mRNA_17331 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|354052
Unique Name	mRNA_17331
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|354052 vs. uniprot
Match: A0A836CH90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH90_9STRA)

HSP 1 Score: 778 bits (2009), Expect = 9.690e-280
Identity = 517/517 (100.00%), Postives = 517/517 (100.00%), Query Frame = 2

Query:   44 MGAPAVGGAALAPRRVPGAWKRGCSAITVCGVNKSFKFKAGARVAARPATSRKRPLPHELEEDYNFKQEGEXXXXXXXCSAVAALPRHPSPHAGHLLGEAERGHLQRFLLAYEXXXXXXXXXXXXXXXXXXXXXXXXXXXDSRTPLLLFLQAYGCERSTHAAGLMPALHEDLHGTCLRLLTHGARGLSRAMTPSATAXXXXXXXXXXXXDEALLWTGIALGALVRQRCGAAAADVHVYVACAFAALELCRGXXXXXXXXXXXXXXXXXXXXXXGESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERPAPQLLRAYMLLAWLQLHLEDYAGFFMSFHRATNVAWAISERRRQLHACSSGWDAAPQIDDETSFDDETGVALEASHGLKFCMSDRLGAAPQFDDKTRVLRVMVDNSGLYLDSDPDAKAVALHRLQHTFHRLSPPQYKDTGEGRPGSLLLTLAPDVEGLPHLTHFPSEAGGVDQAGDVDQLQPQRPGAVVAAALE 1594
            MGAPAVGGAALAPRRVPGAWKRGCSAITVCGVNKSFKFKAGARVAARPATSRKRPLPHELEEDYNFKQEGEXXXXXXXCSAVAALPRHPSPHAGHLLGEAERGHLQRFLLAYEXXXXXXXXXXXXXXXXXXXXXXXXXXXDSRTPLLLFLQAYGCERSTHAAGLMPALHEDLHGTCLRLLTHGARGLSRAMTPSATAXXXXXXXXXXXXDEALLWTGIALGALVRQRCGAAAADVHVYVACAFAALELCRGXXXXXXXXXXXXXXXXXXXXXXGESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERPAPQLLRAYMLLAWLQLHLEDYAGFFMSFHRATNVAWAISERRRQLHACSSGWDAAPQIDDETSFDDETGVALEASHGLKFCMSDRLGAAPQFDDKTRVLRVMVDNSGLYLDSDPDAKAVALHRLQHTFHRLSPPQYKDTGEGRPGSLLLTLAPDVEGLPHLTHFPSEAGGVDQAGDVDQLQPQRPGAVVAAALE
Sbjct:    1 MGAPAVGGAALAPRRVPGAWKRGCSAITVCGVNKSFKFKAGARVAARPATSRKRPLPHELEEDYNFKQEGEXXXXXXXCSAVAALPRHPSPHAGHLLGEAERGHLQRFLLAYEXXXXXXXXXXXXXXXXXXXXXXXXXXXDSRTPLLLFLQAYGCERSTHAAGLMPALHEDLHGTCLRLLTHGARGLSRAMTPSATAXXXXXXXXXXXXDEALLWTGIALGALVRQRCGAAAADVHVYVACAFAALELCRGXXXXXXXXXXXXXXXXXXXXXXGESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERPAPQLLRAYMLLAWLQLHLEDYAGFFMSFHRATNVAWAISERRRQLHACSSGWDAAPQIDDETSFDDETGVALEASHGLKFCMSDRLGAAPQFDDKTRVLRVMVDNSGLYLDSDPDAKAVALHRLQHTFHRLSPPQYKDTGEGRPGSLLLTLAPDVEGLPHLTHFPSEAGGVDQAGDVDQLQPQRPGAVVAAALE 517

[Close]

BLAST of jgi.p|Trimin1|354052 vs. uniprot
Match: A0A835ZID0_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID0_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.470e-9
Identity = 47/127 (37.01%), Postives = 61/127 (48.03%), Query Frame = 2

Query: 1004 ERPAPQLLRAYMLLAWLQLHLEDYAGFFMSFHRATNVAWAISERRRQLHACSSGWDAAPQIDDETSFDDETGVALEASHGLKFCMSDRLGAAPQFDDKTRVLRVMVDNSGLYLDSDPDAKAVALHRL 1384
            +RP   LLRA+ LLAWL   LEDYAGF+  +HRAT+VAWAI   R+Q             ++ E   +++T + LE                        VLRV     G YLD DP A+AV   R+
Sbjct:  266 QRPVLPLLRAHALLAWLHFVLEDYAGFYAYYHRATDVAWAILRARQQAAPAGCRKSDGDALE-EMLAEEDTWLFLE------------------------VLRVGKAIGGAYLDGDPRARAVVQSRM 367

[Close]

BLAST of jgi.p|Trimin1|354052 vs. uniprot
Match: A0A835ZCH1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH1_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.920e-5
Identity = 53/191 (27.75%), Postives = 79/191 (41.36%), Query Frame = 2

Query: 1004 ERPAPQLLRAYMLLAWLQLHLEDYAG-------FFMSFHRATNVAWAISERRRQLHACS-----------SGWDAAPQIDDETSFDDETGVALEA--------SHGLKFCMSDRLGAAPQFDDKTRVLRVMVDNSGLYLDSDPDAKAVALHRLQHTFH--RLSPPQYKDTGEGRPGSLLLTLAPDVEGLPH 1492
            + P  +LLRAYM+ AWL L LED+AG       F++ +H A NVAW+I + +R                  G    P ID++     ET   ++A            +  +  RL A        R L V  D+ G  +            R        R    + +D GEGRPG++    +P ++GLP+
Sbjct:  259 DAPVAELLRAYMMAAWLLLKLEDFAGWLEGFARFYVFYHHAANVAWSILQLQRXXXXXXXXXXXXXXXXLGGPAEVPVIDEDAWMMLETLRVMKAFTDSYLAGDRQTRAAVRRRLSACFPRACFPRELAV-TDSYGTAVXXXXXXXXXGNVRXXXXXXXXRFQLERCRDVGEGRPGTMFTVYSPPMQGLPN 448

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354052 vs. uniprot

BLAST of jgi.p|Trimin1|354052 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A836CH90_9STRA	9.690e-280	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZID0_9STRA	2.470e-9	37.01	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
A0A835ZCH1_9STRA	2.920e-5	27.75	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_205	contig	Contig_205:210082..217612 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|354052\|estExt_Genemark1.C_Ctg_2050023
Hectar predicted targeting category	mitochondrion
TranscriptId	354374
Track	FilteredModels1
ProteinId	354052

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354052	gene_17331	Tribonema minus UTEX_B_3156	gene	Contig_205 210082..217612 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354052	Trimin1\|354052\|estExt_Genemark1.C_Ctg_2050023	Tribonema minus UTEX_B_3156	polypeptide	Contig_205 210082..217569 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17331_13	exon_17331_13	Tribonema minus UTEX_B_3156	exon	Contig_205 210082..210129 -
exon_17331_12	exon_17331_12	Tribonema minus UTEX_B_3156	exon	Contig_205 210369..210386 -
exon_17331_11	exon_17331_11	Tribonema minus UTEX_B_3156	exon	Contig_205 210528..210657 -
exon_17331_10	exon_17331_10	Tribonema minus UTEX_B_3156	exon	Contig_205 211997..212094 -
exon_17331_9	exon_17331_9	Tribonema minus UTEX_B_3156	exon	Contig_205 212809..212847 -
exon_17331_8	exon_17331_8	Tribonema minus UTEX_B_3156	exon	Contig_205 212946..213008 -
exon_17331_7	exon_17331_7	Tribonema minus UTEX_B_3156	exon	Contig_205 213149..213269 -
exon_17331_6	exon_17331_6	Tribonema minus UTEX_B_3156	exon	Contig_205 214163..214713 -
exon_17331_5	exon_17331_5	Tribonema minus UTEX_B_3156	exon	Contig_205 215646..215703 -
exon_17331_4	exon_17331_4	Tribonema minus UTEX_B_3156	exon	Contig_205 215773..215819 -
exon_17331_3	exon_17331_3	Tribonema minus UTEX_B_3156	exon	Contig_205 215940..215981 -
exon_17331_2	exon_17331_2	Tribonema minus UTEX_B_3156	exon	Contig_205 216056..216305 -
exon_17331_1	exon_17331_1	Tribonema minus UTEX_B_3156	exon	Contig_205 217481..217612 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17331	CDS_17331	Tribonema minus UTEX_B_3156	CDS	Contig_205 217481..217569 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_17331	UTR5_17331	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_205 217570..217612 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_205:210082..217612-
coding sequence from alignment at Contig_205:210082..217612-

spliced messenger RNA

>mRNA_17331 ID=mRNA_17331|Name=jgi.p|Trimin1|354052|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1597bp|location=Sequence derived from alignment at Contig_205:210082..217612- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCGCACCAGCCGCCTTTGCGGCAGGTGTTGCGGTCTGCGTGCGATGGGTG
CACCCGCAGTCGGCGGCGCTGCTCTGGCACCACGCCGTGTGCCAGGTGCC
TGGAAAAGGGGATGCAGTGCCATTACAGTGTGCGGCGTAAACAAAAGCTT
CAAGTTCAAGGCTGGCGCGCGCGTGGCGGCACGGCCCGCCACGTCCCGCA
AGCGGCCCCTGCCCCACGAACTTGAAGAAGATTACAACTTCAAGCAGGAG
GGGGAGGAGGAGGAGCAGCAGCAGCAGTGCTCAGCTGTGGCAGCGCTCCC
GCGCCACCCGTCGCCGCACGCGGGGCACCTGCTGGGCGAGGCGGAACGCG
GCCACCTGCAGCGGTTTCTGCTGGCGTATGAGGTGGAGCGCGGCCACCTG
CAGCGCTTCCTGCTAGCGTACGAGGCGGAGCGCGGCCACCTGCAGCGGTT
CCTGCTGGCGTATGACTCGAGAACTCCCCTGCTGCTGTTCCTGCAGGCGT
ACGGGTGCGAGCGCAGCACGCATGCGGCTGGCCTCATGCCCGCGCTCCAC
GAGGACCTCCACGGCACGTGCCTGCGCCTCCTCACGCATGGCGCGCGCGG
GCTCAGCCGCGCCATGACACCCAGTGCCACCGCCGCCGCCGCCGTCGCCG
CCGCTGCCGCCGCCGCCGCGGACGAGGCGCTGCTGTGGACGGGCATCGCG
CTGGGCGCGCTCGTGCGGCAGCGCTGCGGCGCGGCGGCGGCGGACGTGCA
CGTCTACGTTGCCTGCGCGTTCGCGGCGCTGGAGCTGTGCCGCGGCGGCG
GCGGCGGCGGCGGCGGCGGAGGAAGCGCCAGCGGCGGCAGTGGCTTTGGC
GGCGGCGGCGGCGGGGAAAGTGGTGGCGGCGGCGACGGCGGCGGCGGCGG
CGACGGCGGCGGCGGCGGCGACGGCGGCGGCGGCGGCGACGGCGGCGGCG
GCGGCGGGGGGAGCGGTGGGGGAGGGGGTGGTGGAGGCGGCGGCCGCGGC
GGCGAGCGGCCGGCGCCGCAGCTGCTGCGCGCGTACATGCTGCTCGCGTG
GCTGCAGCTGCACCTGGAGGACTATGCGGGGTTCTTCATGTCCTTCCACC
GCGCAACGAATGTGGCGTGGGCTATCAGCGAGCGGCGCCGCCAGCTGCAC
GCGTGCAGCAGCGGCTGGGACGCCGCGCCGCAGATCGACGACGAGACGAG
TTTCGACGACGAGACGGGGGTCGCGCTTGAGGCAAGTCACGGCTTGAAGT
TTTGCATGAGCGATCGGCTGGGCGCCGCGCCGCAGTTCGACGACAAGACG
AGGGTTCTGCGCGTCATGGTGGATAACTCTGGCCTGTACCTCGACAGCGA
TCCGGATGCAAAGGCCGTTGCGCTGCACCGACTGCAGCACACCTTCCATC
GATTGAGCCCGCCGCAGTACAAGGACACGGGCGAGGGGCGGCCCGGCTCG
CTGCTGCTCACGCTCGCGCCGGACGTGGAGGGCCTGCCGCACCTCACGCA
CTTCCCTTCAGAGGCGGGGGGAGTCGACCAGGCGGGTGACGTCGACCAGC
TCCAACCGCAGCGGCCGGGCGCCGTTGTCGCGGCCGCGCTGGAGTAG

protein sequence of jgi.p|Trimin1|354052

>Trimin1|354052|estExt_Genemark1.C_Ctg_2050023 ID=Trimin1|354052|estExt_Genemark1.C_Ctg_2050023|Name=jgi.p|Trimin1|354052|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=518bp
MGAPAVGGAALAPRRVPGAWKRGCSAITVCGVNKSFKFKAGARVAARPAT
SRKRPLPHELEEDYNFKQEGEEEEQQQQCSAVAALPRHPSPHAGHLLGEA
ERGHLQRFLLAYEVERGHLQRFLLAYEAERGHLQRFLLAYDSRTPLLLFL
QAYGCERSTHAAGLMPALHEDLHGTCLRLLTHGARGLSRAMTPSATAAAA
VAAAAAAAADEALLWTGIALGALVRQRCGAAAADVHVYVACAFAALELCR
GGGGGGGGGGSASGGSGFGGGGGGESGGGGDGGGGGDGGGGGDGGGGGDG
GGGGGGSGGGGGGGGGGRGGERPAPQLLRAYMLLAWLQLHLEDYAGFFMS
FHRATNVAWAISERRRQLHACSSGWDAAPQIDDETSFDDETGVALEASHG
LKFCMSDRLGAAPQFDDKTRVLRVMVDNSGLYLDSDPDAKAVALHRLQHT
FHRLSPPQYKDTGEGRPGSLLLTLAPDVEGLPHLTHFPSEAGGVDQAGDV
DQLQPQRPGAVVAAALE*

mRNA from alignment at Contig_205:210082..217612-

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17331 ID=mRNA_17331|Name=jgi.p|Trimin1|354052|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7531bp|location=Sequence derived from alignment at Contig_205:210082..217612- (Tribonema minus UTEX_B_3156 )
CCGCACCAGCCGCCTTTGCGGCAGGTGTTGCGGTCTGCGTGCGATGGGTG
CACCCGCAGTCGGCGGCGCTGCTCTGGCACCACGCCGTGTGCCAGGTGCC
TGGAAAAGGGGATGCAGTGCCATTACAGTGTGGTAAGTATTCTCCGCCAA
AAAAGAGTCACTCTCACACCGTCCCCCATGAAAGTCAACGGATCATAACT
ATCTCATTTGTATCAGACTAATGCCAGGAGATGATCCGCTATTGCGAGCC
GTGTCTTACAACCATACCATAAAGGCCACTGCTTGTCGCTTTCAGAATCA
GCAGGAGATGTTGACATTCAACCTGGGGTACTCCGAGATCTATGTTGAGA
GAGATCAGCACCGGTGATTTGATGTTGTCGTGCACCATCCGCTGGCCTGC
AAGGCGGCGAACAGGAGCAGATAAGTATTGTCCACACGCACTGGAGCGTC
CTGACGCTCGCATGCATCAATTCAGAATCCGCAGCATTGCTCAGCATCGC
TGCCCGGATTCCATGCAGTATGATGCGTTGAGCGCAGGCTAGGTTTTTCA
TGCCCTCGGCAAGCATTCGACGAAAGTACAACATGTACTGCTCATGTCAA
TCCAACTCCATGCTTTTGGTCAACGTTTGCTCAGACTGTCTGTCAGGCAG
GCAGATGAGCGTGTTTGTAGTGACGTCGATAGTAAGTGGCTGTTTTCAGC
GAATGGCACTGGTTCTCACGTGCACACGAACCCCAACACGCCATGACTGA
TTCAGCCTGTCACGTCAGTGAGGGCACCTCCTTGAAGTCAGACGGGAGCG
GTCGGCTCCTCACACGTGAAAGGAGAGGATGAGCATCATCGCACACCACT
CTGAAGTTTCATTCGTTGATCAACTGCATCAAGATCCAAATGGTAGTTTA
AGTTCTGTCAGAGGCGCTCGCCTGCCTGCGGTTCCCGAAAACGGACTTGA
AATGTGTTAATTAGGCCTGATCCGGCGTCAACCTATGTGATCTGAAACTC
CATCGATACATGTGGGGAACCTACTGAAATCGCTACTTCGCTAACCGTTT
TGGAGCTCTGAATACTTGCAAACGCCTTTGTCAGTGGTTGCACGCGTCCA
CGACCATTTCAAGTCATAGATGTGCTGCCAAAGTAACGCGGAGAGTCGCC
GCAGTGCTCAACCAAAGCTGGCAACCTCAACTACTTAACGTGGCATTGGA
GCCCTGCAGTGCCACACGCCTGCACACATCGAATCCTCTGCCTCTCGCGA
CGTGCAGCAACGCAAGCGCGGCCCAAAAACCATATTTGACATGATGCCCC
CCGGCAGCGGCGTAAACAAAAGCTTCAAGTTCAAGGCTGGCGCGCGCGTG
GCGGCACGGCCCGCCACGTCCCGCAAGCGGCCCCTGCCCCACGAACTTGA
AGAAGATTACAACTTCAAGCAGGAGGGGGAGGAGGAGGAGCAGCAGCAGC
AGTGCTCAGCTGTGGCAGCGCTCCCGCGCCACCCGTCGCCGCACGCGGGG
CACCTGCTGGGCGAGGCGGAACGCGGCCACCTGCAGCGGTTTCTGCTGGC
GTATGAGGTGAGTGCGGCACGTCACACGCTGTCTCTTCAAGTTTTACTTC
AAGTTTACAATCAGTGCACCTGCTGGGCGAGGTGGAGCGCGGCCACCTGC
AGCGCTTCCTGCTAGCGTACGAGGTGAGCGGCACGCGTCACGCTTCAAGT
TTCAGTTCAGGTTGACAAGTAATTGAGATTAAATCCCGGCACGCTTCTAG
TGCAAGTTGACAGATAATTGCAGAATTCCACGTGCTGGCCGAGGCGGAGC
GCGGCCACCTGCAGCGGTTCCTGCTGGCGTATGACTCGAGGTGGCCGTGG
CACATCAGACGCTGTGTCTCTTCAACTTCAATTTGAAGTTTACGATTGTG
CCTTGCGAGAACTCCCCTGCTGCTGTTCCTGCAGGCGTACGGGTGCGAGC
GCAGCACGCATGCGGCTGTTTGCTAAAGTTCAACTTCAACTTCAGAGAAC
TGCAGGGGCGCGAGGCCGAGCGCGCCCACTTGCAGCGGGTCCCTCTGACG
TGTGAGATGAGCGTGGCACGTCTCGCTGTCTCTTGAAGCCTGTATCACTG
ATACCAGACTCGCGTGTGAAGCATCGGTTCCGTGACCGCTGTAACTGTCA
CTGCAAACCGTCAAAACACTGGGCCAAGCCCGTGTGTTCAACAGAGATGA
CTTGCATGGGCGTGCCACGGGGCCCGTTGACAGACGCCGTGCATCGCCTT
CGTGGTCGCCGCCAGTGCCACTACGAGGCGGTGACGTCTTGGCGTGATCC
GCAGAGCACCAAAGTGACTGATGGGCGATACGCGGGTTCGCAGCGATCGC
ATGAAGTTTTCTTCGAGTCTTACTTCAAGATTACGATAATGCACTTGCAA
GAATCGTGTACGCCGCCAGAGCAACAACAAGGCGGTAACGTCTTGGCGCG
ACTTGCAGAGCACCACAATGACCGGGCGACACGCGGGTTCACAGCGATTG
CGTGACACACAGCAGCATCACAACCTGTGCGCAGGGCTTCCCGTGCTTGC
TCTCTCTCGCGCGATGGCGACGCCCCGAGCGTTGCCATGATGCAGAACGC
CCCCTCCCCCCCCCCCACACCCACCCCCCCTGTCCCAACACCACGCTGCT
GTCTACCTGCCTACCCCACACGAGCCTGTTGAGCGCTGTCGCCGCTGATC
ATCGCCGCCGATCATCACCAACCCCCGCTGCTACCTACCCCCCCCCCCCC
CCCCCACACACACACACTGTCCCAAGAACCCACAATGCTACCTACCTACC
TACCTACCCCATCTATCCCGCACGAGCCCGCTGAGCGCTGCCGCCTCTGA
TCATCACCAACCCCACGCTGCTACCCACCTAACCCCCCCCCCCTCGCAGG
GCCTCATGCCCGCGCTCCACGAGGACCTCCACGGCACGTGCCTGCGCCTC
CTCACGCATGGCGCGCGCGGGCTCAGCCGCGCCATGACACCCAGTGCCAC
CGCCGCCGCCGCCGTCGCCGCCGCTGCCGCCGCCGCCGCGGACGAGGCGC
TGCTGTGGACGGGCATCGCGCTGGGCGCGCTCGTGCGGCAGCGCTGCGGC
GCGGCGGCGGCGGACGTGCACGTCTACGTTGCCTGCGCGTTCGCGGCGCT
GGAGCTGTGCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGAAGCGCCA
GCGGCGGCAGTGGCTTTGGCGGCGGCGGCGGCGGGGAAAGTGGTGGCGGC
GGCGACGGCGGCGGCGGCGGCGACGGCGGCGGCGGCGGCGACGGCGGCGG
CGGCGGCGACGGCGGCGGCGGCGGCGGGGGGAGCGGTGGGGGAGGGGGTG
GTGGAGGCGGCGGCCGCGGCGGCGAGCGGCCGGCGCCGCAGCTGCTGCGC
GCGTACATGCTGCTCGCGTGGCTGCAGCTGCACCTGGAGGACTATGCGGG
GTGCGTTTTTTTACACCTGACTCGCCTGCGACTCTGATTCATTGATCTGT
GACTCAATGGGGCGGCGCGTCTTTCCAGGCGATGTGCAGTGGTACGCAGC
CGCATTTCGCATTCGCTGAGCGGTGTGGCGATTGACTGCTGCGCAGCTGG
CCAACTGCGCGCCATGCAAACCCTCCTTCACCACCCAGGCTAACCCCTAC
TTCAACTCTACAGCGAAGCGCGCGGGCGTGATTGTGCTCCAGCGCTTTCA
GTTCCTCACACACTTATGCCGCCATGCTGTTAGAGGGACGTGGAATTCGT
CGTTTGATTGTACTTTGCTTTTTCCTTGCAATGTGTGTAACGGATTGCGT
GTGACTAGGCAAACCCCGGTCTCTAGTGTCTCCATTGGTGTTCTCCTGAT
GTTGCTTGATCAAGGCAGCGTGTGGATGACACTGGTTGTATTTGAACTGC
AGGTCATCTCATCGGCAGTTGTCTCGCTCCGCGCGAGCAGCTGGCATGGC
TCACTCTAGACATGAGGTTAGGTTTGCAGTTGATATTATGAGGGCTTTGG
GGTATGGGCTAGATCAAATCTGTAAAAGAGTTACTCAATGAATACTTCAA
CAGCGAGTATCTTGGAACTTGAAGTTTTCATAGCAGCCCATGCTCGTGCT
GCAGGTTTTTCGTTTCCTTTCACTACTTGAGCATTCAACTCACCCAAGAT
TACTAGAAGTACTAAGTAGTCATTCACTCCGATAACACTCGTGCAGGGTA
TCCTTTCTCCGAAGGCGCGTCCTCTCTTCCCCGACACGATATCTGATGGC
GCGCACTCTGCGCAAACCTCACTCATGATTAACGATTCATGAATCGTGGC
GATTTGTTCATGAAATTCATGATCCATGATGCGCGCGCTGCAGGTTCTTC
ATGTCCTTCCACCGCGCAACGAATGTGGCGTGGGCTATCAGCGAGCGGCG
CCGCCAGCTGCACGCGTGCAGCAGCGGCTGGGACGCCGCGCCGCAGATCG
ACGACGAGACGAGTGTCGCGCTTGAGGCGAGTCACAGCTTGAAGTTTTGC
ATGAGCGATGTATATTGAAGTTGAGGGTCGCCCTCGAGGTACCCGCCGTA
TGTTGAAGGCGCTGCCAGCTGCATGCGCGCAGCGGCTGGGGCGCCGCGCC
GCAGTTCGACGACGAGACGGGGGTCGCGCTTGAGGCAAGTCACGGCTTGA
AGTTTTGCATGAGCGATGTATGTTGAAGTTGAGGGTGGCCCTCGAGGCGA
GTCCAGGACCTGAAGTTTTGCATGACCGCCGTATGTTGAAGGCGCTGCCA
GCTGCATGCGCGCAGCGGCTGGGCGCCGCGCCGCAGTTCGACGACAAGAC
GAGGGTCGCGCTTTGAGGCAAGTTCACGACTTGAAGTTTTGTACTGTCGC
AAGAATGTATACTTCAAAGTATCGACGTTGGGTTTCATAGACATGCGGGG
TGCACGTCGACGACAAGAGGGTACGCGCTTGAGGCAAATCACAACTTGAA
GTTTTGCATGACTGCCGTATGTGGAAGTCGAGGCTCGCCCTCGAGGCGAT
TCCATGACCTGAACTTTTGCATGATTGCTGTACGTTGAACGCGCCGCCAG
CTGCACACGCGCAGCGGCTGGGACATCAATGACGAGATGAGGGCTGCTCG
AGGCAAGTTCGCAACTTGAGGTTTTGCAGACTGCCCCAATCTGATTCCAC
ACTTCATGGCGGGTCGCGCTCCTTGTTGATACTACCACCAGGCGCCTGCG
CACGCATGCGCAAAATATGCGTACGCTCAACCAGGTACTGCACGTCATGA
CGGGTCTCGCACTCCCAGTTGATAAACCTGCGCATATGCGCAAACCATTT
ACGCATCCAATCAGATTCTACGCGCGATGGCGGGTCTCGATCCTTATTGA
ATCAATGATATTAGTACTGACTGCCACCAGGTGCCCGCGCGCGTATGCGC
AAACTGTTGGCGCGTCCAATCAGAGTCTGTTTGTCATGGTGGCTCTCAGT
CCCTGTTGATGCTGACTACCGCCAGACGTCCGCTCGCGTATGCGCAAATC
ATGTGCACGCCCAATCAGGTTCTGCGCGTCATGGTGGATAACTCTGGCCT
GTACCTCGACAGCGATCCGGATGCAAAGGCCGTTGCGCTGCACCGACTGC
AGCACACCTTCCATCGGTGAGTCACCTGAAGTTGAGGTTGAAGTTGAAGC
ATGAACTCTGACAAATTTAGTCGACTTCAAAATCTTGCACATGGTTGCAG
CAGGAGCACTATCTTCCATCGGTGAGTGGTTGACACTTGAAGCTCACACA
CTGAAATTGATGCTTTCAGCTGACCCTAGTACCTTGAACATGATTGCGGC
AGGAGCACATCTTCCATCGGTGAGTGACTGCCACTTGAAGCTGAAGTTAC
AACTGAAATTCACGCACTGAACTCGGCTTATTCACTCGACCACAATACCT
TGAACATTTCTAAGACAGGAGCACACATTCAATCGTTGAGTGACTGCCAC
TTGAAGATTGGTATTGAAGTTTAAGCTCGAACTTGGGCGGGTCCGGTCGC
CTTCCAAACCTTGCAAATATAGGTTGCGGCAGGAGCACACCCACTTGAAG
TAGAGATTGAAGTTGAAGCTCACACACTGAACTCGTCGGATTCAGCCGAC
TTCAATACCTTGCAGATGGTTGCGGCAGCAGCACACCTTCAAGTCATTGA
GCGACTGCTACTTGAAGTTCACACACTGAACACGGGAAATGTGCAAGTAG
CCAACTTCAATAGCTTCAGCGACAGGTGTTTGGCACGTGTGTGGCTTCAA
CATGCCATGGCCAAGAGACCACTAGATTGCTGACCTCGAGAGGATGTTAG
GGTCAGGGTGAGAGTTTAGGTGTGTGCCACGTGGCGTGCTTATGGTTTCC
ACAAGGCGGAGTGGCGCAGATGATACATCACAACAGACGCACAAGAAGCA
CTAGAGCGGCCAATTAAACAAATTAGACTGGACCAATTCCATGGTTTCGC
TATTTTTATTTGGGTTGATTTATGCTTATTTTGTATAAATTCCGGCAGGC
AGCGTTCTTGCGGTCACGATGGATCGGCATTTGTTGTGTGGGGAAGGAAA
GGGGGGAAATGGTATTTTCCCTGCCGCCTCTGGGAGCAGACTACATGACT
GCGTGCCCGTTGTAATTCCCTGAACACCTCCCGGTTGCGTAGTCCCCCGA
ACACCCCCCGGCCGGCGAGGGGGCCGGCCGTGTACATCGTCGGATCAACA
AGATACTCCAGCTGATTCCAACAGTACTTCTTTGGCGACGCAGCCGCAGT
ACGAGGACACACGCGAGGGCAGGCCGTGTATTTCGCCGAAACAACGATGT
TAAATAATCATTTAGAAGTAGCTAACTTCAACAGTAACTTTTTTGGTGAC
GCAGATCGAGCCCGCCGCAGTACAAGGACACGAGCGAGGGGCGGCCATGT
ATACAGTCGCACAACACTCCAACTAACTTGCGTAGTAACTTCTTTGGTGG
CGCAGATTGAGCCCGCCGCAGTACAAGGACACGGGCGAGGGGCGGCCCGG
CTCGCTGCTGCTCACGCTCGCGCCGGACGTGGAGGGCCTGCCGCACCTCA
CGCACTTCCCTTCAGAGGCGGGGGGAGTCGACCAGGTGCGCCAGCGCACA
GCCGCGCAAAACAGCCCACTCTTCGTTTTTAGATTGAAGTTTCAACAAAG
CAGGGCGTATTGTCGTCGGCGTTTTAAACTTACACACAAGCAAGGGCCTG
CCGCGCCTCACGCACCCCCTTCCGAGGCGGGTGACGTCGACCAGGTGCGC
CAGTGCTCAGCGGCCGCTAAATTTCTTGTTGGTGGCTCCTTGCTATATTG
AAAGCGGGACGTATTTATTATTTTGTTGTAGTATTAAAGCTTCAACCGCA
ACGGCCGGGCGCTGTTGTCACGGCCGCGCTGGCGCAGCTCGGGGGCCAAG
CGCTGCTGCGGCACTATATTTTGTAAACAAGTAGTTTTCAGAATAAATTG
TCCCTGATTTAGCACCAACTGCCGCCCCTGCAGCTCCAACCGCAGCGGCC
GGGCGCCGTTGTCGCGGCCGCGCTGGAGTAG

Coding sequence (CDS) from alignment at Contig_205:210082..217612-

>mRNA_17331 ID=mRNA_17331|Name=jgi.p|Trimin1|354052|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1554bp|location=Sequence derived from alignment at Contig_205:210082..217612- (Tribonema minus UTEX_B_3156 )
ATGGGTGCACCCGCAGTCGGCGGCGCTGCTCTGGCACCACGCCGTGTGCC
AGGTGCCTGGAAAAGGGGATGCAGTGCCATTACAGTGTGCGGCGTAAACA
AAAGCTTCAAGTTCAAGGCTGGCGCGCGCGTGGCGGCACGGCCCGCCACG
TCCCGCAAGCGGCCCCTGCCCCACGAACTTGAAGAAGATTACAACTTCAA
GCAGGAGGGGGAGGAGGAGGAGCAGCAGCAGCAGTGCTCAGCTGTGGCAG
CGCTCCCGCGCCACCCGTCGCCGCACGCGGGGCACCTGCTGGGCGAGGCG
GAACGCGGCCACCTGCAGCGGTTTCTGCTGGCGTATGAGGTGGAGCGCGG
CCACCTGCAGCGCTTCCTGCTAGCGTACGAGGCGGAGCGCGGCCACCTGC
AGCGGTTCCTGCTGGCGTATGACTCGAGAACTCCCCTGCTGCTGTTCCTG
CAGGCGTACGGGTGCGAGCGCAGCACGCATGCGGCTGGCCTCATGCCCGC
GCTCCACGAGGACCTCCACGGCACGTGCCTGCGCCTCCTCACGCATGGCG
CGCGCGGGCTCAGCCGCGCCATGACACCCAGTGCCACCGCCGCCGCCGCC
GTCGCCGCCGCTGCCGCCGCCGCCGCGGACGAGGCGCTGCTGTGGACGGG
CATCGCGCTGGGCGCGCTCGTGCGGCAGCGCTGCGGCGCGGCGGCGGCGG
ACGTGCACGTCTACGTTGCCTGCGCGTTCGCGGCGCTGGAGCTGTGCCGC
GGCGGCGGCGGCGGCGGCGGCGGCGGAGGAAGCGCCAGCGGCGGCAGTGG
CTTTGGCGGCGGCGGCGGCGGGGAAAGTGGTGGCGGCGGCGACGGCGGCG
GCGGCGGCGACGGCGGCGGCGGCGGCGACGGCGGCGGCGGCGGCGACGGC
GGCGGCGGCGGCGGGGGGAGCGGTGGGGGAGGGGGTGGTGGAGGCGGCGG
CCGCGGCGGCGAGCGGCCGGCGCCGCAGCTGCTGCGCGCGTACATGCTGC
TCGCGTGGCTGCAGCTGCACCTGGAGGACTATGCGGGGTTCTTCATGTCC
TTCCACCGCGCAACGAATGTGGCGTGGGCTATCAGCGAGCGGCGCCGCCA
GCTGCACGCGTGCAGCAGCGGCTGGGACGCCGCGCCGCAGATCGACGACG
AGACGAGTTTCGACGACGAGACGGGGGTCGCGCTTGAGGCAAGTCACGGC
TTGAAGTTTTGCATGAGCGATCGGCTGGGCGCCGCGCCGCAGTTCGACGA
CAAGACGAGGGTTCTGCGCGTCATGGTGGATAACTCTGGCCTGTACCTCG
ACAGCGATCCGGATGCAAAGGCCGTTGCGCTGCACCGACTGCAGCACACC
TTCCATCGATTGAGCCCGCCGCAGTACAAGGACACGGGCGAGGGGCGGCC
CGGCTCGCTGCTGCTCACGCTCGCGCCGGACGTGGAGGGCCTGCCGCACC
TCACGCACTTCCCTTCAGAGGCGGGGGGAGTCGACCAGGCGGGTGACGTC
GACCAGCTCCAACCGCAGCGGCCGGGCGCCGTTGTCGCGGCCGCGCTGGA
GTAG