mRNA_17500 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|49871
Unique NamemRNA_17500
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|49871 vs. uniprot
Match: A0A835YZH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH4_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 1.460e-149
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 2 
Query:   38 MKCAAAITVLATGVSAFAPPSGLAAPRACSSLKMAAATKSDLPVNLINPDFFWGEEGYRTYVATYKGDALVNRVYPVLDRVREKKLLTKTAELGLLGALEDAGLTLSQAEALLPAVEEAGLLSFAANNADFLLNTAAFLAVEPAELALPLVVGVVKGGPGLLNTVAAAAVLAEVGVAAATQSPVLAALAAVPLLGTAALANFGAGVLADLATAPKVVRAAPAAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRTRAAKKAVGNLSNLPKRRAAA 913
            MKCAAAITVLATGVSAFAPPSGLAAPRACSSLKMAAATKSDLPVNLINPDFFWGEEGYRTYVATYKGDALVNRVYPVLDRVREKKLLTKTAELGLLGALEDAGLTLSQAEALLPAVEEAGLLSFAANNADFLLNTAAFLAVEPAELALPLVVGVVKGGPGLLNTVAAAAVLAEVGVAAATQSPVLAALAAVPLLGTAALANFGAGVLADLATAPKVVRAAPAAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRTRAAKKAVGNLSNLPKRRAAA
Sbjct:    1 MKCAAAITVLATGVSAFAPPSGLAAPRACSSLKMAAATKSDLPVNLINPDFFWGEEGYRTYVATYKGDALVNRVYPVLDRVREKKLLTKTAELGLLGALEDAGLTLSQAEALLPAVEEAGLLSFAANNADFLLNTAAFLAVEPAELALPLVVGVVKGGPGLLNTVAAAAVLAEVGVAAATQSPVLAALAAVPLLGTAALANFGAGVLADLATAPKVVRAAPAAKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRTRAAKKAVGNLSNLPKRRAAA 292
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BLAST of jgi.p|Trimin1|49871 vs. uniprot
Match: A0A7S3Y3X5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3X5_HETAK)

HSP 1 Score: 118 bits (296), Expect = 1.980e-27
Identity = 82/162 (50.62%), Postives = 101/162 (62.35%), Query Frame = 2 
Query:  182 PDFFWGEEGYRTYVATYKGDALVNRVYPVLDRVREKKLLTKTAELGLLGALEDAGLTLSQAEALLPAVEEAGLLSFAANNADFLLNTAAFLAVEPAELALPLVVGVVKGGPGLLNTVAAAAVLAEVGVAAATQSPVLAALAAVPLLGTAALANFGAGVLADL 667
            P    GE  Y+   A +    L  R Y VL RV E KLL+ TA+ GLL ALE  GLTLS+ EALLP +E+ GLLS AANN D +L+ A  L +EPA L LP VVGVV+  PG+L   AA  V AE+G+A    S  L  +A +PLLG A + N  AG+L+DL
Sbjct:   60 PAALLGEVNYKNSAAEFNPSGLFGRKYDVLGRVAELKLLSVTADSGLLQALEAKGLTLSKIEALLPVLEKYGLLSTAANNLDLILSFAPLL-IEPAPLLLPAVVGVVEN-PGVLQLAAALLVAAELGIAVNVGSLPLDIVAGIPLLGGAFVLNTIAGILSDL 219
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BLAST of jgi.p|Trimin1|49871 vs. uniprot
Match: D8LDI8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI8_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 1.990e-27
Identity = 65/114 (57.02%), Postives = 78/114 (68.42%), Query Frame = 2 
Query:  191 FWGEEGYRTYVATYKGDALVNRVYPVLDRVREKKLLTKTAELGLLGALEDAGLTLSQAEALLPAVEEAGLLSFAANNADFLLNTAAFLAVEPAELALPLVVGVVKG--GPGLLN 526
            FWGEE YR +V  YK D L+N VYP++DRVR  K+LT T+E GLL  LEDAGLTLS+AE           LSFAA+N D L+N   F+A+EPA+LA+P VV VVK   G GLL 
Sbjct:   67 FWGEEDYRGFVDGYKADNLINGVYPIIDRVRATKILTTTSESGLLSELEDAGLTLSEAEKXXXXXXXXXXLSFAADNLDVLINLFGFIAIEPAKLAIPAVVSVVKALKGAGLLK 180
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BLAST of jgi.p|Trimin1|49871 vs. uniprot
Match: W7TPK4_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPK4_9STRA)

HSP 1 Score: 111 bits (277), Expect = 3.700e-24
Identity = 71/163 (43.56%), Postives = 97/163 (59.51%), Query Frame = 2 
Query:  182 PDFFWGEEGYRTYVATYKGDALV--NRVYPVLDRVREKKLLTKTAELGLLGALEDAGLTLSQAEALLPAVEEAGLLSFAANNADFLLNTAAFLAVEPAELALPLVVGVVKGGPGLLNTVAAAAVLAEVGVAAATQSPVLAALAAVPLLGTAALANFGAGVLAD 664
            P    GE  YR +VA+YK D ++     YP+  RV E KLL+ TAE GLL  LE+ GL LS  E LLP VEE  LLS A  N + +L T A +A+E A   LP++ GV++  P     VAAAA+ AE GV   + +P++  LA +PL+G AA++     +L+ 
Sbjct:   61 PSTILGEANYRKFVASYKPDGMIVGGARYPLFRRVSELKLLSLTAETGLLSRLEELGLRLSDLEKLLPLVEELELLSLAEKNQELILQTLAPIAIEQAPALLPILTGVLRTPPATFFAVAAAALAAEAGVVLVSGNPLIDVLAGIPLVGLAAVSAATGTILSS 223
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BLAST of jgi.p|Trimin1|49871 vs. uniprot
Match: F0YQP1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQP1_AURAN)

HSP 1 Score: 84.3 bits (207), Expect = 1.540e-14
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 2 
Query:  197 GEEGYRT-YVATYKGDALV--NRVYPVLDRVREKKLLTKTAELGLLGALEDAGLTLSQAEALLPAVEEAGLLSFAANNADFLLNTAAFLAVEPAELALPLVVGVVKGGPGLLNTVAAAAVLAEVG 562
            GE   +T +V +YK  A V   + YP+   +++KK+L+ TAE GLLGAL+D GLTLS  E LLP V+++G L  A NN    +    +L +EPA + +P++   +    G+   +AAA   AEVG
Sbjct:   52 GERRLKTEWVRSYKPTATVIEGKPYPLFQELQDKKILSATAESGLLGALDDLGLTLSDVEKLLPIVDKSGALGLAKNNLPLAIVATGYLLIEPAPVLIPVLGAALSVSSGVWTAIAAATTAAEVG 176
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BLAST of jgi.p|Trimin1|49871 vs. uniprot
Match: A0A7S3NM98_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NM98_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.260e-10
Identity = 42/106 (39.62%), Postives = 65/106 (61.32%), Query Frame = 2 
Query:  197 GEEGYRT-YVATYKGDA--LVNRVYPVLDRVREKKLLTKTAELGLLGALEDAGLTLSQAEALLPAVEEAGLLSFAANNADFLLNTAAFLAVEPAELALPLVVGVVK 505
            GE   +T ++ +YK  A  L  + YP+L  ++ K+LL+ T +  LL  LED GL+LS  E +LPA+E+AGLLS A+ N    +    +L VEPA   +P++  ++K
Sbjct:   56 GERRLKTEFIKSYKPTATLLEGKPYPLLQEIQNKRLLSATCKADLLTTLEDLGLSLSDIEKILPAIEKAGLLSSASKNLPLAIILTGYLLVEPAPFLIPILGNLLK 161
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BLAST of jgi.p|Trimin1|49871 vs. uniprot
Match: A0A7S2BDW8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDW8_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.460e-10
Identity = 45/99 (45.45%), Postives = 59/99 (59.60%), Query Frame = 2 
Query:  242 ALVNRVYPVLDRVREKKLLTKTAELGLLGALEDAGLTLSQAEALLPAVEEAGLLSFAANNADFLLNTAAFLAVEPAELALPLVVGVVKGGPGLLNTVAA 538
            +L+   YP+L+RV E  LLT+TAE G+L ALE+ GLTL Q EALLP +E+ G+L    N    L N    L +EPA L L  + G +K    L   +AA
Sbjct:   80 SLLTDDYPILERVGELSLLTRTAEAGILSALEEKGLTLGQLEALLPVIEKLGVLKLVQN--PILYNLVLPLLIEPAPLLLGPLSGAIKAPATLWTGIAA 176
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BLAST of jgi.p|Trimin1|49871 vs. uniprot
Match: A0A7S2FGP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FGP7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.010e-10
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 2 
Query:  242 ALVNRVYPVLDRVREKKLLTKTAELGLLGALEDAGLTLSQAEALLPAVEEAGLLSFAANNADFLLNTAAFLAVEPAELALPLVVGVVKGGPG 517
            +L+   YP+L+RV E  LLT+TAE G+L ALE+ GLTL Q EALLP +E+ G+L    N    L N    L +EPA    PL++G  +GG G
Sbjct:   80 SLLTDDYPILERVGELSLLTRTAEAGILSALEEKGLTLGQLEALLPVIEKLGVLKLVQN--PILYNLVLPLLIEPA----PLLLG--QGGSG 163
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|49871 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A835YZH4_9STRA1.460e-149100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y3X5_HETAK1.980e-2750.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LDI8_ECTSI1.990e-2757.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TPK4_9STRA3.700e-2443.56Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
F0YQP1_AURAN1.540e-1440.80Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S3NM98_9STRA1.260e-1039.62Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2BDW8_9STRA1.460e-1045.45Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2FGP7_9STRA2.010e-1047.83Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_253contigContig_253:68430..73084 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|49871|CE49870_283
Max annot lvl2836|Bacillariophyta
EggNOG OGs2E2D7@1|root,2S9M5@2759|Eukaryota,2XCSP@2836|Bacillariophyta
Evalue2.26e-18
Seed ortholog35128.Thaps1953
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-15_000420.1
TranscriptId50193
TrackFilteredModels1
ProteinId49871
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|49871gene_17500Tribonema minus UTEX_B_3156 geneContig_253 68430..73084 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|49871Trimin1|49871|CE49870_283Tribonema minus UTEX_B_3156 polypeptideContig_253 68617..73079 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17500_1exon_17500_1Tribonema minus UTEX_B_3156 exonContig_253 68430..68448 +
exon_17500_2exon_17500_2Tribonema minus UTEX_B_3156 exonContig_253 68599..68678 +
exon_17500_3exon_17500_3Tribonema minus UTEX_B_3156 exonContig_253 68935..69088 +
exon_17500_4exon_17500_4Tribonema minus UTEX_B_3156 exonContig_253 69391..69591 +
exon_17500_5exon_17500_5Tribonema minus UTEX_B_3156 exonContig_253 70931..71032 +
exon_17500_6exon_17500_6Tribonema minus UTEX_B_3156 exonContig_253 71607..71763 +
exon_17500_7exon_17500_7Tribonema minus UTEX_B_3156 exonContig_253 72341..72487 +
exon_17500_8exon_17500_8Tribonema minus UTEX_B_3156 exonContig_253 73024..73084 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_17500UTR5_17500Tribonema minus UTEX_B_3156 five_prime_UTRContig_253 68430..68448 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17500CDS_17500Tribonema minus UTEX_B_3156 CDSContig_253 68617..68678 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_17500UTR3_17500Tribonema minus UTEX_B_3156 three_prime_UTRContig_253 73080..73084 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17500 ID=mRNA_17500|Name=jgi.p|Trimin1|49871|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=921bp|location=Sequence derived from alignment at Contig_253:68430..73084+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTAGCAAGCTCCTCGCCAGGTACACATCCCCGCTACCATGAAGTGCGCAG
CTGCTATCACGGTGCTGGCCACCGGCGTCTCCGCCTTCGCGCCACCCAGC
GGCCTGGCCGCCCCCCGGGCCTGTTCCTCCTTGAAGATGGCTGCCGCTAC
CAAGTCTGACCTGCCAGTGAACCTCATCAACCCTGACTTCTTCTGGGGAG
AGGAGGGCTACAGGACATATGTCGCTACCTACAAGGGGGACGCACTGGTC
AACCGGGTGTACCCCGTACTGGACCGTGTGCGCGAGAAGAAGCTTCTCAC
CAAGACGGCGGAGCTGGGGCTTTTGGGCGCACTGGAGGACGCAGGTCTCA
CGCTGAGCCAGGCAGAGGCGCTGCTGCCAGCGGTTGAGGAGGCTGGGCTG
CTGTCATTCGCGGCGAACAACGCGGACTTCCTGCTGAACACTGCCGCGTT
CCTGGCCGTGGAGCCCGCAGAGCTGGCGTTGCCGCTGGTGGTGGGCGTCG
TCAAGGGCGGACCGGGCCTGCTCAACACCGTCGCCGCCGCAGCGGTCCTG
GCTGAGGTGGGCGTCGCGGCGGCCACGCAGAGCCCCGTGCTGGCGGCGCT
GGCCGCCGTCCCCCTGCTGGGCACTGCCGCGCTGGCCAACTTTGGCGCCG
GCGTGCTCGCGGACCTCGCCACTGCGCCCAAGGTCGTGCGCGCCGCGCCC
GCCGCCAAGTCCGCCCCCAAGGCAGCGGTGAAGGCCGGCAAGGCAGCGGT
GGCGGCGGCGCGCCCCAAGCTGGCGGCGGTGGCGGCAGCACCCAAGGTGG
TGGCGGCGAAGGTGGCAGCGGCAGCGCCCAAGGTTGCGGCGCCCTCCAGG
ACCAGGGCCGCCAAGAAGGCCGTCGGCAACCTGTCCAACCTCCCCAAGCG
CCGCGCGGCTGCATAGGCACC
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protein sequence of jgi.p|Trimin1|49871

>Trimin1|49871|CE49870_283 ID=Trimin1|49871|CE49870_283|Name=jgi.p|Trimin1|49871|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=293bp
MKCAAAITVLATGVSAFAPPSGLAAPRACSSLKMAAATKSDLPVNLINPD
FFWGEEGYRTYVATYKGDALVNRVYPVLDRVREKKLLTKTAELGLLGALE
DAGLTLSQAEALLPAVEEAGLLSFAANNADFLLNTAAFLAVEPAELALPL
VVGVVKGGPGLLNTVAAAAVLAEVGVAAATQSPVLAALAAVPLLGTAALA
NFGAGVLADLATAPKVVRAAPAAKSAPKAAVKAGKAAVAAARPKLAAVAA
APKVVAAKVAAAAPKVAAPSRTRAAKKAVGNLSNLPKRRAAA*
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mRNA from alignment at Contig_253:68430..73084+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17500 ID=mRNA_17500|Name=jgi.p|Trimin1|49871|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4655bp|location=Sequence derived from alignment at Contig_253:68430..73084+ (Tribonema minus UTEX_B_3156 )
CTAGCAAGCTCCTCGCCAGGTGAGCGGACGCGCGGCTGTGCAGGATGAGG
CAGATGCCGTTGCAAACCGCTGCAACGCGAGCTGCGCCCGGCAGCCCTTC
TTTCTCGATGAGTATAGTGCAGGAAGCACACTGACTGTTCTCGCTGCATA
TTTTTTCTCACCGACACAGGTACACATCCCCGCTACCATGAAGTGCGCAG
CTGCTATCACGGTGCTGGCCACCGGCGTCTCCGCCTTCGCGCCACCCAGG
TGAGCAGCGCCGCCACTGAAGCACCTTCCCCCAAACTTCTGGTTGATGCG
TCGTGTAGCAGGACCGATCCGCATGCATACACGATAAGCGCGCTGCCTGA
ACAGCGCGCTGGACACACGCATGTGCACCGTTTTGAAAAACTCAGCGCAC
AGCGCTGCCGCTGCATGTCTGGTCGGTCGGTGGCATGTCTGTGTCTGTCG
CTCTTGTCGATTGCAGCGCTGACTGACCTACGCCCGCGTGCATGTTGTGC
TGCAGCGGCCTGGCCGCCCCCCGGGCCTGTTCCTCCTTGAAGATGGCTGC
CGCTACCAAGTCTGACCTGCCAGTGAACCTCATCAACCCTGACTTCTTCT
GGGGAGAGGAGGGCTACAGGACATATGTCGCTACCTACAAGGGGGACGCA
CTGGTCAACGTGAGGGATCCGCAACGCGTGCATTGCGGCTGTGCACGCAT
CGCAGCAGCGCATCAAAGAGTGCACGCAGGTTTCCAAGTAGGCCTCAATA
CGCATGTCAATGTGTGCGGGCATGCTACCGGGGCCAGAGTGACAACGCTG
TCGCTGCGCACCCGCCGATAAGCCTGGTATGTACTGTCTCAAATCTCTTC
GTCGGCTTCTTCAGCTGTGGCAAGCTTGTGCTACTGGTAGGCTGGCATCT
CTACCACCTCCCTCTTTGAGCCTGCTTCTCTTCCTGCCCCCCCTTGTCTC
CCGCGGTGCAGCGGGTGTACCCCGTACTGGACCGTGTGCGCGAGAAGAAG
CTTCTCACCAAGACGGCGGAGCTGGGGCTTTTGGGCGCACTGGAGGACGC
AGGTCTCACGCTGAGCCAGGCAGAGGCGCTGCTGCCAGCGGTTGAGGAGG
CTGGGCTGCTGTCATTCGCGGCGAACAACGCGGACTTCCTGCTGAACACT
GCCGCGTTCCTGGTGAGTGCAGCAGCCGTGTCCTGGCAAGCGTAAGCGGC
GCGTGCGCATTTTTGCGAGGGCTGGAAGGCGTGTGTCGGAATGGCATGCA
AGCAGGGCGCACTCCATGTGAATGGATCACATTCTTGACTGCAAGGTTGA
ACTTCTTCGGCAGCGACTCTGTGCGTGCCAGCTGATATGTCCATGTCAAA
GTTGGCCGCGGCCGTACAGCCCGTCGCTCATGCTGGACAGCCAGGCCAGC
CGATACGCAGCGCGTGTAGACGTAATGGGCCACGGTGCGACTTGAACGTG
ACCAAGCTCAAGTTGTGAAGTTGCATGTTTACGTAACAGACTCTTCAATG
CAGTGACGCGCCAGAATATGATAGGCTTGAGCTTTCTTGCACCCAAGCAT
GCATGCTGTCCTCCTTCCAACTAAAGATCCTATGTGAGCCGCATCATGAT
TCTGGCTCTTGGGATGTCGTGAGCTGTGTCATATTGTGCCATTGGGCGCT
TGGATCCTATATTCGTTGTCGGCTCTGGAAGAAGGCCCACAGTGGACTTT
ATTTGAAGTTAAAGTTGCAGCAGCATTCGCAGAGGCAACTGCGCTGGGGC
AAGACGCTGATGACAGCTGCGACCATGTGCACCACTGAGCAAGTGGGGAG
TCAGAGGGGACCCTGCATAACAGCAGTTGCAGGCATCTGTTTCACTCGCC
GCTTTATAGCGCCGACACATGACCACCACTGTCTACAGTAGTCGAGCGGC
TCACTGCAGAGGAGTAAGAGGGTGATGGGTGCACCGCTGAGTCTGGCAAG
GAGCTCCACGCAGTGCCGCCTTTCTCAGCGGCACGTCTGATTTATCCTAG
ATATGTGCGTGCCAGTGCTGTCACTGAGTAGTCGCTGAGAGGAGATCTAC
ATGCATGGCTCAGCCTTGAGAGCGCCATAGTTCTGAGGATATTGACTTCA
AACCTCAACTTCAAAACGGCGCCGCAGCGCAATCTCTCATCTCTGTTGTC
GTGAGTGAAGGGGCGAGCATGGGTGTCTGCGTCGCCCATTTCCCAGTGCG
AGAAGCCAAGCGTCAAAGCAGGGTTAGCGTGCCTCAGTGCCTGTGTCGGC
AGATGAGTTGCTCACTGTCACGCCAGACTCTTTGCACGTCCTACGCGTCC
AGCTGCAGGCCCAGTGACTGTCTACAATTGCTGTGAGTACGCCGCGTGGT
GGCACCATGTGCATCTAATCTGTACAAAGCGGGCCATAGACGGATCATCA
GCTCAAGATCGTGGTGGCTGAACTTCAAGTATTATGGTCACCTGGAGTCA
TCGGTGACGCTCCACTCACCCCCTCCCTGCATGCGCTCTACTCACGCTCA
GGCCGTGGAGCCCGCAGAGCTGGCGTTGCCGCTGGTGGTGGGCGTCGTCA
AGGGCGGACCGGGCCTGCTCAACACCGTCGCCGCCGCAGCGGTCCTGGCT
GAGGTATGCACGTACGCCTTGTTGTCGCGAGCCTTGTAGTGGTGCCAAAG
TGAGTTGTGCGGAGGCGGGTCGCGCGCGCGCTCGACGGTCACCCGCTGCG
CGCTGCGTGCGGGGCGCTCGTCACTGGCATCGCGTCGGCGCAAGGCATGT
CGGAGGAAACCTGCCGCCGTTCGCAAGAAGCGTCGTTTCGCATGGCACTC
TCGCCGCGGCGCGCAACTGCAGGCGCCCGGCTCGCAATCGCCGCAGCGCC
GCTACAGCGCTGCGAGATGTGCACGCGCGCAATTGCGCTGGTCACCCCCC
CTCTGCCGCATCTCCCGGCGCCACCGCGACTCACACTCCAATGCTCACTC
GCCTGCTCGCCTGCACACTCCGCGACGGCGTGTGCCGCCAGGCGGGCGTC
GCGCCGGCCGCGCAGCGCCCCGCCAGCCCCTCTTCAAGCGGGCAACTGCC
CTCTTATTACAGCCGGCACCCACGCCTGCGCATCGCCGCGAAGCGCACTC
ACTCGCTCACACACTCAACTACTCACTCACGCACTCACTCACAAACTCCG
CAATGGCGCTGTTGTTGCCGTTGCCAGGTGGGCGTCGCGGCGGCCACGCA
GAGCCCCGTGCTGGCGGCGCTGGCCGCCGTCCCCCTGCTGGGCACTGCCG
CGCTGGCCAACTTTGGCGCCGGCGTGCTCGCGGACCTCGCCACTGCGCCC
AAGGTCGTGCGCGCCGCGCCCGCCGCCAAGTCCGGTGAGACCTGTTGAAA
TGATTGATGTGGTGTCGTGCAAAGCCTGATGCGATCTTACTACTCAAACT
GGTTCCCCCCTGTGAGCTGCGGGGATGGATGGCCGCTCTCGGGTATAGCG
CTTTCCGCGCGTTTCGTGGCTCACCCGGTGAGATGGGCTGCGTTGGTGAA
AGATGTGCAGTGCGAGGAGCATGTGCCAGAGCGAAGCGGTGGTGGTGCGA
TTAGCTGAAGCAGCACTCCGGTCGAGCTGTTGTGGGTTGTACGAAGCTTG
CATGACCTAGCCAGTCCCTGCTGTCGCGGCTGCCATGTAGCTGCAAAGGC
CAGGAAGGCAGCAAGGTGGCCTGTGCAATCAGAGACTGCTGCTTCAGCAC
ATGCCTTCCTTCGCCGACGAGAAAATCGACAGTAGCGGCCGCAACGTCAA
CTTGGCCATCAGCTCCAGATGGACGCAAAACCGCGAAGTGTGAAACCGTC
ACAGCAGCTGTGTGCAGAACTGCACATGGACAGCACAGAGACTGATCATG
TGCATCGACGATCAATACCACAGAGACTGACTAGGTACACTGCCAATCTC
TTATGCCGCAGCCCCCAAGGCAGCGGTGAAGGCCGGCAAGGCAGCGGTGG
CGGCGGCGCGCCCCAAGCTGGCGGCGGTGGCGGCAGCACCCAAGGTGGTG
GCGGCGAAGGTGGCAGCGGCAGCGCCCAAGGTTGCGGCGCCCTCCAGGAC
CAGGGCCGGTGAGTCACATTTGAAGTAGTGGACTTGAAGTACACGTATGA
GCGCACTCACCAGGTGACACGTTGAGGTTGGCCCACCCAGGGCTGGTGAG
TCACTGGATGAATTTGCTATGGCGTCATGTATGGAGCCCCTGCCTTCTTC
AGACATTCAAGACAGCCCAGTGAGGGGGGGGCTGTTGAAGTTTGGTGCAT
GCAACATGCAGCAAGAGTGGGTCGAGTGTGCTTTGATGTTTTTGGCTTTG
AGCCATCGGGGCACATGCGACCTCTAAACCTAGGGGGCGAGTCAAATCGC
ATTGCCCGCATCGCAGCAGCAACGCGCTTGCATTCAAGCCACGCACCACT
GCTCCTTGCTTCGATGGCCTGCGCGCCTATGGCTCAGCCAGCCCTGCCGC
CACCGACTCGGCGCATTTGGCTGCAGGCTGAGTTACGCCACAGATGCGCT
TCGCCCTGCCAGTGTTGCCGGCTGCAATGCAATGGCCGTGACGTCTGTCT
AACGAGCTCGCCGCTTCCTCCTCCCTCTGATCTCGCTGCTGCAGCCAAGA
AGGCCGTCGGCAACCTGTCCAACCTCCCCAAGCGCCGCGCGGCTGCATAG
GCACC
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Coding sequence (CDS) from alignment at Contig_253:68430..73084+

>mRNA_17500 ID=mRNA_17500|Name=jgi.p|Trimin1|49871|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=879bp|location=Sequence derived from alignment at Contig_253:68430..73084+ (Tribonema minus UTEX_B_3156 )
ATGAAGTGCGCAGCTGCTATCACGGTGCTGGCCACCGGCGTCTCCGCCTT
CGCGCCACCCAGCGGCCTGGCCGCCCCCCGGGCCTGTTCCTCCTTGAAGA
TGGCTGCCGCTACCAAGTCTGACCTGCCAGTGAACCTCATCAACCCTGAC
TTCTTCTGGGGAGAGGAGGGCTACAGGACATATGTCGCTACCTACAAGGG
GGACGCACTGGTCAACCGGGTGTACCCCGTACTGGACCGTGTGCGCGAGA
AGAAGCTTCTCACCAAGACGGCGGAGCTGGGGCTTTTGGGCGCACTGGAG
GACGCAGGTCTCACGCTGAGCCAGGCAGAGGCGCTGCTGCCAGCGGTTGA
GGAGGCTGGGCTGCTGTCATTCGCGGCGAACAACGCGGACTTCCTGCTGA
ACACTGCCGCGTTCCTGGCCGTGGAGCCCGCAGAGCTGGCGTTGCCGCTG
GTGGTGGGCGTCGTCAAGGGCGGACCGGGCCTGCTCAACACCGTCGCCGC
CGCAGCGGTCCTGGCTGAGGTGGGCGTCGCGGCGGCCACGCAGAGCCCCG
TGCTGGCGGCGCTGGCCGCCGTCCCCCTGCTGGGCACTGCCGCGCTGGCC
AACTTTGGCGCCGGCGTGCTCGCGGACCTCGCCACTGCGCCCAAGGTCGT
GCGCGCCGCGCCCGCCGCCAAGTCCGCCCCCAAGGCAGCGGTGAAGGCCG
GCAAGGCAGCGGTGGCGGCGGCGCGCCCCAAGCTGGCGGCGGTGGCGGCA
GCACCCAAGGTGGTGGCGGCGAAGGTGGCAGCGGCAGCGCCCAAGGTTGC
GGCGCCCTCCAGGACCAGGGCCGCCAAGAAGGCCGTCGGCAACCTGTCCA
ACCTCCCCAAGCGCCGCGCGGCTGCATAG
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