mRNA_18117 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354327
Unique NamemRNA_18117
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A835Z391_9STRA (CYTOSOL_AP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z391_9STRA)

HSP 1 Score: 788 bits (2035), Expect = 4.820e-288
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 1 
Query:    1 MVSPPDTAGSYNFATEATRFKKFFTEDPTNATTKDDFAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPALGDEDGVGLSTAAFCLEEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHPDAAALSWAFSVYSLDRYKAKGKGDGAKRARRVLVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLEDNYKMIHAVGRAAGEGREPRLLDLTWGDPAKPRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQVLGLARMIMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGRLVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNNNA 1185
            MVSPPDTAGSYNFATEATRFKKFFTEDPTNATTKDDFAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPALGDEDGVGLSTAAFCLEEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHPDAAALSWAFSVYSLDRYKAKGKGDGAKRARRVLVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLEDNYKMIHAVGRAAGEGREPRLLDLTWGDPAKPRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQVLGLARMIMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGRLVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNNNA
Sbjct:    1 MVSPPDTAGSYNFATEATRFKKFFTEDPTNATTKDDFAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPALGDEDGVGLSTAAFCLEEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHPDAAALSWAFSVYSLDRYKAKGKGDGAKRARRVLVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLEDNYKMIHAVGRAAGEGREPRLLDLTWGDPAKPRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQVLGLARMIMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGRLVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNNNA 395
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BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A835YM69_9STRA (Leucyl aminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM69_9STRA)

HSP 1 Score: 469 bits (1206), Expect = 2.540e-160
Identity = 248/392 (63.27%), Postives = 290/392 (73.98%), Query Frame = 1 
Query:   31 YNFATEATRFKKFFTEDPTNAT-----TKDDFAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPALGDE---DGVGLSTAAFCLEEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHPDAAALSWAFSVYSLDRYKAKGKGDGAKRARRVLVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLEDNYKMIHAVGRAAGEGREPRLLDLTWGDPAKPRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQVLGLARMIMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGRLVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNNN 1182
            ++FA EATRF   FT D T AT     +K+DF  W   QPA  +RWFK +  ++  +GR  +VP+  +    D VG   AA CL+ E +SPFSLC+L DALP G Y    P G   ++ DAAALSWA   Y   RYK+K   D A    + LVW  GC++ +V ++AASTYLVRDLISTP ED GP HLEAV  DLAK+F G L+         VVKGD+LL+ NY MIHAVGRAA  GREPRLLDLTWGD +KP++TLVGKGVCFDTGGLDIKP++ ML MKKDMGG+AQVLG+ARM+MA  APVRLRVL+ AVEN+IAGNA+RPGDVL ARNGKTTEIGNTDAEGRLVL DCL EAS + PDLIIDCATLTGAARVALGTDVP +FCNN+
Sbjct:    6 HSFAAEATRFSGLFTNDATKATKVAVLSKEDFTGWLEMQPALVRRWFKVNKLNTFSAGRVLVVPSFNEHVASDHVG--EAACCLDGEAASPFSLCALYDALPDGHYVLHGPKGQDYEYADAAALSWALGAYRYTRYKSKP--DAADSGGKRLVWAAGCDKASVIAAAASTYLVRDLISTPCEDMGPHHLEAVVADLAKEFSGTLK---------VVKGDELLQQNYPMIHAVGRAAEPGREPRLLDLTWGDESKPKVTLVGKGVCFDTGGLDIKPASGMLLMKKDMGGSAQVLGVARMLMARGAPVRLRVLIGAVENNIAGNAYRPGDVLVARNGKTTEIGNTDAEGRLVLGDCLSEASLEHPDLIIDCATLTGAARVALGTDVPAMFCNND 384
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BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A6H5JH04_9PHAE (CYTOSOL_AP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH04_9PHAE)

HSP 1 Score: 419 bits (1076), Expect = 2.540e-138
Identity = 246/451 (54.55%), Postives = 297/451 (65.85%), Query Frame = 1 
Query:    1 MVSPPDTAGS-YNFATEATRFKKFFTED--------------PTNATTKDD-----------------FAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPA-LGDEDG-----VGLSTAAFCL---EEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHPDAAALSWAFSVYSLDRYKAKGKGDGAKRARR------VLVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLE--DNYKMIHAVGRAAGEGREPRLLDLTWGDPAK-----PRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQV----LGLARMIMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGRLVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNN 1179
            MV+     GS Y+FA  ATRF+  F E               P  A  +++                 F  W G+QP +++ W KA G DSH +GR  LVP+ +GD  G     V LS  AFCL   ++   SPFSLCSL + LP G Y       G +  PD AALSWA   YS DR+K+K KGDG ++ +       VL WP G ++  V ++AAST+LVRDLI+TP E  GPQHLEAV T LA++FGG  +         VV+GD+LL+  D+Y M+HAVGRAAG GREPRLLDLTW  P       P++TLVGKGVCFDTGGLDIKP+A MLTMKKDMGG AQV    LGLARMIM+   PVRLRV+V AVEN+I G AFRPGDVL +R+GKT+EIGNTDAEGRLVLAD LVEAS++ PDL+IDCATLTGAARVALGT+VPV+FCN+
Sbjct:  112 MVAGEGGEGSDYDFAKRATRFESSFAEGDSASAKRAVPVTVLPDKAREEEEGEGGXXGEGGVWWCLASFERWLGSQPPSSKSWIKALGQDSHTAGRLVLVPSSVGDRGGQEGEEVSLSEVAFCLGEGDDSAGSPFSLCSLREKLPAGTYALRG-ADGDVAEPDTAALSWAIGGYSFDRFKSK-KGDGGEKGKEKEDSKVVLAWPAGADKARVTAAAASTFLVRDLITTPCEHMGPQHLEAVFTSLAEEFGGTTK---------VVRGDELLKEGDSYPMVHAVGRAAGVGREPRLLDLTWAPPGSDAESLPKVTLVGKGVCFDTGGLDIKPAAGMLTMKKDMGGGAQVGILVLGLARMIMSQGLPVRLRVMVPAVENAIDGGAFRPGDVLVSRSGKTSEIGNTDAEGRLVLADALVEASSEMPDLLIDCATLTGAARVALGTEVPVVFCND 551
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BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: D7FXS8_ECTSI (Leucyl aminopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS8_ECTSI)

HSP 1 Score: 409 bits (1052), Expect = 1.800e-136
Identity = 230/381 (60.37%), Postives = 274/381 (71.92%), Query Frame = 1 
Query:   97 TKDDFAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPA-LGDEDG-----VGLSTAAFCL---EEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHPDAAALSWAFSVYSLDRYKAKGKGDGAKRARR------VLVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLEDNYKMIHAVGRAAGEGREPRLLDLTW---GDPAK--PRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQVLGLARMIMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGRLVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNN 1179
            +K  F  W G+QP +++ W KA G DSH +GR  LVP+ +GD  G     V LS  AFCL   ++   SPFSLCSL + LP G Y       G +  PD AALSWA   YS DR+K+K KGDG ++ +       VL WP G ++  V ++AAST+LVRDLI+TP E  GPQ LEAV   LA++FGG  +         VV+GD+LLE     +HAVGRAAG GREPRLLDLTW   G  A+  P++TLVGKGVCFDTGGLDIKP+A MLTMKKDMGG AQVLGLARMIM+   PVRLRV+V AVEN+I G AFRPGDVL +R+GKT+EIGNTDAEGRLVLAD LVEAS++ PDL+IDCATLTGAARVALGTDVPV+FCN+
Sbjct:   49 SKASFERWLGSQPPSSKSWIKALGQDSHTAGRLVLVPSSVGDGGGQEGGEVSLSEVAFCLGEGDDSAVSPFSLCSLREKLPTGTYALRG-ADGDVAEPDTAALSWAIGGYSFDRFKSK-KGDGGEKDKEKEDRKVVLAWPAGADKGRVTAAAASTFLVRDLITTPCEHMGPQQLEAVFASLAEEFGGTTK---------VVRGDELLEGGVT-VHAVGRAAGVGREPRLLDLTWAPAGSDAESLPKVTLVGKGVCFDTGGLDIKPAAGMLTMKKDMGGGAQVLGLARMIMSQGLPVRLRVMVPAVENAIDGGAFRPGDVLVSRSGKTSEIGNTDAEGRLVLADALVEASSEMPDLLIDCATLTGAARVALGTDVPVVFCND 417
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BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A7S2SSP6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSP6_9STRA)

HSP 1 Score: 363 bits (932), Expect = 3.920e-118
Identity = 202/369 (54.74%), Postives = 241/369 (65.31%), Query Frame = 1 
Query:   82 PTNATTKDDFAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPALGDEDGVGLSTAAFCL--EEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHPDAAALSWAFSVYSLDRYKAKGKGDGAKRARRVLVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLEDNYKMIHAVGRAAGEGREPRLLDLTWGDPAKPRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQVLGLARMIMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGRLVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNNN 1182
            P     +    +W  +Q    QRW +A+   +   G+  LVPA   ED   ++   F    +E  +S F   SL   LP G YK   P      +P AAALSWA   YS DRYK   KG  +   R VL WP GC+R  VAS+A++TYL RDLISTPAE CGP  LE     LA   G +  +         + GD LL ++   IHAVGRAA   R PRLLDLTWGD +KP+LTLVGKGVCFDTGGL+IKP  +ML MKKDMGGAAQVL LA M+M    PVRLRVL+ AVENS+ G +FRPGDVLTA+NGKTTEIGNTDAEGRL+LAD LVEA +++PD+IIDCATLTGAARVA+G D+  LF N+N
Sbjct:   99 PVLTVPEGQLDSWLESQTPHVQRWVQATNWKASAPGQLLLVPA---EDSSSIAVVLFVAGKDEHENSAFRYSSLAKDLPKGTYKLQDPV-----NPTAAALSWALGCYSFDRYK---KGSPSHGTRPVLEWPDGCDRGFVASAASATYLARDLISTPAEHCGPADLEDCMMQLASLHGAKASS---------IVGDALLGNDCAQIHAVGRAATADRAPRLLDLTWGDESKPKLTLVGKGVCFDTGGLNIKPGDSMLLMKKDMGGAAQVLALAHMVMEAKLPVRLRVLIPAVENSVDGTSFRPGDVLTAKNGKTTEIGNTDAEGRLILADALVEADSEEPDMIIDCATLTGAARVAVGLDIGALFSNDN 447
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BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: UPI00192AF052 (leucyl aminopeptidase family protein n=4 Tax=Skermanella TaxID=204447 RepID=UPI00192AF052)

HSP 1 Score: 336 bits (862), Expect = 6.940e-109
Identity = 190/368 (51.63%), Postives = 237/368 (64.40%), Query Frame = 1 
Query:   82 PTNATTKDDFAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPALGDEDGVGLSTAAFCLEEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHPDAAALSWAFSVYSLDRYKAKGKGDGAKRARRVLVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLEDNYKMIHAVGRAAGEGREPRLLDLTWGDPAKPRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQVLGLARMIMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGRLVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNNNA 1185
            P    TKD    W   QPAA + W    G  + +SG+  L+P     DG  L+     ++ + +  ++  +L  +LP G Y+  +  G        AAL WA   Y+  RYKAK       R+   LVWP+G +RDAV  +A +TYLVRDLI+TPA D GP  L A A  L  +F  +++         V  G+DLL+ NY  +HAVGRA+   REPRL+DLTWGD   PR+TLVGKGVCFDTGGLD+KPS+ ML MKKDMGGAA VLG+ARMIM    PVRLRVL+ AVENS++G+AFRP DVL  R G + E+GNTDAEGRL+L D L EA  D PD+IID ATLTGAARVALGT++P LFCN+ A
Sbjct:   11 PLTPVTKDGLEGWLADQPAAVRAWVAGIGFKA-ESGKTALLPG----DGGNLARVLVGVDAD-ADLWAYAALPASLPAGAYRIDA--GLDAGTATKAALGWALGCYAFTRYKAKND-----RSFATLVWPEGADRDAVERTATATYLVRDLINTPASDMGPAELAAAAEALGAEFKAKVK---------VTVGEDLLKKNYPAVHAVGRAST--REPRLIDLTWGDKGAPRVTLVGKGVCFDTGGLDLKPSSGMLLMKKDMGGAAHVLGVARMIMMAGLPVRLRVLIPAVENSVSGDAFRPLDVLATRKGLSVEVGNTDAEGRLILCDALAEAVTDKPDVIIDFATLTGAARVALGTELPALFCNDEA 354
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BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A7S3ZRK0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRK0_9STRA)

HSP 1 Score: 333 bits (853), Expect = 8.000e-107
Identity = 198/366 (54.10%), Postives = 229/366 (62.57%), Query Frame = 1 
Query:   82 PTNATTKDDFAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPALGDEDGVGLSTAAFCLEEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHPDAAALSWAFSVYSLDRYKAKGKGDGAKRARRVLVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLEDNYKMIHAVGRAAGEGREPRLLDLTWGDPAKPRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQVLGLARMIMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGRLVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNN 1179
            P     KD++ AW G Q A  Q + KA+G    K     L+P             AF + +  SS ++  SL   LP     +   +  PL  P  AALSW    YS D  K  G    A    +          D  A+S   TYL RDLI+TPA D GP  LEAVA DLAK  G  +R          V+GD LLE  Y  IHAVGRAAG  ++PRL+DLTWG    P++TLVGKGVCFDTGGLDIKP+A MLTMKKDMGGAA VLGLA M+M    PVRLRVLV AVEN+I+G+AFRPGDVL ARNGKTTEIGNTDAEGRLVLAD LVEA ++ PDL++DCATLTGA RVALGTDVP LF N+
Sbjct:   57 PVLVLQKDEYEAWLGEQAADTQAYLKAAGLAKFKDDALVLLPER---------KWAF-MTKNASSLYAFASLPARLPSDGAVYELESAEPL--PATAALSWGLGCYSFDACKGTGSQPKADDPPKFASLVVPAAADDYATSLKGTYLCRDLINTPAGDLGPAELEAVARDLAKAAGASVRT---------VEGDALLE-GYPQIHAVGRAAGPKQQPRLIDLTWGSEDAPKVTLVGKGVCFDTGGLDIKPAAAMLTMKKDMGGAAHVLGLAAMVMDAQLPVRLRVLVPAVENAISGDAFRPGDVLVARNGKTTEIGNTDAEGRLVLADALVEACSEAPDLLVDCATLTGAGRVALGTDVPCLFAND 400
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BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A6J4FYD8_9PROT (Leucyl aminopeptidase n=2 Tax=Magnetospirillum sp. UT-4 TaxID=2681467 RepID=A0A6J4FYD8_9PROT)

HSP 1 Score: 330 bits (846), Expect = 2.080e-106
Identity = 189/364 (51.92%), Postives = 231/364 (63.46%), Query Frame = 1 
Query:  100 KDDFAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPALGDEDGVGLSTAAFCLEEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHPDAA---ALSWAFSVYSLDRYKAKGKGDGAKRARRVLVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLEDNYKMIHAVGRAAGEGREPRLLDLTWGDPAKPRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQVLGLARMIMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGRLVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNNN 1182
            K +   W  AQPAA + W KASG  S ++G    VP  G    + L+        +   P+++  L   LP G ++       P + P AA   ALSW  + YS DRYKAKG      RA   LVWP+G +R  V ++  +  LVRDLI+TPA D GP  L A A  LA + G  +R         V+ G+ LL +NY  IHAVGRAAG  R+PRL+DL WGD   PRLTLVGKGVCFD+GGLD+K SA M  MKKDMGGAA  LGLA M+MA   PVRLRVL+ AVEN+++G+A RP DVL  R G + E+GNTDAEGRL+LAD L EA  D PDL++D ATLTGAAR ALGTD+P LFCNN+
Sbjct:   20 KAELDGWLAAQPAATRSWVKASGF-SAEAGAVCAVPGKGGALALMLAGLG-----DDDDPWTIAQLPGKLPPGTWRL-----SPARDPKAATWAALSWLLATYSFDRYKAKGG-----RAWPALVWPEGADRAYVEAAFDAIALVRDLINTPAADMGPPQLAAAAEALAAKHGAGVR---------VIVGEGLLAENYPAIHAVGRAAGHPRQPRLIDLVWGDERAPRLTLVGKGVCFDSGGLDLKASAAMKLMKKDMGGAAHALGLAAMVMAAKLPVRLRVLIPAVENAVSGDAMRPLDVLQTRKGMSVEVGNTDAEGRLILADALWEAGRDKPDLLLDFATLTGAARTALGTDLPALFCNND 358
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BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A178MYG6_9PROT (Leucyl aminopeptidase n=1 Tax=Magnetospirillum marisnigri TaxID=1285242 RepID=A0A178MYG6_9PROT)

HSP 1 Score: 329 bits (844), Expect = 4.030e-106
Identity = 196/363 (53.99%), Postives = 232/363 (63.91%), Query Frame = 1 
Query:   91 ATTKDDFAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPALGDEDGVGLSTAAFCLEEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHPDAAALSWAFSVYSLDRYKAKGKGDGAKRARRVLVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLEDNYKMIHAVGRAAGEGREPRLLDLTWGDPAKPRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQVLGLARMIMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGRLVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNN 1179
            A  K + + W   QP   + W KA+G  + + G   LVP    EDG GL    F L E+ +  ++  +L   LP G Y+       PL   + AAL WA + Y+ +RYK+K     AK   R LVWP+ C+R  V ++  +  LVRDL++TPA D GP  L   A  LA +FG Q R         VV GD LL +NY  IHAVGRAA   R PRL DLTWGD A PRLTLVGKGVCFDTGGLD+KPS+NM  MKKDMGGAA VLGLA MIMA   PVRLRVL+ AVENS++G+A RP DVL  R G T EIGNTDAEGRL+LAD L EAS D P L+ID ATLTGAAR ALG D+P LF +N
Sbjct:   17 ALRKSELSGWLDPQPDRLRGWIKATGFCA-EPGSVCLVPG---EDG-GLDRVLFGLAED-ADLWAYAALPAKLPAGAYRLSPEPPPPLA--ERAALGWALATYAYERYKSKA----AKPPPR-LVWPESCDRARVEAAHDAIALVRDLVNTPASDMGPAELTHAAERLAARFGAQCR---------VVVGDGLLAENYPAIHAVGRAAASHRRPRLADLTWGDEANPRLTLVGKGVCFDTGGLDLKPSSNMKLMKKDMGGAAHVLGLASMIMAARLPVRLRVLIPAVENSVSGDAMRPLDVLATRKGLTVEIGNTDAEGRLILADALFEASRDKPKLLIDFATLTGAARSALGPDLPALFTDN 357
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BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A7S2UWS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWS3_9STRA)

HSP 1 Score: 330 bits (845), Expect = 6.060e-106
Identity = 188/395 (47.59%), Postives = 246/395 (62.28%), Query Frame = 1 
Query:   52 TRFKKFFTEDPTNATT------KDDFAAWFGAQPAAAQRWFKASGHDSHKSGRAFLVPALGDEDGVGLSTAAFCLEEEPSSPFSLCSLVDALPVGKYKFVSPTGGPLQHP---DAAALSWAFSVYSLDRYKA------KGKGDGAKRARRV---LVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAKQFGGQLRAQHVKLAPVVVKGDDLLEDNYKMIHAVGRAAGEGREPRLLDLTWGDPAKPRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQVLGLARMIMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGRLVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNNN 1182
            TRF + F ++ +N TT      K  F ++      AA       G +  K G+   VPALG+  G      A   +++ SS F   SL   LP G Y   +  GG        + AA+SWA   Y  D+YK       K + +  K  R     +VWP GC++D V +  A+TYL+RDLISTP +D GP HL+ V  ++A   G ++           + GD+LLE NY  IHAVGRAA   R PRL+D+ WG    P +TLVGKGV FDTGGL+IKP ++M+ MKKDMGGAAQV+GLA  +MA   P++LRVLV AVEN+I+GNA RPGD++TARNG+TTE+ NTDAEGRLVLAD LVEAS++ PDL++D ATLTGAARVALG+++P +FC  +
Sbjct:    1 TRFLESFVDEVSNETTTINVVTKSTFPSFKEGAGEAASGAMDFLGLEKFKDGKVVAVPALGE--GGANEYIATVEQKDLSSRFGFSSLPSKLPAGTYMLKAAAGGEKDKEISAEKAAISWALGQYKFDKYKKTTSSTQKDESEEHKEWRTKKTKMVWPAGCDKDKVINEVAATYLIRDLISTPCDDMGPHHLQRVVEEIASTHGAEVNT---------IIGDELLEKNYPQIHAVGRAADAERAPRLIDMRWGSEG-PAVTLVGKGVMFDTGGLNIKPGSSMVQMKKDMGGAAQVIGLAHWMMAEKLPIKLRVLVPAVENAISGNALRPGDIITARNGRTTEVTNTDAEGRLVLADALVEASSETPDLLVDFATLTGAARVALGSEIPAIFCTED 383
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BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A836CHC6_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC6_9STRA)

HSP 1 Score: 479 bits (1234), Expect = 4.120e-165
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 3 
Query:    6 MAEDDDALFAAFLGEIKAVDAPPAEXXXXXXXXPADAALAGTKRTAEQAMGAAAAGEASSRPQKSFVSAPARPSIVAAPVPRAAAKQASPVPEQASLPALEQQKSPGTSPXXXXXXXXXXXXXXXXXXXXXXXXPMLPPEVATSHPMNGSGGLPQPGFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPSGYLYDPFAXXXXXXXXXXXXXXXXXXXXXXXXXXPKKFVRVGGGTTWQDPTLNEWPENDFRLFVGDLGNEVTDENLAEAFSAYASFQKAKVVREKHNNKSKGYGFVSFADGFDMVRALREKNGKYLGNRPMKISKSSWHERNIKEVRKKEKKNKREKKALGLL 1088
            MAEDDDALFAAFLGEIKAVDAPPAEXXXXXXXXPADAALAGTKRTAEQAMGAAAAGEASSRPQKSFVSAPARPSIVAAPVPRAAAKQASPVPEQASLPALEQQKSPGTSPXXXXXXXXXXXXXXXXXXXXXXXXPMLPPEVATSHPMNGSGGLPQPGFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPSGYLYDPFAXXXXXXXXXXXXXXXXXXXXXXXXXXPKKFVRVGGGTTWQDPTLNEWPENDFRLFVGDLGNEVTDENLAEAFSAYASFQKAKVVREKHNNKSKGYGFVSFADGFDMVRALREKNGKYLGNRPMKISKSSWHERNIKEVRKKEKKNKREKKALGLL
Sbjct:    1 MAEDDDALFAAFLGEIKAVDAPPAEXXXXXXXXPADAALAGTKRTAEQAMGAAAAGEASSRPQKSFVSAPARPSIVAAPVPRAAAKQASPVPEQASLPALEQQKSPGTSPXXXXXXXXXXXXXXXXXXXXXXXXPMLPPEVATSHPMNGSGGLPQPGFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPSGYLYDPFAXXXXXXXXXXXXXXXXXXXXXXXXXXPKKFVRVGGGTTWQDPTLNEWPENDFRLFVGDLGNEVTDENLAEAFSAYASFQKAKVVREKHNNKSKGYGFVSFADGFDMVRALREKNGKYLGNRPMKISKSSWHERNIKEVRKKEKKNKREKKALGLL 361
[Close]
BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A6H5KAJ6_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAJ6_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 1.420e-50
Identity = 92/127 (72.44%), Postives = 104/127 (81.89%), Query Frame = 3 
Query:  708 KFVRVGGGTTWQDPTLNEWPENDFRLFVGDLGNEVTDENLAEAFSAYASFQKAKVVREKHNNKSKGYGFVSFADGFDMVRALREKNGKYLGNRPMKISKSSWHERNIKEVRKKEKKNKREKKALGLL 1088
            KF RV GG +W+D TL EWPEND+RLFVGDLGNEVTD+NLA AF  Y SF KAKV+REK N KSKGYGFVSF DG DM++ALRE+ GKYLGNRPMKISKS+W ER++KEV+KK       KKALGLL
Sbjct:  410 KFKRVAGGKSWEDETLAEWPENDYRLFVGDLGNEVTDDNLAGAFRKYTSFAKAKVIREKWNKKSKGYGFVSFLDGMDMLKALREQQGKYLGNRPMKISKSTWKERDVKEVKKKTXXXXXVKKALGLL 536
[Close]
BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: V4B0Y0_LOTGI (RNA-binding protein 42 n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B0Y0_LOTGI)

HSP 1 Score: 172 bits (436), Expect = 2.360e-48
Identity = 83/127 (65.35%), Postives = 100/127 (78.74%), Query Frame = 3 
Query:  705 KKFVRVGGGTTWQDPTLNEWPENDFRLFVGDLGNEVTDENLAEAFSAYASFQKAKVVREKHNNKSKGYGFVSFADGFDMVRALREKNGKYLGNRPMKISKSSWHERNIKEVRKKEKKNKREKKALGL 1085
            KKFVR   GTTW+D TL+EW  +DFR+F GDLGNEV+DE+LA AFS Y SF KAK+VR++ +NKSKGYGFVSF D  D  RA+R+ NGKY+GNRP+K+ KS+W +RNI  VRKKEK    EKK LGL
Sbjct:   16 KKFVRTAAGTTWEDQTLSEWDNDDFRMFCGDLGNEVSDEHLARAFSKYPSFLKAKIVRDRRSNKSKGYGFVSFKDPGDFTRAMRDMNGKYVGNRPIKLRKSTWRDRNIDIVRKKEK----EKKRLGL 138
[Close]
BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A833WW49_PHYIN (RNA recognition motif-containing protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WW49_PHYIN)

HSP 1 Score: 177 bits (449), Expect = 4.470e-48
Identity = 81/123 (65.85%), Postives = 101/123 (82.11%), Query Frame = 3 
Query:  702 PKKFVRVGGGTTWQDPTLNEWPENDFRLFVGDLGNEVTDENLAEAFSAYASFQKAKVVREKHNNKSKGYGFVSFADGFDMVRALREKNGKYLGNRPMKISKSSWHERNIKEVRKKEKKNKREK 1070
            PK+ +R+ GG  W+DPTL EWP+NDFRLF GDLGNEV+DE LA +FS YASFQ+A+VVR+K  +KS+GYGFVSFAD FD  +ALRE NGKY+GNRP+K+SKS W ERN+   +KK +K KR+K
Sbjct:  180 PKRNLRLAGGQVWEDPTLEEWPDNDFRLFCGDLGNEVSDELLAHSFSQYASFQRARVVRDKLTHKSRGYGFVSFADPFDCAKALREMNGKYIGNRPVKLSKSKWQERNMDVAKKKLRKRKRDK 302
[Close]
BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A7S3JN71_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JN71_9STRA)

HSP 1 Score: 173 bits (438), Expect = 4.810e-48
Identity = 79/124 (63.71%), Postives = 102/124 (82.26%), Query Frame = 3 
Query:  714 VRVGGGTTWQDPTLNEWPENDFRLFVGDLGNEVTDENLAEAFSAYASFQKAKVVREKHNNKSKGYGFVSFADGFDMVRALREKNGKYLGNRPMKISKSSWHERNIKEVRKKEKKNKREKKALGL 1085
            +R  GG TW+D +L+ WPENDFRLFVG+LGNEVTDE ++ AF++YAS  KAKV+REK +NKSKGYGFVSF D +D  +ALRE NGKY+GNRP K+ +S+W +R +KEVRKKEKK+ + KK+ G+
Sbjct:   58 IRHAGGKTWRDDSLDLWPENDFRLFVGNLGNEVTDEIVSHAFASYASLAKAKVIREKFSNKSKGYGFVSFLDPYDCAKALREMNGKYIGNRPCKLQRSNWKDRTLKEVRKKEKKDSKTKKSWGI 181
[Close]
BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A329SBS0_9STRA (RRM domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SBS0_9STRA)

HSP 1 Score: 177 bits (449), Expect = 4.840e-48
Identity = 81/123 (65.85%), Postives = 100/123 (81.30%), Query Frame = 3 
Query:  702 PKKFVRVGGGTTWQDPTLNEWPENDFRLFVGDLGNEVTDENLAEAFSAYASFQKAKVVREKHNNKSKGYGFVSFADGFDMVRALREKNGKYLGNRPMKISKSSWHERNIKEVRKKEKKNKREK 1070
            PK+ +R+ GG  W+DPTL EWP+NDFRLF GDLGNEV+DE LA +FS YASFQ+A+VVR+K  +KS+GYGFVSF D FD  +ALRE NGKY+GNRP+K+SKS W ERNI   +KK +K KR+K
Sbjct:  183 PKRNLRLAGGEVWEDPTLEEWPDNDFRLFCGDLGNEVSDELLAHSFSQYASFQRARVVRDKLTHKSRGYGFVSFTDPFDCAKALREMNGKYIGNRPVKLSKSKWQERNIDVAKKKMRKRKRDK 305
[Close]
BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: H3GGQ7_PHYRM (RRM domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGQ7_PHYRM)

HSP 1 Score: 176 bits (447), Expect = 7.230e-48
Identity = 80/122 (65.57%), Postives = 101/122 (82.79%), Query Frame = 3 
Query:  705 KKFVRVGGGTTWQDPTLNEWPENDFRLFVGDLGNEVTDENLAEAFSAYASFQKAKVVREKHNNKSKGYGFVSFADGFDMVRALREKNGKYLGNRPMKISKSSWHERNIKEVRKKEKKNKREK 1070
            K+ +R+ GG  W+DPTL +WP+NDFRLF GDLGNEV+DE LA +F+AYASFQ+A+VVR+K  +KS+GYGFVSFAD FD  +ALRE NGKY+GNRP+K+SKS W ERNI   +KK +K KR+K
Sbjct:  174 KRHLRLAGGAVWEDPTLEDWPDNDFRLFCGDLGNEVSDELLAHSFAAYASFQRARVVRDKLTHKSRGYGFVSFADPFDCAKALREMNGKYIGNRPVKLSKSKWQERNIDVAKKKIRKRKRDK 295
[Close]
BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A662Y9J8_9STRA (RRM domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y9J8_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.730e-47
Identity = 80/123 (65.04%), Postives = 101/123 (82.11%), Query Frame = 3 
Query:  702 PKKFVRVGGGTTWQDPTLNEWPENDFRLFVGDLGNEVTDENLAEAFSAYASFQKAKVVREKHNNKSKGYGFVSFADGFDMVRALREKNGKYLGNRPMKISKSSWHERNIKEVRKKEKKNKREK 1070
            PK  +R+GGG  W+DPTL +WPENDFRLF GDLGNEV+DE LA +F+ YASFQ+A+VVR+K  +KS+GYGFVSFAD FD  +ALRE NGKY+GNRP+K+SKS W +RN++  +KK  K KR+K
Sbjct:  232 PKHHLRLGGGAVWEDPTLADWPENDFRLFCGDLGNEVSDELLAHSFAKYASFQRARVVRDKLTHKSRGYGFVSFADPFDCAKALREMNGKYIGNRPVKLSKSKWEDRNLEVAKKKMSKRKRDK 354
[Close]
BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: A0A0B7BTA1_9EUPU (RNA-binding protein 42 (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7BTA1_9EUPU)

HSP 1 Score: 171 bits (434), Expect = 4.810e-47
Identity = 79/127 (62.20%), Postives = 100/127 (78.74%), Query Frame = 3 
Query:  705 KKFVRVGGGTTWQDPTLNEWPENDFRLFVGDLGNEVTDENLAEAFSAYASFQKAKVVREKHNNKSKGYGFVSFADGFDMVRALREKNGKYLGNRPMKISKSSWHERNIKEVRKKEKKNKREKKALGL 1085
            KKF+R+   TTW+DPTL++W ++DFR+F GDLGNEVTDE L  AF+ Y SF KAKV+R++  NK+KGYGFVSF D  D  RA+RE NGKY+GNRP+K+ KSSW +RN++ VRKK+K    EKK LGL
Sbjct:   91 KKFLRLAANTTWEDPTLSDWQQDDFRMFCGDLGNEVTDETLVRAFNKYPSFLKAKVIRDRRTNKTKGYGFVSFKDPLDFARAMREMNGKYVGNRPIKLRKSSWRDRNLEVVRKKDK----EKKKLGL 213
[Close]
BLAST of jgi.p|Trimin1|354327 vs. uniprot
Match: V9FTM2_PHYPR (RRM domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9FTM2_PHYPR)

HSP 1 Score: 174 bits (441), Expect = 4.980e-47
Identity = 80/123 (65.04%), Postives = 99/123 (80.49%), Query Frame = 3 
Query:  702 PKKFVRVGGGTTWQDPTLNEWPENDFRLFVGDLGNEVTDENLAEAFSAYASFQKAKVVREKHNNKSKGYGFVSFADGFDMVRALREKNGKYLGNRPMKISKSSWHERNIKEVRKKEKKNKREK 1070
            PK+ +R+ GG  W+D TL EWP+NDFRLF GDLGNEV+DE LA +FS Y SFQ+A+VVR+K  +KS+GYGFVSFAD FD  +ALRE NGKY+GNRP+K+SKS W ERNI   +KK +K KR+K
Sbjct:  170 PKRHLRLAGGQVWEDSTLEEWPDNDFRLFCGDLGNEVSDELLAHSFSQYNSFQRARVVRDKLTHKSRGYGFVSFADPFDCAKALREMNGKYIGNRPVKLSKSKWEERNIDVAKKKMRKRKRDK 292
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354327 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z391_9STRA4.820e-288100.00CYTOSOL_AP domain-containing protein n=1 Tax=Tribo... [more]
A0A835YM69_9STRA2.540e-16063.27Leucyl aminopeptidase n=1 Tax=Tribonema minus TaxI... [more]
A0A6H5JH04_9PHAE2.540e-13854.55CYTOSOL_AP domain-containing protein n=1 Tax=Ectoc... [more]
D7FXS8_ECTSI1.800e-13660.37Leucyl aminopeptidase n=1 Tax=Ectocarpus siliculos... [more]
A0A7S2SSP6_9STRA3.920e-11854.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
UPI00192AF0526.940e-10951.63leucyl aminopeptidase family protein n=4 Tax=Skerm... [more]
A0A7S3ZRK0_9STRA8.000e-10754.10Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6J4FYD8_9PROT2.080e-10651.92Leucyl aminopeptidase n=2 Tax=Magnetospirillum sp.... [more]
A0A178MYG6_9PROT4.030e-10653.99Leucyl aminopeptidase n=1 Tax=Magnetospirillum mar... [more]
A0A7S2UWS3_9STRA6.060e-10647.59Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]

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BLAST of jgi.p|Trimin1|354327 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CHC6_9STRA4.120e-165100.00RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5KAJ6_9PHAE1.420e-5072.44RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
V4B0Y0_LOTGI2.360e-4865.35RNA-binding protein 42 n=1 Tax=Lottia gigantea Tax... [more]
A0A833WW49_PHYIN4.470e-4865.85RNA recognition motif-containing protein n=3 Tax=P... [more]
A0A7S3JN71_9STRA4.810e-4863.71Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A329SBS0_9STRA4.840e-4865.85RRM domain-containing protein n=2 Tax=Phytophthora... [more]
H3GGQ7_PHYRM7.230e-4865.57RRM domain-containing protein n=1 Tax=Phytophthora... [more]
A0A662Y9J8_9STRA1.730e-4765.04RRM domain-containing protein n=1 Tax=Nothophytoph... [more]
A0A0B7BTA1_9EUPU4.810e-4762.20RNA-binding protein 42 (Fragment) n=1 Tax=Arion vu... [more]
V9FTM2_PHYPR4.980e-4765.04RRM domain-containing protein n=8 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_231contigContig_231:47916..60496 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354327|estExt_Genemark1.C_Ctg_2310006
Descriptionmanganese ion binding
COG categoryE
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0260@1|root,KOG2597@2759|Eukaryota
Evalue2.95e-137
Seed ortholog2880.D7FXS8
Hectar predicted targeting categoryother localisation
TranscriptId354649
TrackFilteredModels1
ProteinId354327
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354327gene_18117Tribonema minus UTEX_B_3156 geneContig_231 47916..60496 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354327Trimin1|354327|estExt_Genemark1.C_Ctg_2310006Tribonema minus UTEX_B_3156 polypeptideContig_231 47917..60496 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18117_14exon_18117_14Tribonema minus UTEX_B_3156 exonContig_231 47916..47969 -
exon_18117_13exon_18117_13Tribonema minus UTEX_B_3156 exonContig_231 49141..49263 -
exon_18117_12exon_18117_12Tribonema minus UTEX_B_3156 exonContig_231 51029..51158 -
exon_18117_11exon_18117_11Tribonema minus UTEX_B_3156 exonContig_231 52161..52265 -
exon_18117_10exon_18117_10Tribonema minus UTEX_B_3156 exonContig_231 53721..53804 -
exon_18117_9exon_18117_9Tribonema minus UTEX_B_3156 exonContig_231 54292..54333 -
exon_18117_8exon_18117_8Tribonema minus UTEX_B_3156 exonContig_231 54872..54898 -
exon_18117_7exon_18117_7Tribonema minus UTEX_B_3156 exonContig_231 55004..55072 -
exon_18117_6exon_18117_6Tribonema minus UTEX_B_3156 exonContig_231 55691..55819 -
exon_18117_5exon_18117_5Tribonema minus UTEX_B_3156 exonContig_231 56693..56757 -
exon_18117_4exon_18117_4Tribonema minus UTEX_B_3156 exonContig_231 57836..57926 -
exon_18117_3exon_18117_3Tribonema minus UTEX_B_3156 exonContig_231 58660..58743 -
exon_18117_2exon_18117_2Tribonema minus UTEX_B_3156 exonContig_231 59977..60060 -
exon_18117_1exon_18117_1Tribonema minus UTEX_B_3156 exonContig_231 60398..60496 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_18117UTR3_18117Tribonema minus UTEX_B_3156 three_prime_UTRContig_231 47916..47916 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18117CDS_18117Tribonema minus UTEX_B_3156 CDSContig_231 60398..60496 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18117 ID=mRNA_18117|Name=jgi.p|Trimin1|354327|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1186bp|location=Sequence derived from alignment at Contig_231:47916..60496- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTCAGCCCCCCTGATACCGCTGGCAGCTACAATTTTGCTACGGAGGC
AACACGATTCAAGAAGTTCTTCACGGAAGACCCCACCAATGCCACAACGA
AGGACGACTTTGCGGCGTGGTTTGGCGCGCAGCCGGCGGCGGCGCAGCGC
TGGTTCAAGGCGAGCGGCCACGACTCCCACAAGTCGGGCCGCGCCTTCCT
GGTGCCGGCGCTGGGCGACGAGGACGGCGTCGGCCTGAGCACTGCTGCGT
TCTGCCTGGAGGAGGAGCCCTCGTCCCCATTCTCCCTTTGCAGCCTGGTG
GATGCCCTGCCCGTTGGCAAGTACAAGTTCGTCAGCCCCACAGGCGGCCC
GCTGCAGCATCCCGACGCGGCGGCATTATCGTGGGCGTTCTCTGTCTACA
GCCTCGACCGCTACAAGGCCAAGGGCAAGGGCGACGGCGCGAAGCGCGCG
CGGCGCGTCCTGGTGTGGCCGCAGGGCTGCGAGAGGGACGCCGTCGCGAG
CTCCGCGGCGTCCACGTACCTCGTGCGCGACCTGATTTCCACGCCCGCGG
AGGATTGCGGCCCCCAGCACCTGGAGGCCGTCGCAACGGATCTGGCCAAG
CAATTCGGGGGGCAGCTGAGGGCGCAGCACGTGAAGTTGGCGCCCGTGGT
GGTCAAGGGGGATGACCTGTTGGAAGACAACTACAAGATGATTCATGCAG
TAGGCCGCGCCGCCGGCGAGGGCAGGGAGCCACGCCTGCTCGACCTCACC
TGGGGCGATCCCGCAAAACCCAGGCTGACGCTGGTCGGCAAGGGCGTGTG
CTTCGACACGGGGGGCCTGGACATCAAGCCGTCGGCCAACATGCTCACCA
TGAAGAAGGACATGGGCGGCGCGGCACAGGTCCTGGGGCTCGCGCGCATG
ATCATGGCGGGCGTCGCGCCCGTGCGCCTGCGCGTGCTCGTCGCCGCGGT
GGAGAACAGCATCGCGGGCAACGCGTTCCGCCCGGGCGACGTGCTCACGG
CGCGCAACGGCAAGACGACCGAGATCGGCAACACGGACGCAGAGGGGCGC
CTCGTGCTGGCCGACTGCCTGGTGGAGGCCAGCGCAGACGACCCGGATCT
CATCATCGACTGCGCGACGCTCACGGGAGCAGCGCGCGTCGCGCTCGGCA
CGGACGTCCCCGTGCTCTTCTGCAACAACAACGCCG
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protein sequence of jgi.p|Trimin1|354327

>Trimin1|354327|estExt_Genemark1.C_Ctg_2310006 ID=Trimin1|354327|estExt_Genemark1.C_Ctg_2310006|Name=jgi.p|Trimin1|354327|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=395bp
MVSPPDTAGSYNFATEATRFKKFFTEDPTNATTKDDFAAWFGAQPAAAQR
WFKASGHDSHKSGRAFLVPALGDEDGVGLSTAAFCLEEEPSSPFSLCSLV
DALPVGKYKFVSPTGGPLQHPDAAALSWAFSVYSLDRYKAKGKGDGAKRA
RRVLVWPQGCERDAVASSAASTYLVRDLISTPAEDCGPQHLEAVATDLAK
QFGGQLRAQHVKLAPVVVKGDDLLEDNYKMIHAVGRAAGEGREPRLLDLT
WGDPAKPRLTLVGKGVCFDTGGLDIKPSANMLTMKKDMGGAAQVLGLARM
IMAGVAPVRLRVLVAAVENSIAGNAFRPGDVLTARNGKTTEIGNTDAEGR
LVLADCLVEASADDPDLIIDCATLTGAARVALGTDVPVLFCNNNA
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mRNA from alignment at Contig_231:47916..60496-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18117 ID=mRNA_18117|Name=jgi.p|Trimin1|354327|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=12581bp|location=Sequence derived from alignment at Contig_231:47916..60496- (Tribonema minus UTEX_B_3156 )
ATGGTCAGCCCCCCTGATACCGCTGGCAGCTACAATTTTGCTACGGAGGC
AACACGATTCAAGAAGTTCTTCACGGAAGACCCCACCAATGCCACAACGG
TGAGCGGCTACCTGTGCGTGCACAATGCTGTTGCGCAGTTGGTGATTTGC
AGCTGCGGCTGCGCTGGTTATGTACCGCTCCGTGATTCGCAGCTGCTGCT
GCTCTCATCATGTACCGCTTCAGCACGCAAGCACAATCAAATCATGCGGC
GCGTCGTTGCCTGCCTGTGTCAGCGATGAGTTGCCGCATCCCGCACTCCA
TCTTGCCACGTACTTGCCTCATACAGTCAGTCGAGGTGCGTGTCAGCAGC
TGTGCAAGTTCCGACTTTCGTGCTGATCTGATGACAATGCAATCCTTGGT
GCTGGGTGGGGGGGATCTCAGGTGGCGCTGTTGGAGAAGGACGACTTTGC
GGCGTGGTTTGGCGCGCAGCCGGCGGCGGCGCAGCGCTGGTTCAAGGCGA
GCGGCCACGACTCCCACAAGGTGTGTACTTTCTATTGATTCTCGCTCAGG
GCGCGAAAAAGCCCAGATGAATGGTATCTGAGCTTGCTCTACGGAATCTA
CATGTCGTGTGACAGTCTGAAAGTGTCTCACTGACAAAGGTATGTACTTC
TACGTAGGTACGCAGTGTCAGAAAGGGACCTGTGACCTCAGTTGCCAATG
CGCGGTGGGGGGTGCGGTGCGGCAAGTGCGCAGCAGCAGAGGACTCCGCC
GCACGTCAAAAAGACGTTGCGCGCTGCGCCGTGTGCGGCGGTCTTGGGCG
GCTGGTGGCGCTGCGCTGGTCCGGCGGGGGCAGCCATGCTCCATCGCGCG
CACTTGCAGAGTAGTTGCGTCATCAAGGCCCCCCTGGCGTGCACACACAC
GGCGGCACAGCCCTGGTTCAAGGCGAGCGGCCACGACTCCCACAAGGCGT
GTGGCTACACGAGAGCGCAAGGCATTCAGCTTCGGACGGTGGTGCATCGC
GCAAGGCATGGCGTGGTGACGAGCAGCAGCAGACGCATGGCTGCGCGTCG
AGGACGCGCTCTGTAGCGCTGTGTGCGGCGGTCTCAATGTGGGCGGCGGC
GCTGCGCTGATCTGACGCAAGCAGCCGTGCTCCACAACGCGCTCTCAAAG
ACTTACGTCAGCCAGGCGCTCTGACGTGCGCGGCGTATGTAGGTACGCAT
TCTTCAAAAAGGCCCCTTTGGACCTCAGTTGTTCGTGCATGGTGAGGGGT
GCGGTGTAGCAGTGCTCAGCAGCAGAGGACTCGGCCAGACGTAAACAAAA
CGTGGCGCGTGGCGCTGTGTGCGGTGACGGTCTTGAGTGGCTAGCGGCGC
CGCGCTGGTCTGGTGCGGGCGGCCATGCTCCAGCGCGCGTGCTTGAATAC
TTTGTGGTTAATCAAGGCCCTCTGGTGTGCGTACACAAGCTGGGCCACTC
CAGTGTGATGATGCGTGCACCGTGCCGGGCAGCTCAAAACAGCGCAGATT
GAGGGTGCGGCAGGGGTGGGGGTGGGGGGCTAGGCTGAGCGTTGCTGGTC
GTTGCACCTGCAGGCGCACGCATGCACGCATGCCTTGGTGCATGGAGTCG
AGACAAACAGCTTAGGCAGCTGAGCGGCCAAATGTGCTACCCGTAAAAAC
ACAGCTGGCACTTAGACAGACATGCTGTGCGTTGACACGTGTGCACTCCC
TCGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGCGCCACCGCCGCTGCTG
CAGTCGGGCCGCGCCTTCCTGGTGCCGGCGCTGGGCGACGAGGACGGCGT
CGGCCTGAGCACTGCTGCGTTCTGCCTGGAGGAGGAGGTGAGCGCAGGGC
ATGTAGGTATGTAAGCCCAGGGCTGGGGTATTATATTAGGTGGACGGTGT
CAACCCGAGCACTGCCGCCTTCTGTTTGGGGGAGAAGGTGAGCTTGGGCA
TGTATGCAGGCCTCAATTTCAGAGTATGCGTGTGTAGCAGGTGAATGATG
TCGGCTTGAGCGCTGCCGCCTTCTGCCTTGAGGAGAGATGAGAGCAGGGC
ATGTATGTATGCGGGCCCAGGGTGTAAGCATCAGGCAGCCGGTGCGGCTG
TGGATCTGTGGAGGTTGCCTTGATTGCCTCCCCCGTTGAAGGCGTCAACC
TGAGTGCTGCTGCTGGAAGACCTGACGCGGTGGACGTTGCCTCAGCCTAG
TGTTGTTTGGTAGTCATTTTTTGGAGGCGTTGTCGCACGCGCGTCAACAC
AGCCTCTGGCAAATCACGCGTGCCAATGTCTCTTCAGGGCGCGCCACTGG
CGCCCCGCGCGCAGACACGCGACACGCTCTCGTGTACTTGAAGCATGTAT
CTACAACGACGCCATGCTGTGATGTCTGCCATGTGAAAGTAATCGGCTCA
CGCTGACACGCTGAGTAGCAGTGCTCAACACTCTTGAGAGACGCGACACG
CTCTCGTGTACTCAAAGTATGCATCTACGGCTACACCATGCTTTGATGTC
TGCCATGTTAAAGCTATAGCAACGCTTCACACTCATCTCACGCGTGCGCT
CCCCCTCTCTGCTCCCCCAGCCCTCGTCCCCATTCTCCCTTTGCAGCCTG
GTGGATGCCCTGCCCGTTGGCAAGTACAAGTTCGTCAGCCCCACAGGCGG
CCCGCTGCAGCGTGAGTTGCTTGCCACGTTGCGTAGCATTGCGTAGTTCA
CGTTGGGTAGCGCCGCATGTGCTTCAATACCCCCCTTAGGTGTGCTTTGT
GTGCTGCCGCGTGAGTTGCTTGCCATTCTGCACAGTACCGCATTTGCTTC
AATACCCGGCTGTGTGCGCTGCAGCGTGAGTTGCTTGCACTGTTGCGTAG
CGTTGCATGTGCTTCAATACTCCCCCCTTAGGTGTGCTTTGTGCGCTGCA
GCGTGAGTTGCTTGCCACGTCGCGCAGCGCCGCATCTGCTCCCCCCCTGC
GTGCTGCTGTATGTGCCATAACTTGACCTCTGTAATAAGCTGATTAGGGG
TCTTGCAGCAGCGTGGGCCACGCCCGCTGCCGCGTACACCGTCTGCCAAA
GCCGTTGACGCTGACTCCGGCCCCAGCAGTGGACATTCACCCTGACCTCT
GCTGCGGACGCTCGGTCGATTGCGACGATGCTGCTGAGTACTGCGGAACC
ACACCCCATTTCTTGTTGCTTTGTGTGCTGCACACGTGCTGAGCGGCGCT
CTACGCCGCAGACATGGAGAAGAAGTTTTGCAGCGCGCTTGGGCGGTGTG
GCCGGTGCGCGTGTTGAAGTCAGTCATGTGTAACTACACCGGATGCTTTA
AGTTGAGGGAATCACATCCAGCGTGGCGCAGACTATCAAGGACTTGGCCC
TCTCTTGCTCATTGCCCCCCCCTGCCTCGAGCTGCCCCCTGTCGAATGCC
AGCGCATACCCACATGCCTTTCACTCCACGCTTGTGGAACGGACATCGCT
GCCCGCGGCCTGTTGGCAGTACCACCGACCTTCACTTGCGCAGTGCGGCA
GTGCTGAGCTCCCTCTTTTCAACATCAACTTCAACTATGCTGCACGCGCA
ACGGACACCACCTCTCTCTCCATGCGTCTCTAAGTGATGTCGACGCTGAA
GCGCCGAGCCCGCTGCGCCCCTTTGCCCAATATCAACTTCAATTTTGCTT
GCCTGCGATAGGCGCGTCACTGCGCGTCTCTGTGTGCTGCAGCATCTGAC
ACGTTGTCGCCGCTGCGGCACGCCCCTCCGCCCACGCAGATCCCGACGCG
GCGGCATTATCGTGGGCGTTCTCTGTCTACAGCCTCGACCGCTACAAGGC
CAAGGTGAGGCAGTGCTCGCCACCCTAGCCCTAGCTCCATGCTAAACCTA
GCTCTAATTCTCAGGTGCATTGTTGTCACAGTGGCGTGGGCGTTCTCTGT
GTACAGCCTCAACCGTTACAAGGCCAAGATGAGGCAGTGCTGGCAACCCT
AGTCCTAGATGTTAACCCTAACCCTAACCCTGAGGTGCGCTGTCGTGGGC
GTTCTCCATCTACAGCCTCGAACGCTACAAGGCCAAGGTGAGGCAGCGCT
CACCACCCTAGCCCTAGCTCGTTGCCAAACCCAACCCTAAATAAATGGTG
CTCCTGAGGTCTTGCTGGGTTTGGCTGCAGCCGCGCGCCTGGCATCCGAC
CCGTGCAAGGAGCGACGCGCCCTGCTGCTGCGTGCCCACCCTGCGCACAA
ACCTCACTTCATAGTGCATTAACGCCCATTCGTCCTTTAAACGACAGCTT
TGTTCAACGAACATCCCACCCACGCATGCGTCCGCCTGCAAGCCCTTAGT
ACATCGTTACAACCAGGGGCAAGGGCCATCAACTTACCACCGACAGCCGC
CAACTCTCCCATCCGATAGCCGAAAGCATTGGCGAATGAGAGTTGTATTT
GCGCGGCGTCCGTCTGTGCGCCTGCTGCCGCGTTAACTCGTTCGTACCTG
CGCGCATTTGCGTGTACCGTGCCTGTGTACAGGGCAAGGGCGACGGCGCG
AAGCGTACATCGCTTTAAGTCAAACTTGAAGTATGGACCAATGGAAGTTG
TACCTGCGCACATCTGTCTGTACCCCACCTTTGACCAGGGCAAGAACGAT
GTCACTGATTGCGCACGGCCACAGTGCGTCCGATAATAGTCAAGCCTGCG
CATATCTGTCTGTACCTGTGTGACCAGGGCAAGGGCGACGGCGCGAAGCG
CGCGCGGCGCGTCCTGGTGTGGCCGCAGGGCTGCGAGAGGGACGCCGTCG
CGAGCTCCGCGGCGTCCACGTACCTCGTGCGCGACCTGATTTCCACGCCC
GCGGAGGTAAACAAGTGAAACCACTCATGATTAAACTTCAATATAGTGAC
ACTTGCTTGCCTTGTTGTGTGATCTGATCTCGACGCCCTATGCGGTGGAC
AGGTCGAGCCCTGCGTGCCACATGACTATTTCAACTTGAGATTGGAGTTA
AAGTGCCTTGTTGGGCGATATCATCTCCACGCCCGCAGAGGTGACCCAAT
TCAATTGTTTGAACTTCGTTACAGGACTTCAGTATAGTAGATGCGCTCGC
TTGCCTCATGTTGTGATCTGGTCTCTCGACGCCCGAGGAGGTGGACAGTT
CGAGCCTGTTTGAACGCTGCGGTGTCCAAATACTTTCGCACGCCTTATGC
GCAGCCTGATTTTGATACCAGCGGACCCTGTGCATGTGCTGCCGGGTTTT
TGCCCCCCCAAGACTTCAACTTGAACTCTACAGCAGCTAACTTTTCAATG
AATTTCGTCTGCAGGCGAACGGCTCGGTGCAGTCTCAAATCAGCGCCACT
GATTCCACAAGTGCCGCTTGCCGATGAATGCATCGCCCAAAAATTAGAGC
GATACAACGTGTAACTGCTCAGCAACGCTGCTGCCCTTCTGCCGCCGCCG
CTGCTGCTGCCGCCGCTGCCGCAGGATTGCGGCCCCCAGCACCTGGAGGC
CGTCGCAACGGATCTGGCCAAGCAATTCGGGGGGCAGCTGAGGGTAAGCG
CGCTCTGACAGTCGCTGCATCTGGCTCAACGCCGATTTCACATCCTGTGC
GCAGTGCGTACTGCAAAGGGATCACAACGTCGCCGCCGCTATCCGCAGGC
GCAGCACGTGAAGTTGGCGCCCGTGGTGCGTCGCCTGTGCAAAACTTCAA
CAAATTCGCGGCGCGCGTCCTCACATCACTGCCATACCCTCCCTCGTGTG
CAGACCGTGAAGTTGGTACACGATTGTGTGCGTCTGCAGCGTTTGACCCT
GGTGCTCACCATGCGCATGTCTGGGGGCCAAGCGTGTGCGCTATCTGCAT
TGCTGCCAGCTAGGGCTCTGCTGCAGCTCCGGGCCTCTGTTGCTGGCCTG
TGCCTATCAGCAGCTTCACGTGATGACATTACACTGCTGCTTCCCCAAGT
CTCTACAATAACTTGCAGATTCTGCTCCATACGCCTGTTCCTAATTTAGA
AGGGCCGCAATCTCGCTTTTGTAAGGCCGCAGCAGTGGGCTCGGTGTGTC
GACGTGTGGTTCATGTGCACACTGCGCATACCACAGCAGCTTCGTCGAAC
AATAACGGGAGGCTGCTGTGCGGAGCGTTGTCATCGCTCTGAGCGGCTCA
CCTGCAGCTCAGTGATGTGTAGTTTGCGTCTGCCGCCATTTGCTGTCATG
TTTGCTGTCACAGGTGGTCAAGGGGGATGACCTGTTGGAAGACAACTACA
AGATGGTGAGCAGCGCCTTGGCTTTGGTGCAGTGAATGTTCTTCACCTGC
ACGCTTGAAGGAACATTCACGCTTGCTCCTACTGTACGCTTCTGTAGGGG
TTTGCTGACCTAGTTTCCAGCGAGCCCTGCAAGAGCTTTCAGATCGACTC
GGGGCTCATGTTGGCCAAAATGGCCAGGAGCAGCCAGTAGAGCGTGTTCG
CATATTGTGCTGGCTGTCATGTTGTCGATCAGAATGGTGACCGCTTTGTA
CGGATGTGAGCTACGCTAAGACACACCAAGTAATGCCAACACCTTGCGGT
GTCGCCACATCTTGGGGGGAACCCAGCAAATTTGCGCATTTGGGTATATA
CCTGCATCTTCTGCCTTCTCCCCCTTGCCCCCCCCCCCCCCCCCCCCCCC
CCCGAGCTGTCTCGGGTTCCTAACCCAGATGTCTTGTACAAACTTCACTC
CGAACCGCTTGCAATGCTCGTTCTGCTGTTGCGCAACTGCAGATTCATGC
AGTAGGCCGCGCCGCCGGCGAGGGCAGGGAGCCACGCCTGCTCGACCTCA
CCTGGGGCGATCCCGCAAAACCCAGGGTGGGTGCTCAGCAGATGTTGGTG
ATGCTGACACAGTGGTAACTGCACTCATTTATGATAGTAACTTCAATGTA
TGTAATACGTGCAGAAATACCTTTTAAAAATGTATCACCAGCCTGCTGGA
CCTCACATGGGGCAACCCCGCTAAACCAAGGGTGCGTGTTTGCCCATTCA
ACTGTGGCGATGTATATGCCCATCATCTACGTACTTCGATGCAATCTTAT
ACATTGCCTATATAAGTACGCAGCGTCGTAATACTGCTGGACCTCACATG
GGGCGACCCCGCAAAAATTAGGGTAGGCGGTTGACCATGGGTGGCAAAGC
TGACACTGTGGTAAATAAGTACATCAGTGACGCGTGTACATCGATGCTCT
TGTATGCGTTTCTTCTGGAAGTATCATGATAGCACCATAACCATGCTGGG
CCTGACAAGGGGCGATCCCGCAACACCAAGGGTGGGTGCTCAGCAGATGG
TGGTGATGCTGACACTGTGGTTAATTCACCAGTGACAATTGTACTCCGGT
GCTCTTGTATGCAATTCCTACAGAAATACCCTACCAGTGTCAGCAAAAAC
CAGGGCGGGTGATCAGCAGATGGTGGTGTTGATGCTGACACTGTGGTAAA
TGCACCCATGTATGAAAGTGCTCCGATGTATACAATACCTACAGAAGTAC
CCTAAAAGTATTACCACGCTGCTGTACCTCACATTGGGCGACCCTGCAAC
ACCAAGGGTAGGTGCTTGACCTTCGGTGGCAATGCCGACACTGTGGCTGA
TGCATCAATTGTTCCCTGCAGAAGTATCCTAATAGTATCAGCAGGCTGGG
CGACCCCGCAGAACCAGGGTCGGTGTTTCGCCCACCAGCAACGATGACGT
TGCTACGGTTTTGCCCTCCCCGCTATCGTCCGATGACACTGCAGCTGATG
CTAACAGGCGCTGAGCATGCATGGCCCACACTCAGATGTCAGAGCCGTTG
CTGTCGGCGCAAGTGACCGCTTCTTGGCTGTCTTTTCCGATACTATCACC
ATCATTGTCGCTGCCGCGCACAACAGTCCAGTTGGCACAGGGTCAGGGTT
AGGGTTAGGGTTAGAATTGGGCTGCCTGGCGATCAGAGCTGTAGCTGTAG
TTCACTCTTACACTGCAAAACTGCAGCCAGTCACGCCACCTCAGCCCTCT
ATCCTTGCCTGTCGTACTTTTTGCCGTGATTGTTGTCACCGCTGCCGTGC
GGCACAGCGCCTAACCATACCCTTAAACCTAACAGTTCAGCTCACAATGC
CTTTTGTCATTGTTGTCATCGTTGCTGTTGCCGCCGTCGCTGCCTACATG
CAGCTGACGCTGGTCGGCAAGGGCGCGTGCTTCAACACAGCACACCGCGT
CATGGCGCCCCTGAGCTCACAACGCCTCTGGCCGCTGTTGCCATTGTCAT
TGTTGCTGATGCCGTCGCCGCTGCTGTGCAGCTGACGCTGGTCGGCAAGG
GCGTGTGCTTCGACACGGGGGGCCTGGACATCAAGCCGTCGGCCAACATG
CTCACCATGAAGAAGGACATGGGCGGCGCGGCACAGGCGAGGCAGCAGCG
CTCAACATGAATGCACTATGATGACTCTAATCATTGAAACACTTTGAAGT
AGTGGAAGTGCGCACATACACATGAGATGGCGACGTATCGACTGTGCGTG
TTCACTGTATGTATGCTTCGTTTCTGACACTGTGACTAGCAGTGCACGCA
ACAGATGGGATGGGGCGAGGCAGAACGTCACGCGTCGGCAGGCTCAACAT
GATGAACTAGGACTCTGATGCTTGAAAAAGTAGAAGTGCGTGACGAATCG
AGCGTGTGCGTGTCTTAGGGTTGGGGTTGAAATCAGGATTGAGGCATGTA
TGCCCGGTCTTTGTCGCTGTGAGCAGTAGCGCACGCATTGAACATGTGAC
GAGGCAAGGCAGAATGCCGCGTTGGCAGCAGCACTCGCCACAACCCGATA
CTTCAAAGTACACGGAAGAAGAGCACATCGCAAATGATGATGACGTATCA
AGGTGAGCGTGCGTGTGTGTGAATGGGTGTGCGTTCAATGCTTGCATGGC
TGCTCGTCCCGATGCATGCAGTGCTCCGAGGCGATGCACTGGAGTCCGAA
ATGTGCGACTTCTCTCTCTAACCCTAGCCCTAACCTTTTACGTTGCTGCG
ACTACTACACCTTACAGGCCCCAGGGCTCGCGCGCATGACCGCGGCGGCC
GTCTGTAGGACAGCTGCGGTTAGGGTTAGGGTTAGGGTTAGGTTTAGGGT
TAGGGTTATGTGCCACGGGGTGAAGCACGCGCGTCGTGCAGGATCTCTCT
CTCTCTCTTTCTCTCTATGTCTTGCCCTCACTGTTGCTGTGACTGCCATA
CGTACTCACCAGGTCCTGGGACACGCGCGCATATCGTGGCTGCCGGGTGG
CTGCGATCGTGTTGCATGCACTGTTCCAAGGCAATGTACTGGAGCCTGAA
CGCTGCTTCCATTCATAAGCTTAGGCATCTTCTCTCTCAAAGCCTAACCC
TAACCGTATGCGTTGCCGGAAACTGCCATACCTGACAGGTCCTGGGGCTC
GCGCGCATGATCATGGCGGGCGTCGCGCCCGTGCGCCTGCGCGTGCTCGT
CGCCGCGGTGGAGAACAGCATCGCGGGCAACGCGTTCCGCCCGGGCGACG
TGCTCACGGCGCGCAACGGTGCGTCACCCCTTGAGAAATCATGGCAGCTG
TTGTGCACGGCACGAATCGTGTCGCTGTTGGAGATGGCGAGGCCCTTGAG
GTCGCGCGGGAAATCGCAGGAAAACGCTAGAAATCAGGGTGCTGCCTAGT
CCCACGCCAATGTCGAGCAACACGCTGAGCATCACCTGGGTCGTGCACGC
GCTGGGGATGACCTGCGTGTACATGTCCTTCAGATCATGCACTACGCGTG
TCCGCCGCAGTGGATAACAGAATTGCGGGCAACGCGTCCCGCCTGGGCGA
CGTGCTCACGGCGCGCAACGGTACGTCACCTGTTGAGGAAAAGGAACAAG
CCTTGAAGCGTGTGAAGTTTTTGCAAAGAGTCTGGGCGTGTGCGGCACTC
TCTGCTTGGCACCGACCAGCGAGACTAGAAACGCAAGTGTAGCAGAGTAC
TAGCTGGTAGGCTAGCATGCATTGAGGAATGATGGCGCATGTACATATCC
TTCAGATTGTGTGCTGCTCATATAGAATGGAGTGGTTTGTCACTGCGGCG
GCGTGCTCACGGCGCGCAATGGCACGTCACCCCTTTCGGCTTTGAATGTT
CAACTTTGCAGTACCGATTGCAGTACCGATTGCAGTACCGATTGAGGCTT
CATAATGTGCCGTCACGGCACGGTGGCGTTAGCAGCGGCTGCCATGAGCT
AAGCTTAGTGCGTATCCCACCGCAACGGTGTGTCACCCCTTGAGTATTTC
ATGTTGTGCAACAGTGCGTCACCTCTTGAGGTTGTGCAATGTGCCACCGT
GACGCAGTGGGGTAGGATGATGCCACAAGCTAAGCGTAGCCTCTTTCCGC
GCTGTTGTCGGTCCATTCTGTGCCAGAGTCTGAAAGTCAGATGTGGAGTT
CACAGCTCAGTACCCTGCTGTGTCTTCTTCACATTGATACACTCGAGATG
ACACGCAGTTCTCGAGGTAATGCGCGCGGCGCATGCACAGGTGGAATTAT
GTATAGTTCAAGTACCAACAGAGTGGCACGTCACCCAAGCGCAACTGTGC
GTCACCTCTTGAGGATTGCCTGCCTGCCATTGTGTTTGGCGGTGGGCCAC
AGCTATTGCCATGGGCCCATCGTAACTCACTGCTGTGCCATCTTCAGCCC
AAAGATCAGAGTCAAGAGGGCTACACGTTATCAGACGTCTCACAGGCACG
AGGGGCGCTGACCTTGAACCTCAGGTTACGCCTTGACTTCCAATATCGCC
CTAGGTCGGCACCCAATCCCTGAGCCTGACGATTCACGACCCTTGACCTC
CATGTCGCAGGCAAGACGACCGAGATCGGCAACACGGATGCAGGAGGGGC
GCTAACTCCGCTTGGTTAAGAAAAGTCAACGACAGTAAGAACGTGTGATC
TGTAGCATCACCCTAGGTTGGCACCCAATCCCTGAGCGACGATTCACGAC
CCTTGACTTCCATGCTGCAGGCAAGACGACCAAGATCGGCAACACGGACG
CAGGAAGGGCGCTAACTCTGCTTCAAAGAAACAATCAACAATCATCGACA
CCTTGACCCGCAATATCACCCTTGGTTGAAACCCAAACCCTGACGATTCG
CGACGCTCAACCTCCATGCTGCAGGCAAGACGACAGAGATCGGCAACACG
GACGCGGGAGGGGCGCTACCTGTTTCATAACCAGATCGAATATAATCACA
GAACCTTCACCTGCAGGATCACCCTAGGTTAGCACCCATACCCTGAGACC
CACAATTCACGACGCTCAACCTTCATACCGCAGGCAAGACGACCGAGATC
GGCAACACGGACGCAGAGGGGCGCCTCGTGCTGGCCGACTGCCTGGTGGA
GGCCAGCGCAGACGACCCGGATCTCATCATCGACTGCGCGACGCTCACGG
GAGCAGGTCAGTGGCGGTGGGCAGGGCTAGCTAGCGTTAGGGGGCAGGAT
TTTGATGAGGACTAGGGCTAATTTTGAAGGGGGTCGAGGGTAGGCCAGTG
CAGACGATCTGGACCTCATCATTGACTGCGCGACGCTCACGAGTGCGGGT
GCGTGGCTGTCATCAGGGCTAGGGTCAGGGGCAGGGTTAGTGTTAGGGTT
AGGGTTTGGATCAGGGGTCTCAGGGGCAGGTTCAGGATGAGGACTACGGC
TACACTTAATGAGGGTTGGGGGTAGGCCAGTGCAGACGACCCGGACCTCA
TTATAGACTGCGCGACGCTCATGGCGCGGGCGAGTGGCGGTAATTAGGGC
TAGGGTTGACACTTGCGGGAGCAGGTCAGTGGCGGTTGGCTGGGGCAGGG
TTCGGGTCACGGTCAGGGTGTATTAGGGGCAGGCTTAGGATGAGGACTAC
GGCTAGGCTAAGGGCTGGTCTGTGCAGACGACCCGGACCTCATCACTGAC
TGCAAGCCGCTCGCGGGCGCAGGTGAGTGGCGGAACTTAGGGCTAGAACA
AGGGGTGGGGGTGGGATTAGGACTCTGATTAGAGCTAGGCCAGTGCAGAC
GACCTGAACCTCATCATCAACTGGGCGACACTCACGGCGCGGATGAGTGG
CGGCAAAATCAGCTAGAGTTCAAGTCTACGGCTGGCACTGGGATTGGGGC
TAGGGGGTTGAGGTAAGGCAAGCTCAGATGACCCAGACCTCATCATAGAC
TGTGCGATGCTCACGGGAGCGGGTCAGTGGCGGTTGGCAGGGCTAGGTTT
AGGGGCATGGTTAGGATCAGGACCAGAAGTAGACTCAGCACATGTGGTGT
TGCCGCCTTTCGTGCTGAAATCAAGACGTAAGGGCTTGGCGGTCGCAAGC
AACGTGCGCATTGATTGTTGGAAATGCAGTGTTGTGCACTAGCAAGGGCA
GCAGGAGAGGCCGAGATGCATCGCCACACCGCGGGTGCTGGGACATACGA
GAGCGAATACTTCTATCACTACACAAAGCTGAATGTAACTGTCAGACGGT
AGAGAGTGACCGTCAACTACCGCGCATTCCTGGGAACACGCCTGCCCTCT
CTATGTGCTAATTTGCTGAGCATCACCATACGCGTGCTGAGCCGTGCTGC
ATGTGTGTGCCGCGTTTGTTTTTGCAGCGCGCGTCGCGCTCGGCACGGAC
GTCCCCGTGCTCTTCTGCAACAACAACGCCG
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Coding sequence (CDS) from alignment at Contig_231:47916..60496-

>mRNA_18117 ID=mRNA_18117|Name=jgi.p|Trimin1|354327|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1185bp|location=Sequence derived from alignment at Contig_231:47916..60496- (Tribonema minus UTEX_B_3156 )
ATGGTCAGCCCCCCTGATACCGCTGGCAGCTACAATTTTGCTACGGAGGC
AACACGATTCAAGAAGTTCTTCACGGAAGACCCCACCAATGCCACAACGA
AGGACGACTTTGCGGCGTGGTTTGGCGCGCAGCCGGCGGCGGCGCAGCGC
TGGTTCAAGGCGAGCGGCCACGACTCCCACAAGTCGGGCCGCGCCTTCCT
GGTGCCGGCGCTGGGCGACGAGGACGGCGTCGGCCTGAGCACTGCTGCGT
TCTGCCTGGAGGAGGAGCCCTCGTCCCCATTCTCCCTTTGCAGCCTGGTG
GATGCCCTGCCCGTTGGCAAGTACAAGTTCGTCAGCCCCACAGGCGGCCC
GCTGCAGCATCCCGACGCGGCGGCATTATCGTGGGCGTTCTCTGTCTACA
GCCTCGACCGCTACAAGGCCAAGGGCAAGGGCGACGGCGCGAAGCGCGCG
CGGCGCGTCCTGGTGTGGCCGCAGGGCTGCGAGAGGGACGCCGTCGCGAG
CTCCGCGGCGTCCACGTACCTCGTGCGCGACCTGATTTCCACGCCCGCGG
AGGATTGCGGCCCCCAGCACCTGGAGGCCGTCGCAACGGATCTGGCCAAG
CAATTCGGGGGGCAGCTGAGGGCGCAGCACGTGAAGTTGGCGCCCGTGGT
GGTCAAGGGGGATGACCTGTTGGAAGACAACTACAAGATGATTCATGCAG
TAGGCCGCGCCGCCGGCGAGGGCAGGGAGCCACGCCTGCTCGACCTCACC
TGGGGCGATCCCGCAAAACCCAGGCTGACGCTGGTCGGCAAGGGCGTGTG
CTTCGACACGGGGGGCCTGGACATCAAGCCGTCGGCCAACATGCTCACCA
TGAAGAAGGACATGGGCGGCGCGGCACAGGTCCTGGGGCTCGCGCGCATG
ATCATGGCGGGCGTCGCGCCCGTGCGCCTGCGCGTGCTCGTCGCCGCGGT
GGAGAACAGCATCGCGGGCAACGCGTTCCGCCCGGGCGACGTGCTCACGG
CGCGCAACGGCAAGACGACCGAGATCGGCAACACGGACGCAGAGGGGCGC
CTCGTGCTGGCCGACTGCCTGGTGGAGGCCAGCGCAGACGACCCGGATCT
CATCATCGACTGCGCGACGCTCACGGGAGCAGCGCGCGTCGCGCTCGGCA
CGGACGTCCCCGTGCTCTTCTGCAACAACAACGCC
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