mRNA_17715 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|180833 vs. uniprot
Match: A0A836CFR5_9STRA (GPI ethanolamine phosphate transferase 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFR5_9STRA) HSP 1 Score: 779 bits (2011), Expect = 1.670e-284 Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 1 Query: 1 MPLQISSLLSEDERAHLSESAIGGQDDGCWLPRRHQRVIWVVIDALRFDFARWSDDGGIDGPTAFYHNKLPVLHEVLQAGRGRGLHSGNDTAAPGGRAMLYKFEADPPTVTMQRLKGLTTGALPTFIDFRNNFHSPQIEEDNWVQQAAALGMPLVFMGDDTWASLFPSQFQRAFPFPSFNTRDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALRAVLAAADAARALVLVMGDHGMTEDGNHGGATAAETDAALLLGGRGAGGGVRSGGVREARGAAFQVDLVPTLSLLMGLPIPFGSLGGVLPELFAGPYAHERQPKGTGGPPQSSWRYNEADAYGEPRKHTYWYCRSPPISCYHXXXXXXXXDL 1173 MPLQISSLLSEDERAHLSESAIGGQDDGCWLPRRHQRVIWVVIDALRFDFARWSDDGGIDGPTAFYHNKLPVLHEVLQAGRGRGLHSGNDTAAPGGRAMLYKFEADPPTVTMQRLKGLTTGALPTFIDFRNNFHSPQIEEDNWVQQAAALGMPLVFMGDDTWASLFPSQFQRAFPFPSFNTRDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALRAVLAAADAARALVLVMGDHGMTEDGNHGGATAAETDAALLLGGRGAGGGVRSGGVREARGAAFQVDLVPTLSLLMGLPIPFGSLGGVLPELFAGPYAHERQPKGTGGPPQSSWRYNEADAYGEPRKHTYWYCRSPPISCYHXXXXXXXXDL Sbjct: 1 MPLQISSLLSEDERAHLSESAIGGQDDGCWLPRRHQRVIWVVIDALRFDFARWSDDGGIDGPTAFYHNKLPVLHEVLQAGRGRGLHSGNDTAAPGGRAMLYKFEADPPTVTMQRLKGLTTGALPTFIDFRNNFHSPQIEEDNWVQQAAALGMPLVFMGDDTWASLFPSQFQRAFPFPSFNTRDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALRAVLAAADAARALVLVMGDHGMTEDGNHGGATAAETDAALLLGGRGAGGGVRSGGVREARGAAFQVDLVPTLSLLMGLPIPFGSLGGVLPELFAGPYAHERQPKGTGGPPQSSWRYNEADAYGEPRKHTYWYCRSPPISCYHXXXXXXXXDL 391
BLAST of jgi.p|Trimin1|180833 vs. uniprot
Match: D8LQQ0_ECTSI (GPI ethanolamine phosphate transferase 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQQ0_ECTSI) HSP 1 Score: 305 bits (781), Expect = 6.540e-90 Identity = 197/415 (47.47%), Postives = 227/415 (54.70%), Query Frame = 1 Query: 91 LPRRHQ--RVIWVVIDALRFDFARWS--DDGGI---DGPTA----FYHNKLPVLHEVLQAGRGRGLHSGNDT--------AAPGGRAMLYKFEADPPTVTMQRLKGLTTGALPTFIDFRNNFHSPQIEEDNWVQQA--------AALG-----------------MPLVFMGDDTWASLFPSQFQRAFPFPSFNTRDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALRAVLAAADAARALVLVMGDHGMTEDGNHGGATAAETDAALLLGGR------GAG-------GGV------------------------------RSGGVREARG----------------------AAFQVDLVPTLSLLMGLPIPFGSLGGVLPELFAGPY 1008 L R+ Q RV+WVV+DALR+DFA +S DD G D P + Y N LPV++E + A G +L++FEADPPTVTMQRLKGLTTG LPTFIDFR+NFHS QI EDNWV Q A G LVFMGDDTW SL+P+ F R++PFPSFNTRDLHTVDDGVL+ L EL RDW VLVAHFLGVDHVGHT GPA++AM DKL QM+AALR V D +V V+GDHGMTEDGNHGGAT ET AALL+ R G G GG R GG + G Q+DLVPT+SLL+G PIPFGSLGGV+PE+F G Y Sbjct: 43 LERQSQCDRVVWVVVDALRYDFAAFSPPDDAGQGLQDKPHSAGARHYLNHLPVINEAIGGXXXXXXXXXXXXXXXXXXXXAFEGSGGVLFQFEADPPTVTMQRLKGLTTGGLPTFIDFRDNFHSAQIAEDNWVAQVRERAARRRGASGDVNAXXXXXXXXXXXXXXELVFMGDDTWTSLYPTYFSRSYPFPSFNTRDLHTVDDGVLSHLSTELGKRDWDVLVAHFLGVDHVGHTFGPASQAMEDKLDQMNAALRTVFEGVDD-ETVVFVLGDHGMTEDGNHGGATPEETGAALLVWSRSGERLLGPGFKNRRNSGGTPSSRRXXXXXXXXXXXXXXXXXXXXXXXXRRQGGPSQGHGDVAAGEEEGSEEDHSGPVPAARRVAQIDLVPTISLLLGTPIPFGSLGGVIPEVFGGAY 456
BLAST of jgi.p|Trimin1|180833 vs. uniprot
Match: A0A8K1CJ07_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJ07_PYTOL) HSP 1 Score: 297 bits (761), Expect = 5.930e-89 Identity = 164/325 (50.46%), Postives = 211/325 (64.92%), Query Frame = 1 Query: 46 HLSESAIGGQDDGCWLPRRHQRVIWVVIDALRFDF-ARWSDDGGIDGPTAFYHNKLPVLHEVLQAGRGRGLHSGNDTAAPGGRAMLYKFEADPPTVTMQRLKGLTTGALPTFIDFRNNFHSPQIEEDNWVQQAAALGMPLVFMGDDTWASLFPSQFQRAFPFPSFNTRDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALRAVLAAADAARALVLVMGDHGMTEDGNHGGATAAETDAALLLGGRGAGGGVRSGGVREARGAAFQVDLVPTLSLLMGLPIPFGSLGGVLPELFAGPYAHE 1017 H S + + + CW+PRR +RV++VVIDALRFDF A SDD P++FY N LPVL+ L+ + HS L+KF ADPPT+TMQRLKGLTTG+LPTF+D ++N S +I EDN ++Q P+VFMGDDTW SL+ F R + F SFN +DLHTVD GV+ L EL DW +L+AHFLGVDHVGHTHGP++ M DKL +M++ L +L L+L+MGDHGM+ DGNHGGA+ ET AAL L + V S + QVDLVPT++LL G+PIPFG+LG V+P+LF A+E Sbjct: 60 HHDASGVTVESESCWMPRRFRRVVFVVIDALRFDFVASPSDD-----PSSFYLNHLPVLNATLET---QPTHSA-----------LFKFVADPPTMTMQRLKGLTTGSLPTFLDIKDNMASSEITEDNLIRQMHQQQRPIVFMGDDTWDSLYEKYFTRKYSFDSFNVKDLHTVDQGVIRHLFPELKESDWGLLIAHFLGVDHVGHTHGPSSVYMTDKLKEMNSVLTRLLGELPDDDTLLLIMGDHGMSADGNHGGASDEETGAALFLYSKQPL--VSSAAMDNWSREVPQVDLVPTIALLTGIPIPFGNLGAVIPQLFYHQSANE 363
BLAST of jgi.p|Trimin1|180833 vs. uniprot
Match: A0A8J5JAW6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JAW6_9STRA) HSP 1 Score: 284 bits (726), Expect = 8.950e-89 Identity = 165/334 (49.40%), Postives = 210/334 (62.87%), Query Frame = 1 Query: 58 SAIGGQDDGCWLPRRHQRVIWVVIDALRFDFARWSDDGGIDGPTAFYHNKLPVLHEVLQAGRGRGLHSGNDTAAPGGRAMLYKFEADPPTVTMQRLKGLTTGALPTFIDFRNNFH-SPQIEEDNWVQQAAALGMPLVFMGDDTWASLFPSQFQRAFPFPSFNTRDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALRAVLAAA----DAARALVLVMGDHGMTEDGNHGGATAAETDAALLLGGRGAGGGVRSGGVREARGAAF----------------QVDLVPTLSLLMGLPIPFGSLGGVLPELF 996 S+ G GCW+PRR +RV++VVIDALRFDFA G + FY ++LP+L++ L A+ A+L KF ADPPT+TMQRLKGLTTG+LPTF+D ++N S QI EDN ++Q A +VFMGDDTW SL+ +F R F F SFN +DLH+VD GV A L EL DW +L+AHFLGVDHVGHTHGP++ MA+KL +M+ L+ +L D L+ V+GDHGM+ DGNHGGA+ ET AAL L + A V +GG ++ A QVDLVPTL+LL GLPIPFG+LG V+P LF Sbjct: 60 SSDDGAPKGCWMPRRFRRVVFVVIDALRFDFAA---TGSSAQRSTFYSDRLPILNDTL--------------ASEPEHALLLKFVADPPTMTMQRLKGLTTGSLPTFLDIKDNMAASSQIVEDNLLRQLRAQQRGVVFMGDDTWDSLYAREFTRKFAFDSFNVKDLHSVDRGVTAHLFPELQKPDWDLLIAHFLGVDHVGHTHGPSSVFMAEKLDEMNGILKKLLQTLKDMPDGDDVLLAVLGDHGMSADGNHGGASDEETGAALFLYSKAAL--VATGGENDSEEAKELKRYAERILDSSQEVPQVDLVPTLALLSGLPIPFGNLGSVIPSLF 374
BLAST of jgi.p|Trimin1|180833 vs. uniprot
Match: A0A6A3MFR2_9STRA (GPI ethanolamine phosphate transferase 3 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MFR2_9STRA) HSP 1 Score: 281 bits (718), Expect = 7.410e-88 Identity = 163/321 (50.78%), Postives = 205/321 (63.86%), Query Frame = 1 Query: 79 DGCWLPRRHQRVIWVVIDALRFDFARWSDDGGIDGPTAFYHNKLPVLHEVLQAGRGRGLHSGNDTAAPGGRAMLYKFEADPPTVTMQRLKGLTTGALPTFIDFRNNFH-SPQIEEDNWVQQAAALGMPLVFMGDDTWASLFPSQFQRAFPFPSFNTRDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALRAVLAAA----DAARALVLVMGDHGMTEDGNHGGATAAETDAALLLGGRG---AGGGVRSGGVREARGAAF-------QVDLVPTLSLLMGLPIPFGSLGGVLPELF 996 +GCW+PRR +RV++VVIDALRFDFA G +AFY ++LPVL+E L A+ A+L KF ADPPT+TMQRLKGLTTG+LPTF+D ++N S QI EDN ++Q A +VFMGDDTW +L+ +F R F F SFN +DLH+VD GV L EL DW +L+AHFLGVDHVGHTHGP++ MA+KL +M+ L +L D L+ V+GDHGM+ DGNHGGA+ ET AAL L + A GG +RE QVDLVPTL+LL GLPIPFG+LG ++P LF Sbjct: 67 EGCWMPRRFRRVVFVVIDALRFDFAA---AGPSTQRSAFYSDRLPVLNETL--------------ASEPEHALLLKFVADPPTMTMQRLKGLTTGSLPTFLDIKDNMAASSQIVEDNLLRQLRAQQRGVVFMGDDTWDALYAREFTRKFAFDSFNVKDLHSVDRGVTTHLFPELHKPDWDLLIAHFLGVDHVGHTHGPSSVFMAEKLDEMNGVLEKLLQELKDMPDGEDVLLAVLGDHGMSADGNHGGASDDETGAALFLYSKASLVATGGEVDDELREYAERILDSSREVPQVDLVPTLALLSGLPIPFGNLGSIIPSLF 370
BLAST of jgi.p|Trimin1|180833 vs. uniprot
Match: A0A6A3MZP5_9STRA (GPI ethanolamine phosphate transferase 3 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MZP5_9STRA) HSP 1 Score: 282 bits (722), Expect = 1.700e-86 Identity = 164/321 (51.09%), Postives = 206/321 (64.17%), Query Frame = 1 Query: 79 DGCWLPRRHQRVIWVVIDALRFDFARWSDDGGIDGPTAFYHNKLPVLHEVLQAGRGRGLHSGNDTAAPGGRAMLYKFEADPPTVTMQRLKGLTTGALPTFIDFRNNFH-SPQIEEDNWVQQAAALGMPLVFMGDDTWASLFPSQFQRAFPFPSFNTRDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALRAVLAAA----DAARALVLVMGDHGMTEDGNHGGATAAETDAALLLGGRG---AGGGVRSGGVREARGAAF-------QVDLVPTLSLLMGLPIPFGSLGGVLPELF 996 +GCW+PRR +RV++VVIDALRFDFA G +AFY ++LPVL+E L A+ A+L KF ADPPT+TMQRLKGLTTG+LPTF+D ++N S QI EDN ++Q A +VFMGDDTW +L+ +F R F F SFN +DLH+VD GV L EL DW +L+AHFLGVDHVGHTHGP++ MA+KL +M+ L+ +L D L+ V+GDHGM+ DGNHGGA+ ET AAL L + A GG +RE QVDLVPTL+LL GLPIPFG+LG V+P LF Sbjct: 67 EGCWMPRRFRRVVFVVIDALRFDFAA---AGPSTQRSAFYSDRLPVLNETL--------------ASEPEHALLLKFVADPPTMTMQRLKGLTTGSLPTFLDIKDNMAASSQIVEDNLLRQLRAQQRGVVFMGDDTWDALYAREFTRKFAFDSFNVKDLHSVDRGVTTHLFPELHKPDWDLLIAHFLGVDHVGHTHGPSSVFMAEKLDEMNGVLKKLLQELKDMPDGEDVLLAVLGDHGMSADGNHGGASDDETGAALFLYSKASLVATGGGADDELREYAERIIDSSREVPQVDLVPTLALLSGLPIPFGNLGSVIPSLF 370
BLAST of jgi.p|Trimin1|180833 vs. uniprot
Match: A0A329STP0_9STRA (GPI ethanolamine phosphate transferase 3 n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329STP0_9STRA) HSP 1 Score: 283 bits (723), Expect = 7.910e-86 Identity = 165/334 (49.40%), Postives = 209/334 (62.57%), Query Frame = 1 Query: 58 SAIGGQDDGCWLPRRHQRVIWVVIDALRFDFARWSDDGGIDGPTAFYHNKLPVLHEVLQAGRGRGLHSGNDTAAPGGRAMLYKFEADPPTVTMQRLKGLTTGALPTFIDFRNNFH-SPQIEEDNWVQQAAALGMPLVFMGDDTWASLFPSQFQRAFPFPSFNTRDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALRAVLAAA----DAARALVLVMGDHGMTEDGNHGGATAAETDAALLLGGRGAGGGVRSGGVREARGAAF----------------QVDLVPTLSLLMGLPIPFGSLGGVLPELF 996 S+ G GCW+PRR +RV++VVIDALRFDFA G + FY ++LP+L++ L A+ A+L KF ADPPT+TMQRLKGLTTG+LPTF+D ++N S QI EDN ++Q A +VFMGDDTW SL+ +F R F F SFN +DLH+VD GV A L EL DW +L+AHFLGVDHVGHTHGP++ MA+KL +M+ L+ +L D L+ V+GDHGM+ DGNHGGA+ ET AAL L + A V +GG + A QVDLVPTL+LL GLPIPFG+LG V+P LF Sbjct: 60 SSDDGAPKGCWMPRRFRRVVFVVIDALRFDFAA---TGSSAQRSTFYSDRLPILNDTL--------------ASEPEHALLLKFVADPPTMTMQRLKGLTTGSLPTFLDIKDNMAASSQIVEDNLLRQLRAQQRGVVFMGDDTWDSLYAREFTRKFAFDSFNVKDLHSVDRGVTAHLFPELQKPDWDLLIAHFLGVDHVGHTHGPSSVFMAEKLDEMNGILKKLLQTLKDMPDGDDVLLAVLGDHGMSADGNHGGASDEETGAALFLYSKAAL--VATGGENDNEEAKELKRYAERILDSSQEVPQVDLVPTLALLSGLPIPFGNLGSVIPSLF 374
BLAST of jgi.p|Trimin1|180833 vs. uniprot
Match: B3RS53_TRIAD (GPI ethanolamine phosphate transferase 3 n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3RS53_TRIAD) HSP 1 Score: 282 bits (721), Expect = 1.080e-85 Identity = 148/308 (48.05%), Postives = 201/308 (65.26%), Query Frame = 1 Query: 73 QDDGCWLPRRHQRVIWVVIDALRFDFARWSDDGGIDGPTAFYHNKLPVLHEVLQAGRGRGLHSGNDTAAPGGRAMLYKFEADPPTVTMQRLKGLTTGALPTFIDFRNNFHSPQIEEDNWVQQAAALGMPLVFMGDDTWASLFPSQFQRAFPFPSFNTRDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALRAVLAAADAARALVLVMGDHGMTEDGNHGGATAAETDAALLLGGRGAGGGVRSGGVREARGAAFQVDLVPTLSLLMGLPIPFGSLGGVLPELF 996 + D C +P ++ R I ++IDALRFDF ++ ++ ++Y NKL ++HE++ T P ++ LY+F ADPPT TMQR+KGLTTG+LPTF+D +NF S QI EDN++ Q L +VFMGDDTW L+P+ F R+ PFPSFN +DLH+VD+GV+ L E+ DW VL+AHFLGVDH GHT+GP M++KL QMD LR ++A D ++L+MGDHGMT G+HGG + AE AAL + +G + +G + Q DLVPT+SLL+GLPIPF +LG V ELF Sbjct: 61 EKDTCTIPAQYHRAILIIIDALRFDFVKYDENWM---GQSYYRNKLKIIHELM-------------TTRPN-QSRLYQFMADPPTTTMQRIKGLTTGSLPTFVDAGSNFQSSQISEDNFIHQLRQLNKTIVFMGDDTWEGLYPNVFHRSHPFPSFNVKDLHSVDNGVVKHLMPEMHRHDWSVLIAHFLGVDHCGHTYGPNHPEMSNKLIQMDTILRKIIANIDN-DTILLIMGDHGMTRTGDHGGDSDAEITAALFVY---SGRPINNGRPDKGWKTISQADLVPTISLLLGLPIPFANLGLVADELF 347
BLAST of jgi.p|Trimin1|180833 vs. uniprot
Match: K3X8C6_GLOUD (GPI ethanolamine phosphate transferase 3 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8C6_GLOUD) HSP 1 Score: 278 bits (711), Expect = 1.600e-85 Identity = 149/313 (47.60%), Postives = 199/313 (63.58%), Query Frame = 1 Query: 76 DDGCWLPRRHQRVIWVVIDALRFDFARWSDDGGIDGPTAFYHNKLPVLHEVLQAGRGRGLHSGNDTAAPGGRAMLYKFEADPPTVTMQRLKGLTTGALPTFIDFRNNFHSPQIEEDNWVQQAAALGMPLVFMGDDTWASLFPSQFQRAFPFPSFNTRDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALRAVLAAADAAR-ALVLVMGDHGMTEDGNHGGATAAETDAALLLGGRGAGGGVRSGGVREARGAAF-----QVDLVPTLSLLMGLPIPFGSLGGVLPELF 996 D+GCW+P+R++R+++VVIDALR+DF D +FY + LPV +VL H N ++L KF ADPPT+TMQRLKGLTTG+LPTF+D ++N S +I EDN ++Q + +VFMGDDTW L+ F R + + SFN +DL TVD+GV+ L EL DW +L+AHFLGVDHVGHTHGP++ M KL +M++ ++ +L + L+ VMGDHGM+ DGNHGGAT ET AAL L + E + QVDLVPTL+LL GLPIPFG+LG ++P+LF Sbjct: 76 DEGCWMPQRYKRIVFVVIDALRYDFVADGGDAAQSSSPSFYLHHLPVFTDVLVK------HPNN--------SLLLKFVADPPTMTMQRLKGLTTGSLPTFLDIKDNMASTEIVEDNLIKQMSEQQRKIVFMGDDTWDGLYAKHFARKYSYDSFNVKDLDTVDNGVIRHLFPELQQDDWGLLIAHFLGVDHVGHTHGPSSPFMTKKLDEMNSVMKRLLKELEQDEDTLLAVMGDHGMSADGNHGGATDDETGAALFLYSK-----KHLTAAHEKDRDTWPHEVPQVDLVPTLALLSGLPIPFGNLGSIIPQLF 369
BLAST of jgi.p|Trimin1|180833 vs. uniprot
Match: A0A067CQW9_SAPPC (GPI ethanolamine phosphate transferase 3 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQW9_SAPPC) HSP 1 Score: 285 bits (730), Expect = 3.030e-85 Identity = 161/322 (50.00%), Postives = 204/322 (63.35%), Query Frame = 1 Query: 82 GCWLPRRHQRVIWVVIDALRFDFARWSDDGGIDGPTA----FYHNKLPVLHEVLQAGRGRGLHSGNDTAAPGGRAMLYKFEADPPTVTMQRLKGLTTGALPTFIDFRNNFHSPQIEEDNWVQQAAALGMPLVFMGDDTWASLFPSQFQRAFPFPSFNTRDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALRAVLAAADAARALVLVMGDHGMTEDGNHGGATAAETDAALLLGGR--------GAGGGVRS-----GGVREARGAAFQVDLVPTLSLLMGLPIPFGSLGGVLPELF 996 GCW ++ +RV++VVIDALR+DF + + + F+ N LP +H VL AA ++LY+F AD PT+TMQRLKGLTTG LPTF+D ++N S +I ED+WVQQ L +VFMGD+TW +L+ +F R + + SFN +DLHTVD+GVLA + ELA DW VL+AHFLGVDHVGHT+GP + M KL QMDA L +LA + LV+V+GDHGM+EDGNHGGAT ET AAL L + GG S G R QVDLVPTLSLL+GLPIPFG+LG V+P +F Sbjct: 54 GCWYDQKFKRVVYVVIDALRYDFMHRAPRDEVLAKDSIGGRFFLNHLPHVHAVL--------------AAQPSHSLLYRFVADAPTMTMQRLKGLTTGTLPTFLDIKDNMQSTEIVEDSWVQQLVLLNKSIVFMGDNTWDALYGGKFMRNYSYDSFNVKDLHTVDNGVLAHIFDELALPDWDVLIAHFLGVDHVGHTYGPNSPYMETKLDQMDAFLETLLATVED-DTLVVVLGDHGMSEDGNHGGATDDETGAALFLYSKTPLHHAIAAPDGGTLSLFNHVVGRRSNEYTVAQVDLVPTLSLLLGLPIPFGNLGAVIPHVF 360 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|180833 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17715 ID=mRNA_17715|Name=jgi.p|Trimin1|180833|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1176bp|location=Sequence derived from alignment at Contig_230:57646..60919+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCCCTTGCAGATCTCAAGTTTGCTATCGGAGGACGAGCGTGCCCACCTback to top protein sequence of jgi.p|Trimin1|180833 >Trimin1|180833|e_gw1.230.28.1 ID=Trimin1|180833|e_gw1.230.28.1|Name=jgi.p|Trimin1|180833|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=392bp MPLQISSLLSEDERAHLSESAIGGQDDGCWLPRRHQRVIWVVIDALRFDFback to top mRNA from alignment at Contig_230:57646..60919+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17715 ID=mRNA_17715|Name=jgi.p|Trimin1|180833|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3274bp|location=Sequence derived from alignment at Contig_230:57646..60919+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_230:57646..60919+ >mRNA_17715 ID=mRNA_17715|Name=jgi.p|Trimin1|180833|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1176bp|location=Sequence derived from alignment at Contig_230:57646..60919+ (Tribonema minus UTEX_B_3156 )back to top |