mRNA_17617 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835Z2X8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2X8_9STRA) HSP 1 Score: 759 bits (1959), Expect = 4.820e-276 Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 3
Query: 24 MIVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR 1214
MIVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR
Sbjct: 1 MIVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR 397
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A836CIY5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIY5_9STRA) HSP 1 Score: 510 bits (1313), Expect = 1.870e-176 Identity = 288/377 (76.39%), Postives = 309/377 (81.96%), Query Frame = 3
Query: 78 EALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEM 1208
+ALS +AM AAL +MSLLRRSGTPPD AYTYA RA GG AQSAQK +QLLQEMADA ALDLFAETEATHPHLLTVDAWN+LLAVL YSNE ERAVAKAAEMVERGL L+A+TYAQLLGAYALLADDAK+EAL AGMRAAGVPLTA CRY VRGYA+GGHLQ AE+AFEAA ASGDA+P MVKAM+RGCRRARDAQRAERWLRRALS+GLAPTASAWHLAVETAHEAGDA AADALWR+AEAAGALSLYKAM T G VDV+Q SLLR ASALDLS CD G+A AARAAARDLRRAPPPA YI+TG S PKQ IAQAVTAIMRD GA++SKE+GRG+IWKAEM
Sbjct: 103 QALSPTRAMSAALIMMSLLRRSGTPPDRGAYTYADRALGG-AQSAQKADQLLQEMADAXXXXXXXXXXXXXXXXXXXXXXXXALDLFAETEATHPHLLTVDAWNQLLAVLNYSNELERAVAKAAEMVERGLALDAETYAQLLGAYALLADDAKLEALAAGMRAAGVPLTAACRYCGVRGYALGGHLQRAEDAFEAAVASGDADPKMVKAMLRGCRRARDAQRAERWLRRALSLGLAPTASAWHLAVETAHEAGDADAADALWREAEAAGALSLYKAMSTLHGGCGRAVDVNQPSLLRRLHASALDLSRCDAGLAHAAARAAARDLRRAPPPANRYIFTGSSKPKQVAIAQAVTAIMRDAGAQVSKESGRGNIWKAEM 478
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835Z883_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z883_9STRA) HSP 1 Score: 492 bits (1267), Expect = 9.570e-171 Identity = 277/397 (69.77%), Postives = 302/397 (76.07%), Query Frame = 3
Query: 24 MIVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR 1214
MIVQQGH+PDI VFH+VL+A+S ++M A +VM+LLRRSGTP S +WQRALDLFAETEA HPHLLT+DAWNRLLAVLV S PERAVAKAAEMVE GL L+A+TYAQLLGAYALLADDAK+EALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQ AE+AFEAA ASGDAEPTMVKAM+RGCRRARD RA R ++RAL +GL T +AWHLAVETAHEAGDAGAADALWRDAEA GALSLYK MW GS+TLVVDVD+ S+LR PLASALD+S CD GVA AARAAARDLRRAPPPAV YI+TG S KQ IAQAVTAIMRD GA +SKEAGRG IWKAEM R
Sbjct: 1 MIVQQGHQPDIGVFHLVLKAMSTTRSMRTAQSVMALLRRSGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXRPSNAWQRALDLFAETEAKHPHLLTMDAWNRLLAVLVNSGVPERAVAKAAEMVEHGLKLDAETYAQLLGAYALLADDAKLEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQRAEDAFEAAVASGDAEPTMVKAMLRGCRRARDVPRARRLVQRALFLGLTLTVAAWHLAVETAHEAGDAGAADALWRDAEATGALSLYKDMWNPPGSSTLVVDVDRTSVLRRPLASALDISRCDAGVAHAAARAAARDLRRAPPPAVRYIFTGGSTAKQVAIAQAVTAIMRDAGAHVSKEAGRGGIWKAEMRR 396
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835Z7A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7A9_9STRA) HSP 1 Score: 414 bits (1063), Expect = 1.090e-137 Identity = 252/404 (62.38%), Postives = 272/404 (67.33%), Query Frame = 3
Query: 3 AVLALRQMIVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR 1214
AV AL + IVQQGH+PDI VFH+VLEALS ++MP ALDLFAE A HP LLTV AWNRLLAVL+ S +PE AVAKAAEM ERGL LNADTYA LLGAYALL D A VE L AGM A G PLTA RYRVVRGYAMGGHLQ AE+A EAA ASGDA+PTMV AM+RGCR ARD R +RWL+R+LS+GLA TASAWHLAV TAH AGDAGAADALWRDAEAAGA SLYKAM T RG VDV+Q SLLR P ASA DLS CDVGVA AARAAARDLRRAPPPAV+YIYTG SNPKQD IA+AVTAIM D GA +SKE+GRG IWKAEM +
Sbjct: 144 AVSALHK-IVQQGHQPDIEVFHLVLEALSTTRSMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXALDLFAEVGAAHPRLLTVHAWNRLLAVLIDSGKPECAVAKAAEMAERGLTLNADTYAHLLGAYALLGDHANVEKLAAGMCAKGAPLTAAGRYRVVRGYAMGGHLQRAEDALEAAIASGDADPTMVIAMLRGCRDARDLPRTKRWLQRSLSLGLA-TASAWHLAVGTAHAAGDAGAADALWRDAEAAGAPSLYKAMRTLRGGCGRAVDVNQPSLLRRPHASAPDLSRCDVGVAHAAARAAARDLRRAPPPAVVYIYTGHSNPKQDVIARAVTAIMLDAGAHVSKESGRGAIWKAEMRK 544
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835YPB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPB5_9STRA) HSP 1 Score: 410 bits (1055), Expect = 2.270e-137 Identity = 218/396 (55.05%), Postives = 289/396 (72.98%), Query Frame = 3
Query: 27 IVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR 1214
+V++GH+P+I FH VLE LS + + +L V++L+R+ GTP D++AY YAL ACGG + Q +QLL+EM AG+ D+ TF AA S+ WQRALDLFAE EA +PHL+TV WNRLL VL+ + +PE+A+AK AEMVERGL LN++T++ LLGA+A LAD ++ ALT+ +RAAGV +T CR++++ GYA+ GHLQ AE A EAA SG A P M+ A++ GCR DA RA+RWL+R+LS+GL P+A+ WH+A+ETA E GD GAADALW DAEAAGALS YK M + L+VD+D+ S+LR PL SALD+S C+V +A A RAAAR+L + PPPA+ YI TG NPKQ A+A+ IM+D GA++S+EAG G +WK M R
Sbjct: 84 LVERGHQPNINAFHFVLEPLSRKRILSTSLIVVALMRQCGTPLDTKAYHYALGACGG-QHAMQHADQLLREMKAAGVAADQHTFAAAAHACIVSKKWQRALDLFAEIEADYPHLVTVGMWNRLLRVLIRTGQPEQAIAKGAEMVERGLKLNSETFSYLLGAHARLADQTQITALTSAVRAAGVRVTHACRFQIIEGYALTGHLQLAEEALEAAVQSGQARPDMIMAIVSGCRLVGDASRAQRWLQRSLSLGLTPSAATWHMAIETAQEGGDEGAADALWHDAEAAGALSFYKVMRRNK-EGVLIVDLDRTSVLRQPLKSALDVSRCNVVLAHAALRAAARELAQMPPPAIRYICTGAFNPKQHAAAKALAEIMQDAGAQVSREAGTGGLWKVTMPR 477
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835YLB5_9STRA (PPC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB5_9STRA) HSP 1 Score: 319 bits (817), Expect = 2.250e-101 Identity = 190/386 (49.22%), Postives = 242/386 (62.69%), Query Frame = 3
Query: 66 HIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTYALRAC--GGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAM--WTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMS 1211
H +L + A L++ SL G T+ALR+C GG Q+ + QLLQ+M +AGL D+ +F AALL SRSWQRAL LFAE +A HP L+TVD WNRLL VLV S++P++A+A A +M ERG A TY+ +LGA A L D K+ AL + M+AA + LT CR++++ GYA G +HAE A EAA GDA+P M ++R CR RD RA WL+R+LS+ APTA WH AVE AH AGDA AADALWRDA+AA SLY M + V D+ SLLR P SALD+S C GVA A RAAAR+L +A PPA Y +TG N KQ+++A+A AIMR+ G + K AG +WKAEM+
Sbjct: 105 HEILSLVGTLSPDGAHLHI-SLGDAQGNVMGGHLQTHALRSCEGAGGKQAMLRAGQLLQDMTEAGLISDQPSFAAALLACRFSRSWQRALGLFAELDANHPDLVTVDMWNRLLDVLVSSSQPKQAIANAVQMAERGFLFGAGTYSLVLGACASLGDHNKLAALVSEMQAADMQLTPVCRFQIISGYASSGCQRHAEKALEAAVKHGDAQPHMFMPLLRACRSMRDVSRARHWLQRSLSLSFAPTADMWHEAVEMAHAAGDADAADALWRDAQAARIPSLYNVMRMQSVGVVQKFFVSFDEPSLLREPHHSALDVSSCSRGVAHAALRAAARELSQARPPAFRYFFTGAFNRKQNKVAEAAVAIMREAGVWVLKVAGNPGLWKAEMA 489
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A836CEM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM6_9STRA) HSP 1 Score: 293 bits (751), Expect = 5.010e-88 Identity = 164/306 (53.59%), Postives = 212/306 (69.28%), Query Frame = 3
Query: 240 MADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNT--LVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRD 1151
MA+AG+ D+ TFGAAL HSR WQRAL+LFA+ EA HP L++V WNRLL+VLV++N+P+ A AKAA M ERG+ +A TY+ LLGA ALLAD K++ L + MR AGV +T +C ++RGYA GGH Q AE A +AA ASG A P + +M+ C+ +D A RWL R S+GLA T W +AV+TAHEAGDA AADALWRDA AAG +S YKAM T + + L+V+ D S L+ P SALDL+ C + VA A R AAR+LR+ P PA+ YI+TG +P+Q+ +A+A IMRD
Sbjct: 1 MAEAGVAADKHTFGAALNACCHSRDWQRALELFADMEAHHPDLVSVHLWNRLLSVLVFTNQPQAAAAKAAAMAERGVPYDAVTYSYLLGASALLADSTKIDMLMSDMREAGVEVTLQCHEEIIRGYAAGGHAQLAEEALQAAVASGYARPFLAMPLMKRCKSTQDVAGARRWLERLPSLGLATTPGMWLVAVQTAHEAGDADAADALWRDAWAAGVVSPYKAMRTVQTATGRFLIVERDTPSPLQQPHKSALDLTRCSIAVAHVALREAARELRQMPSPAIRYIFTGAVSPRQEAVAEAAITIMRD 306
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A836C956_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C956_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.520e-67 Identity = 120/233 (51.50%), Postives = 158/233 (67.81%), Query Frame = 3
Query: 213 QKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMW 911
Q ++L +EM + GL+ D TF AA S+ WQRAL++F E EA HP L+TV WN LLAVL+ +PE VAK AEM + GL LN TY++LLGA+A L D KV+++ + M+AAGV +T CR +V YA G LQ AE EAA G +P M+K M+RGC R D RA+RWL+R+LS+GL P + WH+A+++AH GD A DALWRDAEAAGAL+LY+++W
Sbjct: 2 QSADKLQREMKEVGLSADAHTFTAAFKACYASKDWQRALNIFLEMEAQHPKLVTVSMWNELLAVLLNGGKPELLVAKVAEMAKCGLKLNTLTYSRLLGAHAALGDRTKVDSVISEMQAAGVEVTPRCRSNIVDAYATRGELQLAEETLEAAVKEGAVQPHMIKHMVRGCMRQGDVPRAQRWLQRSLSLGLNPPEATWHMAIDSAHTGGDINAVDALWRDAEAAGALNLYRSIW 234
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835YQI6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQI6_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.940e-66 Identity = 176/426 (41.31%), Postives = 220/426 (51.64%), Query Frame = 3
Query: 3 AVLALRQMIVQQGHRPDIRVFHIVLEALSAAK--AMPAALNVMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRS-WQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYRVVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALS----LYKAMWTFRGSN----------TLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEM-SR*EPP 1226
AV AL + V+ GHRPD+++FH+VL ALS + AM AAL+V+ L+R S S W+RAL LF + EA HP L+TV WNRLL M RG+ +A TY++LL A+AL D+ V AL A MRAAG+ L A Y+ +RGYA GGH + AE A EAA SG AE M ++ CRRARDA RA RWLRRALS+GLA AH AGD GAADALWRDA+AAGA + YKAM G + L+VDVD + LR SALD+S C G+ A RA A LR APPPA+ Y++TG + +Q E A+A AI+R GA +S G +WKA + +R PP
Sbjct: 121 AVFALAGL-VRHGHRPDVKLFHLVLRALSHGRDVAMSAALHVVELMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSASDWRRALALFEQAEADHPSLITVHTWNRLLG-----------------MARRGVPRDAVTYSRLLEAHALRGDEGGVAALVADMRAAGMELAARHCYQTIRGYAEGGHARLAEAALEAAVESGGAEAFMFMPVLAECRRARDAPRARRWLRRALSLGLA------------AHAAGDDGAADALWRDAQAAGADAGAPCRYKAMRRSGGGDGGSGGAAERHLLLVDVDAPAPLRGARDSALDVSRCGRGMTRAALRAEAAALRAAPPPALRYVFTGAATQQQRETAEADVAILRSAGAHVSVVGRGGALWKAVVPARRAPP 516
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Match: A0A835YKZ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKZ3_9STRA) HSP 1 Score: 206 bits (525), Expect = 6.650e-59 Identity = 147/402 (36.57%), Postives = 213/402 (52.99%), Query Frame = 3
Query: 30 VQQGHRPDIRVFHIVLEALSAAKAMPAALN-VMSLLRRSGTPPDSRAYTYALRACGGGAQSAQKVNQLLQEMADAGLTHDEDTFGAALLTFGHSRSWQRALDLFAETEATHPHLLTVDAWNRLLAVLVYSNEPERAVAKAAEMVERGLDLNADTYAQLLGAYALLADDAKVEALTAGMRAAGVPLTAECRYR-VVRGYAMGGHLQHAENAFEAAAASGDAEPTMVKAMMRGCRRARDAQRAERWLRRALSMGLAPTASAWHLAVETAHEAGDAGAADALWRDAEAAGALSLYKAMWTFRGSNTLVVDVDQLSLLRHPLASALDLSGCDVGVASTAARAAARDLRRAPPPAVMYIYTGRSNPKQDEIAQAVTAIMRDDGARLSKEAGRGDIWKAEMSR*EPPG 1229
++ G P +FH VL+AL+ ++ + V++L+R+ PD+ AY YALR+ +A LL++M +AG+ D DT+ A L SR+ RAL++FAE EA + + V WN LL +V S P+ A+ K AEM RGL +A T + LL A+A L + A+V+++ + M A+G+ + A YR VV GYA GG +Q AE+A EA G P + A++R A D R WLRR + G P AW+ A++ AH+AGDA AADA W A+ A Y+ M RG V ++ + R ++ LDLS C +G A A A AR+LR P A Y Y G + + MRD G + S+ G +K+E +P G
Sbjct: 8 IRHGFYPQRALFHFVLQALTNNRSQAGQVRRVLALMRQPRIQPDAAAYNYALRS----QANAGFAGALLKDMLEAGVAPDRDTYMAMLRVCRMSRNMPRALEIFAEMEAANASFVDVQTWNMLLHAIVASGNPQSALQKVAEMTRRGLAPDAITCSLLLAAHAALGNRAEVDSIVSQMSASGMEV-APAYYRWVVEGYAQGGLMQRAEDALEAMLTRGTYHPHLAAALLRAHSNAADQPRVMYWLRRLSAAGHEPPPGAWNAAIDAAHKAGDADAADAAWCAAQPASGTQ-YREMRRRRGGVGWHVLHNRRAHSRDAASAVLDLSSCSIGWALAALCAEARELRNGSPSAFRYAYMGARRRPHAAVFDQIFEGMRDLGLQASEVPGATYFYKSEAPPRQPAG 403 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354203 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17617 ID=mRNA_17617|Name=jgi.p|Trimin1|354203|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1253bp|location=Sequence derived from alignment at Contig_217:170432..171684- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGGCGGTATTGGCTCTTCGTCAGATGATCGTCCAGCAAGGGCACCGGCCCback to top protein sequence of jgi.p|Trimin1|354203 >Trimin1|354203|estExt_Genemark1.C_Ctg_2170024 ID=Trimin1|354203|estExt_Genemark1.C_Ctg_2170024|Name=jgi.p|Trimin1|354203|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=398bp MIVQQGHRPDIRVFHIVLEALSAAKAMPAALNVMSLLRRSGTPPDSRAYTback to top mRNA from alignment at Contig_217:170432..171684- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17617 ID=mRNA_17617|Name=jgi.p|Trimin1|354203|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1253bp|location=Sequence derived from alignment at Contig_217:170432..171684- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_217:170432..171684- >mRNA_17617 ID=mRNA_17617|Name=jgi.p|Trimin1|354203|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1194bp|location=Sequence derived from alignment at Contig_217:170432..171684- (Tribonema minus UTEX_B_3156 )back to top |