mRNA_17321 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|354047 vs. uniprot
Match: A0A835Z9A8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A8_9STRA) HSP 1 Score: 795 bits (2052), Expect = 2.600e-290 Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 1
Query: 1 MEHGHNFDCNGAGNHDDVVLEVEEFIEKGVLVVDNILSTAELAAAREGLHDTLRSHGCHSDDLMGTGGALSRLSSTHGSGGILDIFYPPWKLKVCENERLFGAMRDLWRCTYGARHPHFSHPYTEDMDADTGYMYIDRVGYRVDCITPRAKAALGSRVPDAVSAHXXXXXXXXXXXXXXXXXXXXQRPLQRSLTPHLDCCPHKMAEASSSRAESRKWRPIQSFVALTDTPDKDMGGFECVPGFHLEFNEWAKTRPPEPRADGSSVPPPCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQWVGPVKMEDAPDYEFSSLGRCLAACYTALSNRALQAVALSRALSQEQRPLC 1212
MEHGHNFDCNGAGNHDDVVLEVEEFIEKGVLVVDNILSTAELAAAREGLHDTLRSHGCHSDDLMGTGGALSRLSSTHGSGGILDIFYPPWKLKVCENERLFGAMRDLWRCTYGARHPHFSHPYTEDMDADTGYMYIDRVGYRVDCITPRAKAALGSRVPDAVSAHXXXXXXXXXXXXXXXXXXXXQRPLQRSLTPHLDCCPHKMAEASSSRAESRKWRPIQSFVALTDTPDKDMGGFECVPGFHLEFNEWAKTRPPEPRADGSSVPPPCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQWVGPVKMEDAPDYEFSSLGRCLAACYTALSNRALQAVALSRALSQEQRPLC
Sbjct: 1 MEHGHNFDCNGAGNHDDVVLEVEEFIEKGVLVVDNILSTAELAAAREGLHDTLRSHGCHSDDLMGTGGALSRLSSTHGSGGILDIFYPPWKLKVCENERLFGAMRDLWRCTYGARHPHFSHPYTEDMDADTGYMYIDRVGYRVDCITPRAKAALGSRVPDAVSAHXXXXXXXXXXXXXXXXXXXXQRPLQRSLTPHLDCCPHKMAEASSSRAESRKWRPIQSFVALTDTPDKDMGGFECVPGFHLEFNEWAKTRPPEPRADGSSVPPPCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQWVGPVKMEDAPDYEFSSLGRCLAACYTALSNRALQAVALSRALSQEQRPLC 404
BLAST of jgi.p|Trimin1|354047 vs. uniprot
Match: A0A8K1CRJ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRJ9_PYTOL) HSP 1 Score: 293 bits (750), Expect = 2.290e-93 Identity = 157/363 (43.25%), Postives = 212/363 (58.40%), Query Frame = 1
Query: 61 EVEEFIEKGVLVVDNILSTAELAAAREGLHDTLRSHGCHSDDLMGTGGALSRLSSTHGSGGILDIFYPPWKLKVCENERLFGAMRDLWRCTYGARHPHFSHPYTEDMDADTGYMYIDRVGYRVDCITPRAKAALGSRVPDAVSAHXXXXXXXXXXXXXXXXXXXXQRPLQRSLTPHLDCCPHKMAEASSSRAESRKWRPIQSFVALTDTPDKDMGGFECVPGFHLEFNEWAKTRPPEPRADGSSVPPPCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQW---VGPVKMEDAPD-YEFSSLGRCLAACY 1137
++ EF+EKGVLVV N+L+ E+A AR+GLH+ L +G +DL TG L +LSST G+GGILD+FYP W+LKV ENER+F AM DLW TY HP F HP+ E + GYMYI+RV YRV PD +S RP+QRSLTPH+DCCP + E+ E +WRPIQ LT + + GGFECVPGFH EF ++ + + D + PP C+GDF+PLR + D +V+ R I AG +F+D RLPHAN+ ++ + R V+YTGFLP PMN +Y ++QL YR ++P D W +G ++E+ + FS++G L Y
Sbjct: 20 QINEFLEKGVLVVPNVLTPEEVAEARQGLHNELAKYGVDHEDLENTGHNLKKLSSTGGAGGILDLFYPSWRLKVAENERVFTAMTDLWSATYACNHPDFEHPFGE-FNGKHGYMYINRVCYRV---------------PDKISQ---------------MHGAKKSRPMQRSLTPHVDCCPTSLFESGK---EIPRWRPIQCITVLTSNNEPNTGGFECVPGFHKEFKDYFAEK--DRSNDTADRPPVCLGDFSPLRMQEDRDVISRYQHINCEAGSVIFFDWRLPHANSYKHTGSIPREVIYTGFLPRVPMNEQYAEEQLRRYRGRLLPADHWQKALGDQEVEEQYSAHHFSAVGARLIGLY 346
BLAST of jgi.p|Trimin1|354047 vs. uniprot
Match: K3W538_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W538_GLOUD) HSP 1 Score: 288 bits (737), Expect = 4.150e-91 Identity = 158/363 (43.53%), Postives = 207/363 (57.02%), Query Frame = 1
Query: 61 EVEEFIEKGVLVVDNILSTAELAAAREGLHDTLRSHGCHSDDLMGTGGALSRLSSTHGSGGILDIFYPPWKLKVCENERLFGAMRDLWRCTYGARHPHFSHPYTEDMDADTGYMYIDRVGYRVDCITPRAKAALGSRVPDAVSAHXXXXXXXXXXXXXXXXXXXXQRPLQRSLTPHLDCCPHKMAEASSSRAESRKWRPIQSFVALTDTPDKDMGGFECVPGFHLEFNEWAKTRPPEPRADGSSVPPPCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQWV---GPVKMEDA-PDYEFSSLGRCLAACY 1137
++++F+ GV+VV N+LS E+AAAR GLHD L +G DL TG L +LSST G+GGILD+FYP W+LKV EN+++F AM DLW TY HP F HP+ D D G+MYI+RV YRV PDA+S RP+QRSLTPHLDCCP + +S + +WRPIQ LTD + + GGFE VPGFH EF + + S P C+GDF+PLR + D EV+ R I AG +F+D R+PHAN+ ++ A R VVYTGFLP PMN +Y+Q+QL YR ++P D W G ++++ + FSSLG L Y
Sbjct: 40 QIDDFMRDGVVVVPNVLSPEEIAAARTGLHDELAKYGVDPQDLETTGHNLKKLSSTGGAGGILDLFYPSWRLKVAENDKVFAAMTDLWSATYAKNHPDFKHPHG-DFDGKQGFMYINRVCYRV---------------PDAISK---------------LHGAKKSRPMQRSLTPHLDCCP---TDPFNSGKDIPRWRPIQCITVLTDNLEANTGGFEAVPGFHKEFEAYFANQAQRALERESDRPQVCLGDFSPLRMQEDREVISRYEHINCTAGSVIFFDWRIPHANSYKHTGAIPREVVYTGFLPNVPMNAQYIQEQLRRYRLRLLPADHWQKSQGDKRVDEHFSAHHFSSLGSRLIGLY 368
BLAST of jgi.p|Trimin1|354047 vs. uniprot
Match: H3H8S5_PHYRM (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8S5_PHYRM) HSP 1 Score: 294 bits (753), Expect = 2.370e-90 Identity = 165/373 (44.24%), Postives = 211/373 (56.57%), Query Frame = 1
Query: 61 EVEEFIEKGVLVVDNILSTAELAAAREGLHDTLRSHGCHSDDLMGTGGALSRLSSTHGSGGILDIFYPPWKLKVCENERLFGAMRDLWRCTYGARHPHFSHPYTEDMDADTGYMYIDRVGYRVDCITPRAKAALGSRVPDAVSAHXXXXXXXXXXXXXXXXXXXXQRPLQRSLTPHLDCCPHKMAEASSSRAESRKWRPIQSFVALTDTPDKDMGGFECVPGFHLEFNEWAKTRPPE-----PRADGSSVPPPCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQW----VGPVKMEDAPDYEFSSLGRCLAACYTALSN 1152
+V++F+E+GVLVV N+L+ E+A AR GLH L +G L TG L +LSST G+GGILD+FYP W+LKV E+E++F AM DLW TY HP F HP+ D D GYMYI+RV YRV PDA+S RP+QRSLTPH DCCP KM ++ ++ +WRPIQ LT + + GGFE VPGFH EF E+A PE P P C+GDF+PLR + D EV+ R I AG +F+D R+PHAN+ ++ + R VVYTGF+P TPMNRRYVQ+QL Y+ ++P D W V ED + FSSLG L A + N
Sbjct: 36 QVQQFMEQGVLVVPNVLTPQEVAEARRGLHGELAKYGVDHKSLETTGDNLKKLSSTGGAGGILDLFYPSWRLKVAEHEKVFAAMTDLWEATYAHNHPDFQHPFG-DFDGKRGYMYINRVCYRV---------------PDAISKKFAQKK---------------SRPMQRSLTPHWDCCPTKMFDSGK---DTPRWRPIQCITVLTSNTEPNTGGFEAVPGFHKEFVEYAAKHMPEVLTAVPLTAPVRRPQVCLGDFSPLRMQEDREVIDRYQHIGCEAGSVIFFDWRIPHANSYKHVGSIPREVVYTGFIPDTPMNRRYVQEQLRRYKARLLPADHWQKDDVHARVAEDFSAHHFSSLGSRLIALHPCPDN 374
BLAST of jgi.p|Trimin1|354047 vs. uniprot
Match: A0A225V950_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V950_9STRA) HSP 1 Score: 285 bits (728), Expect = 2.740e-90 Identity = 157/363 (43.25%), Postives = 206/363 (56.75%), Query Frame = 1
Query: 76 IEKGVLVVDNILSTAELAAAREGLHDTLRSHGCHSDDLMGTGGALSRLSSTHGSGGILDIFYPPWKLKVCENERLFGAMRDLWRCTYGARHPHFSHPYTEDMDADTGYMYIDRVGYRVDCITPRAKAALGSRVPDAVSAHXXXXXXXXXXXXXXXXXXXXQRPLQRSLTPHLDCCPHKMAEASSSRAESRKWRPIQSFVALTDTPDKDMGGFECVPGFHLEFNEWAKTRPPE-----PRADGSSVPPPCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQW----VGPVKMEDAPDYEFSSLGRCLAACY 1137
+E GVLVV N+L+ E+A AR GLH L +G ++L TG +L +LSST G+GGILD+FYP W+LKV E+E++F AM DLW TY HP F HP+ D D GYMYI+RV YRV PDA+S RP+QRSLTPH DCCP KM E+ + +WRPIQ LT+ + + GGFECVPGFH EF ++ PE P P C+GDF+PLR + ++ R I AG +F+D R+PHAN+ ++ A R V+YTGF+P TPMNR YVQ+QL Y++ ++P D W V ED ++FS+LG L A +
Sbjct: 1 MESGVLVVPNVLTAQEVAEARRGLHQELFKYGVDHENLEETGESLKKLSSTGGAGGILDLFYPSWRLKVAEHEKVFAAMTDLWEATYAHNHPDFQHPFG-DFDGKRGYMYINRVCYRV---------------PDAISKKFAKKK---------------SRPMQRSLTPHWDCCPTKMFESGK---DIPRWRPIQCITVLTNNTEPNTGGFECVPGFHKEFADYVAEHQPEAVTTTPLTAPVRRPQVCLGDFSPLRMQEGRAIIDRYQHIGCVAGSVIFFDWRIPHANSYKHVGAIPREVIYTGFIPDTPMNRTYVQEQLRRYKKRLLPADHWQKDDVEAHVAEDFSTHQFSALGSRLIALH 329
BLAST of jgi.p|Trimin1|354047 vs. uniprot
Match: G5A1M9_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A1M9_PHYSP) HSP 1 Score: 283 bits (724), Expect = 1.100e-89 Identity = 157/363 (43.25%), Postives = 204/363 (56.20%), Query Frame = 1
Query: 76 IEKGVLVVDNILSTAELAAAREGLHDTLRSHGCHSDDLMGTGGALSRLSSTHGSGGILDIFYPPWKLKVCENERLFGAMRDLWRCTYGARHPHFSHPYTEDMDADTGYMYIDRVGYRVDCITPRAKAALGSRVPDAVSAHXXXXXXXXXXXXXXXXXXXXQRPLQRSLTPHLDCCPHKMAEASSSRAESRKWRPIQSFVALTDTPDKDMGGFECVPGFHLEFNEWAKTRPPEPRADGSSVPP-----PCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQW----VGPVKMEDAPDYEFSSLGRCLAACY 1137
+++GVLVV N+L+ ++A AR GLH L +G D+L TG L +LSST G+GGILD+FYP W+LKV E+ER+F AM DLW TY HP F HP+ D D GYMYI+RV YRV PDA+S RP+QRSLTPH DCCP M ++ ++ +WRPIQ LTD +++ GGFE VPGFH EF E+A PE A P C+GDF+PLR + D V+ R I AG +F+D R+PHAN+ ++ R V+YTGF+P TPMN YVQ+QL Y+ ++P D W V ED + FS+LG L A +
Sbjct: 1 MDRGVLVVPNVLTREDVAEARRGLHGELTKYGVDHDNLEETGDNLKKLSSTGGAGGILDLFYPSWRLKVAEHERVFAAMTDLWEATYAHNHPDFQHPFG-DFDGKRGYMYINRVCYRV---------------PDAISKKFAAKK---------------SRPMQRSLTPHWDCCPTNMFDSGK---DTPRWRPIQCITVLTDNTERNTGGFEAVPGFHKEFAEYAAKNQPEAVAAAPLTAPLRRPQVCLGDFSPLRMQEDRAVIDRYQHIGCTAGSVIFFDWRIPHANSYKHVGTIPREVIYTGFIPDTPMNCEYVQEQLRRYKSRLLPADHWQKDDVDARVAEDYSAHHFSALGSRLIALH 329
BLAST of jgi.p|Trimin1|354047 vs. uniprot
Match: A0A3M6VT44_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VT44_9STRA) HSP 1 Score: 283 bits (723), Expect = 3.640e-89 Identity = 155/369 (42.01%), Postives = 209/369 (56.64%), Query Frame = 1
Query: 61 EVEEFIEKGVLVVDNILSTAELAAAREGLHDTLRSHGCHSDDLMGTGGALSRLSSTHGSGGILDIFYPPWKLKVCENERLFGAMRDLWRCTYGARHPHFSHPYTEDMDADTGYMYIDRVGYRVDCITPRAKAALGSRVPDAVSAHXXXXXXXXXXXXXXXXXXXXQRPLQRSLTPHLDCCPHKMAEASSSRAESRKWRPIQSFVALTDTPDKDMGGFECVPGFHLEFNEWAKTRPPEPRADGSSVPP-----PCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQW----VGPVKMEDAPDYEFSSLGRCLAACYT 1140
++++F+++GVLVV N+L+ E+A +R+GLH L +G D+L+ TG L +LSST G+GGILD+FYP W+LKV E+E +F AM DLW+ TY H F HP+ + D GYMYI+RV YRV PD +S RP+QRSLTPH DCCP KM S + +WRPIQ LT D + GGFE VPGFH EF +A R A+ + P C+GDF+PLR + D V+ R I AG +F+D R+PHAN+ ++ R V+YTGF+P TPMNR YVQ+QL Y++ ++P D W V ED + FS+LG L A ++
Sbjct: 23 QIQQFMDQGVLVVPNVLTPNEVAESRQGLHRELAKYGVDHDNLIETGDNLKKLSSTGGAGGILDLFYPSWRLKVAEHENIFAAMTDLWQATYAHNHSDFQHPFG-NFDGKRGYMYINRVCYRV---------------PDTISKKFAAKK---------------SRPMQRSLTPHWDCCPTKMFRFDKS---TPRWRPIQCITVLTSNTDPNTGGFEAVPGFHKEFAAYAAERQSYTVAEAAMTAPLHRPQVCLGDFSPLRMQEDRAVIDRYQHIGCEAGSVIFFDWRIPHANSYKHVGTIPREVIYTGFIPDTPMNRTYVQEQLRRYKKRLLPTDHWQKDDVNVCVSEDYSAHHFSALGSRLIALHS 357
BLAST of jgi.p|Trimin1|354047 vs. uniprot
Match: W2QSI3_PHYPN (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QSI3_PHYPN) HSP 1 Score: 283 bits (724), Expect = 3.860e-89 Identity = 153/361 (42.38%), Postives = 202/361 (55.96%), Query Frame = 1
Query: 61 EVEEFIEKGVLVVDNILSTAELAAAREGLHDTLRSHGCHSDDLMGTGGALSRLSSTHGSGGILDIFYPPWKLKVCENERLFGAMRDLWRCTYGARHPHFSHPYTEDMDADTGYMYIDRVGYRVDCITPRAKAALGSRVPDAVSAHXXXXXXXXXXXXXXXXXXXXQRPLQRSLTPHLDCCPHKMAEASSSRAESRKWRPIQSFVALTDTPDKDMGGFECVPGFHLEFNEWAKTRPPE-----PRADGSSVPPPCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQW----VGPVKMEDAPDYEFSSLG 1116
++++F+++GVLVV N+L+ E+A AR GLH L +G D+L TG L LSST G+GGILD+FYP W+LKV ENE++F AM DLW TY HP F HP+ D D GYMYI+RV YRV + + A SR P+QRSLTPH DCCP KM ++ ++ +WRPIQ LT + + GGFECVPGFH EF +A PE P P C+GDF+PLR + D ++ R I AG + +D RLPHAN+ ++ R V+YTGF+P P+NR YVQ+QL Y+ ++P D W V ED + FS+LG
Sbjct: 36 QIQQFMDEGVLVVPNVLTPEEVAQARHGLHSELAKYGVDHDNLEETGDNLKNLSSTGGAGGILDLFYPSWRLKVAENEKVFAAMTDLWEATYAHNHPDFLHPFG-DFDGKRGYMYINRVCYRVQDVISKKFAKKKSR------------------------------PMQRSLTPHWDCCPTKMFDSGK---DTPRWRPIQCITVLTSNTESNTGGFECVPGFHKEFAGYAAKNQPETVTEAPLTAALRRPQVCLGDFSPLRMQEDRAIIDRYQHIGCEAGSVILFDWRLPHANSYKHVGTIPREVIYTGFIPDIPINRSYVQEQLRRYKARLLPADHWQKDDVHSRVAEDFSAHHFSALG 362
BLAST of jgi.p|Trimin1|354047 vs. uniprot
Match: A0A7S2D5I1_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D5I1_9STRA) HSP 1 Score: 284 bits (727), Expect = 4.180e-88 Identity = 162/350 (46.29%), Postives = 204/350 (58.29%), Query Frame = 1
Query: 40 NHDDVVLEVEE---FIEKGVLVVDNILSTAELAAAREGLHDTLRSHGCHSDDLMGTGGALSRLSSTHGSGGILDIFYPPWKLKVCENERLFGAMRDLWRCTYGAR---HPHFSHPYTEDMDADTGYMYIDRVGYRVDCITPRAKAALGSRV-PDAVSAHXXXXXXXXXXXXXXXXXXXXQRPLQRSLTPHLDCCPHKMAEASSSRAESR--KWRPIQSFVALTDTPDKDMGGFECVPGFHLEFNEWAKTRPPEPRADGSSVPPPCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQW 1062
N D + L E+ F GVLVV +L+ E+A AR GLH LRS+G ++L T L LSST+GSGG+L+++YPP+KL + E+ +L+ + LW TY R HPHF H Y D + GY+Y+DRVG+RV P A A +RV P+A PLQRSLTPHLDCCP + S+ R KWRPIQ VALTDT + D GGFE GFH EF+EWA TRPP+ A+G P CVG+FTP+RP+ DA VL R+ +P AG V WD R PHANA+ N A AR V Y G+LP P+NR Y QL Y++ + P DQW
Sbjct: 91 NDDALELSPEQLATFERDGVLVVPGVLTPEEVAEARRGLHGELRSYGVDPENLDETAHHLRPLSSTNGSGGVLNVYYPPFKLLLNEHPKLWSVVTQLWERTYAKRDPPHPHFEHGYGP-FDPNRGYIYMDRVGFRV----PDAVAEAHARVDPNAKKKRKRPL------------------PLQRSLTPHLDCCPSSIYSPDGSQGGKRVVKWRPIQCLVALTDTLEADHGGFEAARGFHREFDEWASTRPPQ--ANGGDAP--CVGEFTPIRPKEDARVLARIEHVPCTAGSLVLWDWRTPHANARYNRGACAREVAYLGYLPDVPLNRAYAAAQLRAYQQGMDPDDQW 413
BLAST of jgi.p|Trimin1|354047 vs. uniprot
Match: M4B5S7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5S7_HYAAE) HSP 1 Score: 276 bits (705), Expect = 2.030e-86 Identity = 156/370 (42.16%), Postives = 209/370 (56.49%), Query Frame = 1
Query: 61 EVEEFIEKGVLVVDNILSTAELAAAREGLHDTLRSHGCHSDDLMGTGGALSRLSSTHGSGGILDIFYPPWKLKVCENERLFGAMRDLWRCTYGARHPHFSHPYTEDMDADTGYMYIDRVGYRVDCITPRAKAALGSRVPDAVSAHXXXXXXXXXXXXXXXXXXXXQRPLQRSLTPHLDCCPHKMAEASSSRAESRKWRPIQSFVALTDTPDKDMGGFECVPGFHLEFNEWAKTRPP----EPRADGSSV---PPPCVGDFTPLRPRGDAEVLKRVVPIPVRAGGAVFWDVRLPHANAQRNGAAAARAVVYTGFLPCTPMNRRYVQKQLHDYRRSVIPQDQW----VGPVKMEDAPDYEFSSLGRCLAACY 1137
+++EFI++GVLVV N+L++ E+A AR+GLH+ L +G ++L TG L +LSST G+GGILD+FYP W+LKV E+E++F AM DLW+ TY HP F HP+ ++ GYMYI+RV YR+ PDA+S RP+QRSLTPH DCCP KM E+ S +WRPIQ LT+ GGFE VPGFH EF +A TR E + S+ P C+GDF+PLR + D V+ R I AG +F+D R+PHAN+ ++ R V+YTGFLP T MNR Y Q+QL Y+ +P D W + E+ + FS+LG L Y
Sbjct: 23 QIQEFIQQGVLVVPNVLTSGEVAEARQGLHNELAKYGVDHENLPETGENLKKLSSTGGAGGILDLFYPSWRLKVAEHEKVFAAMTDLWQATYAQIHPDFQHPFGA-FNSKQGYMYINRVCYRL---------------PDALSTKFAATKK--------------SRPMQRSLTPHWDCCPSKMYESGKSIP---RWRPIQCITVLTNNTKPSTGGFEAVPGFHKEFAAYAATRQELDTVENKTSSSTSSCRPQVCLGDFSPLRMQEDRAVIDRYRHIGCEAGSVIFFDWRIPHANSYKHIGTIPREVIYTGFLPDTAMNRSYAQEQLRRYKARFLPSDHWQKDDLDARVSENYSVHSFSALGSRLIGLY 359 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354047 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17321 ID=mRNA_17321|Name=jgi.p|Trimin1|354047|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1215bp|location=Sequence derived from alignment at Contig_205:156395..163211- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGAGCACGGTCACAATTTCGACTGCAATGGCGCTGGCAATCATGATGAback to top protein sequence of jgi.p|Trimin1|354047 >Trimin1|354047|estExt_Genemark1.C_Ctg_2050014 ID=Trimin1|354047|estExt_Genemark1.C_Ctg_2050014|Name=jgi.p|Trimin1|354047|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=405bp MEHGHNFDCNGAGNHDDVVLEVEEFIEKGVLVVDNILSTAELAAAREGLHback to top mRNA from alignment at Contig_205:156395..163211- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17321 ID=mRNA_17321|Name=jgi.p|Trimin1|354047|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6817bp|location=Sequence derived from alignment at Contig_205:156395..163211- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_205:156395..163211- >mRNA_17321 ID=mRNA_17321|Name=jgi.p|Trimin1|354047|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1215bp|location=Sequence derived from alignment at Contig_205:156395..163211- (Tribonema minus UTEX_B_3156 )back to top |