mRNA_17718 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354314
Unique NamemRNA_17718
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835Z1T5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1T5_9STRA)

HSP 1 Score: 867 bits (2241), Expect = 0.000e+0
Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 1
Query:    1 MACVLHADDCTAAVASREDKLQSLFRTQATAAAQSPERLELALAADLTEEMLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECEERVAIMASIGELHM 1266
            MACVLHADDCTAAVASREDKLQSLFRTQATAAAQSPERLELALAADLTEEMLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECEERVAIMASIGELHM
Sbjct:    1 MACVLHADDCTAAVASREDKLQSLFRTQATAAAQSPERLELALAADLTEEMLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECEERVAIMASIGELHM 422          
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835Z0H9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0H9_9STRA)

HSP 1 Score: 328 bits (842), Expect = 6.140e-106
Identity = 177/328 (53.96%), Postives = 210/328 (64.02%), Query Frame = 1
Query:  265 LVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVE--DAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGED-AADIIRE-TMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECEERVA 1236
            L G   T   A L+ VYQ L  ++  +    W    V LAKHGDTGLC AWL+PQ       D +  WPEW C VLC  AAS+G L +LQFLLDRTRGQALFG Y     +D+ E ++    AA+++R  T G       + H  SLL+ AA+GG++R+++WL+QQGH+VTP   EV                    D + LY  TLVGG I PAQMEWLR RG GDWS AG++EALLKRLAS H DAT ALA+WLLA+GAQ P S+RELTRRGAP  HV WALQHGCG GE  WT EHC EAER+  GLR ALH LGCPC C+ R A
Sbjct:   87 LDGDDRTPAAACLERVYQFLRGEKEIIEYETWREAAVELAKHGDTGLCLAWLSPQFDAGPSWDRSKEWPEWLCGVLCTAAASSGPLETLQFLLDRTRGQALFGCYTQPRLSDMEEHELAHTYAAEVMRAGTKGAF----PEAHVLSLLEGAAKGGNLRVLRWLMQQGHAVTPFALEVXXXXXXXXXXXXXXXXXXXXDVDALYAATLVGGAIAPAQMEWLRARGAGDWSPAGLSEALLKRLASGHPDATPALAEWLLARGAQCPRSVRELTRRGAPAVHVAWALQHGCGWGEAAWTTEHCNEAERAHAGLRYALHRLGCPCACQHRDA 410          
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A836CKN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN3_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.980e-57
Identity = 145/398 (36.43%), Postives = 202/398 (50.75%), Query Frame = 1
Query:   58 KLQSLFRTQATAAAQSPERLELALAADLTEEMLQR--FCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWL-LQQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGA----PMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRG---LRRALHELGCPCEC 1221
            K  S+  T+ +AAA S  RL LAL +    + L    F A     +ALG  G  +V +R+AQ  +++    L+GAA TCN+A L  ++  +L+Q+ DV   I    GV+LA+ GD G C +WLA Q          WP  F + +C  AA   ++ +LQFLL   RG ALFG    L  +D+    +  DA   +        D    EH  +++D AA   +  ++QWL  Q     T IT + AA N  L  +K L  QG A D N +    LV   + P  + W+R  GGGDWS  GMT+ L   L       T  LA+WL  +GA WP+++ +L  R      P+  ++WA+QHGC  G   WT   CE  E S      ++RALH+LGCPC C
Sbjct:   94 KATSVHLTKFSAAAVSQSRLNLALLSTKFTDALPTLSFPARYSLCLALGELGSLEVVQRMAQAGLNVGAEVLIGAADTCNIADLHSLWVGVLSQQ-DVDLEICIEIGVSLARFGDDGSCLSWLAAQLRR----PSAWPAHFINEVCNLAAMWANIPTLQFLL--ARGPALFGTLGTLFLSDI-RSTLPNDALVFV--------DLGGTEHVLTVVDAAAMAANPTVLQWLHSQHAAEFTSITMQEAASNAVLPSLKWLHQQGCAYDINQILQLVLVSVYVTPPAVAWVRSFGGGDWSPQGMTDMLATALLRS----TPGLARWLRVEGAPWPQNLAQLVNRAGNYVKPLT-ILWAVQHGCPFGR--WTTRVCERLESSSASGGAVKRALHDLGCPCAC 468          
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835YMG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG8_9STRA)

HSP 1 Score: 158 bits (400), Expect = 4.520e-40
Identity = 124/382 (32.46%), Postives = 181/382 (47.38%), Query Frame = 1
Query:  103 SPERLELALAADLTEEMLQ--RFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLL-QQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTR---RGAPMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRG---LRRALHELGCPCEC 1221
            +P RL LAL +     +L   R  A      ALG  G  +   R+ Q  +DI E  L GAA +C+ ++LQ ++   L  + ++     +  G+ LA  GD G   +WLAPQ    +     W   + ++L   AA+ G  ++LQFLL   RGQ LFG    L A  + + +      D   + +    D +  +   +L D AA   D  +++WL  ++  + T IT +VAA N  L  +  L AQG   D   +    L      P  + W+R  G GDWS     + +   LAS   + T ALA+ L A+GA WPE + EL            ++WA+Q GC  G   WT E CE  +    G   ++RALH+LGCPC C
Sbjct:   91 APSRLNLALVSGEFTYVLSSLRLTARCELSSALGEAGSVEAVERMQQAGLDIEEEVLNGAAKSCDSSSLQSIWAGPLGSQ-ELDAPRCYEIGIRLAIFGDDGSALSWLAPQLPKAQ----AWSPCYINILSNYAAAWGRTSTLQFLL--ARGQELFGA---LGAVSLADHENTWPLTDKDMDGVWTYRDEEGAKQVMTLTDAAAAADDTAVLRWLQSRRALAFTGITMQVAAANARLPSLTWLRAQGCPHDMAQVCRQLLGSRRATPPAVAWVRRYGTGDWSP----QCMRGMLASAMLNGTPALARRLRAEGAPWPEDLAELVATEIEDVRPQTILWAVQQGCPFGR--WTTEVCELLDDDREGGGAVKRALHDLGCPCAC 456          
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835Z2J0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J0_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.110e-39
Identity = 132/413 (31.96%), Postives = 177/413 (42.86%), Query Frame = 1
Query:   79 TQATAAAQSPERLELALAADLTEEMLQRFCAEA-PFHIALGAGGDRKVWRRLAQLS-VDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGV-----ALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQ-----QGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTT--LVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADA------TYALAQWLLAQGAQWPESIRELTRRGAPMH------------HVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCEC 1221
            TQ   AA S  RL+ AL +D  E   +R    +     A GA GD  + RR   L  V      L GAA  CN   L  ++  + +       S+ W  G+      LA+ GD G    W++ Q          WP  +   LC  AA+NGHL +LQFLL    G ALFG   PL            D      E M             ++L+ A  GGD+  VQWLL          ++    E+AAH GHL L++ L  +    DA  + +T   + G    PA ++W+RG G GDWS  GMT  L   L     D        + +A++LL +GAQWPE  R+      P               V+WAL+HGC  G+  W  + C E E      +R LH   CPC+C
Sbjct:  148 TQPAQAAHSHARLDAALRSDDFEAAARRVGRRSGSIARAAGATGDVALVRRCMALGGVQDASWTLTGAARLCNAGLLSALHALVASPENRKVGSLKWDAGMRRWGQVLAECGDGGDALTWVSQQRP-----PRVWPRCYTLSLCQRAAANGHLRTLQFLLGP--GLALFG---PLDEQLAYRAGSNSDNPGRAMEEM-------------TMLEAAVSGGDIATVQWLLDLRIEAYDSELSERVMEIAAHRGHLPLLRWLRGKQCPFDAGTICSTVAGVPGSRCTPAVLQWMRGCGWGDWSAGGMTAMLAAALMPQRTDRWLCEDPNFTVAEYLLREGAQWPEPPRDGALLRGPWDLVGMLSVCKSDKAVLWALRHGCPWGK--WGTDECNEMESRIATAKRVLHSFECPCQC 535          
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835YNS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS1_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.550e-38
Identity = 131/406 (32.27%), Postives = 180/406 (44.33%), Query Frame = 1
Query:   40 VASREDKLQSLFRTQATAAAQSPERLELALAADLTEEMLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNV-ATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSV--TPITFEVAAHNGHLHLVKHLAAQGYACDANVL----YNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPMHHVVWAL----QHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECE 1224
            V +R   +  +  T A A A++P RLE+ LA  +    L           A GA G  +V RR+ QL      ++  G A+ C    TLQ     + +  CD +                      WL+         A  WP W+C+ LC TAA NG LA+L+FL+   RGQALFG   P       +  V + A    R   G+  + +   +  +L+D AA GG+V +++WL Q+ H++  TP T   AA  GHL  +K L A G   D   L    +       G+ P+QMEWLR  GG  WS+   T ALL  L         A  QWL  +GA+WPE    + +       V  AL    + GC  G   WT  HC    R    + + LH  GCPCEC+
Sbjct:   75 VTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVR---LPARGGSFDVEEAAGASGSTEVIRRMRQLG-----MSAAGVAAECGEHMTLQTWIDLVPHILCDAY------------DGAQQEAALIWLSQH-------ARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIP-------DPSVVDTAGPEWRHAPGYSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQE-HALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGG-SWSRQTATHALLHLLRDFR---NTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGR--WTPTHCRIVSRGRYSIIKPLHAAGCPCECD 439          
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835Z7G5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7G5_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.910e-33
Identity = 96/247 (38.87%), Postives = 133/247 (53.85%), Query Frame = 1
Query:  508 GHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSV--TPITFEVAAHNGH-LHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPM---HHVVWALQHGCGSGEGGWTAEHC---EEAERSCRGLRRALHELGCPCEC 1221
            G + +LQFLL+   GQALFG       +DV ++D+   A  + R       D D  +H ++L D A    D  ++QWL Q  ++V  T  T  VAA  G  L  +K L AQG   D + +    L     PP  M W+R  GGGDWS  GMT+ L K L ++    T ALA+WL A+GAQWP+ + E+    A +    +++WALQ GC  G   WT + C   E++  S   ++RALH+LGCPC C
Sbjct:    3 GQITTLQFLLEG--GQALFGSLGTFCLSDV-KDDMQYKACCLFR-------DVDGTQHARTLSDTATMANDAAVLQWL-QSRNAVQFTSKTMLVAADGGAVLANLKWLRAQGCPHDIDKICQIVLDTPWTPPPVMAWVRSCGGGDWSPQGMTDMLAKALLNN----TPALARWLRAEGAQWPKDLAEVVTSKADILISSNILWALQQGCPFGR--WTTQVCGLLEKSHDSGGAVKRALHDLGCPCAC 232          
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835YZ94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ94_9STRA)

HSP 1 Score: 140 bits (352), Expect = 4.250e-33
Identity = 116/410 (28.29%), Postives = 176/410 (42.93%), Query Frame = 1
Query:   40 VASREDKLQSLFRTQATAAAQSPERLELALAADLTEEMLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINE----LALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHG----DTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAP-LHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLL-QQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGG--GIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPMHH---VVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECE 1224
            V +R+     +  T  +A  ++P RLE+ALA       L + C       A G  G  +V  RL QL + +++      L+GA        L  +    L     V    W   G+ + +      +      WL+ Q          WP W+C+ LC TAA NG LASL+FL+ +  GQ LFG     L   D    +  +   D+  + +G +       H+ ++++ AA GG ++++QWL  +Q   VTP T  V                G   D   +   +   G     P+QMEWLR  GG  WS   +T AL   L       +  +  WL ++GA WP+        GA   +   V+WA Q GC  G+  WT+E C+        ++ A+H+  CPC+CE
Sbjct:  106 VTARQQGAAWVCVTSGSAVVETPARLEMALARGADVPALVKSC---DVQRAAGTSGSMEVIHRLRQLGMVVSDGVVLQVLIGATCARRTGVLYRLPALALESGEQVDHQTWTYAGICVLRSAYDEEEQKAVLIWLSQQ-------VRPWPVWYCTCLCHTAAENGRLASLKFLMHKDCGQVLFGSLVQDLSVIDFSSPERADAPTDLCFQFVGGV------HHHVTVMNRAAAGGHIKVMQWLHHEQPLPVTPQTMSVXXXXXXXXXXXXXXQVGCPYDIAYICKLSFQEGVARATPSQMEWLRSVGG-SWSYEMVTAALYD-LVGYCTSTSKEMIGWLRSEGAPWPQLSELAVAVGAEDLNAAAVLWAAQQGCPWGD--WTSECCDAMSHGRYSIKTAIHDARCPCQCE 495          
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A836CDJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ7_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.680e-30
Identity = 121/413 (29.30%), Postives = 174/413 (42.13%), Query Frame = 1
Query:   37 AVASREDKLQSLFRTQATAAAQSPERLELALAADLTEEMLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHG----DTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVE--EDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSVT--PITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIP--PAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAP-------MHHVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECE 1224
            A  +R+  +  +  T  +AA ++PER E+ALA  ++   L      +    A GA G  +V R L +L V  ++  L  AA       L         +   V  S W                      WL+ Q   +       P W+CS LC TAA NG LA+L+FL+    GQALFG   P       E  E +   A D I+    + G         +L++ AA  G V ++QWL Q+ H++    +T                   G   D N L + +L    +   P QMEWLRG GG  WS+  +TEAL   +    A+    L  WL ++GA+WP   + L    A        +  V+WA Q GC  G+  WT   C +  R    ++ A H  GCPC+C+
Sbjct:    2 AATARQQGVPWVCVTSGSAAVETPERQEMALACGISVPALTN---SSDAQCAAGASGSMEVIRHLHRLGVPTSDAVLFSAARARRTGILYRFPVLARERNVQVKMSTWMAVYERFLSDSYNDEQQRAALIWLSQQVRPL-------PVWYCSSLCVTAAENGQLAALKFLMHDDHGQALFGPLIPDSLVIDFESPEWINAPACDYIQTNGTFSGRA-------TLMEKAAASGHVEVLQWLHQE-HALPFRSVTXXXXXXXXXXXXXXXXYEAGCPHDINELCDVSLDNPMMKRAPPQMEWLRGIGG-SWSREQVTEALSSLVGYRGAEK---LISWLRSEGAEWPSLAQTLQGGYAADDCDEGEVGAVLWAAQQGCPWGD--WTPRCCAQVSRGRYSIKEAPHAAGCPCQCD 390          
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A836CAB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAB5_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.190e-29
Identity = 99/334 (29.64%), Postives = 153/334 (45.81%), Query Frame = 1
Query:  265 LVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYA--PLHATDVVEE-----DVGEDAADIIRETMGWI----GDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRE-----LTRRG--AP--MHHVVWALQHGCGSGEGGWTAEHCE--EAERSCRGLRRALHE 1200
            L+GAA  C+++ LQ +Y   +     +    W    +ALA  GD      WL+ Q          WP +  + +C +AA NGHLA+LQ+LL   RG A+FG +   PL   D  +      D G DA D +     W     G   +++    L+D AA  G + ++ WL ++G   +  T   AA +GH+  ++ L  Q    +   +Y   +      PA M+W+R  GGGDW+  G+   +L+     H     A+A+WL AQGA+WP+++       L R    +P  +  + WA   GC  G   W    C    +E      ++ LHE
Sbjct:  218 LIGAARHCDLSLLQSIYDDEILDIGRITPREWCRVALALAASGDDDFALTWLSQQRR----CRARWPRYLLAAMCYSAAFNGHLATLQYLLHPRRGIAVFGPFESPPLEVGDDSDSHDSDSDSGGDALDELLAEARWPVNFNGAGFNRQFTLKLMDKAAGSGSIEVLDWLTEEGFEFSHNTMPYAARHGHVAALQWLRRQDCPHNMEDVYEAAVTSHFATPALMQWIRTYGGGDWTPYGLN-GMLRFAMIYHKHP--AVAEWLRAQGAEWPDTLFHMFYGYLNRNDIFSPPRVEMIAWAASKGCPWGT--WAGYECHTLSSESHSPNAQQLLHE 542          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A835Z1T5_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0H9_9STRA6.140e-10653.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CKN3_9STRA1.980e-5736.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMG8_9STRA4.520e-4032.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2J0_9STRA1.110e-3931.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNS1_9STRA1.550e-3832.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7G5_9STRA1.910e-3338.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ94_9STRA4.250e-3328.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDJ7_9STRA2.680e-3029.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CAB5_9STRA1.190e-2929.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_230contigContig_230:74908..76612 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354314|estExt_Genemark1.C_Ctg_2300013
Hectar predicted targeting categoryother localisation
TranscriptId354636
TrackFilteredModels1
ProteinId354314
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354314gene_17718Tribonema minus UTEX_B_3156 geneContig_230 74908..76612 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17718_1exon_17718_1Tribonema minus UTEX_B_3156 exonContig_230 74908..75738 +
exon_17718_2exon_17718_2Tribonema minus UTEX_B_3156 exonContig_230 76159..76612 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17718CDS_17718Tribonema minus UTEX_B_3156 CDSContig_230 74908..75738 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_17718UTR3_17718Tribonema minus UTEX_B_3156 three_prime_UTRContig_230 76597..76612 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354314Trimin1|354314|estExt_Genemark1.C_Ctg_2300013Tribonema minus UTEX_B_3156 polypeptideContig_230 74908..76596 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17718 ID=mRNA_17718|Name=jgi.p|Trimin1|354314|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1285bp|location=Sequence derived from alignment at Contig_230:74908..76612+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTGTGTGCTGCACGCTGATGACTGCACGGCAGCGGTGGCCTCTCG
CGAAGACAAGCTTCAGTCGCTGTTCAGAACGCAGGCCACTGCAGCAGCGC
AATCGCCGGAGCGGCTGGAGCTTGCGCTTGCTGCGGATCTTACCGAGGAG
ATGCTGCAGCGCTTTTGCGCGGAAGCGCCCTTTCACATAGCCTTAGGGGC
GGGGGGCGACCGCAAGGTGTGGCGGCGTCTTGCGCAGCTCAGCGTGGACA
TTAATGAACTGGCGCTGGTTGGCGCAGCCTCCACCTGCAACGTCGCCACT
CTCCAGGTGGTCTACCAGCACCTGTTGAACCAGCGCTGCGACGTTCACTG
CTCCATCTGGTGGATCACTGGTGTTGCACTTGCCAAGCACGGGGATACTG
GCCTGTGCTTTGCGTGGCTCGCTCCGCAAAACTCGAACGTTGAGGATGCA
GCCGGCACGTGGCCTGAGTGGTTCTGTAGTGTGCTGTGCGGCACTGCCGC
CAGCAACGGCCATCTAGCATCGCTGCAGTTTTTGCTGGACCGTACGCGTG
GACAGGCTCTGTTTGGGCGCTACGCGCCGTTGCATGCAACCGACGTTGTG
GAAGAAGATGTTGGTGAGGATGCTGCAGACATCATCCGCGAGACAATGGG
CTGGATCGGCGATACCGACTCTCAAGAGCACTACAAGTCGTTGTTGGACT
GCGCCGCGGAGGGAGGTGACGTGCGCATGGTGCAGTGGCTGTTGCAGCAA
GGCCACAGCGTTACGCCCATTACCTTTGAGGTTGCCGCACACAACGGTCA
TCTGCATCTCGTCAAGCACCTGGCTGCACAGGGCTACGCGTGCGACGCCA
ACGTGCTGTACAACACCACGCTGGTGGGGGGGGGCATCCCCCCCGCTCAG
ATGGAGTGGCTCCGCGGCCGCGGCGGCGGCGACTGGAGCCAGGCGGGCAT
GACGGAGGCGCTGTTGAAGCGCCTCGCCAGCGATCACGCCGACGCCACGT
ATGCGCTGGCGCAGTGGCTGCTGGCGCAAGGGGCTCAGTGGCCGGAGAGC
ATCCGCGAGTTGACGCGCAGGGGGGCGCCCATGCACCACGTTGTGTGGGC
GCTGCAGCACGGGTGCGGCTCGGGGGAGGGGGGCTGGACGGCTGAGCACT
GCGAGGAAGCGGAGCGCAGCTGCAGAGGCCTCAGGCGGGCTCTGCATGAG
CTGGGGTGCCCTTGCGAGTGCGAGGAGCGCGTCGCCATCATGGCGAGCAT
CGGCGAGCTGCATATGTGAATGAGATGACTTGGAG
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protein sequence of jgi.p|Trimin1|354314

>Trimin1|354314|estExt_Genemark1.C_Ctg_2300013 ID=Trimin1|354314|estExt_Genemark1.C_Ctg_2300013|Name=jgi.p|Trimin1|354314|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=423bp
MACVLHADDCTAAVASREDKLQSLFRTQATAAAQSPERLELALAADLTEE
MLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVAT
LQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDA
AGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVV
EEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQ
GHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQ
MEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPES
IRELTRRGAPMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHE
LGCPCECEERVAIMASIGELHM*
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mRNA from alignment at Contig_230:74908..76612+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17718 ID=mRNA_17718|Name=jgi.p|Trimin1|354314|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1705bp|location=Sequence derived from alignment at Contig_230:74908..76612+ (Tribonema minus UTEX_B_3156 )
ATGGCGTGTGTGCTGCACGCTGATGACTGCACGGCAGCGGTGGCCTCTCG CGAAGACAAGCTTCAGTCGCTGTTCAGAACGCAGGCCACTGCAGCAGCGC AATCGCCGGAGCGGCTGGAGCTTGCGCTTGCTGCGGATCTTACCGAGGAG ATGCTGCAGCGCTTTTGCGCGGAAGCGCCCTTTCACATAGCCTTAGGGGC GGGGGGCGACCGCAAGGTGTGGCGGCGTCTTGCGCAGCTCAGCGTGGACA TTAATGAACTGGCGCTGGTTGGCGCAGCCTCCACCTGCAACGTCGCCACT CTCCAGGTGGTCTACCAGCACCTGTTGAACCAGCGCTGCGACGTTCACTG CTCCATCTGGTGGATCACTGGTGTTGCACTTGCCAAGCACGGGGATACTG GCCTGTGCTTTGCGTGGCTCGCTCCGCAAAACTCGAACGTTGAGGATGCA GCCGGCACGTGGCCTGAGTGGTTCTGTAGTGTGCTGTGCGGCACTGCCGC CAGCAACGGCCATCTAGCATCGCTGCAGTTTTTGCTGGACCGTACGCGTG GACAGGCTCTGTTTGGGCGCTACGCGCCGTTGCATGCAACCGACGTTGTG GAAGAAGATGTTGGTGAGGATGCTGCAGACATCATCCGCGAGACAATGGG CTGGATCGGCGATACCGACTCTCAAGAGCACTACAAGTCGTTGTTGGACT GCGCCGCGGAGGGAGGTGACGTGCGCATGGTGCAGTGGCTGTTGCAGCAA GGCCACAGCGTTACGCCCATTACCTTTGAGGTTGCCGCACACAACGGTCA TCTGCATCTCGTCAAGCACCTGGCTGCACAGGTGAGCAGCCGGTGATGGA GGCAAGGAAATGCGTGCATAGTCTGGTGTACATATCAGGCCTGTACGATC AGCGCACTCACACTACAACAACGAGCAGCTCGCAAACGATGGTCGCCAAT TCGAACAATTGATCGAGTTCAGGCACAGTTTGTGCCGGTTAGTGTAATAT AGATTCAATTCCTAGCTATAGACATTGTCAGTTTAAGATGCTGTGGACAA TGGAACTCATGTTGAATTGTGATTCCCACACAGCCGCTTTTGGTGCCCCA CTGCAGGTCGAGGCACGCATGGCAACAACTCTGAGACTGAAAACAGCCAG CCATTGGCCTTTACGCTTCATGGCACTTCCTTGTGTACATAGCCACCCCC TGACTACTACCTGGTGCATCTTGCCTGCATCGTGGTGCACCCTCTGCCCA GGGCTACGCGTGCGACGCCAACGTGCTGTACAACACCACGCTGGTGGGGG GGGGCATCCCCCCCGCTCAGATGGAGTGGCTCCGCGGCCGCGGCGGCGGC GACTGGAGCCAGGCGGGCATGACGGAGGCGCTGTTGAAGCGCCTCGCCAG CGATCACGCCGACGCCACGTATGCGCTGGCGCAGTGGCTGCTGGCGCAAG GGGCTCAGTGGCCGGAGAGCATCCGCGAGTTGACGCGCAGGGGGGCGCCC ATGCACCACGTTGTGTGGGCGCTGCAGCACGGGTGCGGCTCGGGGGAGGG GGGCTGGACGGCTGAGCACTGCGAGGAAGCGGAGCGCAGCTGCAGAGGCC TCAGGCGGGCTCTGCATGAGCTGGGGTGCCCTTGCGAGTGCGAGGAGCGC GTCGCCATCATGGCGAGCATCGGCGAGCTGCATATGTGAATGAGATGACT TGGAG
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Coding sequence (CDS) from alignment at Contig_230:74908..76612+

>mRNA_17718 ID=mRNA_17718|Name=jgi.p|Trimin1|354314|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1269bp|location=Sequence derived from alignment at Contig_230:74908..76612+ (Tribonema minus UTEX_B_3156 )
ATGGCGTGTGTGCTGCACGCTGATGACTGCACGGCAGCGGTGGCCTCTCG
CGAAGACAAGCTTCAGTCGCTGTTCAGAACGCAGGCCACTGCAGCAGCGC
AATCGCCGGAGCGGCTGGAGCTTGCGCTTGCTGCGGATCTTACCGAGGAG
ATGCTGCAGCGCTTTTGCGCGGAAGCGCCCTTTCACATAGCCTTAGGGGC
GGGGGGCGACCGCAAGGTGTGGCGGCGTCTTGCGCAGCTCAGCGTGGACA
TTAATGAACTGGCGCTGGTTGGCGCAGCCTCCACCTGCAACGTCGCCACT
CTCCAGGTGGTCTACCAGCACCTGTTGAACCAGCGCTGCGACGTTCACTG
CTCCATCTGGTGGATCACTGGTGTTGCACTTGCCAAGCACGGGGATACTG
GCCTGTGCTTTGCGTGGCTCGCTCCGCAAAACTCGAACGTTGAGGATGCA
GCCGGCACGTGGCCTGAGTGGTTCTGTAGTGTGCTGTGCGGCACTGCCGC
CAGCAACGGCCATCTAGCATCGCTGCAGTTTTTGCTGGACCGTACGCGTG
GACAGGCTCTGTTTGGGCGCTACGCGCCGTTGCATGCAACCGACGTTGTG
GAAGAAGATGTTGGTGAGGATGCTGCAGACATCATCCGCGAGACAATGGG
CTGGATCGGCGATACCGACTCTCAAGAGCACTACAAGTCGTTGTTGGACT
GCGCCGCGGAGGGAGGTGACGTGCGCATGGTGCAGTGGCTGTTGCAGCAA
GGCCACAGCGTTACGCCCATTACCTTTGAGGTTGCCGCACACAACGGTCA
TCTGCATCTCGTCAAGCACCTGGCTGCACAGGGCTACGCGTGCGACGCCA
ACGTGCTGTACAACACCACGCTGGTGGGGGGGGGCATCCCCCCCGCTCAG
ATGGAGTGGCTCCGCGGCCGCGGCGGCGGCGACTGGAGCCAGGCGGGCAT
GACGGAGGCGCTGTTGAAGCGCCTCGCCAGCGATCACGCCGACGCCACGT
ATGCGCTGGCGCAGTGGCTGCTGGCGCAAGGGGCTCAGTGGCCGGAGAGC
ATCCGCGAGTTGACGCGCAGGGGGGCGCCCATGCACCACGTTGTGTGGGC
GCTGCAGCACGGGTGCGGCTCGGGGGAGGGGGGCTGGACGGCTGAGCACT
GCGAGGAAGCGGAGCGCAGCTGCAGAGGCCTCAGGCGGGCTCTGCATGAG
CTGGGGTGCCCTTGCGAGTGCGAGGAGCGCGTCGCCATCATGGCGAGCAT
CGGCGAGCTGCATATGTGA
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