mRNA_18111 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|354410
Unique Name	mRNA_18111
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|354410 vs. uniprot
Match: A0A835Z1A2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1A2_9STRA)

HSP 1 Score: 647 bits (1670), Expect = 1.630e-233
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 1

Query:    1 MSPEAINKRSLFNKPAPAAVPSEVVVTAPTQLAAPRDSIALRQHGAVGARSAARVGGSGGGVGGSAAALEAYRTGRVASDSVQRAAVRRPAGWQRRACSAEITGGVRAVAFDPRVQVVLIPKRDEINDFDRYRLWWSRDDYAKFRQVLIDWKTINADKISPTDNILSINLSDLDAEDDEPTPAPTPDAFDDSPFMESGTPSPADMVGVHPKALPAVAASPEEHSFGLQTAANGYVVHPGMFGRHRHHSCPTGFDDDEGPVSGSFDSRFAKSAPAPLQTTPMPDGLSRLALRSRDSVEDFRKLATAHGSSGGGSGRSXXXXXXXXXXXXXXXXSGLSKVFGGXXXXXXASMAPQPAPLRTAAY 1086
            MSPEAINKRSLFNKPAPAAVPSEVVVTAPTQLAAPRDSIALRQHGAVGARSAARVGGSGGGVGGSAAALEAYRTGRVASDSVQRAAVRRPAGWQRRACSAEITGGVRAVAFDPRVQVVLIPKRDEINDFDRYRLWWSRDDYAKFRQVLIDWKTINADKISPTDNILSINLSDLDAEDDEPTPAPTPDAFDDSPFMESGTPSPADMVGVHPKALPAVAASPEEHSFGLQTAANGYVVHPGMFGRHRHHSCPTGFDDDEGPVSGSFDSRFAKSAPAPLQTTPMPDGLSRLALRSRDSVEDFRKLATAHGSSGGGSGRSXXXXXXXXXXXXXXXXSGLSKVFGGXXXXXXASMAPQPAPLRTAAY
Sbjct:    1 MSPEAINKRSLFNKPAPAAVPSEVVVTAPTQLAAPRDSIALRQHGAVGARSAARVGGSGGGVGGSAAALEAYRTGRVASDSVQRAAVRRPAGWQRRACSAEITGGVRAVAFDPRVQVVLIPKRDEINDFDRYRLWWSRDDYAKFRQVLIDWKTINADKISPTDNILSINLSDLDAEDDEPTPAPTPDAFDDSPFMESGTPSPADMVGVHPKALPAVAASPEEHSFGLQTAANGYVVHPGMFGRHRHHSCPTGFDDDEGPVSGSFDSRFAKSAPAPLQTTPMPDGLSRLALRSRDSVEDFRKLATAHGSSGGGSGRSXXXXXXXXXXXXXXXXSGLSKVFGGXXXXXXASMAPQPAPLRTAAY 362

[Close]

BLAST of jgi.p|Trimin1|354410 vs. uniprot
Match: A0A835YSB0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSB0_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.250e-22
Identity = 49/66 (74.24%), Postives = 51/66 (77.27%), Query Frame = 1

Query:  724 GRHRHHSCPTGFDDDEGPVSGSFDSRFAKSAPAPLQTTPMPDGLSRLALRSRDSVEDFRKLATAHG 921
            G HRHHSCPTGFDDDEGPVSGSFDSRFAKSAPAP +  P P   +       DSVEDFRKLATAHG
Sbjct:   31 GGHRHHSCPTGFDDDEGPVSGSFDSRFAKSAPAPRRRRPCPTASAASRCARADSVEDFRKLATAHG 96

[Close]

BLAST of jgi.p|Trimin1|354410 vs. uniprot
Match: A0A6H5L2B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B2_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.500e-19
Identity = 45/75 (60.00%), Postives = 62/75 (82.67%), Query Frame = 1

Query:  319 RAVAFDPRVQVVLIPKRDEINDFDRYRLWWSRDDYAKFRQVLIDWKTINADKISPTDNILSINLSDLDAEDDEPT 543
            R V+F+ +V++VLIPKR+E ++ +R +LWW R+DYA+FRQVLIDWK  NA +IS +DNILSINLSD+D E++  T
Sbjct:  146 RGVSFNTQVKMVLIPKREEFSELERVKLWWGREDYAQFRQVLIDWKRANAHRISHSDNILSINLSDIDEEEESAT 220

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354410 vs. uniprot

BLAST of jgi.p|Trimin1|354410 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835Z1A2_9STRA	1.630e-233	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YSB0_9STRA	2.250e-22	74.24	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5L2B2_9PHAE	1.500e-19	60.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_242	contig	Contig_242:125360..134155 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|354410\|estExt_Genemark1.C_Ctg_2420017
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Hypothetical protein
Ec32 ortholog	Ec-26_005580.1
TranscriptId	354732
Track	FilteredModels1
ProteinId	354410

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354410	gene_18111	Tribonema minus UTEX_B_3156	gene	Contig_242 125360..134155 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354410	Trimin1\|354410\|estExt_Genemark1.C_Ctg_2420017	Tribonema minus UTEX_B_3156	polypeptide	Contig_242 125360..134155 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_18111_1	exon_18111_1	Tribonema minus UTEX_B_3156	exon	Contig_242 125360..125379 +
exon_18111_2	exon_18111_2	Tribonema minus UTEX_B_3156	exon	Contig_242 126601..126854 +
exon_18111_3	exon_18111_3	Tribonema minus UTEX_B_3156	exon	Contig_242 128181..128281 +
exon_18111_4	exon_18111_4	Tribonema minus UTEX_B_3156	exon	Contig_242 129445..129498 +
exon_18111_5	exon_18111_5	Tribonema minus UTEX_B_3156	exon	Contig_242 130469..130513 +
exon_18111_6	exon_18111_6	Tribonema minus UTEX_B_3156	exon	Contig_242 131413..131485 +
exon_18111_7	exon_18111_7	Tribonema minus UTEX_B_3156	exon	Contig_242 131959..132014 +
exon_18111_8	exon_18111_8	Tribonema minus UTEX_B_3156	exon	Contig_242 132958..133074 +
exon_18111_9	exon_18111_9	Tribonema minus UTEX_B_3156	exon	Contig_242 133787..134155 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_18111	CDS_18111	Tribonema minus UTEX_B_3156	CDS	Contig_242 125360..125379 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_242:125360..134155+
coding sequence from alignment at Contig_242:125360..134155+

spliced messenger RNA

>mRNA_18111 ID=mRNA_18111|Name=jgi.p|Trimin1|354410|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1089bp|location=Sequence derived from alignment at Contig_242:125360..134155+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCACCAGAGGCCATCAACAAGCGCTCGCTCTTCAACAAGCCCGCCCC
CGCCGCCGTCCCCTCGGAGGTCGTTGTGACAGCGCCCACGCAGCTGGCAG
CGCCGCGTGACTCTATCGCGCTGCGGCAACACGGTGCAGTCGGCGCGCGC
AGCGCGGCGCGCGTTGGCGGCAGCGGCGGCGGCGTTGGTGGCAGCGCGGC
GGCGCTGGAGGCATATAGGACAGGCCGCGTGGCGTCAGACAGCGTGCAGC
GGGCGGCGGTGCGGCGCCCCGCGGGGTGGCAGCGGCGAGCGTGCAGCGCG
GAGATCACAGGCGGCGTGCGAGCGGTGGCGTTCGATCCGCGCGTGCAGGT
GGTGCTGATTCCGAAACGAGACGAGATCAACGACTTCGATCGGTATCGGC
TCTGGTGGAGCAGGGATGACTACGCCAAGTTCCGGCAGGTGCTGATCGAC
TGGAAGACCATCAACGCAGACAAGATAAGTCCCACGGACAACATCTTGTC
CATCAATCTCAGCGACCTGGACGCAGAGGACGACGAACCAACACCAGCCC
CCACCCCAGACGCATTTGACGACAGCCCCTTCATGGAGAGCGGCACCCCC
AGCCCTGCGGACATGGTGGGTGTGCACCCGAAGGCATTGCCGGCAGTTGC
GGCATCGCCCGAGGAGCACAGCTTTGGCCTGCAGACGGCTGCAAATGGCT
ATGTCGTGCATCCCGGCATGTTCGGGCGGCACCGGCACCACTCGTGCCCG
ACAGGGTTCGACGACGACGAGGGCCCCGTCAGCGGCAGCTTCGACAGCCG
CTTCGCCAAGAGCGCGCCCGCGCCGCTGCAGACGACGCCCATGCCCGACG
GCCTCAGCCGCCTCGCGCTGCGCTCGCGCGACTCTGTAGAGGACTTCCGC
AAACTCGCCACCGCGCACGGCAGCAGCGGCGGCGGCAGCGGCCGCAGCGG
CGGCGGCGGCCGCAGCGGCGGCGGCGGCCGCAGCGGCGGCGGCGGCAGCG
GGCTCAGCAAGGTGTTTGGCGGCGGCGGCGCGGCGGCGGCGGCGTCGATG
GCGCCGCAGCCGGCGCCTCTGCGGACTGCTGCTTACTGA

protein sequence of jgi.p|Trimin1|354410

>Trimin1|354410|estExt_Genemark1.C_Ctg_2420017 ID=Trimin1|354410|estExt_Genemark1.C_Ctg_2420017|Name=jgi.p|Trimin1|354410|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=363bp
MSPEAINKRSLFNKPAPAAVPSEVVVTAPTQLAAPRDSIALRQHGAVGAR
SAARVGGSGGGVGGSAAALEAYRTGRVASDSVQRAAVRRPAGWQRRACSA
EITGGVRAVAFDPRVQVVLIPKRDEINDFDRYRLWWSRDDYAKFRQVLID
WKTINADKISPTDNILSINLSDLDAEDDEPTPAPTPDAFDDSPFMESGTP
SPADMVGVHPKALPAVAASPEEHSFGLQTAANGYVVHPGMFGRHRHHSCP
TGFDDDEGPVSGSFDSRFAKSAPAPLQTTPMPDGLSRLALRSRDSVEDFR
KLATAHGSSGGGSGRSGGGGRSGGGGRSGGGGSGLSKVFGGGGAAAAASM
APQPAPLRTAAY*

mRNA from alignment at Contig_242:125360..134155+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_18111 ID=mRNA_18111|Name=jgi.p|Trimin1|354410|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8796bp|location=Sequence derived from alignment at Contig_242:125360..134155+ (Tribonema minus UTEX_B_3156 )
ATGTCACCAGAGGCCATCAAGTCGGTGTCTATGACGCGTTCCGTCAGTTG
CTCCTCGCTCACAAGGTAACTGATGTAACTGATGTAGAAGATTTGCGCAC
GCCTCCGTACATACCTAGTTTTGTGTCCATGACGCGCTCCGTCGGTTGCT
CGTCGCTCACAAGGTAACTGATGTAACTGATGTAACTGATGTGCGCATGC
GTCCGTACTGCTATCTACCGTATTCCTGTGCCAACCTCGCCGCTCACGGT
GACCGATTGCATGCCTCTGTACCCACGGTATGCATACCTACCGTATGCCG
CATGCCTGTGCCGACCAGCAGAACTGACACGACACGTGGTTGCAGCGAAC
CCAGCGTAGGAGAGCTTGCTGCCGCGAAGGGAGCTTGACTTTACAATGAA
TACCTACCGTATGCCTGTAGGAGAGCCTACTGCCGCGAAGGGCGCTTGTC
TTTACAATGAACACCTACCGTATGCCTGCCTGTGCTGAGCGCCGCCCGCA
AAGGGCGCTTGCTGCTGCGTGCCATTCACGCGCTTTTGCATGCGCTGTCA
AAAGCGTGCATGCTTCAGAAATGAAATATCAAAAAGTCGGCTTCAAGAAA
TGAGACATCGAAGAGTCGGCTGCAAGAGTCACCGCTGCATTGAGCAGTAT
GGACCCTGACCCTAGCCCTTAGAGTTCAGATGATGTCACGGCGCCGCTGT
GACGTAGGCATGTGTCGCACGAGCGCCTGCGCTTACCCCCCACAGGGTCG
GTGTTAGGGTCGAACGGTGTGTCGTGCTTGCATAGTCCAGGCTATGAATA
TGTAGGGTCAAATGGTTTCTCCACAAGCACGCGTAGCCCAGGCCAGTATG
GCGGTATCGACCGCTCGCACCAGCAATCTCTATGAAATGCAATTTGCATG
GCACTTTGCTCTGAACTTGCTTGTATGTATCACAAGCCTTCAAGACAAGC
GAACAAGGTGGTATCGTCCACTCACATCAGCAGTCTCTTGACTTGGCATT
TGCATCGCACGCCTATATGAACTTGCAACGTGCCAGGAGCTCACACTCAA
GAAAACCAACCTGGAAGGGTAAGTGGACAGCATTCACATACATACCCCCG
CCAGCTGCACCCCCCCCCCCCCCCCCCCCCCGGCGGCAACCATTTGCTCT
TCAACACACCCCTGCCCCCCCCCCCTCGCAGCAACCGCTCACTCTTTAAC
CAGTCCCCCCCACACCCCCCCCCCCCCCAACCCCCTCGCAGCAAGCGCTC
GCTCTTCAACAAGCCCGCCCCCGCCGCCGTCCCCTCGGAGGTCGTTGTGA
CAGCGCCCACGCAGCTGGCAGCGCCGCGTGACTCTATCGCGCTGCGGCAA
CACGGTGCAGTCGGCGCGCGCAGCGCGGCGCGCGTTGGCGGCAGCGGCGG
CGGCGTTGGTGGCAGCGCGGCGGCGCTGGAGGCATATAGGACAGGCCGCG
TGGCGTCAGACAGCGTGCAGCGGGCGGCGGTGCGGCGCCCCGCGGGTGAG
CGCTGCCGCTGTTGAGCGTTGCTGCTGTTGCATGCTTCTGAGGATTCTGG
GTTGTTGTTAGCACGGATTGGCAGCCCTCAGCTCCTGGCTTTATCGATGG
CGTGCAGCGGGCGGTGGTGCGGCGCCGCGCGGGTGAGCGCTGCCGCTGTT
GAGCACTGCCTTCTTTCTGGCAGATGCACTTGTGTTATTAGCATGGAGCA
GCAGCGCTCAGCTCCTGGTCTTGTCAAATGGCGTGCAGCGCACGGCGGCG
CGGTGGCACCCCGTGGGCGCGTGCTGCTGTCGCGTGATGTGGCAGATGCC
TTATCAGCGCTGCCCAGCTCAGCTTTTTACTGGTGGCGTGCAGCCGCTGC
GCACTGCTGCTGTCGCGTCATTGAAGACACTCCTTTGTTGTTAAGCTCAG
CAGTGCTCAGCTCCTGATCTGCTGCGGCACAGGGGCGCCCCGCGGGCGAG
CGTTGCTGCCACGCGCTGCCGCTGTCTCAGTATCGGAGTACAGTACACTC
TCTCGTTTTTAGCACAGTGCAGCGGCGCACGGCGTCAACTGCTATCTAAC
GTGTGTCACCACTTGAAGTTGCATGGTACCCGGGCGTGTACAGCGAGCTG
CGGCCCCTTCGAGACGAGTACTGCACGGCATGTTGTCCCTAAATCTAACC
CTAAGGGCCCACGCGGCCACAGCGCACGGCGGCAGTGGCGGCGCGGCGAC
AGCGCTGTTGCTGAGCGCTGTCGCACGTCCACCATAGCCAGCAGCCTTCA
GCGCTTTCCTCCTCTGCGTGATTGGTGCTTATAGTGCAATCATATGCACG
TGTGATGGCTGCGGGGTGGCGGCGGCATGCGTGCAGCTGCAACGGTTTCA
TAACAAACGGTATCCCCCAGCAGCGGCGGACGCGCAAAGGCATGAGGGGT
AGGGTTACTTAGGGTTACCTGACTCTATCCCTATGCTATGCCACTGTGCA
ATGACCGATGACGCGGCGGCGCGGCCTCCAGCGCTGCGAGGCACGCCGTC
TTGGGGCTCACGCGACAGCTGCTGAATGGCGCTGTTGCCGAGCGCTGTTA
TATGAGAAGCACGGCCAGCAGCCTTCCTTCGACGCCTTCGACTGCTGCGT
GGTTGATGCTTCATTGACTGACTGATTCTTCATGTGTTTCCGCAATGCGT
TATTGCTGCAAGGTGGCAGCGGCGAGCTTGCAGCGCGGGGATCACAGGCG
CCGTTGCTGAGCGCTGTTGCATATGAAAAATACCAGCAAACACTTTCATC
TGCTGCGTGATTGATTCGTCGTTGACTGGTTCTGGTGGGTTTGTCATCTC
ATGCATGTGCGTTCGCTACAGGGTGGCAGCGGCGAGCGTGCAGCGCGGAG
ATCACAGGCGGCGTGCGAGCGGTGGCGTTCGATCCGCGCGTGCAGGTGGT
GCTGATTCCGAAACGAGACGAGGTGAGAGGATGTGTGTTTTGAGGGGGTG
ACACATGTTCCACTGGGAACATGTAGTGTATATGGTGCGTCCTGAAGGGG
TGGAAAGTTTCCACTGAAAACATGTAGTCTGGTGTGAGTACAAGCTGCCA
GGGTATTGAGGCGCGTCGTTGCATGGCGCTAGGGTTAGGGTTAGGGTTAG
GGCTGACCCGAGCATGCGCGCACGCCAGCAATCATGCATGGTCAGCAGCG
CATTGAGCCCTGGCCGTATGTATGTTAGCTTGAAACGCGCGCAGCGGCAG
AGCGCCGCAAGTGGCAGACCCTACTTGTGTACAAAGTTGGGCTTAGGGTT
AGGTCAGGGTTAGGTTTGCGAGGGCGTCTTAGACCATGGCAGGCACACAC
ATTGAGTCTGCAGATATAGTAACTTCAAGTTTATATACCTTGAAGTTGAT
GTACACAACAGGTATGTGCAGTGGTTTGCGTGGCGCGTCTTCTGTGGCTG
GCAGGAAATGCACGACCTGGGTGTGCAGATGCAGTAACTTCAGGTTGACG
TGAGGCTTTGAAGTTTGGGCTGAACCTTGATATGAGAGTTTTGTTGCCAG
AAACGGCACATCGATGCCCCTTCGCGTTGAAGAGCAATCCGAAGACTGCC
AGCTCCCAATCATTTTCAACTTCACTGTCAAGAAACCACCAGAGTGAGGG
CGGTTCCCTGCTACCTCACGAATTATATAAGCCGCATAATCTTACCCAAC
TTCGGGGGCGGTTTCCTGCTATGTACTCCGCAAATGAGATAATCTCATAA
TCCTACCCAACTTCAACGGCAAGGTGAAGTCACCTGACCTCAAAAGAGAG
TGCTGCCCAAGTGATCAGCGAATGCGTTCACTCAATACCCGAGTAACGCA
GTCCACCACTCCTGTTTCTTCACTTTCGGCTCACTTTCGGCTGAGCCCCA
AAAGTTGTTTCACTTTCCGCGGAAGCTCGCGTGTTCTGTTGGCAGCAGTG
TTTTGGCAGCGCCTCACTGCATCCGAGCGTCAACTCACATTACGGCATGC
CCCAGAAGCTGTTTCAGTTTGCACTGCAGTCCCCCTCTTTTTGTTGAAGC
GCTGTTTTGACAGTGCGCAACTGCACCCGCACATAGACTCACATTGCGGC
ATACGCTGCTCGCTGCCACCCGCGTTGTCTGTCAGATCAACGACTTCGAT
CGGTATCGGCTCTGGTGGAGCAGGGATGACTACGCCAAGGTGTGTATGTA
CTTCAAGTTTTTCAAAGTAGTCCTGTATGTACATGCCTACACGTTTTCGC
ACTTCAACAATAGAATGCGTGCCGCAGGTGTGGTGCGCACTGTGCAATAC
TGTATGCGTGTAAGTAGGTACTTGTCAGTACTTGATTAATGTGTGTCGAT
GGCTGCACATTGGTTTCTGCGTGGATGTCAATGCTTGTTGCAACGAGTTG
CCAACGCTTTCGGGCACCGTATTCTTCACGAAGTGGAGTAATCGGATGAC
CTTGTTGGCCGAGAGGCTTTGTCGCTGAAGAATGTGCGGAAGAACATTCT
GCCACATCATGGTATTCTGCCACAACGGGGCAGGGCGATTGATGGCATGG
TGCGGATGAACATGTTGCGTCATGTTGATGTGCTTTTATTATTATGGAAA
CGAATCAAAAGATCGTAGAGCTCTAGGTGACAAAGGATGGTTAGCCGCAA
GTGCCTTCCACCAATAACCGTGGTTGTTAGCCGCAGTGCCTTCCACCAAT
AACCGTGGTCGCCGCTGTTGCAGTCATTGGCCATTATATTAGCGTAGCTT
TCACTGCTCCGCTAGCCAGCGCCGCCATCGTGTTCTGAAGAAAATCCTGG
TCCAAAGAAAACACACCTGCGTTGTGGTGTTGGTAAGTCCTTCTAGTACT
GCCAGAAACGCTGCTGTAGAACCTTCACTGGGGGGCAGAGCGCCTGACGT
CTTGAAGCATCAAGTTTATTTTGTAATGAGAACGAATCCAAAGATTGTAG
AGCTCTAGGTGACAAGGGATGGTTAGCCGCAAGTGCCTTCCACCAATAGT
GTGTGGTCGCCGCTGCTGCAGTCATTGGCCACAAGTCAAACAGTGCCACC
ACATCCACAGTAGGCACAAAGACTTCTGTGTGCCAAAAGTGCCTTCCACT
GTAATGCGTATGTACCTTGCTGATCATCATCGCGTTGCCTTCTTCTGTGC
TCTCCGCAGTTCCGGCAGGTGCTGATCGACTGGAAGACCATCAACGCAGA
CAAGGTGAGAGCTCGCCACTTAGTGAACATGAATGTGCTTCTTATTGGGC
TTATTAAAATAGTAGGTGGGGGGGCGAAGGCGCAGGGCCAAGAGATGTGC
TTGCTTTGGGGTATTTGTTGACTTACTACTTTGAACACAGAAGTACTTCC
AGCTTGGGCCTGTTAGCGACCATAAACGCAGACAAGGTGAGAGCTCGCTT
CTGTACTTTGCGCATAGAAGTGCTTCCATATCGCCTCATTGATAGTAGTG
GGGGGGGCTGAAGGTTTGGTTGCTTCGCAATGCTAGGTTTCTTTCATGAC
TACTGGCTCAGCACAACACCCGCACTTTGTCATGCGTCAGCAATTGCTGA
TCCTCGCCATTCTCCAACATGACCCACACACCATCCCAGGCAACTTCCAA
GCTTAAAGCAACGTGAATTTGAGCCCATACTCATCTTCGGCGACAGTGCA
AGTATCCCTAACTCCGATCTCGTGACTGCATCAGTATGCCCCTCGCACCG
TATGTATGAAAATCGCACGTGTAACATGTTCTACCGTTGGCCTGCTTGCA
AACATCATCCGCTGCGCAACACCTTATCCTGTACAAACATCAACATGACA
GCCAACAGGAGTATGTCTTCTGTCGTAACTTCCACTGCGTCCAGACTGAA
TCACCGTATTGATGACAGTACTCTCTTTGCTGCGTTCAACCGTGGCCTAA
CATCAATAGGACGGTCAATAGGGCTGTGTCCCACGATGACCTTCTACTGT
GTCTAGACTGATTAATCTGATTCATGACAGCTATCTCTTCGTGGCCAAAC
ATCAATAGGACGGTCCCTTGTTGAACTTCTGGTTTCTTGAAGTACCGTAT
TGACGACAGTTCCCACTTCGCCGCGTCCGCTTGTTGCCGCTGCGACACTG
CAGATAAGTCCCACGGACAACATCTTGTCCATCAATCTCAGCGACCTGGA
CGCAGAGGACGACGAACCAACACCAGGTAAATGAGTAAATGAGTCACCGA
GTAAATCTGCCAACATCCTCTGTATGACGCGTGCTGGCCCTGGTCGCGCA
TGTATGTTGAGCTTATGTTCAGAATGAGGCATGCATTTTGCCATTCAGTA
GTTCACATATGTGCACCAGTGGTTGAGGCTACTTGTTATGTCTGTGTGGT
CCTGACCTGGATGCAGAGGACGAACCCACACCAGGTAAATGAGTAGACGA
GTCGTCAGGTGAATCATGCCAACACCCACTCTGTGACGGCTACTCGTGCT
GATAGCGCAGCTTGAATCACTATCATGAGCCATGACTATGTCGTGACTGT
ATCCTTATCCCGCCCCCCGTGCTTCAGCTTCAGTTCCATCACAGTGCCCA
GCTTGAAAAGAAATGCCATTGCAGCCTGACTGTTGACCTTGCACTGCCGC
AGCACAGCCTAATGTATGCCCCCCCCCCCCCCCCCCCCCCCACTTGCAGC
CCCCACCCCAGACGCATTTGACGACAGCCCCTTCATGGAGAGCGGCACCC
CCAGCGTACACATACCTGCAACACGGCCACAAGACCCCCATATGGTTGCG
GGGGAAACCAAGGGGGGCTCATGGCCCTGCCAAAAGCATCTGCAGGTATG
TGTGTATGTCCGTGCGTGTCCGCCCGCAGCTTTGTCGGGCTGATGTGTAA
CTGCCAGAAGAACGGCATGTAACTGTCACATGGCGGTTTGATTGAATAAA
TCTACGTCGCGGCTGTAAGTGCCACTGCTGAGGCCTTGGCACTTTCAGGC
AGATCTGCGCTGACAGAAGGGTTTTAAACAGAGTGTTGTATGTCGAGTGC
CACTGTGCCTCGTGCATCCCCCCCCCCCCCCCCCCCACATACACACCAAA
CCTATCCCCCCCAACTACCACCCACCCCCACCCCACCCCGGCCGTGCAGT
GCTGCTCTTGCCGACATGGTATGCGTGGTGTCACAGGCGCTGTCATTGGT
GGCTCTGAACTGCATGTCAGGTTTTAGTTTAGGCCATGTAACGCGTCACA
GTACATGCAGTACAGCGCAGGTGTGCAGCACCGCTATGCGCTGTATTCAC
TCCCCCCCCAGATCTATCCCTCCTGCCCCTTCCTCGACGTGCATCAACGC
TCAGCCTACAGATATGATGCGCGCGCACCTGAATGCGCTGCCAGCAGTGC
CTCTGAACTGCATATCATGACACACATCACTGTACACACAGCAGGTGCAC
AACACCACCGCTTGCGCTGTAGTCCCCCCCCCCCCCCCCCCCCCTCCTAC
CCCCTGCGCCCCCCTTTTCGTTCAGCCTGCAGACATGGTGGGCGTGCACC
CGAAGACGCTGCCAGCAGTGCCTCTGAACTGCATGTTAGGACACACGTCA
CTTTACAGGTGCACATCACCGCTTGTCTCATACCCCCCCCCCCCCCCCCT
CCCCTTGCCCCCCCTGTCTGCCCCCCTGCCCCCCCCCTTGTCGTTCAGCC
TGCGGACATGGTGGGTGTGCACCCGAAGGCATTGCCGGCAGTTGCGGCAT
CGCCCGAGGAGCACAGCTTTGGCCTGCAGACGGCTGCAAATGGCTATGTC
GTGCATCCCGGCATGGTGAGTCATGGCAGTGCTCTGACTGTGGTACAGTA
GGGTAGGATTAGGGTTAGGCTCAAAATGTGTGTCCAGATCTTGCCTTTGG
GGCTGTTTCTTTTTCATCAGCGCAGCTGTGGCCTGGCGAGTGCCCTGGGC
AGGTAAGGTACAACATATGCATTGACTAGGGTTTAGGTCAGGGTTAGGGT
TTGTATTAGGGTTAGGGTTAATTGGCACTGCGGACGGCAGTCACCTTGTT
CGGCTTATTTGTGCTTCATGGCATGGTGCTGTTGTGGCAGTGCTTTTTCG
GGAGCTTTCTGCATCCATGCCTAACGCCTCCACACACAACACACACACCC
CGCACAGTTCGGCCGGCACCGGCACTATTGATGCCATGCCTCTATCAGGC
ATGCAACAAAATAGCATTCTGCACCCATGCCTCCCCCCTCCCTCCCTCCT
CCCCCCTTACGCAGTTTGGCTGGCACCGGCACGACCCGTGCTCATGAATA
TATTCTGCAGCCATGCCTGACTCCCATCCTCCCCCCTCTTCATATTCTGC
ATCCATGCCTGACATTATCCCCCCCCACCCCCTTTCCCCCGTGCCGCGCA
GTTCGGCCGCCACCGGCACCACTCGTGCCCTGCACATGCCTACATCAGGC
ACGCATCAAAATATGCTGCATCCGCGCCCAAATCCCTAACACAACCGCAC
TCCCCCCCCCCCCCCCCCCGTGCGCAGTTCGGGCGGCACCGGCACCACTC
GTGCCCGACAGGGTTCGACGACGACGAGGGCCCCGTCAGCGGCAGCTTCG
ACAGCCGCTTCGCCAAGAGCGCGCCCGCGCCGCTGCAGACGACGCCCATG
CCCGACGGCCTCAGCCGCCTCGCGCTGCGCTCGCGCGACTCTGTAGAGGA
CTTCCGCAAACTCGCCACCGCGCACGGCAGCAGCGGCGGCGGCAGCGGCC
GCAGCGGCGGCGGCGGCCGCAGCGGCGGCGGCGGCCGCAGCGGCGGCGGC
GGCAGCGGGCTCAGCAAGGTGTTTGGCGGCGGCGGCGCGGCGGCGGCGGC
GTCGATGGCGCCGCAGCCGGCGCCTCTGCGGACTGCTGCTTACTGA

Coding sequence (CDS) from alignment at Contig_242:125360..134155+

>mRNA_18111 ID=mRNA_18111|Name=jgi.p|Trimin1|354410|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1089bp|location=Sequence derived from alignment at Contig_242:125360..134155+ (Tribonema minus UTEX_B_3156 )
ATGTCACCAGAGGCCATCAACAAGCGCTCGCTCTTCAACAAGCCCGCCCC
CGCCGCCGTCCCCTCGGAGGTCGTTGTGACAGCGCCCACGCAGCTGGCAG
CGCCGCGTGACTCTATCGCGCTGCGGCAACACGGTGCAGTCGGCGCGCGC
AGCGCGGCGCGCGTTGGCGGCAGCGGCGGCGGCGTTGGTGGCAGCGCGGC
GGCGCTGGAGGCATATAGGACAGGCCGCGTGGCGTCAGACAGCGTGCAGC
GGGCGGCGGTGCGGCGCCCCGCGGGGTGGCAGCGGCGAGCGTGCAGCGCG
GAGATCACAGGCGGCGTGCGAGCGGTGGCGTTCGATCCGCGCGTGCAGGT
GGTGCTGATTCCGAAACGAGACGAGATCAACGACTTCGATCGGTATCGGC
TCTGGTGGAGCAGGGATGACTACGCCAAGTTCCGGCAGGTGCTGATCGAC
TGGAAGACCATCAACGCAGACAAGATAAGTCCCACGGACAACATCTTGTC
CATCAATCTCAGCGACCTGGACGCAGAGGACGACGAACCAACACCAGCCC
CCACCCCAGACGCATTTGACGACAGCCCCTTCATGGAGAGCGGCACCCCC
AGCCCTGCGGACATGGTGGGTGTGCACCCGAAGGCATTGCCGGCAGTTGC
GGCATCGCCCGAGGAGCACAGCTTTGGCCTGCAGACGGCTGCAAATGGCT
ATGTCGTGCATCCCGGCATGTTCGGGCGGCACCGGCACCACTCGTGCCCG
ACAGGGTTCGACGACGACGAGGGCCCCGTCAGCGGCAGCTTCGACAGCCG
CTTCGCCAAGAGCGCGCCCGCGCCGCTGCAGACGACGCCCATGCCCGACG
GCCTCAGCCGCCTCGCGCTGCGCTCGCGCGACTCTGTAGAGGACTTCCGC
AAACTCGCCACCGCGCACGGCAGCAGCGGCGGCGGCAGCGGCCGCAGCGG
CGGCGGCGGCCGCAGCGGCGGCGGCGGCCGCAGCGGCGGCGGCGGCAGCG
GGCTCAGCAAGGTGTTTGGCGGCGGCGGCGCGGCGGCGGCGGCGTCGATG
GCGCCGCAGCCGGCGCCTCTGCGGACTGCTGCTTACTGA