----RLVVSVGDSDEEKIALRIA 516
            L IFDWDDT+L S++VQ    +L + S + P    QL  V  AA   LRLA +LG VVIITNAE GW+ELS +K+   +   L  + V+SAR+ +ES    +PL WK  AFA  +   +    +T     + V+S+GDS  E+ ALR A
Sbjct:    3 LLIFDWDDTVLPSSWVQSQGLRLDESSEVLPHHRRQLFEVATAAAETLRLAKQLGTVVIITNAERGWIELSCQKFLPTLYPALESVKVLSARTTYESSTLASPLEWKVRAFATEIERVYGRAGLTQPSRRKNVLSLGDSVHEREALRRA 151
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BLAST of jgi.p|Trimin1|354483 vs. uniprot
Match: A0A7S2TDU8_PROMC (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A7S2TDU8_PROMC)

HSP 1 Score: 105 bits (261), Expect = 4.920e-22
Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 1 
Query:   88 LTIFDWDDTLLCSTYVQQSQLLQVSRLSPATA-EQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFS--LDV--------VTPRLVVSVGDSDEEKIALR 510
            + IFDWDDTLL S+++  SQ  ++  L P  A +QL  +E A V +L  A   G V ++TN E GWVE+SAEK+   V ELL  + +VSARS ++++FP +P +WK  AF   LHE F   ++V        V  R ++S GDS  E+ AL+
Sbjct:   42 VIIFDWDDTLLASSWLA-SQGFRLDSLVPREAVDQLKMLETAVVNLLSKAFLFGEVHLVTNGETGWVEMSAEKFLPRVCELLPRVNIVSARSTYQNRFPDSPETWKVEAFRNTLHESFDNKMEVESKCYNKSVQIRNLISFGDSMHERNALK 192
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354483 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z397_9STRA1.720e-214100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CF50_9STRA1.010e-4861.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FZF4_ECTSI7.910e-3948.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCP8_9PHAE4.360e-3847.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2CXF5_9STRA2.970e-2846.79Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2TRH3_9EUKA8.720e-2545.52Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A812JJB3_9DINO4.490e-2343.05Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A7S0CQZ9_9EUKA4.860e-2343.87Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A812Q0G7_9DINO3.040e-2243.62Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S2TDU8_PROMC4.920e-2242.76Hypothetical protein n=3 Tax=Sar TaxID=2698737 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_254contigContig_254:36613..39887 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354483|estExt_Genemark1.C_Ctg_2540006
Max annot lvl2759|Eukaryota
EggNOG OGs28RT2@1|root,2S5YV@2759|Eukaryota
Evalue7.31e-41
Seed ortholog2880.D7FZF4
Hectar predicted targeting categoryother localisation
TranscriptId354805
TrackFilteredModels1
ProteinId354483
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354483gene_18307Tribonema minus UTEX_B_3156 geneContig_254 36613..39887 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354483Trimin1|354483|estExt_Genemark1.C_Ctg_2540006Tribonema minus UTEX_B_3156 polypeptideContig_254 36613..39505 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18307_1exon_18307_1Tribonema minus UTEX_B_3156 exonContig_254 36613..36768 +
exon_18307_2exon_18307_2Tribonema minus UTEX_B_3156 exonContig_254 36954..37001 +
exon_18307_3exon_18307_3Tribonema minus UTEX_B_3156 exonContig_254 37338..37444 +
exon_18307_4exon_18307_4Tribonema minus UTEX_B_3156 exonContig_254 37878..38108 +
exon_18307_5exon_18307_5Tribonema minus UTEX_B_3156 exonContig_254 38989..39887 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18307CDS_18307Tribonema minus UTEX_B_3156 CDSContig_254 36613..36768 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_18307UTR3_18307Tribonema minus UTEX_B_3156 three_prime_UTRContig_254 39506..39887 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18307 ID=mRNA_18307|Name=jgi.p|Trimin1|354483|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1441bp|location=Sequence derived from alignment at Contig_254:36613..39887+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCACCAGCGAAAGCCATCCATCACCAGCGCCTGAGTGCAGCGGCAC
TCCGGATGCAGGAGGCCCGGAGGAGCAATCCAGGCTGCTGACCATCTTCG
ACTGGGATGATACGCTGCTCTGCAGCACCTACGTGCAGCAGAGCCAGCTG
CTGCAGGTGTCTCGATTGTCGCCAGCTACTGCGGAGCAGCTGGCGCGCGT
GGAGGCTGCAGCGGTTCGCGTGCTTCGGTTAGCGCTAAAGCTTGGGCCTG
TGGTGATAATAACCAATGCCGAAGCGGGCTGGGTGGAGCTTAGCGCGGAG
AAGTACTACAGGGACGTGGTAGAGCTGCTGTCGGATATACCTGTTGTGTC
AGCACGATCCCAATTTGAGTCACAGTTCCCGGGGGCCCCCCTGAGCTGGA
AAGCGGCAGCGTTTGCCTACGTACTGCATGAGCGGTTCAGCTTGGACGTC
GTGACCCCTAGGCTGGTGGTGTCGGTGGGCGACAGTGATGAGGAGAAGAT
AGCGCTTAGGATAGCTGCGGGGCAGCACACGACCATACAGAGCAACGGCA
GCATGGATGTGGTGCTGTGCGAGCAGGCGGTTACGCTTGCCTGCAACCAG
GACGATGCCAACAGCAGCTTCAGTGCCGACAGTGAGGACGAGGCACAGGA
GCTGTCATGGGTACTCAAGGCCAGCATTGCCGCCTATGTACCTGAGAACA
TGAGTGTGGCTACCTTGCCGCAAATCGTTTATCCGCAGCAGCAGCAGCAG
CAGGCGCCGCCGGCTGCGCGTCATTCGCCGCCATCACCCCTAAGGCGCCA
GCAGCAGACGGGGGGTGTGATCACCTCACCCTTGCGTGATAGTGCTGGGG
GGGAGGACGGGGGGGATAGGACACTCAAGGAGCACAACCAGCAGTTGCAG
CCACCCGAGCAGTGGACAAAAGCCCCCGCTGCTGCAGTAGCGTACGTCAG
CGCTGCTCGCTCCGATAGCATGGACCTGGTTGATAGTGAAGATGTGAACG
TTGAGGGCACAGATGTGAGCCTCAGGAGTAGGGCCACATCAGGAGCCCCC
ATTTCGTAGCGGTGCAGTGGCGCGTTTGGTGCATGTGATGTGCATGCTCA
CATGCGCCGACACATGGCCAATCCCCTGTGATCAAACATGGTCCAACTTG
CGTTTTGTTGGGCGAACGCGGTGCGTTTGCATCCTTTACGAGGGACGCAG
GAGTCATACTTTCAGAGTAACAGTTTTATGACCTCATACTTCCACTTATG
TCAAGGAGTGGATAGTCAAGTCAACAAAGGGGGGGCAGGCCAGGCCAGGT
GGCATTTCAAAGCGGTAGCATTGATTGCCACTCTACCTTTAGCAACTGTT
GGCATCGTTGTACGCGCAGGCTCAAAGCCTGCACACCCTGTCTGTGATTG
CCATCGTTACACAGCTTTACAATACAACATCTGCGATGCGT
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protein sequence of jgi.p|Trimin1|354483

>Trimin1|354483|estExt_Genemark1.C_Ctg_2540006 ID=Trimin1|354483|estExt_Genemark1.C_Ctg_2540006|Name=jgi.p|Trimin1|354483|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=353bp
MATSESHPSPAPECSGTPDAGGPEEQSRLLTIFDWDDTLLCSTYVQQSQL
LQVSRLSPATAEQLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAE
KYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDV
VTPRLVVSVGDSDEEKIALRIAAGQHTTIQSNGSMDVVLCEQAVTLACNQ
DDANSSFSADSEDEAQELSWVLKASIAAYVPENMSVATLPQIVYPQQQQQ
QAPPAARHSPPSPLRRQQQTGGVITSPLRDSAGGEDGGDRTLKEHNQQLQ
PPEQWTKAPAAAVAYVSAARSDSMDLVDSEDVNVEGTDVSLRSRATSGAP
IS*
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mRNA from alignment at Contig_254:36613..39887+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18307 ID=mRNA_18307|Name=jgi.p|Trimin1|354483|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3275bp|location=Sequence derived from alignment at Contig_254:36613..39887+ (Tribonema minus UTEX_B_3156 )
ATGGCCACCAGCGAAAGCCATCCATCACCAGCGCCTGAGTGCAGCGGCAC
TCCGGATGCAGGAGGCCCGGAGGAGCAATCCAGGCTGCTGACCATCTTCG
ACTGGGATGATACGCTGCTCTGCAGCACCTACGTGCAGCAGAGCCAGCTG
CTGCAGGTAAGGCAGCCGATGCACTCCGTAATTGCGCACGCAAGTGGCAT
TGTCAGCGCTTAGTCGTCCCCCCTGCTCTCTCGCGGCCCAACTGTCACAC
ACTTCGTTGTAATCGGCTGGGCCACAGCAATGGCCAGGATTGCTGCTAGA
TAATTAGTAATCTTTCACTATGCTGCTGCGTTCTGTTGCAGGTGTCTCGA
TTGTCGCCAGCTACTGCGGAGCAGCTGGCGCGCGTGGAGGTGAGATACAA
GATTGGTATGAACCTCCAACACACTTGAAAATTGAAAATAGCTGCCATCT
CTCCCTTGCAATGAGGAAGCTGCCATTTAGGACCACATATGTTGCACTTG
TTCTTCGTACTGAAGCCCTGCAGCAACAATATCTGCACAAGCCTTACGTT
GTGGTTGATGGAGCTTTTGATTTGACTGGATTTTGCTGTGCACAAGTTCG
CGTTAACCTCGGCTACTGGGTGGTTTCTAAGCTGACACCTGCTACTTTGT
CCTGATGCATCCCAGTGTGCTAGCGAGCGCTCATGACACCTTTTGCTTAC
GTGGCATTGCTTTGTACATATGCAGGCTGCAGCGGTTCGCGTGCTTCGGT
TAGCGCTAAAGCTTGGGCCTGTGGTGATAATAACCAATGCCGAAGCGGGC
TGGGTGGAGCTTAGCGCGGAGAAGTACTACAGGTTGGTGTTGGCACCACG
TTTGCCTTATGTACAATGCTCGGTCTTGATGGCTCTCTCAGTGCTCCTGC
AGATGTGTGGTGACTGCCGTGAACGCCGTTGCTGGCAGTGATGAACGCAA
GGGCATACGCCATGTCAATGTTAACAGGATCAGTAATTTACACCTTGTAA
GATCATTATGCGGTCAAGCGATCCTGGTACAGCTAGTCGGTGGCTTTCAA
TAATTGCATCAGTGGCTTTCAGCTCGCCATGTGTGCGTGCTATGGCGAGC
TGAAAGCCACTGATGTATTCTATTTTTGAAGTGCAAGCCCAAGCCTTGTG
AAAGCCGCCTTTTCTGTGGCAGCATCTGCATAGCACTCACCGCTCTCCTG
CAAATGCTGACCCAACACTTGCGTATCCCGTGCGTGTTTGCATCTTGCGT
TACCGTGTGATGCAGGGACGTGGTAGAGCTGCTGTCGGATATACCTGTTG
TGTCAGCACGATCCCAATTTGAGTCACAGTTCCCGGGGGCCCCCCTGAGC
TGGAAAGCGGCAGCGTTTGCCTACGTACTGCATGAGCGGTTCAGCTTGGA
CGTCGTGACCCCTAGGCTGGTGGTGTCGGTGGGCGACAGTGATGAGGAGA
AGATAGCGCTTAGGATAGCTGCGGGGCAGCACACGACCATACAGAGGTAA
GATTCCCACTAAGTACATACATGCAATACATCACATCACAGGCAGTAGAT
CAATCACCACATGGCAGTGTATGTATGCATGCCAACACCATCATGCAGGC
AGAGGCTGAATGCGTTGAATCGTATGTGTGATTGAACCTGCGGGACATTG
CATCTGGTTGAAGGTTTGATGCTCATCTTGGAGCATTAGCATCACGTCGC
ACACAAAATCAAGACACTGTTGATGCAACAGAGTCTCTAGGTCCCATCCC
TACAGCAAAAGATGCTGCACTTGCTCTCCATTGATCATCGTGTATGAGCT
TAATGATGCCTAATGCATGCCTCACCCAGTGACCGCTGTTGCAGGCCATG
GCTTTATGGTGAAATTTATCTGCTCACGCACATGCATGTGTCGCATAGGG
CTTAGTTGGATGAGTGTCACTACATATATACCTATACAGCACAGTGTGAA
CTAAGTTTGATATCTACAGAGCAAACTACAAAAGCCATCGTGGTGAGTGT
GACCAGTTGCATACTGGCACGACGTGAGATTTTCGGGAGCTACAGGAGCA
AGTTACAGTGGGAGGGCTCCCACTTTTACTTTTGGTCAGCCACGTTTGAT
GGCCAGCAAAGCTTTGCTGATGAAGTTAAGTTTGTCTCGCCAACTGTGGA
TCTCCCTTGACAATCAGCATCACCATGTGACCTCATGAGCCCAGTGCTTC
GCGCTTTTCTCTTGATGCCATGCCTTCATACCTTGCAGCTGCACCGTGAA
GTTCCTGGCCCACCCAACGCCACATGCGCTGGCCGTACAACTAGACATGC
TCAGGGTCGACCTGGAACGTCTCTGCAAGGGCCTTGGACCACATCCATCA
TCCTCATGCACTACCACAACTGGCAGCAACGGCAGCATGGATGTGGTGCT
GTGCGAGCAGGCGGTTACGCTTGCCTGCAACCAGGACGATGCCAACAGCA
GCTTCAGTGCCGACAGTGAGGACGAGGCACAGGAGCTGTCATGGGTACTC
AAGGCCAGCATTGCCGCCTATGTACCTGAGAACATGAGTGTGGCTACCTT
GCCGCAAATCGTTTATCCGCAGCAGCAGCAGCAGCAGGCGCCGCCGGCTG
CGCGTCATTCGCCGCCATCACCCCTAAGGCGCCAGCAGCAGACGGGGGGT
GTGATCACCTCACCCTTGCGTGATAGTGCTGGGGGGGAGGACGGGGGGGA
TAGGACACTCAAGGAGCACAACCAGCAGTTGCAGCCACCCGAGCAGTGGA
CAAAAGCCCCCGCTGCTGCAGTAGCGTACGTCAGCGCTGCTCGCTCCGAT
AGCATGGACCTGGTTGATAGTGAAGATGTGAACGTTGAGGGCACAGATGT
GAGCCTCAGGAGTAGGGCCACATCAGGAGCCCCCATTTCGTAGCGGTGCA
GTGGCGCGTTTGGTGCATGTGATGTGCATGCTCACATGCGCCGACACATG
GCCAATCCCCTGTGATCAAACATGGTCCAACTTGCGTTTTGTTGGGCGAA
CGCGGTGCGTTTGCATCCTTTACGAGGGACGCAGGAGTCATACTTTCAGA
GTAACAGTTTTATGACCTCATACTTCCACTTATGTCAAGGAGTGGATAGT
CAAGTCAACAAAGGGGGGGCAGGCCAGGCCAGGTGGCATTTCAAAGCGGT
AGCATTGATTGCCACTCTACCTTTAGCAACTGTTGGCATCGTTGTACGCG
CAGGCTCAAAGCCTGCACACCCTGTCTGTGATTGCCATCGTTACACAGCT
TTACAATACAACATCTGCGATGCGT
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Coding sequence (CDS) from alignment at Contig_254:36613..39887+

>mRNA_18307 ID=mRNA_18307|Name=jgi.p|Trimin1|354483|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1059bp|location=Sequence derived from alignment at Contig_254:36613..39887+ (Tribonema minus UTEX_B_3156 )
ATGGCCACCAGCGAAAGCCATCCATCACCAGCGCCTGAGTGCAGCGGCAC
TCCGGATGCAGGAGGCCCGGAGGAGCAATCCAGGCTGCTGACCATCTTCG
ACTGGGATGATACGCTGCTCTGCAGCACCTACGTGCAGCAGAGCCAGCTG
CTGCAGGTGTCTCGATTGTCGCCAGCTACTGCGGAGCAGCTGGCGCGCGT
GGAGGCTGCAGCGGTTCGCGTGCTTCGGTTAGCGCTAAAGCTTGGGCCTG
TGGTGATAATAACCAATGCCGAAGCGGGCTGGGTGGAGCTTAGCGCGGAG
AAGTACTACAGGGACGTGGTAGAGCTGCTGTCGGATATACCTGTTGTGTC
AGCACGATCCCAATTTGAGTCACAGTTCCCGGGGGCCCCCCTGAGCTGGA
AAGCGGCAGCGTTTGCCTACGTACTGCATGAGCGGTTCAGCTTGGACGTC
GTGACCCCTAGGCTGGTGGTGTCGGTGGGCGACAGTGATGAGGAGAAGAT
AGCGCTTAGGATAGCTGCGGGGCAGCACACGACCATACAGAGCAACGGCA
GCATGGATGTGGTGCTGTGCGAGCAGGCGGTTACGCTTGCCTGCAACCAG
GACGATGCCAACAGCAGCTTCAGTGCCGACAGTGAGGACGAGGCACAGGA
GCTGTCATGGGTACTCAAGGCCAGCATTGCCGCCTATGTACCTGAGAACA
TGAGTGTGGCTACCTTGCCGCAAATCGTTTATCCGCAGCAGCAGCAGCAG
CAGGCGCCGCCGGCTGCGCGTCATTCGCCGCCATCACCCCTAAGGCGCCA
GCAGCAGACGGGGGGTGTGATCACCTCACCCTTGCGTGATAGTGCTGGGG
GGGAGGACGGGGGGGATAGGACACTCAAGGAGCACAACCAGCAGTTGCAG
CCACCCGAGCAGTGGACAAAAGCCCCCGCTGCTGCAGTAGCGTACGTCAG
CGCTGCTCGCTCCGATAGCATGGACCTGGTTGATAGTGAAGATGTGAACG
TTGAGGGCACAGATGTGAGCCTCAGGAGTAGGGCCACATCAGGAGCCCCC
ATTTCGTAG
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