mRNA_18089 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354191
Unique NamemRNA_18089
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|354191 vs. uniprot
Match: A0A836CGA5_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA5_9STRA)

HSP 1 Score: 892 bits (2305), Expect = 0.000e+0
Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 1
Query:    1 MASFSFSFARKAAPTNWAALVKAPPGQRQPSQAXXXXXXXXXPLSKSGASARRPVLESPPPEPLCVSEDQWLEQALAALGPSSKASASPAQLASXXXXXXXXXXXXXXXXAANALWRGLACRGMVNTGNTCYRLAVLQSLLACAPLAEAVLARPARRLLAAPAAAEHVPTWTALAQFWREFWGIGAANAGKAVNPQDTLRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVERLVKKQAKDAEQHAVLQQAAVDDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPHRPPPLQLEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRIPDAHLGAKARSDAAKRGRTYRLFAVVLHYGAAGXXXXXXXXXXXXXXXXXXXXXDVWYDCDDRVITPIDEADVLSPRHAHGAAPYLLFYQRQLPA 1545
            MASFSFSFARKAAPTNWAALVKAPPGQRQPSQAXXXXXXXXXPLSKSGASARRPVLESPPPEPLCVSEDQWLEQALAALGPSSKASASPAQLASXXXXXXXXXXXXXXXXAANALWRGLACRGMVNTGNTCYRLAVLQSLLACAPLAEAVLARPARRLLAAPAAAEHVPTWTALAQFWREFWGIGAANAGKAVNPQDTLRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVERLVKKQAKDAEQHAVLQQAAVDDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPHRPPPLQLEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRIPDAHLGAKARSDAAKRGRTYRLFAVVLHYGAAGXXXXXXXXXXXXXXXXXXXXXDVWYDCDDRVITPIDEADVLSPRHAHGAAPYLLFYQRQLPA
Sbjct:    1 MASFSFSFARKAAPTNWAALVKAPPGQRQPSQAXXXXXXXXXPLSKSGASARRPVLESPPPEPLCVSEDQWLEQALAALGPSSKASASPAQLASXXXXXXXXXXXXXXXXAANALWRGLACRGMVNTGNTCYRLAVLQSLLACAPLAEAVLARPARRLLAAPAAAEHVPTWTALAQFWREFWGIGAANAGKAVNPQDTLRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVERLVKKQAKDAEQHAVLQQAAVDDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPHRPPPLQLEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRIPDAHLGAKARSDAAKRGRTYRLFAVVLHYGAAGXXXXXXXXXXXXXXXXXXXXXDVWYDCDDRVITPIDEADVLSPRHAHGAAPYLLFYQRQLPA 515          
BLAST of jgi.p|Trimin1|354191 vs. uniprot
Match: A0A6H5JV52_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV52_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 7.960e-26
Identity = 95/267 (35.58%), Postives = 128/267 (47.94%), Query Frame = 1
Query:  352 GLACRGMVNTGNTCYRLAVLQSLLACAPLAEAVLARPARRLLAAPAAAEHVPTWTALAQFWREF----------WGIGAANAGKA---------------------------VNPQDTLRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVERLVKKQAKDAEQHAVLQQAA----------------VDDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPAR 993
            GL  RG++NTGN+C+R AVLQ+LLAC P  + VL R A  L  +  A E +PTW  LA+F   F           G G +++ K                            V P + + +  G+FR A  GEQEDA+EFLA+FL +LH+E+    K + K A        +A                 DD W EVG+GG  AVVN     +  +  SV+T +F+G  RSE   +   G A  SV +E FHCLQL +  P +P  R
Sbjct:  247 GLVHRGLINTGNSCFRNAVLQALLACEPFVQ-VLFRAAPGLRDSIPAKEALPTWAQLARFAAAFEPPKPGDAAPLGSGGSSSAKGAWSTAGGRXXXXXXXXXXXXXXXAAEPVLPDEAMSRAFGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKNKPKPASDGGDRGGSADSGTXXXXXXXXXXXXEDDAWLEVGKGGAKAVVNAPDPRKKVSNSSVVTGLFYGMFRSEVKKS---GNAKSSVTLEAFHCLQLDLDLPSSPSPR 509          
BLAST of jgi.p|Trimin1|354191 vs. uniprot
Match: K3XBS3_GLOUD (USP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBS3_GLOUD)

HSP 1 Score: 122 bits (307), Expect = 1.310e-25
Identity = 131/441 (29.71%), Postives = 180/441 (40.82%), Query Frame = 1
Query:  364 RGMVNTGNTCYRLAVLQSLLACAPLAEAVL-----ARPARRLLAAPAAAEHVPTWTALAQFWREFWG--IGAANAG--------------KAVNPQDTLRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVER-------LVKKQAKDAEQHAVLQQAA----------VDDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPHRPPPLQ--LEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRIPDAHLGAKARSDAAKRGR-----------TYRLFAVVLHYGAAGXXXXXXXXXXXXXXXXXXXXXDVWYDCDDRVITPIDEADVLSPRHAHGAAPYLLFYQR 1533
            RG+VN GNTC++  +LQSLL C P    ++       P  +LLAA  A      W  +  F REF    +G  N G              K++        VL  F+  + GEQEDA EFL +FL  LH E ER         + Q K +       + A          VDDEW EVG+ G ++V+ +        + S I  +F G LRSE     Q G+   S+ +EPFHCL L +   DA    P       G    P P    +E M+   F  EV+E            +R + +ESLP VLTL +K++ +H   G  ++  + + YP     P   +    R++ A                Y LFAVV H+G                        D W+  DD  +  I EA  L+         YLLFY R
Sbjct:  230 RGLVNQGNTCFQNVILQSLLVCPPFLNILVDISSAVAPTDQLLAA--APSSFKVWRHIIAFVREFEEPVLGKLNGGEVSGMGNSSNSKVPKSIKISGYFMDVLSEFQ-KMRGEQEDALEFLEFFLEYLHSEYERSGLTLPPCCEAQTKQSTSTKTFDEEASGWEPGLAGFVDDEWAEVGKKGKSSVLRQNP---VDTIRSPINWLFKGALRSELK---QSGKKQSSITIEPFHCLHLNLDRQDAD-QTPTFVPGTNGVARLPVPSSYTIENMIRKAFEVEVIEDANRN----PTMKRFTTMESLPVVLTLNIKRFTYHPELGP-VKLPQFVKYPTRFAFPVDVMSPTCRAENASSNSPGSSTRFQTPPVYELFAVVSHHGK--------FVVGGHYTCVCRDNKDQWFRFDDEHVASISEATALAEN------AYLLFYMR 641          
BLAST of jgi.p|Trimin1|354191 vs. uniprot
Match: H3GLU7_PHYRM (USP domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLU7_PHYRM)

HSP 1 Score: 120 bits (300), Expect = 6.790e-25
Identity = 137/445 (30.79%), Postives = 191/445 (42.92%), Query Frame = 1
Query:  364 RGMVNTGNTCYRLAVLQSLLACAP----LAE-AVLARPARRLLAAPAAAEHVPTWTALAQFWREF-------WGIGAANAGKAVNPQDT-------------LRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVER--------LVKKQAKDAEQHAVLQQA--------AVDDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPHRPPPLQLEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRIPDAHLGAKARSD--------AAKRGR------TYRLFAVVLHYGAAGXXXXXXXXXXXXXXXXXXXXXDVWYDCDDRVITPIDEADVLSPRHAHGAAPYLLFYQR 1533
            RG+VN GNTC++  +LQS+LAC P    LAE + ++ P   +LAA         W  +  F REF         + AAN  +  NP D                 VL +F+  + GEQEDA EFL +FL  LH E E+          K+  + A   AV QQA        A DD W EVG+ G ++V+ +        + S I  +F G LRSE   T   G+   S+ VEPFHCL L +      P+     G+   A     P+ ++ M+   F  EV+E        V   ++ + +ESLP VLTL +K++ +H   G  ++  + + YP  L  P   +    R++        A+  G        Y LFAVV H G                        D W+  DD  +T I EA  LS         YLL Y R
Sbjct:  114 RGLVNQGNTCFQNVILQSVLACPPFLNLLAEISTVSPPTPEMLAA---ISDFKAWRHMVAFTREFEEPTLAQLQLQAANGER--NPNDMHGKIPQAIRISGYFMDVLSAFQ-KMRGEQEDALEFLEFFLEYLHTEYEKSGLELPASCEKQTKRSASVPAVKQQADAAFENAQAFDDGWAEVGKKGKSSVLRQNP---VDTIRSPINWLFKGALRSELKQT---GKRQSSITVEPFHCLHLNLDYEAQDPSF--VTGTNGLAKPLTAPITIKEMIRKSFDVEVIEDANQ----VPTMKKFTTVESLPVVLTLSVKRFTYHPEQGP-VKLQQFVKYPPFLEFPAQFMSTTCRAENGMDVPGAASISGAGFSTPPMYELFAVVSHLGK--------FVVGGHYTCVCRDNKDQWFRYDDEHVTSISEATALSE------TAYLLLYIR 525          
BLAST of jgi.p|Trimin1|354191 vs. uniprot
Match: D0N4H4_PHYIT (Ubiquitin-specific protease, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N4H4_PHYIT)

HSP 1 Score: 118 bits (295), Expect = 3.030e-24
Identity = 136/443 (30.70%), Postives = 193/443 (43.57%), Query Frame = 1
Query:  364 RGMVNTGNTCYRLAVLQSLLACAP----LAE-AVLARPARRLLAAPAAAEHVPTWTALAQFWREF-------WGIGAANAGKAVN------PQDT-----LRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVERL-------VKKQ--------AKDAEQHAVLQQA-AVDDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPHRPPPLQLEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRIPDAHLGAKARSD--------AAKRGR------TYRLFAVVLHYGAAGXXXXXXXXXXXXXXXXXXXXXDVWYDCDDRVITPIDEADVLSPRHAHGAAPYLLFYQR 1533
            RG+VN GNTC++  ++QS+LAC P    LAE +  + P   +LA+ +  +    W  +  F REF         + AAN  + +N      PQ          VL +F+  + GEQEDA EFL +FL  LH E E+         +KQ        AK AE     + A A DD W EVG+ G ++V+ +        + S I  +F G LRSE     Q G+   S+ VEPFHCL L +      P+     G Y  A     P+ ++ M+   F  EV+E        +   ++ + +ESLP VLTL +K++ +H   G  ++  + + YP  L  P   +    R++        AA  G        Y LFAVV H G                        D W+  DD  +T I EA  LS         YLL Y R
Sbjct:  129 RGLVNQGNTCFQNVIMQSVLACPPFLNLLAEISSTSPPTAEMLASTSTFK---AWRHMVAFTREFEEPTLAQLQLQAANGERNLNDMHGKTPQAIRISGYFMDVLSAFQ-KMRGEQEDALEFLEFFLEYLHTEYEKSGLELPSSCEKQTKRRPSTAAKPAEADVAFENAQAFDDGWAEVGKKGKSSVLRQNP---VDTIRSPINWLFKGALRSELK---QNGKRQSSITVEPFHCLHLNLDYETQDPSF--VTGVYGLAKPLSAPITIQDMIRKSFDVEVIEDANQ----IPTMKKFTTVESLPVVLTLSVKRFTYHPEQGP-VKLQQFVKYPPFLEFPTQFMSTTCRAENGMDVPGAAAISGAGFSTPPMYELFAVVSHLGK--------FVIGGHYTCVCRDNKDQWFRYDDEHVTSISEATALSE------TAYLLLYIR 540          
BLAST of jgi.p|Trimin1|354191 vs. uniprot
Match: G5A4W2_PHYSP (USP domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A4W2_PHYSP)

HSP 1 Score: 118 bits (295), Expect = 3.090e-24
Identity = 136/443 (30.70%), Postives = 188/443 (42.44%), Query Frame = 1
Query:  364 RGMVNTGNTCYRLAVLQSLLACAP----LAEAVLAR-PARRLLAAPAAAEHVPTWTALAQFWREFWGIGAAN-----AGKAVNPQDT-------------LRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVE---------------RLVKKQAKDAEQHAVLQQA-AVDDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPHRPPPLQLEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRIPDAHLGAKARSD--------AAKRGR------TYRLFAVVLHYGAAGXXXXXXXXXXXXXXXXXXXXXDVWYDCDDRVITPIDEADVLSPRHAHGAAPYLLFYQR 1533
            RG+VN GNTC++  ++QS+LAC P    LAE   A  P   ++A+ +  +    W  +  F REF     A      A    NP D                 VL +F+  + GEQEDA EFL +FL  LH E E               R   K+   A   A L+ A A DD W EVG+ G ++V+ +        + S I  +F G LRSE     Q G+   S+ VEPFHCL L +      P+     G+   A     P+ +E M+   F  EV+E V      V   ++ + +ESLP VLTL +K++ +H   G  ++  + + YP  L  P   +    R++        A+  G        Y LFAVV H G                        D W+  DD  +T I EA  LS         YLLFY R
Sbjct:  125 RGLVNQGNTCFQNVIMQSVLACPPFLNLLAEISAATAPTSEMMASTSTFK---AWRHMVAFAREFEEPTLAQLHLQAASGERNPNDMHGKVPQAIRISGYFMDVLSAFQ-KMRGEQEDALEFLEFFLEYLHSEYEKSGLELPASCEEQTKRSAAKKQNGAVVDADLENAQAFDDGWAEVGKKGKSSVLRQNP---VDTIRSPINWLFKGALRSELK---QNGKRQSSITVEPFHCLHLNLDYEAQDPSF--VTGANGLAKPLSTPITIEEMIRKSFDVEVIEDVNQ----VPTMKKFTTVESLPVVLTLSVKRFTYHPEQGP-VKLQQFVKYPPSLEFPTQFMSTTCRAENGMDIPGVASISGAGFSTPPMYELFAVVSHLGK--------FVVGGHYTCVCRDNKDQWFRYDDEHVTSISEATALSE------TAYLLFYIR 536          
BLAST of jgi.p|Trimin1|354191 vs. uniprot
Match: A0A484EC73_BRELC (USP domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EC73_BRELC)

HSP 1 Score: 116 bits (290), Expect = 1.170e-23
Identity = 125/434 (28.80%), Postives = 185/434 (42.63%), Query Frame = 1
Query:  364 RGMVNTGNTCYRLAVLQSLLACAPLAEAVLARPA-----RRLLAAPAAAEHVPTWTALAQFWREFWGIGAAN--------------AGKAVNPQDTLRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEV-----------ERLVKKQAKDAEQHAVLQQAAV-DDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPHRPPPLQLEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRIPDAHLGAKARSD-------------AAKRGRTYRLFAVVLHYGAAGXXXXXXXXXXXXXXXXXXXXXDVWYDCDDRVITPIDEADVLSPRHAHGAAPYLLFYQR 1533
            RG+VN GNTC++  +LQS+LAC P    ++A  +       +LA+ +  +    W  +  F REF     A                 +A+        VL +F+  + GEQEDA EFL +FL  LH E            E   +++A   E +  ++ A   +D W EVG+ G ++++ +       +  S I  +F GTLRSE  H+   G+   S+ VEPFHCL L +    +  +R          P +  PL +E M+   F  EV+E +        R  + + +ESLP VLTL +K++++H   G  ++  R + Y   L  P   L    R++             A      Y LFAVV H G                        D W+  DD  +T I EA  LS         YLLFY R
Sbjct:  118 RGLVNQGNTCFQNVILQSVLACPPFLNLLVALSSFCPSTSNMLASTSTFK---AWRHMVAFTREFEEPTLAQLQLDEHSLHDVHRKTPQAIRISGYFMDVLSAFQ-KMRGEQEDALEFLEFFLEYLHTEYDQSGLVLPTSCEHQTRRKAVQNETNESIEMAQTNEDGWAEVGKKGKSSLLRQNL---VDSFRSPINWLFKGTLRSEIKHS---GKRQSSITVEPFHCLHLNLVF-KSHDSRSFLSAVNSSTPSQSSPLTIEDMIRESFAVEVIEDIHA----TPRMTKVTTVESLPVVLTLTVKRFSYHPEQGP-VKLQRFVKYSPLLEFPVHFLSTPCRAENGIDDPNNLASSIAFTSPPMYELFAVVSHLG--------DFVVGGHYTCVCRDNKDQWFRYDDEHVTSISEATALSE------TAYLLFYVR 521          
BLAST of jgi.p|Trimin1|354191 vs. uniprot
Match: A0A8E2DQH5_9APHY (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Obba rivulosa TaxID=1052685 RepID=A0A8E2DQH5_9APHY)

HSP 1 Score: 116 bits (290), Expect = 2.200e-23
Identity = 121/426 (28.40%), Postives = 182/426 (42.72%), Query Frame = 1
Query:  331 AANALWRGLACRGMVNTGNTCYRLAVLQSLLACAPLAEAVLARPARRLLAAPAAAEHV-----PTWTALAQFWREFW---GIGAANAGKAVNPQDTLRQVLG--------------SFRGAVAGEQEDAEEFLAYFLGKLHDEVERLVKKQAKDAEQHAVLQQAAVDDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPH--RPPPLQLEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRI-PDAHLGAKARSDAAKRGRTYRLFAVVLHYGAAGXXXXXXXXXXXXXXXXXXXXXDVWYDCDDRVITPIDEADVLSPRHAHGAAPYLLFYQR 1533
            AA A+ + L  RG+VNTGN C+  AVLQ L+ C P  +  L    R+ L++PA A+ V     P   A  QF +EF      G+ + GK    ++   ++                 F   + G QEDAEEFL +FL  L +E+  L    +  A      ++   D+ W EVG+   A V+ R  +      ES ITR+F G  RS    T +  R   SV+VE +  L+L +        R      +    H   P P+Q+ +       G V+E           A +Q+ +E+LP VL L LK++ +    G  ++ G+ + +  EL I PD     +  +   K    Y+LFAV+ H+G +                        W   DD +++ I   DV           YLLFY+R
Sbjct:  491 AAAAVPQRLRPRGLVNTGNMCFANAVLQILVYCPPFHK--LFSELRKYLSSPAGAQRVGAQATPLVDATMQFLKEFLPEPAEGSDSRGKGKEREEDFDELDSFIPTYVYDAMKEKKRFANMIGGHQEDAEEFLGFFLDTLEEELLSLANSLSSRAPTAPEREEPQKDEGWHEVGKKNKA-VLTRMIKT----TESPITRIFGGKFRS----TLRAPRQRDSVIVEDWRSLRLDI-------QRDQVNSIHDALKHISDPQPVQITSPTQP---GAVIE-----------ASQQALIEALPPVLVLHLKRFLYDTTIGDVVKVGKQVTFTPELDIAPDLLAPTRRTAHPVK----YQLFAVLNHHGLSASGGHYTLDVLHPNRGLSERPRPGWIRIDDELVSDIRNEDVFGGSETSDRCAYLLFYRR 880          
BLAST of jgi.p|Trimin1|354191 vs. uniprot
Match: A0A3M6VK62_9STRA (USP domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VK62_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.310e-23
Identity = 134/445 (30.11%), Postives = 186/445 (41.80%), Query Frame = 1
Query:  364 RGMVNTGNTCYRLAVLQSLLACAPLAEAVLARPARRLLAAPAAAEHVPT---WTALAQFWREFWGIGAA------------------NAGKAVNPQDTLRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVERL-------VKKQAK-----------DAEQHAVLQQA-AVDDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRG-APHRPPPLQLEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRIPDAHLGAKARSD--------AAKRGR------TYRLFAVVLHYGAAGXXXXXXXXXXXXXXXXXXXXXDVWYDCDDRVITPIDEADVLSPRHAHGAAPYLLFYQR 1533
            RG+VN GNTC++  +LQS+LAC P    +LA  +    + P     + T   W  +  F REF     A                  N  +A+        VL +F+  + GEQEDA EFL +FL  LH E E+         +KQ K           D +     ++A A DD W EVG+ G ++V+ +     A  + S I  +F G LRSE     Q G+   S+ VEPFHCL L +   D     P       G A     P+ +E M+   F  EV+E        V   ++ + +ESLP VLTL +K++ +H   G  ++  + + YP  L  P   + A  R +        A+  G        Y LFAVV H G                        D WY  DD  +T I EA  LS       + YLL Y R
Sbjct:  115 RGLVNQGNTCFQNVILQSVLACPPFVN-LLAEISTLSPSTPEMLASISTFKAWRHMVAFTREFEEPTLAQLQQPAASGERNLNDMHGNVPQAIRISGYFMDVLSAFQ-KMRGEQEDALEFLEFFLEYLHTEYEKSGLKLPTSCEKQTKRIVAASVTKQNDTDSDGAFEKAQAFDDGWAEVGKKGKSSVLRQNF---ANTIPSPINWLFKGALRSELK---QNGKRQSSITVEPFHCLHLTL---DYEVQDPSYVTGVNGVAKPLGAPVTVEEMIRKSFDVEVIEDANQ----VPIMKKYTTVESLPVVLTLSVKRFTYHPEQGP-VKLQQVVKYPPFLEFPTQFMSASCRVENGMDVSGVASISGSGFSTPPMYELFAVVSHLGK--------FVVGGHYTCVCRDNKDQWYRYDDEHVTSISEAMALSE------SAYLLLYIR 529          
BLAST of jgi.p|Trimin1|354191 vs. uniprot
Match: A0A2P4Y1B1_9STRA (Ubiquitin-specific protease n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y1B1_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.220e-22
Identity = 135/446 (30.27%), Postives = 189/446 (42.38%), Query Frame = 1
Query:  364 RGMVNTGNTCYRLAVLQSLLACAP----LAEAVLARPARRLLAAPAAAEHVPTWTALAQFWREF-------WGIGAANAGKAVNPQDT-------------LRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVERL-----------VKKQAKDAEQH----AVLQQAAV-DDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPHRP--PPLQLEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRIPDAHLGAKARSD--------AAKRGR------TYRLFAVVLHYGAAGXXXXXXXXXXXXXXXXXXXXXDVWYDCDDRVITPIDEADVLSPRHAHGAAPYLLFYQR 1533
            RG+VN GNTC++  ++QS+LAC P    LA+   A P    + A  +      W  +  F REF         + AAN  +  NP D                 VL +F+  + GEQEDA EFL +FL  LH E E+             K+ AK A +     A  + A   DD W EVG+ G ++V+ +        + S I  +F G LRSE     Q G+   S+ VEPFHCL L +   D   A+ P+  +      +P   P  +E M+   F  EV+E        V   ++ + +ESLP VLTL +K++ +H   G  ++  + + YP  L  P   +    R++        A   G        Y LFAVV H G                        D W+  DD  +T I EA  LS         YLLFY R
Sbjct:  117 RGLVNQGNTCFQNVIMQSVLACPPFLNLLADISTASPPTPEMLASTST--FKAWRHMVAFTREFEEPTLAQLQLQAANGER--NPNDMHGKVPQAIRISGYFMDVLSAFQ-KMRGEQEDALEFLEFFLEYLHTEYEKSGLELPSSCEKQTKRNAKLANKQNGTDAAFENAQTFDDGWAEVGKKGKSSVLRQNP---VDTILSPINWLFKGALRSELK---QNGKRQSSITVEPFHCLHLNL---DYE-AQDPSFVTGANGLTKPLSTPTTIEDMIQKSFAVEVIEDANQ----VPMMKKHTTVESLPVVLTLSIKRFTYHPEQGP-VKLQQFVKYPPFLEFPTQFMSTTCRAENGMDVPGVAPISGAGFSTPPMYELFAVVSHLGK--------FVVGGHYTCVCRDNKDQWFRYDDEYVTSISEATALSE------TAYLLFYIR 528          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354191 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CGA5_9STRA0.000e+0100.00USP domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5JV52_9PHAE7.960e-2635.58USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
K3XBS3_GLOUD1.310e-2529.71USP domain-containing protein n=1 Tax=Globisporang... [more]
H3GLU7_PHYRM6.790e-2530.79USP domain-containing protein n=1 Tax=Phytophthora... [more]
D0N4H4_PHYIT3.030e-2430.70Ubiquitin-specific protease, putative n=2 Tax=Phyt... [more]
G5A4W2_PHYSP3.090e-2430.70USP domain-containing protein n=1 Tax=Phytophthora... [more]
A0A484EC73_BRELC1.170e-2328.80USP domain-containing protein n=1 Tax=Bremia lactu... [more]
A0A8E2DQH5_9APHY2.200e-2328.40Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Obba... [more]
A0A3M6VK62_9STRA2.310e-2330.11USP domain-containing protein n=2 Tax=Peronospora ... [more]
A0A2P4Y1B1_9STRA1.220e-2230.27Ubiquitin-specific protease n=1 Tax=Phytophthora p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_216contigContig_216:135962..142872 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354191|estExt_Genemark1.C_Ctg_2160009
BRITEko00000,ko00001,ko01000,ko01002,ko04121
KEGG Pathwayko04139,map04139
KEGG koko:K11841
EC3.4.19.12
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016579,GO:0019538,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0070646,GO:0070647,GO:0071704,GO:1901564
Preferred nameUBP24
Descriptionubiquitinyl hydrolase activity
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1871@1|root,KOG1871@2759|Eukaryota
Evalue1.13e-32
Seed ortholog2880.D7FJX3
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionPeptidase C19, ubiquitin carboxyl-terminal hydrolase
Ec32 orthologEc-10_000790.1
TranscriptId354513
TrackFilteredModels1
ProteinId354191
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354191gene_18089Tribonema minus UTEX_B_3156 geneContig_216 135962..142872 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354191Trimin1|354191|estExt_Genemark1.C_Ctg_2160009Tribonema minus UTEX_B_3156 polypeptideContig_216 135962..142644 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18089_1exon_18089_1Tribonema minus UTEX_B_3156 exonContig_216 135962..135986 +
exon_18089_2exon_18089_2Tribonema minus UTEX_B_3156 exonContig_216 136518..137065 +
exon_18089_3exon_18089_3Tribonema minus UTEX_B_3156 exonContig_216 137324..137488 +
exon_18089_4exon_18089_4Tribonema minus UTEX_B_3156 exonContig_216 139104..139180 +
exon_18089_5exon_18089_5Tribonema minus UTEX_B_3156 exonContig_216 140334..140426 +
exon_18089_6exon_18089_6Tribonema minus UTEX_B_3156 exonContig_216 141230..141550 +
exon_18089_7exon_18089_7Tribonema minus UTEX_B_3156 exonContig_216 141823..142041 +
exon_18089_8exon_18089_8Tribonema minus UTEX_B_3156 exonContig_216 142545..142872 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18089CDS_18089Tribonema minus UTEX_B_3156 CDSContig_216 135962..135986 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_18089UTR3_18089Tribonema minus UTEX_B_3156 three_prime_UTRContig_216 142645..142872 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18089 ID=mRNA_18089|Name=jgi.p|Trimin1|354191|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1776bp|location=Sequence derived from alignment at Contig_216:135962..142872+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTCCTTCAGCTTCAGCTTCGCGCGGAAGGCCGCGCCAACCAACTG
GGCAGCTCTGGTCAAAGCTCCCCCAGGGCAGCGACAGCCCTCGCAGGCAG
CAGCAGCAGCAGCAGCGGCAGCGGCACCGCTGTCAAAGAGTGGCGCGAGT
GCGCGCAGACCCGTATTGGAGAGTCCGCCTCCAGAGCCGCTCTGCGTCTC
CGAAGACCAGTGGCTTGAGCAAGCTCTGGCGGCGCTGGGCCCGTCGTCCA
AAGCTAGCGCGTCGCCGGCGCAGCTCGCGAGCGCGCAGCAGCAGCAGCAG
CAGAAACAGGACACGGCTGAGGCGGAGGCGGCGGCGAATGCGCTGTGGCG
CGGCCTCGCGTGCAGGGGCATGGTGAACACGGGCAACACGTGCTACAGGC
TGGCGGTGCTGCAGAGCCTGCTGGCGTGCGCGCCGCTGGCGGAGGCGGTG
CTCGCGCGCCCTGCGCGCCGCCTGCTCGCCGCGCCCGCCGCCGCGGAGCA
CGTGCCGACGTGGACGGCGCTGGCGCAGTTCTGGCGAGAGTTCTGGGGCA
TAGGAGCAGCCAACGCCGGCAAGGCGGTGAACCCCCAGGACACACTGAGG
CAGGTGCTGGGGAGTTTTAGGGGGGCGGTGGCAGGGGAGCAGGAGGACGC
GGAGGAGTTCCTGGCGTATTTTCTGGGGAAGTTGCACGACGAGGTGGAGC
GGCTGGTTAAGAAACAGGCCAAGGATGCCGAGCAACACGCGGTTTTGCAG
CAGGCGGCGGTGGACGACGAGTGGCAAGAAGTGGGGAGAGGCGGGGTGGC
GGCCGTTGTGAATAGGCAAGCGGAGGCGCGCGCCGCCGCTGTGGAGTCCG
TCATCACCCGCGTCTTCCACGGGACGCTGCGCTCAGAGGCAAGTCACACG
TCGCAGTTAGGCCGTGCCCCCCTCTCCGTCATGGTGGAGCCCTTCCACTG
CCTGCAGCTGCCGGTGCCCCCCCCGGACGCCCCCCCCGCCAGACCCCCCG
CTGGCGGCAGTTACAGGGGCGCGCCGCATCGGCCGCCGCCGCTGCAACTG
GAGGCGATGCTCGCGGCGTTCTTCGGGGGGGAGGTGCTGGAGGGGGTGAG
GGGGGGGGGGCGGGGGGTCGTGCGCGCGCAGCGCCAGAGCGCGCTGGAGT
CGCTGCCGCGCGTCCTCACGCTGCAGCTCAAGCAGTACGCGTTCCACAGG
GCGCACGGCACGGCGCTGCGCACGGGCAGGCCCATCGCGTACCCGCTCGA
GCTGCGCATCCCCGACGCGCACCTGGGCGCGAAGGCGCGCTCTGACGCTG
CCAAGCGCGGCCGCACTTACCGCCTCTTCGCTGTGGTGTTGCACTACGGT
GCCGCGGGCGCCGCGGCGTCGTCAGGGCACTACACGGCGCTGGTCAGACG
TGGCGGCGGCGGCGGTGGCGGTGATGTGTGGTACGATTGCGACGACAGGG
TGATCACGCCGATCGACGAAGCGGACGTCCTGTCGCCGCGGCATGCACAC
GGCGCCGCGCCCTACCTCCTCTTCTACCAGCGCCAGCTGCCGGCGTAGCG
GCGCGACGAGGGCTTGGGTTGCTGAGCGTTGCTGCACGTCGCGAGGCAGA
AAAAGTGTCCAGCGAGGTTTACATGAAAGACTGAATGGCCTGCGAACATG
CCTGAGGTCTCGCCTGCACAGCGTCGACTCTCATCAAAGAGAAACGTTGT
GATGAGCATCACGCGGAGCAGCGATTGGGCTTCCCCCAATTCGAGGCGCT
CGTGACGAGGCGTTAATAATGCGAGA
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protein sequence of jgi.p|Trimin1|354191

>Trimin1|354191|estExt_Genemark1.C_Ctg_2160009 ID=Trimin1|354191|estExt_Genemark1.C_Ctg_2160009|Name=jgi.p|Trimin1|354191|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=516bp
MASFSFSFARKAAPTNWAALVKAPPGQRQPSQAAAAAAAAAAPLSKSGAS
ARRPVLESPPPEPLCVSEDQWLEQALAALGPSSKASASPAQLASAQQQQQ
QKQDTAEAEAAANALWRGLACRGMVNTGNTCYRLAVLQSLLACAPLAEAV
LARPARRLLAAPAAAEHVPTWTALAQFWREFWGIGAANAGKAVNPQDTLR
QVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVERLVKKQAKDAEQHAVLQ
QAAVDDEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHT
SQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPHRPPPLQL
EAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHR
AHGTALRTGRPIAYPLELRIPDAHLGAKARSDAAKRGRTYRLFAVVLHYG
AAGAAASSGHYTALVRRGGGGGGGDVWYDCDDRVITPIDEADVLSPRHAH
GAAPYLLFYQRQLPA*
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mRNA from alignment at Contig_216:135962..142872+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18089 ID=mRNA_18089|Name=jgi.p|Trimin1|354191|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6911bp|location=Sequence derived from alignment at Contig_216:135962..142872+ (Tribonema minus UTEX_B_3156 )
ATGGCGTCCTTCAGCTTCAGCTTCGGTGACTTCGACGAGGATGATCTCGC AGAGCTCGCTATCTCAGAGGCTCATGCACAAACATCGCAAGCAACAGCGG CAGAAGCAGAATCATCTGCAGCCGCACATCAGGAGCCGAGTGCAGCAAAT ACAGCTTCCACTGCCCCTGCTGTCAAGTCACCGGTGAGCAGGACAGCTGC TGTCATCAATGAGGAAAGTGCACAAGACGCTGCGTTGAGTAAATCGCCAA AAGCTGCGGCCTCAGAGCCAATACTTCTAACGCAATCAGCAGCACCTGGA ATAGCGAGAGAAGCTGCCAGGACAACGGCACCTCAACCAGCTGCAGCGCC GCCAACACAGTCAGTGGCGTCGAATGCAGCACCGACTCAAACGGAAGCCC AAGAACCATCTACAGAAGCAGGATTCGAACCAGCGGTGCAGCCAGCAGCA GAGGTCCCGCTGTCGCAGGCAGCACAACCACAGCCACCGACAGCACCACC GGCAGTAAACGCGGCGCCAACGCAAGATCAGGCGCGCTCTCCACCACCGC CCGCAGCGCGGAAGGCCGCGCCAACCAACTGGGCAGCTCTGGTCAAAGCT CCCCCAGGGCAGCGACAGCCCTCGCAGGCAGCAGCAGCAGCAGCAGCGGC AGCGGCACCGCTGTCAAAGAGTGGCGCGAGTGCGCGCAGACCCGTATTGG AGAGTCCGCCTCCAGAGCCGCTCTGCGTCTCCGAAGACCAGTGGCTTGAG CAAGCTCTGGCGGCGCTGGGCCCGTCGTCCAAAGCTAGCGCGTCGCCGGC GCAGCTCGCGAGCGCGCAGCAGCAGCAGCAGCAGAAACAGGACACGGCTG AGGCGGAGGCGGCGGCGAATGCGCTGTGGCGCGGCCTCGCGTGCAGGGGC ATGGTGAACACGGGCAACACGTGCTACAGGCTGGCGGTGCTGCAGAGCCT GCTGGCGTGCGCGCCGCTGGCGGAGGCGGTGCTCGCGCGCCCTGCGCGCC GCCTGCTCGCCGCGCCCGCCGCCGCGGAGCACGTGCCGACGTGGACGGCG CTGGCGCAGTTCTGGCGAGAGTTCTGGGGCATAGGAGCAGCCAACGCCGG CAAGGTGCGCGCTCGCTCGACATGAGTCATGAGTCGTGAGTAACGTAGCG TCGTCGCTGTCACGAGGCGACACATGCGCGCTTGCTTTCGCGCGCGTGGC GTGTCCCCCAGGACTGTGCTTCTCGATGCGCGCCTGGTTTCGATGTCTGC TGTGGCTTTGCCGCGTGTTTGGTTGGCAGCGCCGGCACCGTTCAAACACC GCCAGGACAGAGTCTTGTCGCCTCACTTATTCTGTCGGTTGCCGTGCTGA TCGCTGAAGCAGGCGGTGAACCCCCAGGACACACTGAGGCAGGTGCTGGG GAGTTTTAGGGGGGCGGTGGCAGGGGAGCAGGAGGACGCGGAGGAGTTCC TGGCGTATTTTCTGGGGAAGTTGCACGACGAGGTGGAGCGGCTGGTTAAG AAACAGGCCAAGGATGCCGAGCAACACGTGAGTAGTATAAGCGCGGCTCA GTGAACAGCATTGAAGTGCTGCCGTATTGTACTGTCGCTATTATGTGTAC TGTTGTTTTCAAGAAGCAGGCCAAGGATGCTGAGCAACACGTGAGTAGCG GGTCGCGCGCGCGGTCAGCATCATTAGCTGAGCAAACACCATTGAAGTAA TGCCGTACTGTGCTGCACTGTACTGTTGCTGTTGCGTAATTGTAGGTACA GTTGCGCGAGTGCTGTAACAGCGGCCAAGGACGCCGAGCACCACGTGAGT GGGCGTACACGCGCGCGGCTGAGTGAGCAGCATTGAAGCGATGCCCTACT GTATTTTCACTGTTACGTATACGTACAGTTGCGCAACGAGTACTTCAAAG TATACTGTACATGTACAGTTGCGTATACTGTAACGGTGACCACCGCATGC CCTGTGAAGAAACAGGCGAAGGATGCAGAGCAACACCTGAGTAAAGTAAG CACGGCTTAGTGAACAGCAGTGAAGTGATGCCATACTGCGCATAAGGCCT ACGCATGCGCAGCTGAGTGAACAGTATTGATGTGGTGCCTCAGTGTATTG TTACTGTTGCGTGTACTGTTGCATAACAATATAATGCAACAGCGGCAAAG GATGCTGAGCAGCACGTGAGTAGGCGTGCGTGCGCGCGCGGCTGAGGGAG CAGCATCAAAGTGATCCCCTCCTGCATTGTCGAAGTTACGTACTTGAAGT ATATGTACAGGTGCGTCACAAGTACATACTTACGAAGTACACTGTAACAG CGACGACACAGTTGCTGTTGCGTATAGGTACAGTACAAATGCGTACTATA TATACTGCAACGGTGTCTACAGTATGTGCTGCCGTTTCCCACCAACTGAC GCAACTGCACCGACAGCGCCGCCACTGCTCAGTAGTACTTGTTGCCACTG CTCAGTAACTGCAGCAGCAATCAGCGACTTGTGTACCCCCCAGCTGCATG CAGTGCATTCTGCATTGCTTGGCGGTTGTCACACTGTGCAAGTTAGCTGG GTCAAGCTGACAGCAGCAGTCAACTCGCGGCGGTCGTGACGTGGCTGTAG CACCACAGATGGTGGATTGTGGTGTGTCAAGGGGCCCTGCGAAGGGGCTT CAGAATGGGAAGACTCAGAACGTGTTCACATCACTTCAATGTGAAGTGTG TCATGTTCAAGTCTGCTCGACTGCTTCTGGCTTTATTTTGATCTCATCAG TGATTCTCAGTGCATCATGCTCAACTGTGCTTCAGGCGTTGGCGAACTTA ATCTCACTTCACTCTCTGCTTTCATTGGCGCAATGCAACAACATCAGCAC GTTGCATGTAGCAGGCCCATGGCAATGTCAGCAATGGCTTGCGGACATTG AACGTTGAGAGTTTCATGCCTACATACATTTGCACATATGCTCGCACACT TTGATGTCTATGAACGCATGTGCGCATGTATCTACACTTGCGTACGTTTG CCCAGCATGGTTGCGCAGACTTCAAATCACAATCACATACGCATGTATAT ACACGCAGGTACGTGCATGCGTGCATACCCATTTACAAGTACTGACGTAC ATACATGTATGATGCACCTGTCACGCCACTGCGCCTTCGCAGGCGGTTTT GCAGCAGGCGGCGGTGGACGACGAGTGGCAAGAAGTGGGGAGAGGCGGGG TGGCGGCCGTTGTGAATAGGTGAGCCTTGTGTGCACGCTGACCCAAGTCA ACCTTAACTTTAACAATGTACATACCCTATCCAACTCAATGTCTTTGATG TATGCAACCATGAGGTTGGTGCGCGTTCTGTGTGCATTCTGGCCCTGACC CTAACCACGTAAACACTGCACAAACGTAACATGAGGTCTAATGCCAGTGT TGTTGGTCAGTGACCAATGGTCACTGAGATCACTTGCAGCTGTGTAGAAA GCGCAGCACAGGTCATTCATTGCGGGACAGTGCCTATGATGTATGTAAAC TAATGACTTTCGATGCCCTGTGCTCCATGTAGGGTTGCAAAAAAGCGTAT TTTGAAGTTTATTGTGGAGTTCAAGTGCCCCGTTTGTGGCAGACTGTATG CTCGGAATTGAGCAGACTCACCGCATGCCCCACAAATACGCCCTTCATGC AGCATACTATCATGTTGAAGTTTGCTCACGACGTATTCCTGGTTGCCAAA TACGCCCCAAGTACGCCATATTGTGTGGCCAAATACGTTTTTTTGCAACC CTAGCTCTATGTCACTGAGGACACTCGCAGCTAGAAACGCATTACAGGTC TAATATCTGTGGCATTGGTATGTGCAGCCAAAAAAGTGGAGTCCAACATC TGTGATGTTGGTATGTGCAGCCAGAAAAACAGAGTGTCAAGTCATGCAAT GGGTGGCGTGGCCAAAGCACAGCAGGCGATTGCCCACTGCTCACACTCTG TGCCCATAGCCGGTAAAAACCCATGGTGCACCATGAGGGCAGTTCTCAGT TGGACTCAAATGCGCCGCAAAAGACGTGCTTCTGTGTGATACACTGGTGT ACCATTGTTGGTGCTGCACTGCGCGCGCAGAGTTCAAGTGGTCACTGTAG CTCTGCAGCACTACCGCAATTGCACTGCGGCGTGCCGTTTGCCTTCCAGA TGCGCGATTACGACCCAGCGAACTCAGCCATGGACTGTGATAGCATGCCA TGTGTGACCATGCCGAAATGGCGCCGTTGATGATCTTGAAGTTAGTCATG TTCATGTTGGTCACCTTCAAGCCGCAGCCGACTGCGCGCGCACAGCAGCG CCTGATAACACACCTCACGACGGTAACTAACCTCGCAGTTGAACTTCATC GCTGCGCACTGTGCGGCCGCAGGCAAGCGGAGGCGCGCGCCGCCGCTGTG GAGTCCGTCATCACCCGCGTCTTCCACGGGACGCTGCGCTCAGAGGCAAG TCACACGTCGCAGTTGTATGTACCATCTTCAGCCTCCGCCCTGACGACGT TCATCTGAATCAAACTCATCAGTTTGCACGTAAAAGGCTATGAGTGTTTC AGCCACCTCAGCGCTTGGCGTTGTCAGCGACGCCTCACTGCCGCACACAC TTAGGGTTAGGGTTTTGGGCATTGCCGTGGTGCTTTGACAGCACTGCTAC GTAGATAGCCTGGCTGCGACGATTGCCGCCATGAACAGCGCGAATCGACC TCGTGGCACTCTTGCAATACAAGCGCGCTTGCCGCACTGCGTGCGTGAGA GCTACACATGGCGTCGATAAGGCATGATTGCGCTCACTCACCCGCGATGG TACTGCCGCCACTGGCGGTGGCAAGGCATAGTTGCGCTCGCTTTCCCGTA GGTGCATTGCCGCCACTGGCGATCGTTTGCGCTCGCTTACCTGTCATGGC AACATCGCCGCTGCCGCGTCACCCCTCAGGTGCGCTGAGACCGCGCCCCG CTCTCCTACGTACGACTCTTGTTTGAAGCCTCGCGCCGAACCTCTGCGCC AATTGTCGCCATCAACAGCGCGAACCTACCCCGTGGCACTCTCGCAACAC AAGCGTGCACTCCGCGTTGCGTGCGTGAGAGCCCATAAAGCGTCGGTAAC TTGTGGTTGCGCTCTCGCTTACCTGTCGCGGCGCCGCAGCCACTGGCGGT GGCAAGGCACGGTTGCGCTCGCTAACCCGTAGGTGCATTGCCGCCACTGG CAATGGCTGCGCTTGCTCACCTGTCATGGCGCCGCCGCTGCTGCCGCATG CACCCCTCAGGTGCGCAGAGGCCGTGCCCCCCTCTCCGTCATGGTGGAGC CCTTCCACTGCCTGCAGCTGCCGGTGCCCCCCCCGGACGCCCCCCCCGCC AGACCCCCCGCTGGCGGCAGTTACAGGGGCGCGCCGCATCGGCCGCCGCC GCTGCAACTGGAGGCGATGCTCGCGGCGTTCTTCGGGGGGGAGGTGCTGG AGGGGGTGAGGGGGGGGGGGCGGGGGGTCGTGCGCGCGCAGCGCCAGAGC GCGCTGGAGTCGCTGCCGCGCGTCCTCACGCTGCAGCTCAAGCAGTACGC GTTCCACAGGGCGCACGGCACGGCGCTGCGCACGGGCAGGTGTGTATGTA TGTACGCAGCCGACTGGGGGGGAGATATGGAGTGATTGTTGCGCGGCGCA GGCCGCCGAGCGGCGCCGGCGGTCGCGTGAGGGGCCCCAGCACTACCTCA ATTCCTGACTCCATTTGACATCCACATTTCTAGCCCGCCATAGCAGACCA TATGACATCAGCTTCCACTTCAGTACGCCAGCGCTGCGATCATATCCTTA CTTCCTAACTTCAACTCCAACTTGAACTTCACCATGCCTTCCCCCCCCGT GCGTCGCGCAGGCCCATCGCGTACCCGCTCGAGCTGCGCATCCCCGACGC GCACCTGGGCGCGAAGGCGCGCTCTGACGCTGCCAAGCGCGGCCGCACTT ACCGCCTCTTCGCTGTGGTGTTGCACTACGGTGCCGCGGGCGCCGCGGCG TCGTCAGGGCACTACACGGCGCTGGTCAGACGTGGCGGCGGCGGCGGTGG CGGTGATGTGTGGTACGATTGCGACGACAGGTGAGTGGCGCATGCGTCTC CGAGTTGAAGTGAAAGTTGTGCACACTTCGACTGCGGGCTAGATGAGTGG CAAGCGTGCGCGAGACGCTGATGATTCTGATGGCGCAATGGGGGTAGTTT GATAGGGGTAGTTGATCTTTGCTGAAAAGACGCGCAGCGAGCACTGGACG GAGCGCTGGTGGTGCGGTGGTGGTGCGGCGTGGCGCGGTGCCGGCGAGGC GCCGCAGAGATCGTGGTAGTTCTGCATGTTGAGCAGTATTCGGGTTAGGG TTAGGTTAGGTTTAGCAAAGAGGGCTTCGCTACCGCACCGTACACGATTC GTTCTGAAACACCCGCCCAAAACAGCAGCACATCTACTTCACACGTACTG CACTTGAGTGCTTCTCAACGAACTGCTCAACAGCACCTGCGTTTTCGTGT GGAGCCAGCATCACATCTGAAGAGGACTCAACGCGAGAGTAATGGAACAC GCCCTCTGCTTCACTCCTCATGCGTGCCTGCAGGGTGATCACGCCGATCG ACGAAGCGGACGTCCTGTCGCCGCGGCATGCACACGGCGCCGCGCCCTAC CTCCTCTTCTACCAGCGCCAGCTGCCGGCGTAGCGGCGCGACGAGGGCTT GGGTTGCTGAGCGTTGCTGCACGTCGCGAGGCAGAAAAAGTGTCCAGCGA GGTTTACATGAAAGACTGAATGGCCTGCGAACATGCCTGAGGTCTCGCCT GCACAGCGTCGACTCTCATCAAAGAGAAACGTTGTGATGAGCATCACGCG GAGCAGCGATTGGGCTTCCCCCAATTCGAGGCGCTCGTGACGAGGCGTTA ATAATGCGAGA
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Coding sequence (CDS) from alignment at Contig_216:135962..142872+

>mRNA_18089 ID=mRNA_18089|Name=jgi.p|Trimin1|354191|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1548bp|location=Sequence derived from alignment at Contig_216:135962..142872+ (Tribonema minus UTEX_B_3156 )
ATGGCGTCCTTCAGCTTCAGCTTCGCGCGGAAGGCCGCGCCAACCAACTG
GGCAGCTCTGGTCAAAGCTCCCCCAGGGCAGCGACAGCCCTCGCAGGCAG
CAGCAGCAGCAGCAGCGGCAGCGGCACCGCTGTCAAAGAGTGGCGCGAGT
GCGCGCAGACCCGTATTGGAGAGTCCGCCTCCAGAGCCGCTCTGCGTCTC
CGAAGACCAGTGGCTTGAGCAAGCTCTGGCGGCGCTGGGCCCGTCGTCCA
AAGCTAGCGCGTCGCCGGCGCAGCTCGCGAGCGCGCAGCAGCAGCAGCAG
CAGAAACAGGACACGGCTGAGGCGGAGGCGGCGGCGAATGCGCTGTGGCG
CGGCCTCGCGTGCAGGGGCATGGTGAACACGGGCAACACGTGCTACAGGC
TGGCGGTGCTGCAGAGCCTGCTGGCGTGCGCGCCGCTGGCGGAGGCGGTG
CTCGCGCGCCCTGCGCGCCGCCTGCTCGCCGCGCCCGCCGCCGCGGAGCA
CGTGCCGACGTGGACGGCGCTGGCGCAGTTCTGGCGAGAGTTCTGGGGCA
TAGGAGCAGCCAACGCCGGCAAGGCGGTGAACCCCCAGGACACACTGAGG
CAGGTGCTGGGGAGTTTTAGGGGGGCGGTGGCAGGGGAGCAGGAGGACGC
GGAGGAGTTCCTGGCGTATTTTCTGGGGAAGTTGCACGACGAGGTGGAGC
GGCTGGTTAAGAAACAGGCCAAGGATGCCGAGCAACACGCGGTTTTGCAG
CAGGCGGCGGTGGACGACGAGTGGCAAGAAGTGGGGAGAGGCGGGGTGGC
GGCCGTTGTGAATAGGCAAGCGGAGGCGCGCGCCGCCGCTGTGGAGTCCG
TCATCACCCGCGTCTTCCACGGGACGCTGCGCTCAGAGGCAAGTCACACG
TCGCAGTTAGGCCGTGCCCCCCTCTCCGTCATGGTGGAGCCCTTCCACTG
CCTGCAGCTGCCGGTGCCCCCCCCGGACGCCCCCCCCGCCAGACCCCCCG
CTGGCGGCAGTTACAGGGGCGCGCCGCATCGGCCGCCGCCGCTGCAACTG
GAGGCGATGCTCGCGGCGTTCTTCGGGGGGGAGGTGCTGGAGGGGGTGAG
GGGGGGGGGGCGGGGGGTCGTGCGCGCGCAGCGCCAGAGCGCGCTGGAGT
CGCTGCCGCGCGTCCTCACGCTGCAGCTCAAGCAGTACGCGTTCCACAGG
GCGCACGGCACGGCGCTGCGCACGGGCAGGCCCATCGCGTACCCGCTCGA
GCTGCGCATCCCCGACGCGCACCTGGGCGCGAAGGCGCGCTCTGACGCTG
CCAAGCGCGGCCGCACTTACCGCCTCTTCGCTGTGGTGTTGCACTACGGT
GCCGCGGGCGCCGCGGCGTCGTCAGGGCACTACACGGCGCTGGTCAGACG
TGGCGGCGGCGGCGGTGGCGGTGATGTGTGGTACGATTGCGACGACAGGG
TGATCACGCCGATCGACGAAGCGGACGTCCTGTCGCCGCGGCATGCACAC
GGCGCCGCGCCCTACCTCCTCTTCTACCAGCGCCAGCTGCCGGCGTAG
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