mRNA_17718 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835Z1T5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1T5_9STRA) HSP 1 Score: 867 bits (2241), Expect = 0.000e+0 Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 1 Query: 1 MACVLHADDCTAAVASREDKLQSLFRTQATAAAQSPERLELALAADLTEEMLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECEERVAIMASIGELHM 1266 MACVLHADDCTAAVASREDKLQSLFRTQATAAAQSPERLELALAADLTEEMLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECEERVAIMASIGELHM Sbjct: 1 MACVLHADDCTAAVASREDKLQSLFRTQATAAAQSPERLELALAADLTEEMLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECEERVAIMASIGELHM 422
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835Z0H9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0H9_9STRA) HSP 1 Score: 328 bits (842), Expect = 6.140e-106 Identity = 177/328 (53.96%), Postives = 210/328 (64.02%), Query Frame = 1 Query: 265 LVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVE--DAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGED-AADIIRE-TMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECEERVA 1236 L G T A L+ VYQ L ++ + W V LAKHGDTGLC AWL+PQ D + WPEW C VLC AAS+G L +LQFLLDRTRGQALFG Y +D+ E ++ AA+++R T G + H SLL+ AA+GG++R+++WL+QQGH+VTP EV D + LY TLVGG I PAQMEWLR RG GDWS AG++EALLKRLAS H DAT ALA+WLLA+GAQ P S+RELTRRGAP HV WALQHGCG GE WT EHC EAER+ GLR ALH LGCPC C+ R A Sbjct: 87 LDGDDRTPAAACLERVYQFLRGEKEIIEYETWREAAVELAKHGDTGLCLAWLSPQFDAGPSWDRSKEWPEWLCGVLCTAAASSGPLETLQFLLDRTRGQALFGCYTQPRLSDMEEHELAHTYAAEVMRAGTKGAF----PEAHVLSLLEGAAKGGNLRVLRWLMQQGHAVTPFALEVXXXXXXXXXXXXXXXXXXXXDVDALYAATLVGGAIAPAQMEWLRARGAGDWSPAGLSEALLKRLASGHPDATPALAEWLLARGAQCPRSVRELTRRGAPAVHVAWALQHGCGWGEAAWTTEHCNEAERAHAGLRYALHRLGCPCACQHRDA 410
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A836CKN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN3_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.980e-57 Identity = 145/398 (36.43%), Postives = 202/398 (50.75%), Query Frame = 1 Query: 58 KLQSLFRTQATAAAQSPERLELALAADLTEEMLQR--FCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWL-LQQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGA----PMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRG---LRRALHELGCPCEC 1221 K S+ T+ +AAA S RL LAL + + L F A +ALG G +V +R+AQ +++ L+GAA TCN+A L ++ +L+Q+ DV I GV+LA+ GD G C +WLA Q WP F + +C AA ++ +LQFLL RG ALFG L +D+ + DA + D EH +++D AA + ++QWL Q T IT + AA N L +K L QG A D N + LV + P + W+R GGGDWS GMT+ L L T LA+WL +GA WP+++ +L R P+ ++WA+QHGC G WT CE E S ++RALH+LGCPC C Sbjct: 94 KATSVHLTKFSAAAVSQSRLNLALLSTKFTDALPTLSFPARYSLCLALGELGSLEVVQRMAQAGLNVGAEVLIGAADTCNIADLHSLWVGVLSQQ-DVDLEICIEIGVSLARFGDDGSCLSWLAAQLRR----PSAWPAHFINEVCNLAAMWANIPTLQFLL--ARGPALFGTLGTLFLSDI-RSTLPNDALVFV--------DLGGTEHVLTVVDAAAMAANPTVLQWLHSQHAAEFTSITMQEAASNAVLPSLKWLHQQGCAYDINQILQLVLVSVYVTPPAVAWVRSFGGGDWSPQGMTDMLATALLRS----TPGLARWLRVEGAPWPQNLAQLVNRAGNYVKPLT-ILWAVQHGCPFGR--WTTRVCERLESSSASGGAVKRALHDLGCPCAC 468
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835YMG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG8_9STRA) HSP 1 Score: 158 bits (400), Expect = 4.520e-40 Identity = 124/382 (32.46%), Postives = 181/382 (47.38%), Query Frame = 1 Query: 103 SPERLELALAADLTEEMLQ--RFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLL-QQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTR---RGAPMHHVVWALQHGCGSGEGGWTAEHCEEAERSCRG---LRRALHELGCPCEC 1221 +P RL LAL + +L R A ALG G + R+ Q +DI E L GAA +C+ ++LQ ++ L + ++ + G+ LA GD G +WLAPQ + W + ++L AA+ G ++LQFLL RGQ LFG L A + + + D + + D + + +L D AA D +++WL ++ + T IT +VAA N L + L AQG D + L P + W+R G GDWS + + LAS + T ALA+ L A+GA WPE + EL ++WA+Q GC G WT E CE + G ++RALH+LGCPC C Sbjct: 91 APSRLNLALVSGEFTYVLSSLRLTARCELSSALGEAGSVEAVERMQQAGLDIEEEVLNGAAKSCDSSSLQSIWAGPLGSQ-ELDAPRCYEIGIRLAIFGDDGSALSWLAPQLPKAQ----AWSPCYINILSNYAAAWGRTSTLQFLL--ARGQELFGA---LGAVSLADHENTWPLTDKDMDGVWTYRDEEGAKQVMTLTDAAAAADDTAVLRWLQSRRALAFTGITMQVAAANARLPSLTWLRAQGCPHDMAQVCRQLLGSRRATPPAVAWVRRYGTGDWSP----QCMRGMLASAMLNGTPALARRLRAEGAPWPEDLAELVATEIEDVRPQTILWAVQQGCPFGR--WTTEVCELLDDDREGGGAVKRALHDLGCPCAC 456
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835Z2J0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J0_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.110e-39 Identity = 132/413 (31.96%), Postives = 177/413 (42.86%), Query Frame = 1 Query: 79 TQATAAAQSPERLELALAADLTEEMLQRFCAEA-PFHIALGAGGDRKVWRRLAQLS-VDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGV-----ALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQ-----QGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTT--LVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADA------TYALAQWLLAQGAQWPESIRELTRRGAPMH------------HVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCEC 1221 TQ AA S RL+ AL +D E +R + A GA GD + RR L V L GAA CN L ++ + + S+ W G+ LA+ GD G W++ Q WP + LC AA+NGHL +LQFLL G ALFG PL D E M ++L+ A GGD+ VQWLL ++ E+AAH GHL L++ L + DA + +T + G PA ++W+RG G GDWS GMT L L D + +A++LL +GAQWPE R+ P V+WAL+HGC G+ W + C E E +R LH CPC+C Sbjct: 148 TQPAQAAHSHARLDAALRSDDFEAAARRVGRRSGSIARAAGATGDVALVRRCMALGGVQDASWTLTGAARLCNAGLLSALHALVASPENRKVGSLKWDAGMRRWGQVLAECGDGGDALTWVSQQRP-----PRVWPRCYTLSLCQRAAANGHLRTLQFLLGP--GLALFG---PLDEQLAYRAGSNSDNPGRAMEEM-------------TMLEAAVSGGDIATVQWLLDLRIEAYDSELSERVMEIAAHRGHLPLLRWLRGKQCPFDAGTICSTVAGVPGSRCTPAVLQWMRGCGWGDWSAGGMTAMLAAALMPQRTDRWLCEDPNFTVAEYLLREGAQWPEPPRDGALLRGPWDLVGMLSVCKSDKAVLWALRHGCPWGK--WGTDECNEMESRIATAKRVLHSFECPCQC 535
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835YNS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS1_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.550e-38 Identity = 131/406 (32.27%), Postives = 180/406 (44.33%), Query Frame = 1 Query: 40 VASREDKLQSLFRTQATAAAQSPERLELALAADLTEEMLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNV-ATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSV--TPITFEVAAHNGHLHLVKHLAAQGYACDANVL----YNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPMHHVVWAL----QHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECE 1224 V +R + + T A A A++P RLE+ LA + L A GA G +V RR+ QL ++ G A+ C TLQ + + CD + WL+ A WP W+C+ LC TAA NG LA+L+FL+ RGQALFG P + V + A R G+ + + + +L+D AA GG+V +++WL Q+ H++ TP T AA GHL +K L A G D L + G+ P+QMEWLR GG WS+ T ALL L A QWL +GA+WPE + + V AL + GC G WT HC R + + LH GCPCEC+ Sbjct: 75 VTARRQGVPWVCVTAAAAVAEAPARLEMGLACGVR---LPARGGSFDVEEAAGASGSTEVIRRMRQLG-----MSAAGVAAECGEHMTLQTWIDLVPHILCDAY------------DGAQQEAALIWLSQH-------ARPWPVWYCTHLCFTAAENGQLAALKFLMRDDRGQALFGPLIP-------DPSVVDTAGPEWRHAPGYSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQE-HALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLGG-SWSRQTATHALLHLLRDFR---NTAAVQWLRREGAEWPELNTVVNQFDHCDDFVAEALVDAARQGCPWGR--WTPTHCRIVSRGRYSIIKPLHAAGCPCECD 439
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835Z7G5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7G5_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.910e-33 Identity = 96/247 (38.87%), Postives = 133/247 (53.85%), Query Frame = 1 Query: 508 GHLASLQFLLDRTRGQALFGRYAPLHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSV--TPITFEVAAHNGH-LHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPM---HHVVWALQHGCGSGEGGWTAEHC---EEAERSCRGLRRALHELGCPCEC 1221 G + +LQFLL+ GQALFG +DV ++D+ A + R D D +H ++L D A D ++QWL Q ++V T T VAA G L +K L AQG D + + L PP M W+R GGGDWS GMT+ L K L ++ T ALA+WL A+GAQWP+ + E+ A + +++WALQ GC G WT + C E++ S ++RALH+LGCPC C Sbjct: 3 GQITTLQFLLEG--GQALFGSLGTFCLSDV-KDDMQYKACCLFR-------DVDGTQHARTLSDTATMANDAAVLQWL-QSRNAVQFTSKTMLVAADGGAVLANLKWLRAQGCPHDIDKICQIVLDTPWTPPPVMAWVRSCGGGDWSPQGMTDMLAKALLNN----TPALARWLRAEGAQWPKDLAEVVTSKADILISSNILWALQQGCPFGR--WTTQVCGLLEKSHDSGGAVKRALHDLGCPCAC 232
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A835YZ94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ94_9STRA) HSP 1 Score: 140 bits (352), Expect = 4.250e-33 Identity = 116/410 (28.29%), Postives = 176/410 (42.93%), Query Frame = 1 Query: 40 VASREDKLQSLFRTQATAAAQSPERLELALAADLTEEMLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINE----LALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHG----DTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAP-LHATDVVEEDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLL-QQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGG--GIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAPMHH---VVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECE 1224 V +R+ + T +A ++P RLE+ALA L + C A G G +V RL QL + +++ L+GA L + L V W G+ + + + WL+ Q WP W+C+ LC TAA NG LASL+FL+ + GQ LFG L D + + D+ + +G + H+ ++++ AA GG ++++QWL +Q VTP T V G D + + G P+QMEWLR GG WS +T AL L + + WL ++GA WP+ GA + V+WA Q GC G+ WT+E C+ ++ A+H+ CPC+CE Sbjct: 106 VTARQQGAAWVCVTSGSAVVETPARLEMALARGADVPALVKSC---DVQRAAGTSGSMEVIHRLRQLGMVVSDGVVLQVLIGATCARRTGVLYRLPALALESGEQVDHQTWTYAGICVLRSAYDEEEQKAVLIWLSQQ-------VRPWPVWYCTCLCHTAAENGRLASLKFLMHKDCGQVLFGSLVQDLSVIDFSSPERADAPTDLCFQFVGGV------HHHVTVMNRAAAGGHIKVMQWLHHEQPLPVTPQTMSVXXXXXXXXXXXXXXQVGCPYDIAYICKLSFQEGVARATPSQMEWLRSVGG-SWSYEMVTAALYD-LVGYCTSTSKEMIGWLRSEGAPWPQLSELAVAVGAEDLNAAAVLWAAQQGCPWGD--WTSECCDAMSHGRYSIKTAIHDARCPCQCE 495
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A836CDJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ7_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.680e-30 Identity = 121/413 (29.30%), Postives = 174/413 (42.13%), Query Frame = 1 Query: 37 AVASREDKLQSLFRTQATAAAQSPERLELALAADLTEEMLQRFCAEAPFHIALGAGGDRKVWRRLAQLSVDINELALVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHG----DTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYAPLHATDVVE--EDVGEDAADIIRETMGWIGDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSVT--PITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIP--PAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRELTRRGAP-------MHHVVWALQHGCGSGEGGWTAEHCEEAERSCRGLRRALHELGCPCECE 1224 A +R+ + + T +AA ++PER E+ALA ++ L + A GA G +V R L +L V ++ L AA L + V S W WL+ Q + P W+CS LC TAA NG LA+L+FL+ GQALFG P E E + A D I+ + G +L++ AA G V ++QWL Q+ H++ +T G D N L + +L + P QMEWLRG GG WS+ +TEAL + A+ L WL ++GA+WP + L A + V+WA Q GC G+ WT C + R ++ A H GCPC+C+ Sbjct: 2 AATARQQGVPWVCVTSGSAAVETPERQEMALACGISVPALTN---SSDAQCAAGASGSMEVIRHLHRLGVPTSDAVLFSAARARRTGILYRFPVLARERNVQVKMSTWMAVYERFLSDSYNDEQQRAALIWLSQQVRPL-------PVWYCSSLCVTAAENGQLAALKFLMHDDHGQALFGPLIPDSLVIDFESPEWINAPACDYIQTNGTFSGRA-------TLMEKAAASGHVEVLQWLHQE-HALPFRSVTXXXXXXXXXXXXXXXXYEAGCPHDINELCDVSLDNPMMKRAPPQMEWLRGIGG-SWSREQVTEALSSLVGYRGAEK---LISWLRSEGAEWPSLAQTLQGGYAADDCDEGEVGAVLWAAQQGCPWGD--WTPRCCAQVSRGRYSIKEAPHAAGCPCQCD 390
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Match: A0A836CAB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAB5_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.190e-29 Identity = 99/334 (29.64%), Postives = 153/334 (45.81%), Query Frame = 1 Query: 265 LVGAASTCNVATLQVVYQHLLNQRCDVHCSIWWITGVALAKHGDTGLCFAWLAPQNSNVEDAAGTWPEWFCSVLCGTAASNGHLASLQFLLDRTRGQALFGRYA--PLHATDVVEE-----DVGEDAADIIRETMGWI----GDTDSQEHYKSLLDCAAEGGDVRMVQWLLQQGHSVTPITFEVAAHNGHLHLVKHLAAQGYACDANVLYNTTLVGGGIPPAQMEWLRGRGGGDWSQAGMTEALLKRLASDHADATYALAQWLLAQGAQWPESIRE-----LTRRG--AP--MHHVVWALQHGCGSGEGGWTAEHCE--EAERSCRGLRRALHE 1200 L+GAA C+++ LQ +Y + + W +ALA GD WL+ Q WP + + +C +AA NGHLA+LQ+LL RG A+FG + PL D + D G DA D + W G +++ L+D AA G + ++ WL ++G + T AA +GH+ ++ L Q + +Y + PA M+W+R GGGDW+ G+ +L+ H A+A+WL AQGA+WP+++ L R +P + + WA GC G W C +E ++ LHE Sbjct: 218 LIGAARHCDLSLLQSIYDDEILDIGRITPREWCRVALALAASGDDDFALTWLSQQRR----CRARWPRYLLAAMCYSAAFNGHLATLQYLLHPRRGIAVFGPFESPPLEVGDDSDSHDSDSDSGGDALDELLAEARWPVNFNGAGFNRQFTLKLMDKAAGSGSIEVLDWLTEEGFEFSHNTMPYAARHGHVAALQWLRRQDCPHNMEDVYEAAVTSHFATPALMQWIRTYGGGDWTPYGLN-GMLRFAMIYHKHP--AVAEWLRAQGAEWPDTLFHMFYGYLNRNDIFSPPRVEMIAWAASKGCPWGT--WAGYECHTLSSESHSPNAQQLLHE 542 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354314 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17718 ID=mRNA_17718|Name=jgi.p|Trimin1|354314|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1285bp|location=Sequence derived from alignment at Contig_230:74908..76612+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCGTGTGTGCTGCACGCTGATGACTGCACGGCAGCGGTGGCCTCTCGback to top protein sequence of jgi.p|Trimin1|354314 >Trimin1|354314|estExt_Genemark1.C_Ctg_2300013 ID=Trimin1|354314|estExt_Genemark1.C_Ctg_2300013|Name=jgi.p|Trimin1|354314|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=423bp MACVLHADDCTAAVASREDKLQSLFRTQATAAAQSPERLELALAADLTEEback to top mRNA from alignment at Contig_230:74908..76612+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17718 ID=mRNA_17718|Name=jgi.p|Trimin1|354314|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1705bp|location=Sequence derived from alignment at Contig_230:74908..76612+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_230:74908..76612+ >mRNA_17718 ID=mRNA_17718|Name=jgi.p|Trimin1|354314|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1269bp|location=Sequence derived from alignment at Contig_230:74908..76612+ (Tribonema minus UTEX_B_3156 )back to top |