mRNA_17377 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|354462
Unique Name	mRNA_17377
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|354462 vs. uniprot
Match: A0A836CG46_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG46_9STRA)

HSP 1 Score: 806 bits (2082), Expect = 1.870e-293
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 1

Query:    1 MEVAPAAPTHVRRTDAEEQQWLGLEAYVADLDRHLVVDREGRQYMQETDAAGASNDDLVSEADPIYVASDEDVDGPRVTSLLQLNIGGPTVETVRKGLRTGYVYTGSLNPEAFKRLGAVYKRLKEAKGIIGPVPTQMSEDETKIDSSVTFDLASNTLVGFCGDEGDGHTCSLDGVRDPIHNGKKLMNPLDSATRVLAMGDYMAHMSHVKAVFDQLPFAQHGLRANDVIWNYVSVFFSSSWTLAERAEAASFVLHFLRLWRSWLLRAERLTLKANFISRECYEDITISVHNVILIIRSGPGSASDSGXXXXXXXXXXETDHPHTLGAKALAAIQPSDEELSDHPGLATHTFDVVEDDLGVEQEVIVGGISRDSDNARSELRAVVDTLITEAISDAPTEGEPAMVTIECEGGPGPSSSRTGA 1260
            MEVAPAAPTHVRRTDAEEQQWLGLEAYVADLDRHLVVDREGRQYMQETDAAGASNDDLVSEADPIYVASDEDVDGPRVTSLLQLNIGGPTVETVRKGLRTGYVYTGSLNPEAFKRLGAVYKRLKEAKGIIGPVPTQMSEDETKIDSSVTFDLASNTLVGFCGDEGDGHTCSLDGVRDPIHNGKKLMNPLDSATRVLAMGDYMAHMSHVKAVFDQLPFAQHGLRANDVIWNYVSVFFSSSWTLAERAEAASFVLHFLRLWRSWLLRAERLTLKANFISRECYEDITISVHNVILIIRSGPGSASDSGXXXXXXXXXXETDHPHTLGAKALAAIQPSDEELSDHPGLATHTFDVVEDDLGVEQEVIVGGISRDSDNARSELRAVVDTLITEAISDAPTEGEPAMVTIECEGGPGPSSSRTGA
Sbjct:    1 MEVAPAAPTHVRRTDAEEQQWLGLEAYVADLDRHLVVDREGRQYMQETDAAGASNDDLVSEADPIYVASDEDVDGPRVTSLLQLNIGGPTVETVRKGLRTGYVYTGSLNPEAFKRLGAVYKRLKEAKGIIGPVPTQMSEDETKIDSSVTFDLASNTLVGFCGDEGDGHTCSLDGVRDPIHNGKKLMNPLDSATRVLAMGDYMAHMSHVKAVFDQLPFAQHGLRANDVIWNYVSVFFSSSWTLAERAEAASFVLHFLRLWRSWLLRAERLTLKANFISRECYEDITISVHNVILIIRSGPGSASDSGXXXXXXXXXXETDHPHTLGAKALAAIQPSDEELSDHPGLATHTFDVVEDDLGVEQEVIVGGISRDSDNARSELRAVVDTLITEAISDAPTEGEPAMVTIECEGGPGPSSSRTGA 420

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BLAST of jgi.p|Trimin1|354462 vs. uniprot
Match: A0A836CBT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT4_9STRA)

HSP 1 Score: 178 bits (452), Expect = 7.700e-45
Identity = 142/404 (35.15%), Postives = 160/404 (39.60%), Query Frame = 1

Query:  634 FDQLPFA-QHGLRANDVIWNYVSVFFSSSWTLAERAEAASFVLHFLRLWRSWLLRAERLTLKANFISRECYEDITISVHNVILIIR-------------------------------------------------------------------------------------------SGPGSASD---------------------------------------------------------------------------------------------------------SGXXXXXXXXXXETDHPHTLGAKALAAIQPSDEELSDHPGLATHTFDVVEDDLGVEQEVIVGGISRDSDNARSELRAVVDTLITEAISDAPTEGEPAMVTIECEGGPGPSSSRT 1254
            FD+L    Q  L+A+  +    +   SSSWTLAERAEAAS+VLHFLR+WRSWLLRAERLTLKANFISRECYEDITISVHNVILIIR                                                                                            GP +A+D                                                                                                                  X  E DH HTL AKAL   QPSD +L D PG+ATHTF V+EDD GV QEVI+GG SRDSDNARSELRA+VDTLITE ISDAP+EG PAMVTI+ +GG G + S T
Sbjct:  353 FDELSICNQRNLKASGRLEQTAA---SSSWTLAERAEAASYVLHFLRVWRSWLLRAERLTLKANFISRECYEDITISVHNVILIIRFFRDFTPGLPCALTQDGSDCCEKVFSELCGSGASSTMQRIYTHYDALRAVPKYWHVEEQMCSPDALLKKRRHEKLCDVWHKDVMPGDDIRADGPPAAADLSVYPSDAELTLQWTLGQQRAMRFAWNVGIRPPSLEHLLSPPPDFPTALPSAFAEADQWYIEPWAEEETALLHMRTADHDDQGHEAPMDTIPADPHRVEGHAPPWRSESDTDDDXGDEADHQHTLSAKALTGCQPSDVDLHDDPGMATHTFSVIEDDFGVAQEVIIGGASRDSDNARSELRAIVDTLITENISDAPSEGGPAMVTIKNDGGGGSAGSST 753

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BLAST of jgi.p|Trimin1|354462 vs. uniprot
Match: A0A835ZB02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB02_9STRA)

HSP 1 Score: 126 bits (317), Expect = 6.150e-29
Identity = 66/82 (80.49%), Postives = 73/82 (89.02%), Query Frame = 1

Query:  979 KALAAIQPSDEELSDHPGLATHTFDVVEDDLGVEQEVIVGGISRDSDNARSELRAVVDTLITEAISDAPTEGEPAMVTIECE 1224
            +ALAAIQPSDEEL+DH G ATHTFDVVEDDL VEQ V+VGG SRDS NARS+LRA+VDTLITEAISDAPTE  PAMVT+E +
Sbjct:  165 QALAAIQPSDEELNDHLGTATHTFDVVEDDLVVEQGVMVGGTSRDSHNARSDLRAIVDTLITEAISDAPTEKGPAMVTVEVD 246

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BLAST of jgi.p|Trimin1|354462 vs. uniprot
Match: A0A835YIR8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR8_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 5.920e-19
Identity = 41/52 (78.85%), Postives = 49/52 (94.23%), Query Frame = 1

Query:  526 RDPIHNGKKLMNPLDSATRVLAMGDYMAHMSHVKAVFDQLPFAQHGLRANDV 681
            +DPIHNG++LMNPLDSATRVLA+GDYMAHMS V+AV + LPFA+HGLRAND+
Sbjct:    4 QDPIHNGEELMNPLDSATRVLALGDYMAHMSDVRAVIEALPFAEHGLRANDI 55

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BLAST of jgi.p|Trimin1|354462 vs. uniprot
Match: A0A8B6GN09_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GN09_MYTGA)

HSP 1 Score: 85.9 bits (211), Expect = 4.220e-14
Identity = 57/172 (33.14%), Postives = 80/172 (46.51%), Query Frame = 1

Query:  520 GVRDPIHNGKKLMNPLDSATRVLAMG-DYMAHMSHVKAVFDQLPFAQHGL-----------------------RAND--------------------------VIWNYVSVFFSSSWTLAERAEAASFVLHFLRLWRSWLLRAERLTLKANFISRECYEDITISVHNVILII 885
            G +D IHN KK++N LD  +R+L +G D + HM+ ++ V    P   HGL                       R  D                          V+  YV +FFS   +LAER   A FV HFL +WR+++   + LTL +NF+SRE Y DI ISVH  +++I
Sbjct:  410 GDQDVIHNHKKIINHLDHTSRMLHIGPDLLVHMNQIELVMRSFPVLVHGLTRDHVRRDRDRQNWKVAQELSFQRVQDCLNDLINGSDDRAPIPSVKGTKAFLYVVHQYVDIFFSPKASLAERISLAGFVTHFLGIWRNYVYLNQALTLTSNFLSRETYCDILISVHFAVMLI 581

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BLAST of jgi.p|Trimin1|354462 vs. uniprot
Match: A0A8B6HBV0_MYTGA (Uncharacterized protein n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6HBV0_MYTGA)

HSP 1 Score: 85.9 bits (211), Expect = 4.430e-14
Identity = 57/172 (33.14%), Postives = 80/172 (46.51%), Query Frame = 1

Query:  520 GVRDPIHNGKKLMNPLDSATRVLAMG-DYMAHMSHVKAVFDQLPFAQHGL-----------------------RAND--------------------------VIWNYVSVFFSSSWTLAERAEAASFVLHFLRLWRSWLLRAERLTLKANFISRECYEDITISVHNVILII 885
            G +D IHN KK++N LD  +R+L +G D + HM+ ++ V    P   HGL                       R  D                          V+  YV +FFS   +LAER   A FV HFL +WR+++   + LTL +NF+SRE Y DI ISVH  +++I
Sbjct:  204 GDQDVIHNHKKIINHLDHTSRMLHIGPDLLVHMNQIELVMRSFPVLVHGLTRDHVRRDRDRQNWKVAQELSFPRVQDCLNDLINGSDDRAPIPSVKGTKAFLYVVHQYVDIFFSPKASLAERISLAGFVTHFLGIWRNYVYLNQALTLTSNFLSRETYCDILISVHFAVMLI 375

[Close]

BLAST of jgi.p|Trimin1|354462 vs. uniprot
Match: A0A8B6BKS9_MYTGA (Uncharacterized protein (Fragment) n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6BKS9_MYTGA)

HSP 1 Score: 85.5 bits (210), Expect = 4.850e-14
Identity = 57/172 (33.14%), Postives = 80/172 (46.51%), Query Frame = 1

Query:  520 GVRDPIHNGKKLMNPLDSATRVLAMG-DYMAHMSHVKAVFDQLPFAQHGL-----------------------RAND--------------------------VIWNYVSVFFSSSWTLAERAEAASFVLHFLRLWRSWLLRAERLTLKANFISRECYEDITISVHNVILII 885
            G +D IHN KK++N LD  +R+L +G D + HM+ ++ V    P   HGL                       R  D                          V+  YV +FFS   +LAER   A FV HFL +WR+++   + LTL +NF+SRE Y DI ISVH  +++I
Sbjct:  148 GDQDVIHNHKKIINHLDHTSRMLHIGPDLLVHMNQIELVMRSFPVLVHGLTRDHVRRDRDRQNWKVAQELSFQRVQDCLNDLINGSDDRAPIPSVKGTKAFLYVVHQYVDIFFSPKASLAERISLAGFVTHFLGIWRNYVYLNQALTLTSNFLSRETYCDIFISVHFAVMLI 319

[Close]

BLAST of jgi.p|Trimin1|354462 vs. uniprot
Match: A0A8B6HAZ4_MYTGA (Uncharacterized protein n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6HAZ4_MYTGA)

HSP 1 Score: 85.9 bits (211), Expect = 5.240e-14
Identity = 57/172 (33.14%), Postives = 80/172 (46.51%), Query Frame = 1

Query:  520 GVRDPIHNGKKLMNPLDSATRVLAMG-DYMAHMSHVKAVFDQLPFAQHGL-----------------------RAND--------------------------VIWNYVSVFFSSSWTLAERAEAASFVLHFLRLWRSWLLRAERLTLKANFISRECYEDITISVHNVILII 885
            G +D IHN KK++N LD  +R+L +G D + HM+ ++ V    P   HGL                       R  D                          V+  YV +FFS   +LAER   A FV HFL +WR+++   + LTL +NF+SRE Y DI ISVH  +++I
Sbjct:  204 GDQDVIHNHKKIINHLDHTSRMLHIGPDLLVHMNQIELVMRSFPVLVHGLTRDHVRRDRDRQNWKVAQELSFPRVQDCLNDLINGSDDRAPIPSVKGTKAFLYVVHQYVDIFFSPKASLAERISLAGFVTHFLGIWRNYVYLNQALTLTSNFLSRETYCDILISVHFAVMLI 375

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354462 vs. uniprot

BLAST of jgi.p|Trimin1|354462 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8


Match Name	E-value	Identity	Description
A0A836CG46_9STRA	1.870e-293	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CBT4_9STRA	7.700e-45	35.15	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZB02_9STRA	6.150e-29	80.49	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YIR8_9STRA	5.920e-19	78.85	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A8B6GN09_MYTGA	4.220e-14	33.14	Uncharacterized protein n=1 Tax=Mytilus galloprovi...	[more]
A0A8B6HBV0_MYTGA	4.430e-14	33.14	Uncharacterized protein n=2 Tax=Mytilus galloprovi...	[more]
A0A8B6BKS9_MYTGA	4.850e-14	33.14	Uncharacterized protein (Fragment) n=2 Tax=Mytilus...	[more]
A0A8B6HAZ4_MYTGA	5.240e-14	33.14	Uncharacterized protein n=2 Tax=Mytilus galloprovi...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_252	contig	Contig_252:82174..90511 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|354462\|estExt_Genemark1.C_Ctg_2520024
Max annot lvl	33208\|Metazoa
EggNOG OGs	28N4N@1\|root,2QUPU@2759\|Eukaryota,39SZC@33154\|Opisthokonta,3BNE8@33208\|Metazoa
Evalue	2.08e-05
Seed ortholog	400682.PAC_15718561
Hectar predicted targeting category	other localisation
TranscriptId	354784
Track	FilteredModels1
ProteinId	354462

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354462	gene_17377	Tribonema minus UTEX_B_3156	gene	Contig_252 82174..90511 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354462	Trimin1\|354462\|estExt_Genemark1.C_Ctg_2520024	Tribonema minus UTEX_B_3156	polypeptide	Contig_252 82329..90511 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17377_9	exon_17377_9	Tribonema minus UTEX_B_3156	exon	Contig_252 82174..82342 -
exon_17377_8	exon_17377_8	Tribonema minus UTEX_B_3156	exon	Contig_252 83020..83347 -
exon_17377_7	exon_17377_7	Tribonema minus UTEX_B_3156	exon	Contig_252 83817..83850 -
exon_17377_6	exon_17377_6	Tribonema minus UTEX_B_3156	exon	Contig_252 85569..85777 -
exon_17377_5	exon_17377_5	Tribonema minus UTEX_B_3156	exon	Contig_252 86337..86486 -
exon_17377_4	exon_17377_4	Tribonema minus UTEX_B_3156	exon	Contig_252 87500..87724 -
exon_17377_3	exon_17377_3	Tribonema minus UTEX_B_3156	exon	Contig_252 87835..87914 -
exon_17377_2	exon_17377_2	Tribonema minus UTEX_B_3156	exon	Contig_252 89075..89168 -
exon_17377_1	exon_17377_1	Tribonema minus UTEX_B_3156	exon	Contig_252 90383..90511 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_17377	UTR3_17377	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_252 82174..82328 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17377	CDS_17377	Tribonema minus UTEX_B_3156	CDS	Contig_252 90383..90511 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_252:82174..90511-
coding sequence from alignment at Contig_252:82174..90511-

spliced messenger RNA

>mRNA_17377 ID=mRNA_17377|Name=jgi.p|Trimin1|354462|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1418bp|location=Sequence derived from alignment at Contig_252:82174..90511- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGGTAGCGCCCGCTGCGCCCACTCATGTACGGCGCACTGATGCAGA
GGAGCAGCAATGGCTTGGCTTGGAGGCGTATGTGGCAGACTTAGATCGGC
ACCTGGTGGTGGATAGGGAAGGGCGACAGTACATGCAGGAGACTGACGCT
GCCGGAGCTTCCAACGACGACCTTGTCTCGGAGGCAGATCCCATTTATGT
GGCGTCTGATGAGGATGTTGACGGGCCCAGGGTCACGTCGCTTCTGCAGC
TCAACATCGGTGGGCCAACTGTGGAGACTGTCCGCAAGGGCCTTCGCACT
GGCTATGTCTACACAGGGTCCTTGAACCCGGAAGCGTTCAAGCGCTTGGG
AGCAGTGTACAAGCGCCTGAAGGAGGCGAAGGGCATAATTGGGCCTGTGC
CTACGCAAATGTCAGAGGACGAGACGAAGATCGACTCTTCCGTCACATTT
GACCTAGCTTCAAACACCCTGGTGGGCTTCTGCGGCGACGAAGGCGACGG
CCACACCTGCAGCTTGGATGGTGTCCGCGACCCAATCCACAACGGGAAGA
AGCTGATGAACCCCTTGGACTCTGCAACGCGGGTGCTGGCGATGGGTGAT
TACATGGCACACATGAGCCACGTTAAGGCCGTGTTTGACCAGCTCCCATT
TGCGCAGCACGGGCTCCGTGCGAACGACGTGATCTGGAACTACGTGTCGG
TGTTCTTCAGCAGCAGCTGGACGTTGGCTGAGAGAGCCGAAGCAGCATCA
TTTGTGCTGCACTTCTTGCGGTTGTGGCGCTCTTGGCTGCTACGCGCGGA
GCGGCTCACCTTGAAAGCGAACTTCATCAGCAGGGAGTGCTATGAGGACA
TCACCATCTCTGTGCACAACGTCATCCTCATCATCAGAAGCGGGCCGGGG
TCAGCCAGCGACAGCGGCGAGTCTGACACAGACGATGACGATGGAGATGA
AACGGATCATCCTCACACATTGGGAGCCAAGGCGTTGGCTGCCATTCAGC
CTAGTGATGAGGAGCTCAGTGATCATCCAGGGCTGGCGACTCACACATTT
GATGTGGTTGAGGATGACTTGGGGGTGGAGCAGGAGGTGATTGTTGGCGG
CATAAGCCGCGACAGCGACAACGCACGCAGCGAGTTGCGCGCCGTTGTGG
ACACGCTCATCACAGAGGCCATTAGTGATGCGCCCACGGAAGGCGAGCCT
GCGATGGTCACCATCGAGTGCGAGGGGGGGCCGGGGCCTTCGAGCAGCCG
CACTGGAGCGTGAGCGACGCATGCTGGGTCTGCAAGGCGATTTTGCAATG
ATATTCGAAAACAGCTCGGAGAACCGCAACAGCCAACAGCCATACCATTT
TTGGCTTGGCAAGGTGCAGCGTTTGATCAAGCTTGCAGGTCGTCGTAGAG
TCGAGTACAGAGAGCCAG

protein sequence of jgi.p|Trimin1|354462

>Trimin1|354462|estExt_Genemark1.C_Ctg_2520024 ID=Trimin1|354462|estExt_Genemark1.C_Ctg_2520024|Name=jgi.p|Trimin1|354462|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=421bp
MEVAPAAPTHVRRTDAEEQQWLGLEAYVADLDRHLVVDREGRQYMQETDA
AGASNDDLVSEADPIYVASDEDVDGPRVTSLLQLNIGGPTVETVRKGLRT
GYVYTGSLNPEAFKRLGAVYKRLKEAKGIIGPVPTQMSEDETKIDSSVTF
DLASNTLVGFCGDEGDGHTCSLDGVRDPIHNGKKLMNPLDSATRVLAMGD
YMAHMSHVKAVFDQLPFAQHGLRANDVIWNYVSVFFSSSWTLAERAEAAS
FVLHFLRLWRSWLLRAERLTLKANFISRECYEDITISVHNVILIIRSGPG
SASDSGESDTDDDDGDETDHPHTLGAKALAAIQPSDEELSDHPGLATHTF
DVVEDDLGVEQEVIVGGISRDSDNARSELRAVVDTLITEAISDAPTEGEP
AMVTIECEGGPGPSSSRTGA*

mRNA from alignment at Contig_252:82174..90511-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17377 ID=mRNA_17377|Name=jgi.p|Trimin1|354462|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8338bp|location=Sequence derived from alignment at Contig_252:82174..90511- (Tribonema minus UTEX_B_3156 )
ATGGAGGTAGCGCCCGCTGCGCCCACTCATGTACGGCGCACTGATGCAGA
GGAGCAGCAATGGCTTGGCTTGGAGGCGTATGTGGCAGACTTAGATCGGC
ACCTGGTGGTGGATAGGGAAGGGCGACAGGTGCGGTGCCCCAGCTGCATC
AGGGACAGAGCATGCGGCTTTGATGGCTTTTGCTTGGCTCTGCCGGCACT
CATGGATGAGTGCCTAGACGCAAAGCAGCGTTGCAAGGAGCACGTCCGGA
GTGAGAGACACCAGCAGCACGTTGCAAGTGGCCTGAGGCAGGCGCAGCTG
CCCTTCAAAGCAGCAGCAGCTGATGACACTGGGCTAGCTGTGAGCAGGTG
ACAATGCAGATGCGGTGCCCCTATGACCACTCGCAGCGGCATTGTTGATG
GTGGCATTGCATATGCCAGCCACATGATACTAGTGCGATTGCTTGTTCTA
CAGCTGCATATACATGCATGATGCATGCCACTGCTGATGAGTATAAGAGG
CGCATTTTGCTTGTTGCCCACTCTATTGCAAGCGCTTGCACTTGCTGAGC
GATCACAGTCAATGGTGCTCATAGAACCACGTACCCTGCCACTTAGCCAA
ATCACATGTGATTTGATGCATGCATGGCAGGGAGCGTGGACTGAGGCAAC
TGTGCTTCGGCTGGTACAGGCAGAAACATTTTTACGCCAGCAAGGAGTAC
AGCGTGCAGCCACTGAAGGACAGCGGACTAGCAGGAGCAGAGTGGTACAT
CGATCCGGTGGAGGAGCCAGGCAAGTAGCACCTCATAGGCACGACATTGC
ATATTGTAGCGACTGTCGCTTTATGTGTGGAATACCGTGGAGCCACAGAG
GCCCAGCTATAGCTGTAGTGTACACCCAAATTGAATCCGATGCACGCCAC
CGACAGAATGTATGCAGTTTCAACGACAGTCGCCCACTGCATGCTTACTG
ATCACTTGGTTTGGCAATTTGAGACTCGGTATACTTAGCACACAGCGGTG
CATATGCGGGTCATGTCAGTATCTGAACTGCACAACAGCCCAACAAAACC
CTCATTTCACATTTCACACATGCAAGCATACGTACACTATAGGATATGAG
GGATGTGCCATGCATATACTTTATGTATGCTTACAACCAGATGTGATGTA
TGCTCTTTACATCATGAAATATGGCCGTTTGGCCATTGTGGCACATTGTG
AGCAGCACACGGCATACACTATGTACGTCGCTGTTCGCATTAAAACATAT
TATGGGGGTTGTACGTGTGCGCTTAGTATGTGCTTTCTCATTGTATGCTT
ACTGTTGGCCGTTGTATCTGCAGCGCCAGCTTTTCTTCTGCAGTACATGC
AGGAGACTGACGCTGCCGGAGCTTCCAACGACGACCTTGTCTCGGAGGCA
GATCCCATTTATGTGGCGTCTGATGAGGATGTTGACGGTGACGACACCCA
AGGAAAGATGCTACTGCTGCGTGGGACTGTGCGACACCGCAAGTGCTTGC
GAATCCAAACCGATGCCAACGCAGCTTTTGGTCACGGCATGTGCGGCTAC
TGCGCATCTATTCCAAAGTTGGATGACTTCCGCAGACGGATGATCAGGCA
GGCGGGTCAGGCTACGCATGGGAGCCACAAAAACATGAGGTAGGTACTAT
GTCTGAGTTTCCTTGGAACCCCTCATATATATCACTGCACTTGGTTTCTG
TCACTCAACGCCACGTTCGTTTGACTTGCGAGTCGGCTGTCCTTGAGTGT
CATTCGTGCAGGTACTAGGCAGGCCTGAACTGGTAAATCGAGCAACGCCA
CTTTTCGTTTGACTTGCGAGCCCTGTCCATGTGTGTCATTCGTACAGGTA
CATGGGCAGGCCTGAACTGGTAGATCGAGCACGCAAGTTGCGCGAAGATA
ATCGTGAGCTCAGGTACCAGGTGAGCTGCAGCACGCTGTTGCCCAGATGT
GTATCTGTATGTATCTGTATCATATCAGCTTCTTCCGCTTACACGTTATA
CGGTCTTCTTTGGTGCAGCTGTTTCGGCAGAGCACCGTCATCTGCCGGAA
GAGCGTGCAGGTGCTCGGTCTACGGCAACGTCTGGAGGCGGCAGCTGGTC
GCGGCGACATGCGTAAAATCGTTGATGACCTCAACCGCGCGTATGATCGC
GGCAGACTAGGCGCTGATCAGGCAGTGCTCATGAACTTCATCAGGGACCT
CGCGCGGAATATGAATGCTGCAGGCGCGTCAGGCAACAGGCAAGATGTGG
CAACAAGATCTCGAACTTCAAGTTCAACTTTGAATATGCAGGTGTAGCCG
CCACTTGGTGTACTGGTGCCTGCATGAATGCTGAAGGCTGACTCGAAACT
TGGCTGACTTGACGCATGGATTAGCAAGCACCTGAAAGGCATGCGGAGAG
AGCATGATCATTAGTTTGCCGCACTGTACTCTCAACAGTTGACGGCACAA
CGCCGACGCTGGCTTTCAAGGGCTACACACATCTTTGGTCAATGTAAGCT
ACCAGCCTTTAACATCAATCATTTTACGTGTGCCTGACACTGTGCAGGTG
GTCACCATCAACACATGCCCTGTACCAGGTGCTTCTATTCTGGGCAGGGC
CCAGGGTCACGTCGCTTCTGCAGCTCAACATCGGTGGGCCAACTGTGGAG
ACTGTCCGCAAGGGCCTTCGCACTGGCGTAAGTGCAAACAGTGGTGGTAC
TCTGATGTGCCTGGTATGGCAATGCTTCTTCCATTGCAATGCTCATGCTT
CCAATCTGATGTGCGCATTGTTCTCTCTGATGCACAGTATGTCTACACAG
GGTCCTTGAACCCGGAAGCGTTCAAGCGCTTGGGAGCAGTGTACAAGCGC
CTGAAGGAGGCGAAGGGCATAATTGGGCCTGTGCCTACGCAAATGTCAGA
GGACGAGACGAAGATCGACTCTTCCGTCACATTTGACCTAGCTTCAAACA
CCCTGGTGGGCTTCTGCGGCGACGAAGGCGACGGCCACACCTGCAGCTTG
GATGGTGTCCGCGTCGACCTGCCACCTGGACCTGATGGTATTTTTATGAT
CTATCGCTGATCTACAGTTGTCTGAGACCGTTAAATATGCATTAGCTTAT
CAGACACAGTACTTTTTGCATTCTATGCCACGACTTCAAACACCTCAACG
AGACGAGTCTAACATTGCAGTATGAGTACCACCTGTTACAATCTCATGTG
CACTGTTGCAAATGTTGATGGTTGTGTGCAGGTGACGGCTACGATGTCAT
CGTGCAGGCGTTTGCAGGCAAGAAACGAGGGGGCTATGGCAGAGTCATGG
TGATCAACCCCCTGCATTCACAGCTGCCAAAACTCTGTGTCATGGTACAG
GTAAGTGATGCATCATATATATGGAGCATACATATTGCTGTCACTATATT
ATATGCCGCTGGAGCTGACAATGCTGCAGGTTGCTGCACTGGTATAAATG
TTTACGGCATCTCTGCCGCCATTGTGATATTTAATTTATTGGACATCTCA
AACGTAACACAACACGTTGAACCTCGCTAAATCACAACAACACTGACGAC
AATATCTGTTGCTTAGCCATGATATTGACACTGACGCGCGCTTTGGCTTG
GTTTTTCTGCAGGCGGTGTGCAACAGGTTCGATGCAGACTTTGTGCGCAG
CCAATGGACACATGCAGCCGAGCTGTGGCGCACGCATTTGCTGCATGCGC
TGGGCCCCCTGATTGGCCATGCGTCGGATGGAGATGCTCGTAGGCGGAAA
CTGCAGCTTGAGGACTACCGTGCCCAAGGATCTGGGGAGCGCGGCAGCAG
ATATTACCTGCCAGCACCAGGCTTCCTGTTCAGTGCATGGCAACAAGGTA
CACAACACCAGGTTAAAAAAGCACTGTGTATTGATTTTTCAGGCCTTGCA
TATGTATGAGTCTCAGGCTGCCACTAGGTAATTTACAGCCTGCCGAATGC
TCATTTTTCACTCTATAGCTTTACGGTCTCGCGCATGTTGCTGCAGGTGG
GGAAGTGCGTGGCATCCATTCGCAGGACCCAATCCACAACGGGAAGAAGC
TGATGAACCCCTTGGACTCTGCAACGCGGGTGCTGGCGATGGGTGATTAC
ATGGCACACATGAGCCACGTTAAGGCCGTGTTTGACCAGCTCCCATTTGC
GCAGCACGGGCTCCGTGCGAACGACGTCGAGCGCACAGATAGGCAAAACT
GGGCGGCTTGCCAACGCCTTGCCTTCAGGAGAGTAAGGGCAGGCCTTGCT
ACCCTTGCAAGTCGCCACGGCACACCCACACATGGGACCAGTGCCTACCT
TGAGGTACATGTGCATTTCTAGTCGAAGCAACAAGCGCCATCAGGGACAG
ACTGATCATCATAGGCCTTAGCTTTAGCAGTAAGAAGTAAAGTCTATTAT
AGGATTGGCCGCATAACACCGCAGGTGCTTCAAGCACTGCTTGCAAATCG
AATCACCATTTCAAAGCTGCGTGCAACCTCCGCGCGCAGGCTTCAAGCTG
CCTTAAACGTGGATATGCAACTGCTAGTGGCTTGTGTGGCATACTGTGGC
AATGCGTGCGCGTGTGCCTGCCTGGCTTTGCGAACGCTACTGTCATCGAA
GAGCTCTGTCGCAGTGCTGTCATGGGGCATGTACCATACTGCAGGCGTAT
GCCATGCCGAATCAGTGTCATACCACTGCAGTTGAGGGTCCATTTTGCAT
TGATCTCAAGAGCCTCAATGTGCACGTTGCCCAGGTGATCTGGAACTACG
TGTCGGTGTTCTTCAGCAGCAGCTGGACGTTGGCTGAGAGAGCCGAAGCA
GCATCATTTGTGCTGCACTTCTTGCGGTTGTGGCGCTCTTGGCTGCTACG
CGCGGAGCGGCTCACCTTGAAAGCGAACTTCATCAGCAGGGAGTGCTATG
AGGACATCACCATCTCTGTGCACAACGTCATCCTCATCATCAGGTGCCCT
TCTTTCTTCTGCTGAGGCTGTATTTATGATGACGCTGTACGTCCTTTGCA
ATGAATTATGACCAGCTCTACATCAGGTGTGCATCACTATATATGATTGC
GCATGTACGCTCAGTAGATCTCAGATGCCAACACCCCTCATTAGCTCTCT
GCGGGGTCTGCCGTGTTTTCATGTTCTGCAGGATGTAACCATGTACAGAT
TATTGTAATTTCATGATTGCCATGGTAACATGTGTGTGTGTGTGGCACTG
CGCTTTGCACAGGTTCTTCCGGGACTTCACCCCTGGGCTGCCTTGTGCTC
TCATGCAAGATGGCAGCGACTGCTGTGAGAAGGTGTTCTCGGAGCTCTGC
GGAAGCGGCGCATCATCTACAATGCAACGCATCTACACACACCACGATGC
CTTGCGCGCGGTGCCAAAGTACTGGCATGTGGAAGAGCAGATGTGCAACC
CTGATGCGCCGCTAAAGAAACGCAGCCATGAGAAACTGTGTGATGTGTGG
CACAAGGTCAGTAAATCCGCTACATTGACAGACGGAGTCATTTCATGTGT
TCTGCCATGGCTAATTCGCACCATTACACTTTGATGTGAAAAGCTGCACC
ACTGTATGCAGATTTTGATTTTTGATAACAGCAACACAGGGGTTAGGATT
AAGTTTCCTGCAAATTGCGCAATGCCACCTTATCCCATGTACCTTTTCTC
GCTATGCCATTTGTGCTGCAGGATGCCATGCCTGGCAATGACAATGGTGC
TGATGGGCATCCTGCTGCTGCAGATCTCACAGTGTACCCCAGGTGAGGAA
ATGATACAAAAAACTGCTGTAGCATTTCACAGCGGAACGATGTGTGTGAA
GCTTTAGATCCTGCCTTTTTACACATTGTCAGCTGAGAATGCGTCCTCTT
GATGTTGTGCAAAGGGTGGTGCTTCGGTGGTGGCATTTAGAGTTCGTGCC
TCATACACAAGTGATGCAACATGGGCATGACACCCACGCTTTCAAAGCGC
ATCTGCTTTCAATGAGTTGGCGGCAGGCCTTCAAGCTATTGGAGTACTCA
TAGGCTCGCTATTGATGTACTGAGAAGTACGTACTCTCAATCAAATGTTA
TTCCTACCCAGCTTTACAGTCAGATGAACTCTGGAAGGCCTACATGTGTG
TTGCCTGGTTTTGCAGCGACGCGGAGCTGACACTACAATGGACGCTTGGT
CAGCAGCGAGCAACGACTTTTGCCTGGAGCTTGGGCATTAGACCCCCATC
CCTGAAACACCTGCTCTCACCGCCGGCTGGATTTCCTACAGCTCTGCCTT
CAACATTTGCGGAGGCCGATCAGTGGTACATTGAGCCATGGGCAGAAGAG
GAGACAGCACTTCTGCACATGCGGACAGCAGACCATGATGATCAGGGACA
CGAGGCGCCCATGAACACCATTCCTGCAGTTCCTAACAGGTGCGTGCTGC
TGTAGTTCAATGTGATCGTAACTGTTTTTTTTGTGGTTCCGTAGCACTAG
CCTATGTGATGTCGTCAGGCGAACCACAGGTAGTACTAGCTTCGTCTTTC
TAGGGGCTGAACAAGGGAGAAATGCAGGCAAAAACTACCATGACCCAGGA
CAACTTGTTGAATGGTTTGCTCACTCTGCACATGTTCACACAGGATGCGA
TGCCACTGTTATCACAGGCCCGCTGGAGCACAGGCGCCTATCCGCAGTGC
GGCGCTACCAGAAGCGGGCCGGGGTCAGCCAGCGACAGCGGCGAGGTATG
CATGCATGCCAAATGGTACGCTTGTGACCGTGCTCTTCAACACGCATGCG
CAGCATCCCTAGATCATCCAATCATCATGTTTGATACTATACAATCAGCG
GTGCTGGCATCGTTTTGGAGATGATAGAGGCCATCCCTTTTGTTACACCA
ATCTTTGCCTATTAGACTACAAGTACACCATAAGTGTTGCTGCAGTCCAC
TTTGAAGTGCCGCTGCATTCTGTGGACTTGCATAGCGTGATTACTGCTTT
GCTGATGCAGACTACTGCCAGTGACCGCACGCCCATCATCGCATGCTCTA
TGGTAAGCTTATGCATGGCACATTCAGCATGTCACTGGCAGCACCATCAT
GACGTGCACTGAAGTCTCACAATATCATGAGCGGATACTACCATGCAATG
CAAGCAGCTAACCATTATGTTTGCTTGCCTTTGCAGAGACGATGCGCCAT
CATTGCGCTCGGAGTCTGACACAGACGATGACGATGGAGATGAAACGGAT
CATCCTCACACATTGGGAGCCAAGGCGTTGGCTGCCATTCAGCCTAGTGA
TGAGGAGCTCAGTGATCATCCAGGGCTGGCGACTCACACATTTGATGTGG
TTGAGGATGACTTGGGGGTGGAGCAGGAGGTGATTGTTGGCGGCATAAGC
CGCGACAGCGACAACGCACGCAGCGAGTTGCGCGCCGTTGTGGACACGCT
CATCACAGAGGCCATTAGTGATGCGCCCACGGAAGGCGAGCCTGCGATGG
TCACCATCGAGTGCGAGGGGGGGCCGGGGCCTTCGAGCAGCCGTACGAAG
ATTTGTCCTCACGTCGAGGTTCCAGAGCGTGGGCTTGTCTCCATACAGCA
GCTGGTGTCGGAGCTGAACCATGTCAAGCCTGGTGCCAAGCTTTCAAAGG
ACCGGCTGACCCGTGTCACTCAAGGGACCAGCGGAGCACCGAGCCAGCGG
ACAGTGTTTCAGGTGATCTTTTTTTACTGTTGGTACATGCATTGCAGGTG
ATATTTTTCTTTACTGTTGGTACATGCATACTGGTGTTGTGCGCACATTA
GAACCTTGTGGAATTGAGTGGTGTTATGCGCACATCAGAATGTTGTGGAA
TTGAGTGTGTGTTTCCAGGAGAGCTTCTGCGGAAGTTGTGGTCTGGCAGA
CAAACGCGGTTTTATGTACTCGAACTGTATGCACATGTACATCTGCAACA
GTAAATCAAGTACGCGGTGTAGCGATTTGTGGACTTGTGATGCTAGTATG
GGAATGATTGTTCTGCCAACCCATGTTCATATTTCGTACCGAGATAGTGC
CATTTGCATGGGTGCTCTATTTACTTTGACTCTAACTTTACACTTCAAAT
ACTGTAACATGGAAGATGTTTGTGATATCATATTTGCTCATTGCACAAAA
AGTATCTCCATACAATTATGTAGTAACGCTTTTTGTTTTCTCCTGTTGTA
ATGTGCTGTGATGCTGCAGGCACTGGAGCGTGAGCGACGCATGCTGGGTC
TGCAAGGCGATTTTGCAATGATATTCGAAAACAGCTCGGAGAACCGCAAC
AGCCAACAGCCATACCATTTTTGGCTTGGCAAGGTGCAGCGTTTGATCAA
GCTTGCAGGTCGTCGTAGAGTCGAGTACAGAGAGCCAG

Coding sequence (CDS) from alignment at Contig_252:82174..90511-

>mRNA_17377 ID=mRNA_17377|Name=jgi.p|Trimin1|354462|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1263bp|location=Sequence derived from alignment at Contig_252:82174..90511- (Tribonema minus UTEX_B_3156 )
ATGGAGGTAGCGCCCGCTGCGCCCACTCATGTACGGCGCACTGATGCAGA
GGAGCAGCAATGGCTTGGCTTGGAGGCGTATGTGGCAGACTTAGATCGGC
ACCTGGTGGTGGATAGGGAAGGGCGACAGTACATGCAGGAGACTGACGCT
GCCGGAGCTTCCAACGACGACCTTGTCTCGGAGGCAGATCCCATTTATGT
GGCGTCTGATGAGGATGTTGACGGGCCCAGGGTCACGTCGCTTCTGCAGC
TCAACATCGGTGGGCCAACTGTGGAGACTGTCCGCAAGGGCCTTCGCACT
GGCTATGTCTACACAGGGTCCTTGAACCCGGAAGCGTTCAAGCGCTTGGG
AGCAGTGTACAAGCGCCTGAAGGAGGCGAAGGGCATAATTGGGCCTGTGC
CTACGCAAATGTCAGAGGACGAGACGAAGATCGACTCTTCCGTCACATTT
GACCTAGCTTCAAACACCCTGGTGGGCTTCTGCGGCGACGAAGGCGACGG
CCACACCTGCAGCTTGGATGGTGTCCGCGACCCAATCCACAACGGGAAGA
AGCTGATGAACCCCTTGGACTCTGCAACGCGGGTGCTGGCGATGGGTGAT
TACATGGCACACATGAGCCACGTTAAGGCCGTGTTTGACCAGCTCCCATT
TGCGCAGCACGGGCTCCGTGCGAACGACGTGATCTGGAACTACGTGTCGG
TGTTCTTCAGCAGCAGCTGGACGTTGGCTGAGAGAGCCGAAGCAGCATCA
TTTGTGCTGCACTTCTTGCGGTTGTGGCGCTCTTGGCTGCTACGCGCGGA
GCGGCTCACCTTGAAAGCGAACTTCATCAGCAGGGAGTGCTATGAGGACA
TCACCATCTCTGTGCACAACGTCATCCTCATCATCAGAAGCGGGCCGGGG
TCAGCCAGCGACAGCGGCGAGTCTGACACAGACGATGACGATGGAGATGA
AACGGATCATCCTCACACATTGGGAGCCAAGGCGTTGGCTGCCATTCAGC
CTAGTGATGAGGAGCTCAGTGATCATCCAGGGCTGGCGACTCACACATTT
GATGTGGTTGAGGATGACTTGGGGGTGGAGCAGGAGGTGATTGTTGGCGG
CATAAGCCGCGACAGCGACAACGCACGCAGCGAGTTGCGCGCCGTTGTGG
ACACGCTCATCACAGAGGCCATTAGTGATGCGCCCACGGAAGGCGAGCCT
GCGATGGTCACCATCGAGTGCGAGGGGGGGCCGGGGCCTTCGAGCAGCCG
CACTGGAGCGTGA