mRNA_18060 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|131052 vs. uniprot
Match: A0A835Z240_9STRA (OTU domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z240_9STRA) HSP 1 Score: 274 bits (701), Expect = 1.820e-93 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1 Query: 1 YTLHNLGYTLVTEDGDGACLFRAIARYVFNDPSLHHLVRTATATYNYITMTAPMIAEAGTPEQYYRSRLDPRTWGDNVEVQGAAALFGITVVVFHTTDDVSYTMSQLYNNASQHPWPLVLSLHGQYHYNSLL 396 YTLHNLGYTLVTEDGDGACLFRAIARYVFNDPSLHHLVRTATATYNYITMTAPMIAEAGTPEQYYRSRLDPRTWGDNVEVQGAAALFGITVVVFHTTDDVSYTMSQLYNNASQHPWPLVLSLHGQYHYNSLL Sbjct: 1 YTLHNLGYTLVTEDGDGACLFRAIARYVFNDPSLHHLVRTATATYNYITMTAPMIAEAGTPEQYYRSRLDPRTWGDNVEVQGAAALFGITVVVFHTTDDVSYTMSQLYNNASQHPWPLVLSLHGQYHYNSLL 132
BLAST of jgi.p|Trimin1|131052 vs. uniprot
Match: A0A7E4W8B0_PANRE (Deubiquitinating enzyme A n=2 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4W8B0_PANRE) HSP 1 Score: 57.8 bits (138), Expect = 3.980e-7 Identity = 39/120 (32.50%), Postives = 61/120 (50.83%), Query Frame = 1 Query: 43 GDGACLFRAIARYVFNDPSLHHLVRTATATYNYITMTAPMIAEAGTP--EQYYRSRLDPRTWGDNVEVQGAAALFGITVVVFHTTDDVSYTMSQLYNNAS---QHPWPLVLSLHGQYHYN 387 GDGAC+FRA+A+ VF H VR YI+ ++ T E Y + DP + G++VE+Q + ++G + ++ T + +A+ +HP PL+LS HG HYN Sbjct: 98 GDGACMFRAVAKQVFGTDDRHMEVRQHCI--EYISRNRDHFSQFITEDFEAYIARKKDPSSHGNHVELQAISEIYGRQIEIYEYDTKPVITFHPITVDANVVGEHP-PLMLSYHGNVHYN 214
BLAST of jgi.p|Trimin1|131052 vs. uniprot
Match: A0A7S0NCI9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NCI9_9CRYP) HSP 1 Score: 55.8 bits (133), Expect = 1.570e-6 Identity = 42/138 (30.43%), Postives = 66/138 (47.83%), Query Frame = 1 Query: 7 LHNLGYTLVTEDGDGACLFRAIARYVFNDPSLHHLVRTATATY--NYITMTAPMIAEAGTPEQYYRSRLDPRTWGDNVEVQGAAALFGITVVVFHTTDDVSYTMSQLYNNASQH--PWPLVLSLHGQY-----HYNSL 393 L G + +GDG CLFRA+A + D SLHH R T + ++ A + E+ T E Y + WG N+E+ A+ +++ + H D + +S L +N+ Q L +SLH + HYNS+ Sbjct: 38 LKEFGLRIKIVEGDGNCLFRALADQLHGDESLHHKEREKTVDFIESHKDQFACFLDESETFEDYCSRMRENGEWGGNMEIVANASCNQVSIAI-HQADTPCFIVSPLSDNSKQTCVKRTLHISLHDGHCEAWAHYNSV 174
BLAST of jgi.p|Trimin1|131052 vs. uniprot
Match: G0N276_CAEBE (Deubiquitinating enzyme A n=1 Tax=Caenorhabditis brenneri TaxID=135651 RepID=G0N276_CAEBE) HSP 1 Score: 53.1 bits (126), Expect = 1.600e-5 Identity = 40/131 (30.53%), Postives = 62/131 (47.33%), Query Frame = 1 Query: 19 GYTLVTEDGDGACLFRAIARYVFNDPSLHHLVRTATATYNYITMTAPMIAEAGTPE--QYYRSRLDPRTWGDNVEVQGAAALFGITVVVFHTTDDVSYTMSQLYNNASQ---HPWPLVLSLHGQYHYNSLL 396 G+ + +GDGAC+FRAIA ++ D +H +R NY+T T + Y + + G++VE+Q + +F V + D + NNA Q +P PL LS H HYN++L Sbjct: 145 GFVIKEMEGDGACMFRAIAEQIYGDQEMHGQIRELCM--NYMTTNKDHFEGFITEDYDNYIMRKREENVHGNHVELQAISEMFARPVELAAPIDGAGPS-----NNADQMQQNP-PLRLSYHRNVHYNAIL 267
BLAST of jgi.p|Trimin1|131052 vs. uniprot
Match: A0A1V9Z711_9STRA (Deubiquitinating enzyme A n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z711_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 5.240e-5 Identity = 32/128 (25.00%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 25 TLVTEDGDGACLFRAIARYVFNDPSLHHLVRTATATYNYITMT---APMIAEAGTPEQYYRSRLDPRTWGDNVEVQGAAALFGITVVVFHTTDDVSYTMSQLYNNASQ-HPWPLVLSLHGQYHYNSLL 396 +L++ GDG C+FRAI+ ++ D H +VR + Y T ++ + +Y + WGD+ E+Q L+ + V+ ++ + ++ AS+ H P+ +S +G HY+S++ Sbjct: 155 SLISIQGDGNCMFRAISHQIYGDEKYHSIVRNSCIDYMLEEKTYFEPYVVGDMPAFLRYIAHKRCDGVWGDDPELQALCELYDRPLYVYVYDQELGAKCLRTFHEASKDHAPPMRVSFYGGGHYDSIV 282
BLAST of jgi.p|Trimin1|131052 vs. uniprot
Match: A0A1I8ATC8_9BILA (Deubiquitinating enzyme A n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8ATC8_9BILA) HSP 1 Score: 51.6 bits (122), Expect = 5.590e-5 Identity = 35/130 (26.92%), Postives = 62/130 (47.69%), Query Frame = 1 Query: 19 GYTLVTEDGDGACLFRAIARYVFNDPSLHHLVRTATATYNYITMTAPMIAEAGTPE--QYYRSRLDPRTWGDNVEVQGAAALFG--ITVVVFHTTDDVSYTMSQLYNNASQHPWPLVLSLHGQYHYNSLL 396 G+ +V DGDG C+FRA+A V+ D H VR +Y+ + T + +Y + G+++E+Q ++ I + ++T S+T + Q P+ LS HG+ HYN+++ Sbjct: 156 GFDIVEMDGDGNCMFRAVAHQVYGDQKWHDEVRKLCM--DYLAKNKAEFSSFVTEDINEYIERKRKLDVHGNHLELQVITEIYARPIEIYQYNTKPMKSFTPAHPLETPGQANAPIRLSYHGKTHYNAVV 283
BLAST of jgi.p|Trimin1|131052 vs. uniprot
Match: L1JIR2_GUITC (OTU domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JIR2_GUITC) HSP 1 Score: 51.2 bits (121), Expect = 6.750e-5 Identity = 39/125 (31.20%), Postives = 60/125 (48.00%), Query Frame = 1 Query: 40 DGDGACLFRAIARYVFNDPSLHHLVRTATATY--NYITMTAPMIAEAGTPEQYYRSRLDPRTWGDNVEVQGAAALFGITVVVFHTTDDVSYTMSQLYNNASQHPWPLVLSLH-----GQYHYNSL 393 +GDG CLFRAIA + D SLHH R T Y ++ A + E+ + E Y + WG N+E+ A+ +++ + H D + +S L + + L +SLH HYNS+ Sbjct: 42 EGDGNCLFRAIADQLHGDESLHHREREKTVNYMEDHKDQFACFMDESESFEDYCSRMRENGEWGGNMEIVANASCNQMSIAI-HQADMPCFIVSPLSDKQACVKRTLHISLHDGNCEAWAHYNSV 165
BLAST of jgi.p|Trimin1|131052 vs. uniprot
Match: A0A6C0D7X9_9ZZZZ (OTU domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0D7X9_9ZZZZ) HSP 1 Score: 50.8 bits (120), Expect = 9.270e-5 Identity = 36/112 (32.14%), Postives = 54/112 (48.21%), Query Frame = 1 Query: 25 TLVTEDGDGACLFRAIARYVFNDP--SLHHLVRTATAT----------------------YNYITMTAPMIAEAGTPEQYYRSRLDPRTWGDNVEVQGAAALFGITVVVFHT 288 T++ E+ DG CLFRA+AR+V+ DP +++++ TA + Y TM + A + R R+D +TWG E A LFGITVV++ T Sbjct: 177 TIIEEEPDGNCLFRALARHVYGDPEKTVNYIPTTAHSNRRQVKTRLRAHQMMRKIICDNFLRYTTMQDQSVIRA----ELQRMRMD-KTWGGATEAYVFAHLFGITVVIYDT 283 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|131052 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_18060 ID=mRNA_18060|Name=jgi.p|Trimin1|131052|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=396bp|location=Sequence derived from alignment at Contig_215:182023..182472- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TACACCCTGCACAACTTGGGGTACACGCTAGTGACAGAGGATGGTGATGGback to top protein sequence of jgi.p|Trimin1|131052 >Trimin1|131052|gw1.215.5.1 ID=Trimin1|131052|gw1.215.5.1|Name=jgi.p|Trimin1|131052|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=132bp YTLHNLGYTLVTEDGDGACLFRAIARYVFNDPSLHHLVRTATATYNYITMback to top mRNA from alignment at Contig_215:182023..182472- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_18060 ID=mRNA_18060|Name=jgi.p|Trimin1|131052|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=450bp|location=Sequence derived from alignment at Contig_215:182023..182472- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_215:182023..182472- >mRNA_18060 ID=mRNA_18060|Name=jgi.p|Trimin1|131052|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=396bp|location=Sequence derived from alignment at Contig_215:182023..182472- (Tribonema minus UTEX_B_3156 )back to top |