mRNA_17780 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353734
Unique Name	mRNA_17780
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353734 vs. uniprot
Match: A0A835Z570_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z570_9STRA)

HSP 1 Score: 856 bits (2211), Expect = 6.400e-310
Identity = 535/535 (100.00%), Postives = 535/535 (100.00%), Query Frame = 1

Query:    1 MAATVAAPAGEGEGGIDXXXXXXXAGRAAVALARALLPLYAGQEAVLSAEAAAALAPVLPAACASSHADLLLTRQSRYSGAGAGAGTARVLLGPLARALLGAGAHAPLATALAALSSPWTHTHVSSLARLGLEIFILHALAEADLRALPTGALLPPFSPLDVLGALGGEGHAVADRIARKLGVVGSSGTSQRGAVADASPTGSSAAYLSARCALSTAAADADPAFAALELISPWREDSESVSRLNGALAEELAKVYLWALAAXXXXXXXXXXXXXXXXATASPAADTAIQTSLLSADTQRDNSGHGALMQWARLLAHCLCGVDLGGXXXXXXXXXXXXXXXXXXXXXXXXXCLQRLLQLPAAALGALAPTTGSSGAPHCSLHDFALVAVRAVALGAGDAPERGVAHICAALNSTAXXXXXXXXXXXXXXDTASSSIDGEGGTGGHRSDRDMWTPLLLDYMGFACGAGAARWRRAIGCLPDCGPAGVGAQDAALQHVAATLPATTYLQALPERTTLERCLASMELSVAALAAAAPP 1605
            MAATVAAPAGEGEGGIDXXXXXXXAGRAAVALARALLPLYAGQEAVLSAEAAAALAPVLPAACASSHADLLLTRQSRYSGAGAGAGTARVLLGPLARALLGAGAHAPLATALAALSSPWTHTHVSSLARLGLEIFILHALAEADLRALPTGALLPPFSPLDVLGALGGEGHAVADRIARKLGVVGSSGTSQRGAVADASPTGSSAAYLSARCALSTAAADADPAFAALELISPWREDSESVSRLNGALAEELAKVYLWALAAXXXXXXXXXXXXXXXXATASPAADTAIQTSLLSADTQRDNSGHGALMQWARLLAHCLCGVDLGGXXXXXXXXXXXXXXXXXXXXXXXXXCLQRLLQLPAAALGALAPTTGSSGAPHCSLHDFALVAVRAVALGAGDAPERGVAHICAALNSTAXXXXXXXXXXXXXXDTASSSIDGEGGTGGHRSDRDMWTPLLLDYMGFACGAGAARWRRAIGCLPDCGPAGVGAQDAALQHVAATLPATTYLQALPERTTLERCLASMELSVAALAAAAPP
Sbjct:    1 MAATVAAPAGEGEGGIDXXXXXXXAGRAAVALARALLPLYAGQEAVLSAEAAAALAPVLPAACASSHADLLLTRQSRYSGAGAGAGTARVLLGPLARALLGAGAHAPLATALAALSSPWTHTHVSSLARLGLEIFILHALAEADLRALPTGALLPPFSPLDVLGALGGEGHAVADRIARKLGVVGSSGTSQRGAVADASPTGSSAAYLSARCALSTAAADADPAFAALELISPWREDSESVSRLNGALAEELAKVYLWALAAXXXXXXXXXXXXXXXXATASPAADTAIQTSLLSADTQRDNSGHGALMQWARLLAHCLCGVDLGGXXXXXXXXXXXXXXXXXXXXXXXXXCLQRLLQLPAAALGALAPTTGSSGAPHCSLHDFALVAVRAVALGAGDAPERGVAHICAALNSTAXXXXXXXXXXXXXXDTASSSIDGEGGTGGHRSDRDMWTPLLLDYMGFACGAGAARWRRAIGCLPDCGPAGVGAQDAALQHVAATLPATTYLQALPERTTLERCLASMELSVAALAAAAPP 535

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353734 vs. uniprot

BLAST of jgi.p|Trimin1|353734 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z570_9STRA	6.400e-310	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_180	contig	Contig_180:77608..83612 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353734\|estExt_Genemark1.C_Ctg_1800008
Hectar predicted targeting category	other localisation
TranscriptId	354056
Track	FilteredModels1
ProteinId	353734

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353734	gene_17780	Tribonema minus UTEX_B_3156	gene	Contig_180 77608..83612 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353734	Trimin1\|353734\|estExt_Genemark1.C_Ctg_1800008	Tribonema minus UTEX_B_3156	polypeptide	Contig_180 77608..83574 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17780_1	exon_17780_1	Tribonema minus UTEX_B_3156	exon	Contig_180 77608..77647 +
exon_17780_2	exon_17780_2	Tribonema minus UTEX_B_3156	exon	Contig_180 78021..78207 +
exon_17780_3	exon_17780_3	Tribonema minus UTEX_B_3156	exon	Contig_180 78488..78645 +
exon_17780_4	exon_17780_4	Tribonema minus UTEX_B_3156	exon	Contig_180 78890..78928 +
exon_17780_5	exon_17780_5	Tribonema minus UTEX_B_3156	exon	Contig_180 79460..79598 +
exon_17780_6	exon_17780_6	Tribonema minus UTEX_B_3156	exon	Contig_180 80525..80680 +
exon_17780_7	exon_17780_7	Tribonema minus UTEX_B_3156	exon	Contig_180 81294..81687 +
exon_17780_8	exon_17780_8	Tribonema minus UTEX_B_3156	exon	Contig_180 82493..82805 +
exon_17780_9	exon_17780_9	Tribonema minus UTEX_B_3156	exon	Contig_180 83393..83612 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17780	CDS_17780	Tribonema minus UTEX_B_3156	CDS	Contig_180 77608..77647 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_17780	UTR3_17780	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_180 83575..83612 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_180:77608..83612+
coding sequence from alignment at Contig_180:77608..83612+

spliced messenger RNA

>mRNA_17780 ID=mRNA_17780|Name=jgi.p|Trimin1|353734|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1646bp|location=Sequence derived from alignment at Contig_180:77608..83612+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGCGACGGTGGCGGCGCCTGCGGGCGAGGGCGAAGGGGGCATCGA
CAACGACGACGACGATGACGCTGCGGGTCGCGCCGCCGTCGCGCTGGCGC
GCGCGCTGCTGCCGCTCTACGCAGGCCAGGAGGCAGTGCTTAGCGCGGAG
GCGGCGGCGGCGCTCGCGCCCGTGCTGCCCGCCGCGTGCGCGTCTAGTCA
CGCCGACCTGCTGCTGACGCGGCAGAGCCGTTACAGCGGCGCCGGCGCCG
GCGCCGGCACGGCCAGGGTCCTTCTGGGCCCCCTCGCTAGGGCCCTGCTG
GGCGCCGGCGCGCATGCGCCTCTGGCGACTGCCCTGGCAGCGCTTAGCAG
CCCATGGACACACACACACGTCAGCTCGCTCGCACGTCTGGGGCTGGAGA
TCTTCATCTTGCATGCGCTTGCAGAGGCCGACCTGCGCGCGCTGCCGACG
GGCGCGCTCCTGCCCCCCTTCAGCCCCCTGGACGTGCTGGGCGCGCTCGG
GGGTGAGGGGCACGCGGTCGCGGACCGCATCGCCCGCAAGCTGGGTGTTG
TCGGCAGCAGCGGTACATCTCAAAGGGGCGCCGTCGCCGACGCATCGCCA
ACGGGGTCGTCAGCGGCGTATCTGAGTGCGCGCTGTGCGCTGAGCACTGC
TGCCGCGGACGCAGACCCCGCCTTTGCCGCGCTCGAGCTCATCTCTCCGT
GGCGCGAGGACAGCGAGAGCGTGTCACGCCTCAACGGCGCTCTCGCAGAG
GAGCTGGCCAAGGTGTACCTATGGGCCCTGGCAGCGGCGCCGCCGCCGCC
GCCGCCACTGCCGAGCACTGCTGCTGCCGGCGCCGCCACCGCCTCGCCTG
CAGCTGACACCGCCATACAAACCAGCTTGCTAAGTGCAGACACACAGAGA
GACAACAGCGGACACGGTGCGCTGATGCAGTGGGCGCGCCTGCTTGCGCA
CTGTCTGTGCGGCGTGGATCTCGGCGGCGGCGGCAACGGCGGCGGCGGCA
GCGGCGGCGGCAGCAGCAGCAGCGGCGGCGGCGGCAGCGCGGCTGCTGCG
GCGTGCCTGCAGCGGCTGCTGCAGCTGCCAGCGGCCGCGCTCGGCGCGCT
CGCGCCAACGACGGGCAGCAGCGGCGCGCCGCACTGCTCGCTGCACGACT
TTGCGCTGGTTGCCGTGCGCGCCGTCGCGCTGGGCGCAGGCGACGCTCCA
GAGCGCGGCGTCGCGCACATCTGCGCAGCGCTCAACAGCACCGCCGCCGC
GCGCCAAAATACGACCGGCGGCGGCGGCAGCGGCGGCGACACTGCCAGCA
GCAGCATTGATGGTGAAGGAGGCACCGGAGGCCACAGAAGCGATCGGGAT
ATGTGGACCCCACTGCTGCTGGACTACATGGGCTTCGCCTGTGGCGCCGG
CGCCGCGCGGTGGCGGCGCGCGATAGGCTGCCTGCCGGACTGCGGCCCCG
CAGGCGTAGGTGCGCAGGACGCAGCGCTGCAGCACGTGGCGGCCACACTG
CCGGCGACGACGTACCTGCAGGCGCTGCCCGAGCGCACGACGCTGGAGCG
CTGCCTCGCCAGCATGGAGCTGAGCGTTGCTGCGCTGGCTGCTGCCGCGC
CACCGTAGTATTGTCTATTTCGATAAATACAGGATTCTTCAAAGTT

protein sequence of jgi.p|Trimin1|353734

>Trimin1|353734|estExt_Genemark1.C_Ctg_1800008 ID=Trimin1|353734|estExt_Genemark1.C_Ctg_1800008|Name=jgi.p|Trimin1|353734|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=536bp
MAATVAAPAGEGEGGIDNDDDDDAAGRAAVALARALLPLYAGQEAVLSAE
AAAALAPVLPAACASSHADLLLTRQSRYSGAGAGAGTARVLLGPLARALL
GAGAHAPLATALAALSSPWTHTHVSSLARLGLEIFILHALAEADLRALPT
GALLPPFSPLDVLGALGGEGHAVADRIARKLGVVGSSGTSQRGAVADASP
TGSSAAYLSARCALSTAAADADPAFAALELISPWREDSESVSRLNGALAE
ELAKVYLWALAAAPPPPPPLPSTAAAGAATASPAADTAIQTSLLSADTQR
DNSGHGALMQWARLLAHCLCGVDLGGGGNGGGGSGGGSSSSGGGGSAAAA
ACLQRLLQLPAAALGALAPTTGSSGAPHCSLHDFALVAVRAVALGAGDAP
ERGVAHICAALNSTAAARQNTTGGGGSGGDTASSSIDGEGGTGGHRSDRD
MWTPLLLDYMGFACGAGAARWRRAIGCLPDCGPAGVGAQDAALQHVAATL
PATTYLQALPERTTLERCLASMELSVAALAAAAPP*

mRNA from alignment at Contig_180:77608..83612+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17780 ID=mRNA_17780|Name=jgi.p|Trimin1|353734|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6005bp|location=Sequence derived from alignment at Contig_180:77608..83612+ (Tribonema minus UTEX_B_3156 )
ATGGCGGCGACGGTGGCGGCGCCTGCGGGCGAGGGCGAAGGTGCGTGCAT
GTATGTGATGGACGGCGGTGTACGAACGAGGCGTAGGACGTGGCGCCACC
GAATCCTGCAGCAGCAGTCATGGGCGGTGCATGCGTTGTTAGGGCACTTG
TCTAACACGCTCCGTCGGAGTGACCATCCATTCATGTACCGCTGTCACTT
TTTCATTGGTTGAGATGCACTACTGGAGCGATTTTGGCGTGTTCACAACA
ACATCTCATCGCAACAGCATGTTTTCGCAGCGCTTGTGACTCTAGGACAC
GCGACATTAGCGCATACCCCGCCGCAGCAGCTGCCGCAGCCACAGCGCCT
CACCAGAACTTCAACGGTGCTGGTGCTGTGCAATGAACTTCACGTGCGCG
CTGCGCACTGCAGGGGGCATCGACAACGACGACGACGATGACGCTGCGGG
TCGCGCCGCCGTCGCGCTGGCGCGCGCGCTGCTGCCGCTCTACGCAGGCC
AGGAGGCAGTGCTTAGCGCGGAGGCGGCGGCGGCGCTCGCGCCCGTGCTG
CCCGCCGCGTGCGCGTCTAGTCACGCCGACCTGCTGCTGACGCGGCAGAG
GTGAGCGGAGTGCTGACATGACCTGAGCGCTTGTTCCCGGTGTTGTCAGG
GGTCGCAATGGCGAATGCGCATGGAAGTAAACGTAGCTCAAAGCATAGAG
TACCGTCGGCGGAAGTTGCGTCAGCTCCATCGCCTGAGCACTGCTCCGGT
GGACCTCACGCAGGCATCAGCGCTCAACTCTGGGCCCTCCATCACTTGGG
CACTGCCACATGCTGGCGTCCCGCGCATTCTTCAATAGAAGCACTGACTT
GTAGTTTCACTGTCTGCTGCCCCGCGCGAGCCGTTACAGCGGCGCCGGCG
CCGGCGCCGGCACGGCCAGGGTCCTTCTGGGCCCCCTCGCTAGGGCCCTG
CTGGGCGCCGGCGCGCATGCGCCTCTGGCGACTGCCCTGGCAGCGCTTAG
CAGCCCATGGACACACACACACGTCAGCTCGCTCGCACGTGAGTGCTCTG
TTGAGCGTCTGCCAGTCACCGCCGTGTCTGACAGGTCGAAGCTGCGCCGG
TGCTCAAAAGCGCTGATGCAATGCAAAGTAGCATGGAGAAACCGCACTTG
TGCAGTTTTCTGGTGTTACTGTCAGTAGCTGGCATGCTGTGAAGCACATT
GAGCGTTGATCGCAGCGGTTACGTGGTGTCTGAAGATTTGCGAGGGCGCT
GCCCCCCCCCCCCCCCCCCCTTGCCACCAGAGGTCTGGGGCTGGAGATCT
TCATCTTGCATGCGCTTGCAGGTGCTGTACGTGCTGATCGTCATTCATGG
GGCTGATGCTGAGCGCTGTGTGTCGCGCGGCGCCAGTGCACAAGCGCCCA
CGCTAGCCAAAATCAAACTGAATGTCCGTGCTGAGTACATGCAGATCCGT
TGTGCGTGCTCTGCAGCATCATCCCCGACTCTCACGGCGCGCCGCCTCTC
ATTGTTGTTGCTGAGCAGTGCTGCGCAGAGGCCAACCTGCGCGCGCGAAA
AGTACATGATTCAAACTTGTCATCCACACCAAGAACCTCAAAGTACATGC
ATGCTGAGCCCTTGCGCAGGCCGTTAAGCATCATCCCCGTCTCTCACGGC
GCGCCGCCTCTCATTGTTGTTGCTGAGCAGTGCTGCGCAGAGGCCAACCT
GCGCGCGCGAAGAGTACACGATTCAAACTTGTCATCCACACCAAGAACCT
CAAAGTACATACATGCTGAGCCCTTGCGCATGCCGTTAAGCATCATCCCC
ATCTCTCACGGCGCGACGCCTCTCGTTGTTGCTGCTGAGCGGTGCTGCAC
AGAGGCCGACCTGCGCGCGCTGCCGACGGGCGCGCTCCTGCCCCCCTTCA
GCCCCCTGGACGTGCTGGGCGCGCTCGGGGGTGAGGGGCACGCGGTCGCG
GACCGCATCGCCCGCAAGCTGGGTGTTGTCGGCAGCAGCGGGTGAGTCTG
AAATTGAGTCGGAGTCATCAGCACTCAGTGAAGGGGGGGGGGGGGGCGGT
GCTGAACGATGGGCATATACGGCGACCACGCATGTTCGTCGGTATTTAGC
AGCATGTTCTTCTATGTACCTAGATGGGTATGTACTTGGACGTGCTGGGC
GCGCTTGGGGGGGGAGGGGCGTGCGATAGCAGGCCGCATCGCGCAAGTTG
GGCGTTGTCGGCAGCAGCGGGTGAGTCTGAGTCTGAGTCATCAGCGGTCA
GCGCGTGAGGGGGAGGGGGGAGACCCCCCGGATGATGGGCATGTACGAAG
CCGACCACGCATGTAGGTAGGTATGTATCTAAAAGCGTGTACGGGCGCGC
TTGTCAACCGGGCTGAAAGCGCACTTTGGCAGGACATTGCAATGAAGAAG
AAGCCTGACATGTGCATGCCAGACCGCGCACGATTAGATGCGGCTGGCAC
AAGGGCAGATGCCCGCTGCAGCGCACAGGCCCAGGCTTTTGTGACGGAGG
CTTGTGTGAGCAGCACTGCTCAACCAGGTAAATGCGTGCTGCAGGAGGTA
TCTGAGGCAGATTGCAGTGCATCCGTGCACGGGTGCATGAATGCAAACAA
CTCGACACCATGTGCAAGCCAGCGCTGCGTCGATGCCATTTGAGCAAACA
GCACTGTTCGTAAGCTTTTCTTGATCTGCTGTGCTCGTGAGGTCATCGCA
GCAGACCTGCCGAATCACAACAGTGCTCATCTACAACGCAAGCACTGTGC
GTCTCATGCGATCCTATCAGCGGCTGCCTGCGCGTGCAGTTGCCCGCCGT
GCAACTCACAAACGTTCCTTTGAACCCTGCCCCTAACCCCAAATCTGTGC
GTTACCCTCACCAAAACTCTTCAGAGCCGCCAACACCCATGTACTTATGC
TCTCTTCCGTTTTTCAGTACATCTCAAAGGGGCGCCGTCGCCGACGCATC
GCCAACGGGGTCGTCAGCGGCGTATCTGAGTGCGCGCTGTGCGCTGAGCA
CTGCTGCCGCGGACGCAGACCCCGCCTTTGCCGCGCTCGAGCTCATCTCT
CCGTGGCGCGAGGACAGCGAGAGGTGCGCTGGCGCAGTGAGCATTTTGTC
AATGCGGTACGCAGGAATGCCGTCCTTCTTGCAGATGCCGCTTGCGAGTA
CACTACATCCTGCCACAACAGGCCCAGGTCGCATTCAAGCGGACTGGCGA
TGTAGATATACCGCTGATTGTTGCCGCGCCAGCGAGGACAACGAGAGGCA
GCACGCACCTGAAGTGTTGCTGTCTCTTAACTCTGCTGCCCGCAATCCGT
GCACGTCTGACGCTTATGCCATACCACCTCAACACTGTAACTGTGGTTAT
GCAATACCACCCAAGCACCATGGTAGTGGGTGTGTAGGCAGGTGTTTGTG
CAATGTGTATGCACATACTTATCGTCGCACGCAGCACCATGCAACCGCGC
CAAGCAGGTCGTATGAATGGCCAAAGTGCACAAGGACGCACCCACAGACC
GCCCAGTTGATTATCGTCCCAGCGCGGCATGCACGCGCCGCCATGCAGCA
GCCTTCACGCACAGCAACACTCTAGCACTAGACTCCCCCGGTGCACCAAA
ACGGGCGCCGTCTGGTCTGTGCATGGCGCTGAGCATCGCTGCTGAGCATC
TCTGTTCTGACCCTACGTCCCTGTCATCATCTGCAGCGTGTCACGCCTCA
ACGGCGCTCTCGCAGAGGAGCTGGCCAAGGTGTACCTATGGGCCCTGGCA
GCGGCGCCGCCGCCGCCGCCGCCACTGCCGAGCACTGCTGCTGCCGGCGC
CGCCACCGCCTCGCCTGCAGCTGACACCGCCATACAAACCAGCTTGCTAA
GTGCAGACACACAGAGAGACAACAGCGGACACGGTGCGCTGATGCAGTGG
GCGCGCCTGCTTGCGCACTGTCTGTGCGGCGTGGATCTCGGCGGCGGCGG
CAACGGCGGCGGCGGCAGCGGCGGCGGCAGCAGCAGCAGCGGCGGCGGCG
GCAGCGCGGCTGCTGCGGCGTGCCTGCAGCGGCTGCTGCAGCTGCCAGCG
GCCGCGCTCGGCGCGCTCGCGCCAACGACGGTGGCAACGACGGGTACTGA
TGGGATGGAGGCAAGTTTGCGTTTAAAGCGGTACACAGCGCATCAACACC
ATTATGTAGACACAGACAATATGGTTGTGACTCTGACAACTGTGAGCTAG
CGGTGGCTGCAGCTGGCCGCACGATGTTCATGTCATGATTGCTCGGTCTG
GAGCTTCCGCATTTGCACACGAGCTTTCGGAAACCTTTGCGTGTTGAGCA
TGGCTCCCCGCAGAACTCGGAAAACGCTGCAGATTACGAGTGAAATTGAT
ATCTCGCTGCAGTGAATGAGGCTTGTACGGAGGTAATGGGTCTATCCAGC
ACCAGACTTTAAGTTAAGCTCTATCCTCAACTCTTGTGCGCGTGCGCACA
GGCGCATGTGCTCTCCATTTGTGTCGCCTGTGAAGTGCTAGCATTGGGGT
TAGCGTCAGGGGTAGGATCAGGGTTAGGTTTAGGGCTAGGGCTAGCGTTA
GGGTTAGGGTTAGGGTAAGCCTCCACAAGCCAAACGCGCACGCGTGGCCA
ACTGGACAATCTGCCTGCGCCTTGCCGAGGTGTTGCAGTTCAAATCTGCG
CGTTGCCAGTGCCGAGTCACTGGTGCTGCTGACAAGCGCACTCGCTGGCT
GGAGTCACTCTTCGTGACACAATGAATGGCCCGCTCTTGATGAAAGTGCA
GTGATATAATTCCAATGCACTTCATTGTCATCTGCTTTGCAGCAAATTCA
ATTAGATCTGTGTTGCTCACATACACACGCACACGTGCTAATGAGGCCAT
TCAACACCCCCGCCCCCTCCCTCTATTTAATCCAGGGCAGCAGCGGCGCG
CCGCACTGCTCGCTGCACGACTTTGCGCTGGTTGCCGTGCGCGCCGTCGC
GCTGGGCGCAGGCGACGCTCCAGAGCGCGGCGTCGCGCACATCTGCGCAG
CGCTCAACAGCACCGCCGCCGCGCGCCAAAATACGACCGGCGGCGGCGGC
AGCGGCGGCGACACTGCCAGCAGCAGCATTGATGGTGAAGGAGGCACCGG
AGGCCACAGAAGCGATCGGGATATGTGGACCCCACTGCTGCTGGACTACA
TGGGCTTCGCCTGTGGCGCCGGCGCCGCGCGGTGGCGGCGCGCGATAGGT
GGGCTGACGCGACGCTAACCCACCAGCTACTACCGTAGTAGCAGTCCTCT
GTTGTAGCCATGTGCGTACTCTGGCTGGCCAGTGCCAAGCTTAACCTGAT
GGACTGCTTTTCTCAGACCCCCTGCAATCATTGCTTCGCGCTTCTGGGCC
TGCTTCCCCTTCAAAGTGTCCCGGGGGTACACAGTGTGTGTGTGCCGCCA
GTGGCATGGCCGTCATGCACTATAATTGCTGTTAGCAGCAGGGCTGCTAG
AAAATGTGTGGCTCTGCAGCCGTCAAGCTGATGTTGGTACCAGTGATGGC
AGCGCTCATCCGTGCTGTCACATCCAGTGGTCGCCTGCCTGCACCTGCAT
GCGCATCGCGAGCCCACCGGTAAATCCCCCTTGTTGCGACTTTGCGTAAA
TGTCTCACGTATGATCATGATGCAATCCCGCCGTGTTCAGCACACCCATC
AATTTTCACAATGCCCTGTTTGCATTATACTTCGGAACCACCTCCAACAC
AAGTATTTAGAGGCTTTGTGCGACACAAATGCTGTAAATACATTTCCAAG
TCATCGCACTCGTGCTGCTTGAGCAATGCGCGCAGGCTGCCTGCCGGACT
GCGGCCCCGCAGGCGTAGGTGCGCAGGACGCAGCGCTGCAGCACGTGGCG
GCCACACTGCCGGCGACGACGTACCTGCAGGCGCTGCCCGAGCGCACGAC
GCTGGAGCGCTGCCTCGCCAGCATGGAGCTGAGCGTTGCTGCGCTGGCTG
CTGCCGCGCCACCGTAGTATTGTCTATTTCGATAAATACAGGATTCTTCA
AAGTT

Coding sequence (CDS) from alignment at Contig_180:77608..83612+

>mRNA_17780 ID=mRNA_17780|Name=jgi.p|Trimin1|353734|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1608bp|location=Sequence derived from alignment at Contig_180:77608..83612+ (Tribonema minus UTEX_B_3156 )
ATGGCGGCGACGGTGGCGGCGCCTGCGGGCGAGGGCGAAGGGGGCATCGA
CAACGACGACGACGATGACGCTGCGGGTCGCGCCGCCGTCGCGCTGGCGC
GCGCGCTGCTGCCGCTCTACGCAGGCCAGGAGGCAGTGCTTAGCGCGGAG
GCGGCGGCGGCGCTCGCGCCCGTGCTGCCCGCCGCGTGCGCGTCTAGTCA
CGCCGACCTGCTGCTGACGCGGCAGAGCCGTTACAGCGGCGCCGGCGCCG
GCGCCGGCACGGCCAGGGTCCTTCTGGGCCCCCTCGCTAGGGCCCTGCTG
GGCGCCGGCGCGCATGCGCCTCTGGCGACTGCCCTGGCAGCGCTTAGCAG
CCCATGGACACACACACACGTCAGCTCGCTCGCACGTCTGGGGCTGGAGA
TCTTCATCTTGCATGCGCTTGCAGAGGCCGACCTGCGCGCGCTGCCGACG
GGCGCGCTCCTGCCCCCCTTCAGCCCCCTGGACGTGCTGGGCGCGCTCGG
GGGTGAGGGGCACGCGGTCGCGGACCGCATCGCCCGCAAGCTGGGTGTTG
TCGGCAGCAGCGGTACATCTCAAAGGGGCGCCGTCGCCGACGCATCGCCA
ACGGGGTCGTCAGCGGCGTATCTGAGTGCGCGCTGTGCGCTGAGCACTGC
TGCCGCGGACGCAGACCCCGCCTTTGCCGCGCTCGAGCTCATCTCTCCGT
GGCGCGAGGACAGCGAGAGCGTGTCACGCCTCAACGGCGCTCTCGCAGAG
GAGCTGGCCAAGGTGTACCTATGGGCCCTGGCAGCGGCGCCGCCGCCGCC
GCCGCCACTGCCGAGCACTGCTGCTGCCGGCGCCGCCACCGCCTCGCCTG
CAGCTGACACCGCCATACAAACCAGCTTGCTAAGTGCAGACACACAGAGA
GACAACAGCGGACACGGTGCGCTGATGCAGTGGGCGCGCCTGCTTGCGCA
CTGTCTGTGCGGCGTGGATCTCGGCGGCGGCGGCAACGGCGGCGGCGGCA
GCGGCGGCGGCAGCAGCAGCAGCGGCGGCGGCGGCAGCGCGGCTGCTGCG
GCGTGCCTGCAGCGGCTGCTGCAGCTGCCAGCGGCCGCGCTCGGCGCGCT
CGCGCCAACGACGGGCAGCAGCGGCGCGCCGCACTGCTCGCTGCACGACT
TTGCGCTGGTTGCCGTGCGCGCCGTCGCGCTGGGCGCAGGCGACGCTCCA
GAGCGCGGCGTCGCGCACATCTGCGCAGCGCTCAACAGCACCGCCGCCGC
GCGCCAAAATACGACCGGCGGCGGCGGCAGCGGCGGCGACACTGCCAGCA
GCAGCATTGATGGTGAAGGAGGCACCGGAGGCCACAGAAGCGATCGGGAT
ATGTGGACCCCACTGCTGCTGGACTACATGGGCTTCGCCTGTGGCGCCGG
CGCCGCGCGGTGGCGGCGCGCGATAGGCTGCCTGCCGGACTGCGGCCCCG
CAGGCGTAGGTGCGCAGGACGCAGCGCTGCAGCACGTGGCGGCCACACTG
CCGGCGACGACGTACCTGCAGGCGCTGCCCGAGCGCACGACGCTGGAGCG
CTGCCTCGCCAGCATGGAGCTGAGCGTTGCTGCGCTGGCTGCTGCCGCGC
CACCGTAG