mRNA_1731 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|64619
Unique NamemRNA_1731
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|64619 vs. uniprot
Match: A0A835YXR2_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR2_9STRA)

HSP 1 Score: 571 bits (1471), Expect = 6.880e-205
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 1
Query:   37 MKLALYACCVGPALAFVARPPASSTSTGARATSTQLDARKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQNAASGALMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYKKA 903
            MKLALYACCVGPALAFVARPPASSTSTGARATSTQLDARKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQNAASGALMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYKKA
Sbjct:    1 MKLALYACCVGPALAFVARPPASSTSTGARATSTQLDARKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQNAASGALMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYKKA 289          
BLAST of jgi.p|Trimin1|64619 vs. uniprot
Match: A0A7S4D8V7_HETAK (Triosephosphate isomerase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8V7_HETAK)

HSP 1 Score: 335 bits (859), Expect = 5.080e-111
Identity = 166/255 (65.10%), Postives = 204/255 (80.00%), Query Frame = 1
Query:  142 LDARKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQNAASGA-LMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYKKA 903
            L AR+P++AGNWK NPCT++EA ALA+ VA A     D  VV+ P +PFLVPV     G+ + +G QNCY E+KGA+TG+VST M+ S+G  YVL GHSERRT+FR+DD AINRK++ VL   M PILCIGE K+E++ GL + VCA+QL+KDL+GVT EEM+R+V+AYEPVWAIGTGLTATPEIAQ VH +IRG++A  Y + VADEV IQYGGSVTP++VD LMA PDIDGALVGGASLD  KFGRI+N+K A
Sbjct:   84 LMARQPIMAGNWKMNPCTLEEAAALAAGVA-ANPIENDAEVVLFPSHPFLVPVMEKIDGSQVKLGAQNCYTEDKGAFTGSVSTCMVKSIGVEYVLAGHSERRTLFRDDDGAINRKVKKVLSAGMKPILCIGELKDEFEEGLVEQVCALQLAKDLRGVTAEEMRRVVIAYEPVWAIGTGLTATPEIAQKVHAFIRGWIAGKYGKAVADEVRIQYGGSVTPETVDELMAQPDIDGALVGGASLDAEKFGRIMNFKTA 337          
BLAST of jgi.p|Trimin1|64619 vs. uniprot
Match: A0A835ZJI0_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJI0_9STRA)

HSP 1 Score: 321 bits (823), Expect = 7.920e-107
Identity = 161/251 (64.14%), Postives = 193/251 (76.89%), Query Frame = 1
Query:  148 ARKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQNAASGA-LMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYK 897
            AR P+I GNWK NP  +  A  LA++VA  TK    V V +IPPYPF+ PV++A  G+ + +G QN + E+KGA+TGAVST ML SVGC YVLCGHSERRT+F+ D+  IN K+  VL  NM PILCIGESKEEY++GLNK VCA+QL K+L GVT E+MK +V+AYEPVWAIGTGL ATPE+AQSVH YIR +LA  Y + VAD+V IQYGGSVTP+SVD LMA PDIDGALVGGASL   KF RI  ++
Sbjct:    3 ARTPIITGNWKMNPGDMASAVQLAADVAAQTKGLEGVEVGIIPPYPFVPPVRDALKGSGITVGAQNAFVEDKGAFTGAVSTTMLLSVGCEYVLCGHSERRTIFKEDNALINSKVLKVLSKNMRPILCIGESKEEYESGLNKEVCAVQLGKNLAGVTAEQMKDVVIAYEPVWAIGTGLVATPEVAQSVHAYIRSWLAGKYGQAVADDVRIQYGGSVTPESVDDLMACPDIDGALVGGASLVADKFARICRFQ 253          
BLAST of jgi.p|Trimin1|64619 vs. uniprot
Match: A0A7S2XYZ2_9STRA (Triosephosphate isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYZ2_9STRA)

HSP 1 Score: 322 bits (825), Expect = 1.390e-106
Identity = 171/295 (57.97%), Postives = 211/295 (71.53%), Query Frame = 1
Query:   37 MKLALYACCVGPAL-----AFVARPPASSTSTGARATSTQLDA--RKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQNAASGALM-IGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYK 897
            MK  + AC  G A+     AF   P    + T A  +STQL    R P I GNWK NP T++EA+ALA  V      +    V +  P+PFL PV     G+ +  GG+  +FE+KGAYTGAVS +ML +VGC YVL GHSERR +F+ DD+AI+RK+R +LD  M P+LCIGES+EEY+A LNK +C IQL+KDL GV+ EEMK + +AYEPVWAIGTGLTATPEIAQ+VH YIR ++A  Y +EVADEV IQYGGSVTP++VD LMA PDIDGALVGGASLD AKF RI+N++
Sbjct:    1 MKGLVLACLTGAAVISTVSAFFGSP---LSYTSAMRSSTQLSMADRVPFICGNWKMNPTTLEEAKALAEGVKSGCDGSA-AEVAIFTPHPFLYPVGKILDGSTVKYGGETVFFEDKGAYTGAVSASMLKTVGCEYVLAGHSERRVLFKTDDSAISRKVRKILDSGMKPVLCIGESREEYEANLNKEICCIQLAKDLAGVSAEEMKLVTIAYEPVWAIGTGLTATPEIAQNVHAYIRSWVAGKYGQEVADEVRIQYGGSVTPETVDELMACPDIDGALVGGASLDAAKFSRIVNFE 291          
BLAST of jgi.p|Trimin1|64619 vs. uniprot
Match: A0A7S2UU88_9STRA (Triosephosphate isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU88_9STRA)

HSP 1 Score: 318 bits (815), Expect = 9.190e-106
Identity = 161/244 (65.98%), Postives = 189/244 (77.46%), Query Frame = 1
Query:  169 GNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQNAASGA-LMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYK 897
            GNWK NP T+ EA ALA  V E  K      V+VIPP PFLVPV +   G+ + +GGQN +FE+KGAYTGAVST ML SVG  YVL GHSERRT+FR+DD++INRK+R +L+  + PILCIGE+KEEYD GL + VC +Q+SKDL  VT E+MK IV+AYEPVWAIGTGLTATPEIAQSVH YIR  +AK +  EVA+ V IQYGGSVTP++VD LMA PDIDGALVGGASL   KFGRI  Y+
Sbjct:    1 GNWKMNPETLDEAVALAKGVVEQVKDGASGEVIVIPPSPFLVPVADIIKGSGVQLGGQNAFFEDKGAYTGAVSTCMLKSVGAKYVLAGHSERRTLFRDDDSSINRKVRKILEAGLKPILCIGETKEEYDQGLVELVCGLQISKDLADVTAEQMKDIVIAYEPVWAIGTGLTATPEIAQSVHKYIRSCIAKKFGDEVAEGVRIQYGGSVTPETVDELMACPDIDGALVGGASLVADKFGRICKYQ 244          
BLAST of jgi.p|Trimin1|64619 vs. uniprot
Match: A0A4D9CPZ8_9STRA (Triosephosphate isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPZ8_9STRA)

HSP 1 Score: 309 bits (792), Expect = 1.950e-101
Identity = 151/253 (59.68%), Postives = 191/253 (75.49%), Query Frame = 1
Query:  142 LDARKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQNAASGA-LMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYK 897
            +  R+P IAGNWKENP T++ A  LA  V+ A+  A +V V V+ P+PFLVPV+    G+ ++IG Q+ Y E+KGAYTGA S  M+ SVG  +VLCGHSERR +F + D  +N KL+ VL   +  ILCIGE+K+EY+ G+NK +C +QL+K LKGVT E+M+ + +AYEPVWAIGTGLTATPEIAQ VH  IR  L + Y + VAD+V+IQYGGSVTP++VD LMAMPDIDGALVGGASL G KF RIIN+K
Sbjct:   50 MSGRRPFIAGNWKENPDTLEAAIDLAKVVSTASSSASNVDVAVVVPFPFLVPVKETLKGSNVLIGAQDLYTEDKGAYTGATSLPMIKSVGAQWVLCGHSERRALFGDTDETVNAKLKKVLAAGLKAILCIGETKDEYELGVNKLICGLQLAKGLKGVTKEQMENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPETVDELMAMPDIDGALVGGASLVGEKFARIINFK 302          
BLAST of jgi.p|Trimin1|64619 vs. uniprot
Match: A0A6S9FXW6_HETAK (Triosephosphate isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FXW6_HETAK)

HSP 1 Score: 303 bits (776), Expect = 4.670e-99
Identity = 146/254 (57.48%), Postives = 194/254 (76.38%), Query Frame = 1
Query:  145 DARKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQNAASGA-LMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYKKA 903
            D R+P IAGNWK NP +++EA+ LA++VAE TK+  +V + V  P+PF+ PV     G+ +++G +  + E+KGAYTGAVS  M+ S+G  +VL GHSERR +F  DD+++NR++  +L+  M  ILCIGES+ EYDAGLN+ +C +QL+KDLK VT E+MK +V+AYEPVWAIGTGLTATPEIAQ+VH  IR ++AK +  ++A E  IQYGGSVTP++VD LMA PDIDGALVGGASLD  KF RI N++ A
Sbjct:   43 DGRRPFIAGNWKMNPTSLEEAKTLAAKVAELTKENTEVEMAVFAPHPFIYPVAKELEGSNVVVGAETIFTEDKGAYTGAVSATMVKSMGGKWVLAGHSERRVLFNTDDDSVNRQVLKILNRGMGCILCIGESQAEYDAGLNQEICTVQLAKDLKDVTPEQMKNVVIAYEPVWAIGTGLTATPEIAQNVHASIRAWVAKKFGEQIAKETRIQYGGSVTPETVDELMACPDIDGALVGGASLDAEKFARICNFEMA 296          
BLAST of jgi.p|Trimin1|64619 vs. uniprot
Match: L1ILQ4_GUITC (Triosephosphate isomerase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1ILQ4_GUITC)

HSP 1 Score: 296 bits (758), Expect = 5.130e-97
Identity = 145/253 (57.31%), Postives = 186/253 (73.52%), Query Frame = 1
Query:  142 LDARKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQ-NAASGALMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYK 897
            + AR P IAGNWK NP +V+EA +LA  +A+  K +    V +  P+PFL   + +   G + +G Q CYFE+KGAYTGA ST+M+ SVG  +V+ GHSERRTVF   D  +N+ +  VL  NM+PILC+GE+KEEY++GLN  +CAIQL+K LKGV+ E+ K++ +AYEPVWAIGTGL     +AQ VH +IRG+LA MY +E AD + IQYGGSVTPDSVD LM+ PDIDG LVGGASLD AKF RI+N+K
Sbjct:    1 MAARVPFIAGNWKMNPTSVEEAISLAKAIADG-KGSSKAQVAICTPHPFLAACKPHLDKGGIDLGAQACYFEQKGAYTGATSTSMIRSVGAKHVIVGHSERRTVFHQTDEMVNQIIHKVLADNMLPILCVGETKEEYESGLNTQICAIQLAKGLKGVSKEDAKKVTIAYEPVWAIGTGLVCDASVAQDVHKFIRGWLANMYDQETADTIRIQYGGSVTPDSVDELMSKPDIDGCLVGGASLDPAKFTRIMNFK 252          
BLAST of jgi.p|Trimin1|64619 vs. uniprot
Match: A0A6S8WKX7_9STRA (Triosephosphate isomerase n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8WKX7_9STRA)

HSP 1 Score: 297 bits (761), Expect = 1.380e-96
Identity = 158/283 (55.83%), Postives = 199/283 (70.32%), Query Frame = 1
Query:   76 LAFVARPPASSTSTGARATSTQLDARKPLIAGNWKENPCTVQEAEALASEVAE-------ATKQAGD-VGVVVIPPYPFLVPVQNAASGA-LMIGGQNCYFE-EKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINY 894
            LA    P A+   T A  T+TQL AR+P+IAGNWK NP ++QEA+ LA  VA        A+  A D   VVV PP+PF+  V +  +G  + +G Q+ +   E GAYTGAVS +M++S+GC YVLCGHSERRTVF++DD AIN+K+  V++  M P+LCIGE++EEYDAGL   VC +QL+KDL GV+   MK +V+AYEPVWAIGTG     ++AQ+VH  IR YLA++Y R  AD V IQYGGSVTP+SVD LMA PDIDG LVGGASL   KF RI N+
Sbjct:   28 LALALAPAAAFAPTAAPRTTTQLHARQPIIAGNWKLNPSSIQEADGLAKGVASLLGDETCASSSAADCTEVVVFPPFPFISSVVDDLAGVGVGVGAQSIFHTAESGAYTGAVSASMVTSLGCQYVLCGHSERRTVFKDDDEAINKKVLKVIEDGMRPVLCIGETEEEYDAGLCADVCKLQLAKDLAGVSAAAMKDVVIAYEPVWAIGTGKVCPCDVAQTVHKTIRDYLAELYDRSTADAVRIQYGGSVTPESVDELMAQPDIDGCLVGGASLVAEKFARICNF 310          
BLAST of jgi.p|Trimin1|64619 vs. uniprot
Match: A0A7S4A1D2_9STRA (Triosephosphate isomerase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A1D2_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.410e-96
Identity = 146/255 (57.25%), Postives = 189/255 (74.12%), Query Frame = 1
Query:  133 STQLDARKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQNAASGA-LMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINY 894
            ST L AR+P+  GNWK NP ++ +A  LA  VA A   +   G+V  PPYPF+ PV        L +G Q+ +FE+KGAYTGAVS +M+ S+G  YVL GHSERRT+F+++D AIN+K+  +++  M+P+LCIGE+KEE+DA L ++VCAIQL+KDL GV+  ++K +++AYEPVWAIGTGL    E AQ VH ++R  LA MY +  AD V IQYGGSVTPDSVD LM+MPDIDG LVGGASLDG KFGRI+N+
Sbjct:   28 STALAARQPITGGNWKMNPTSLDDARELAKSVAAAAGSSAAEGIV-FPPYPFIGPVGEIIKDTKLNLGSQSIFFEDKGAYTGAVSASMVKSLGVKYVLAGHSERRTLFKDNDAAINKKVLKIIEGGMIPVLCIGETKEEFDANLCESVCAIQLAKDLAGVSAADVKTMIIAYEPVWAIGTGLVCPSETAQKVHKFLRAKLASMYDQATADAVRIQYGGSVTPDSVDELMSMPDIDGCLVGGASLDGEKFGRILNF 281          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|64619 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXR2_9STRA6.880e-205100.00Triosephosphate isomerase n=1 Tax=Tribonema minus ... [more]
A0A7S4D8V7_HETAK5.080e-11165.10Triosephosphate isomerase n=3 Tax=Heterosigma akas... [more]
A0A835ZJI0_9STRA7.920e-10764.14Triosephosphate isomerase n=1 Tax=Tribonema minus ... [more]
A0A7S2XYZ2_9STRA1.390e-10657.97Triosephosphate isomerase n=1 Tax=Fibrocapsa japon... [more]
A0A7S2UU88_9STRA9.190e-10665.98Triosephosphate isomerase n=1 Tax=Fibrocapsa japon... [more]
A0A4D9CPZ8_9STRA1.950e-10159.68Triosephosphate isomerase n=1 Tax=Nannochloropsis ... [more]
A0A6S9FXW6_HETAK4.670e-9957.48Triosephosphate isomerase n=1 Tax=Heterosigma akas... [more]
L1ILQ4_GUITC5.130e-9757.31Triosephosphate isomerase n=2 Tax=Guillardia theta... [more]
A0A6S8WKX7_9STRA1.380e-9655.83Triosephosphate isomerase n=3 Tax=Pelagomonas calc... [more]
A0A7S4A1D2_9STRA1.410e-9657.25Triosephosphate isomerase n=1 Tax=Pelagomonas calc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:1696370..1700961 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|64619|CE64618_871
BRITEko00000,ko00001,ko00002,ko01000,ko04147
KEGG rclassRC00423
KEGG ReactionR01015
KEGG ModuleM00001,M00002,M00003
KEGG Pathwayko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG koko:K01803
EC5.3.1.1
GOsGO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616
Preferred nameTPI3
Descriptiontriosephosphate isomerase
COG categoryG
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0149@1|root,KOG1643@2759|Eukaryota
Evalue2.54e-98
Seed ortholog55529.EKX36730
Hectar predicted targeting categorychloroplast
TranscriptId64941
TrackFilteredModels1
ProteinId64619
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|64619gene_1731Tribonema minus UTEX_B_3156 geneContig_4 1696370..1700961 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|64619Trimin1|64619|CE64618_871Tribonema minus UTEX_B_3156 polypeptideContig_4 1696465..1700925 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1731_6exon_1731_6Tribonema minus UTEX_B_3156 exonContig_4 1696370..1696608 -
exon_1731_5exon_1731_5Tribonema minus UTEX_B_3156 exonContig_4 1697361..1697552 -
exon_1731_4exon_1731_4Tribonema minus UTEX_B_3156 exonContig_4 1698993..1699116 -
exon_1731_3exon_1731_3Tribonema minus UTEX_B_3156 exonContig_4 1699900..1700006 -
exon_1731_2exon_1731_2Tribonema minus UTEX_B_3156 exonContig_4 1700208..1700376 -
exon_1731_1exon_1731_1Tribonema minus UTEX_B_3156 exonContig_4 1700792..1700961 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_1731UTR3_1731Tribonema minus UTEX_B_3156 three_prime_UTRContig_4 1696370..1696464 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1731CDS_1731Tribonema minus UTEX_B_3156 CDSContig_4 1700792..1700925 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_1731UTR5_1731Tribonema minus UTEX_B_3156 five_prime_UTRContig_4 1700926..1700961 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1731 ID=mRNA_1731|Name=jgi.p|Trimin1|64619|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1001bp|location=Sequence derived from alignment at Contig_4:1696370..1700961- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTGAAAGCAATACACGGAAGCCAAATTACAGGAGCCATGAAGCTTGCCCT
GTATGCCTGCTGCGTGGGCCCCGCCCTGGCATTCGTTGCCCGGCCCCCGG
CAAGCAGCACCTCGACTGGAGCCCGTGCCACCTCTACCCAGCTCGACGCC
CGCAAACCTCTGATCGCAGGCAACTGGAAAGAAAACCCGTGCACCGTCCA
GGAAGCTGAGGCGCTGGCCAGCGAAGTCGCGGAAGCAACCAAGCAAGCTG
GCGATGTGGGCGTCGTCGTCATTCCTCCCTACCCCTTCCTGGTGCCAGTG
CAGAATGCCGCATCAGGGGCGCTCATGATTGGCGGGCAGAATTGCTACTT
TGAGGAGAAGGGAGCGTACACGGGGGCTGTGTCTACGGCCATGCTGTCGT
CTGTGGGGTGCACGTATGTGCTGTGCGGGCACTCAGAAAGGCGAACCGTC
TTCCGCAATGACGACAACGCCATCAACCGGAAGCTGCGCGCGGTGCTGGA
CCACAACATGATGCCCATCCTGTGCATCGGCGAGAGCAAGGAGGAGTACG
ACGCGGGCCTCAACAAGGCGGTGTGCGCCATCCAGCTGTCCAAGGACCTG
AAGGGCGTGACGGGGGAGGAGATGAAGCGCATTGTGGTGGCGTACGAGCC
CGTGTGGGCCATCGGGACGGGCCTCACGGCGACGCCGGAGATTGCGCAGA
GCGTGCACGACTACATCCGCGGCTACCTGGCCAAGATGTACAGCCGGGAG
GTGGCCGACGAGGTCATCATCCAGTACGGCGGGTCCGTGACGCCCGACTC
CGTTGACGCCCTCATGGCCATGCCCGACATTGACGGCGCGCTCGTGGGTG
GCGCATCGCTCGACGGCGCAAAGTTCGGGCGCATCATCAACTACAAGAAG
GCATAATGCGCGTCGCGGCGCCGCTGCTGCCGTCGTGTGCTCCGGTTCTT
TAGATCAACACACAGAGAAGGGGGGGGGGGGGGGGGGGGGAGAGCGGGGG
G
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protein sequence of jgi.p|Trimin1|64619

>Trimin1|64619|CE64618_871 ID=Trimin1|64619|CE64618_871|Name=jgi.p|Trimin1|64619|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=290bp
MKLALYACCVGPALAFVARPPASSTSTGARATSTQLDARKPLIAGNWKEN
PCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQNAASGALMIGG
QNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKL
RAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIV
VAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGS
VTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYKKA*
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mRNA from alignment at Contig_4:1696370..1700961-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1731 ID=mRNA_1731|Name=jgi.p|Trimin1|64619|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4592bp|location=Sequence derived from alignment at Contig_4:1696370..1700961- (Tribonema minus UTEX_B_3156 )
GTGAAAGCAATACACGGAAGCCAAATTACAGGAGCCATGAAGCTTGCCCT GTATGCCTGCTGCGTGGGCCCCGCCCTGGCATTCGTTGCCCGGCCCCCGG CAAGCAGCACCTCGACTGGAGCCCGTGCCACCTCTACCCAGCTCGACGCC CGCAAACCTCTGATCGCAGGGTGAGTATCATGCGGCTGCCAGCCAGATAC GCTGCGCCTGGCGTTGCTGGCGACGGCAGGATGTCTTGCAACAATATTGA CATCACTGCTGAAGCCTCCAGTGTCGCTTGGTGGCTGTCAATGACATGTT GACGTTGCTGGCAGCTGTCGTCAGCGACCTCGCAGATGAGGAGCACTTTG CAATCACACACGGCGAGGCCTGGTTGGACTGCATTAAGCTAGTTTAAGGT GCTCTGCTAGCACTTAGATGCCACATCAATTGCTCTCGTATATACATTCG ATCGCCACGCCAGTACTGAGTTCAGGATTTGCAACAGGATTCACTGTCGC GTAGAATGCATGCAGCTAGACTTCACAGATGCGGCTGGCAGAGTTGCCGA CACTGCACCACCCTTTATCTGCCCTGCATCCCCAGCAACTGGAAAGAAAA CCCGTGCACCGTCCAGGAAGCTGAGGCGCTGGCCAGCGAAGTCGCGGAAG CAACCAAGCAAGCTGGCGATGTGGGCGTCGTCGTCATTCCTCCCTACCCC TTCCTGGTGCCAGTGCAGAATGCCGCATCAGGGGCGCTCATGATTGGCGG GCAGGTGAACGATGAGCAGCGCTGCCGATGCTGGCCTGCTGCTGCTGCTG TTTGCATCAGATAACTGCGTGTTCACAGGGTGAAGAAGATTCCATGAGCA CCACCCTGCCTGCATGAAGCTGCTTCAGCCTGCAACACCGCGCTACTGCC TCCGATCATCGATTGCTGACGCTGCAGCTGCTGGCGCTTGATTCCTTCGC CGCAGAATTGCTACTTTGAGGAGAAGGGAGCGTACACGGGGGCTGTGTCT ACGGCCATGCTGTCGTCTGTGGGGTGCACGTATGTGCTGTGCGGGCACTC AGAAAGGCGAACGTGAGTGCCGCCGCCGCGTGTTTCAACTGTACAACGAT GCTCGTGGGGTATCGCGCGCACTAGCCAGGTCTGAAAGTGTATGCTGCAG CACAGCAGGCAAGAACCGCAATGAATGTTTTGCACATCGAAGTAAGTTCT CAAGACGTCTTCACCTCGGTGTACAGGAATCTGCCATCGTCGCGTAATTG GCCTGCAGACAGCAACTTTTCTAGATGTCAGGCGCGCAGCATCTCGGTGC ATGCATGTCAGAGCACCGCACACAGTGCCACGCCACAATGCAGCAGCTGC GACACCTGTCGATTGCTGACATCAGTAGTGCGCACCAAATCTTCATGGCC CATCCATCTTTCTACTCTTTTAATCAATGCTATATGTGCTGACAGCAGCG GGCTTCCCGTGCTGCATGAATCAGCGGCTTGATATGACTCTAGAGCGCGG CGTCTGAAGCTGATGGAGGTGCAGTTTACGCGGCAGGGTAGCCATGGGGA CCATGTGACGTTGCGTCTGCAGTCAGCGCACGTGCACGCGCAGTGCCCTG CTGTGCTCAAAGTGCCACTGACAGGATGCTGGTCACCTCAGCATAATGAA CTCTTAGTATCGCTGAAAACAGTTATTACAGTAGGTATACAGGAACCCAG CAGGCTCGATGCCAGGGTATTGGGCTGGAAGTGGAGCGCAGCCGAACAGT ATGAAGTGTTGATCACATGTGGTCCACAGCCCCGTTTGCGCAGGCGTCGC TGACTGCACAGCACGCATACCTACATGCCCCCCGCGCCGCCGCAGCGTCT TCCGCAATGACGACAACGCCATCAACCGGAAGCTGCGCGCGGTGCTGGAC CACAACATGATGCCCATCCTGTGCATCGGCGAGAGCAAGGAGGAGTACGA CGCGGGCCTCAACAAGGCGGTGAGTCACCCACCCCCTAGTGCTATTAAAG TTTAACTTCAACGTGGTGACGTTCCGCACCAGGTGCGCGCTGGCGAACTC GAGAAGAGTTTGCGGAGTCCTTGTGCCGGCGTGACGGACATGGTGTGTGG TGTGTGGCGCGTAGGTTTGCAACAGTTGAAGTTGGCATCCGATCCGGCTT CCGACAGAAGTCTGGGTGCGCTGCGCAGTTGGCCGGCGCTCGGCAACTAG CTTTGATCAAATGATCGATGATGATGTCTTGCGGAAAATCTGCACCAGGC CGGACTTGTTTTGTTTTGAGCCTCGATGACGCCGCAATTGCCGAGTTGCC TTGCAGTTGCGCGACAAAGCGCTTGTGTGAGCTGCCGCTTGTGTGGCCTG TGCACTGAGGTTGTGTGCTCTTTAGAAGGGGAACCTTTTTGACCACACGC GGCAAGCAGCCGCGCTCACCTATCGACACGCCGCATTAGTGTCACTGATC AGACATTCGCGATGCGCTGTCGGACTCTCGCACCGCTGTGCCGGACAACG TATGGCAACAGTGACTGTCAGTCGAAGTGCGCATGCTGGGGAATAGCACC CAACCGCATATAAGCAATGCTCGAAGGCCTCTAGCGGGGGCAGCGGGGGG GGGGGGGGGCGCAATGAGCCATGTTGTGATGGCACTTGGGAACCTGTGTG CGGCGCGGTGGCAACATATGATCTCTCCAACGCGCTTAATTTAGCACTTC TCGAGGAGGGGGCTTCTTGGGGAGGGAGAGGGGGGGGGCTGCTGGAGCGT CACTGCGGCGCATGGGAAACCTCACATGGCAGCTGCGCGATACTCTTGGT GGGGCCGTGCGCTTTGACTGCCATGATTGATGGAGCAGGCAGGCCACGCA GTGGCAGCGGACGCTGTGATGGCGCCGTCGCACGCGCAAGTTGACACGAG CTGCACCATGTGCTGCGGACAACTGCCAGGAGCGGCCAGGCTGCGCCGCC GTCGTGCGGCGGCGGCGGACGCTGTCATGGCGCTGTCGCACGCGCAAATC GAGACGACCTGCGACATTCGCTGCGTGAACAACTGGCAGTTGGTGATCGG GACATTACACGGCGGCGACTGTGCATGTGTGCGGTGGAGCCGCCATTGAC GTGCCCTGCGACGTGCAGCGGCGCAGCGCAGGCAGGAGGAACTTCAATGG GGGCGCGCCGTGGTACGGCCTCAAGGCAGAACCATGCTCTCCTCAAAGTT CAGTAACAAATTGCTGCTCACGTGCCGCTGGCAGGCGCTGGGTGCGCTGT GTCACTTTACCACGACCTCTTTCATAGAACTATTGTAACCTGTTTCGCGT GGCCCTGTCTCCCCATTTCTAATAGAAGTAGAAATTCAATCACCAATCCC AAGAGAAGCCAACCTACCCCCCCCTTGCCCCCCAACTCTAATGCACTACT CCCCCCCAGGTGTGCGCCATCCAGCTGTCCAAGGACCTGAAGGGCGTGAC GGGGGAGGAGATGAAGCGCATTGTGGTGGCGTACGAGCCCGTGTGGGCCA TCGGGACGGGCCTCACGGCGACGCCGGAGATTGCGCAGAGCGTGCACGAC TACATCCGCGGCTACCTGGCCAAGATGTACAGCCGGGAGGTGGCCGACGA GGTGAGCGCGTGTTCACAGCGCTGCAAAGGGCGCACAATCATACCTATGG GTTAGGGTTGGCGGCGGCGCAGTTCAGCAGTGGTGGTGCGGACCGCCGCA GCTCACCATTTGGCGCCAGTGGAGCGTCAACCATTTGAAGCGGCCTGAGC AAGTCGTCCTCAGTGCTGCGCGTCAGCGCTCCGCAGACTGCGTCCACTGC CGCGTGTGCTCTGATGGTTAAGACGCGCAGCACTTCAGGCCTTCCGCATG CGCGCGGGGCGGTGTTTGACGCGCGGTTTGTGGAAGCGTAATTTGTGCGG AGTTTGGAGAGTTAGGCTCGCAGGCAGCAGTTTACCACCGGTCCCCGCAG CACCATTTCACCTGTCTTTTTTTCAAATTCCTCCGCCCTGGTCACGTCAT CGTGCAGTGCGGCGCAACCCGTGGCCCCCTGTTCTGCCAGCAACTTCCGA TAGTACACTACTTCCACATTGTCTGCATGCCTTGCTCACCAAGTCTTAAC AAGCGCACGCGGCGCTCCCCCCCATCGCCCCCAGGTCATCATCTAGCACA GAGGGTCATCCACACTCTCATATATAGTCCGAACGCTTTCTTATTGGTGT TTTGATATGCTTTCAAGCGTAACTCGCCACCTCCATCGTCCAGCACCATC CACTTCGACGCATCAGTCACGCCACCACCACATTGCCCTTCCTCCACTTC ATGTCATGACGCGCGCAACGCGTGACTCACCGCCCCCCCCCCCTCCCCCC CAGGTCATCATCCAGTACGGCGGGTCCGTGACGCCCGACTCCGTTGACGC CCTCATGGCCATGCCCGACATTGACGGCGCGCTCGTGGGTGGCGCATCGC TCGACGGCGCAAAGTTCGGGCGCATCATCAACTACAAGAAGGCATAATGC GCGTCGCGGCGCCGCTGCTGCCGTCGTGTGCTCCGGTTCTTTAGATCAAC ACACAGAGAAGGGGGGGGGGGGGGGGGGGGGAGAGCGGGGGG
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Coding sequence (CDS) from alignment at Contig_4:1696370..1700961-

>mRNA_1731 ID=mRNA_1731|Name=jgi.p|Trimin1|64619|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=870bp|location=Sequence derived from alignment at Contig_4:1696370..1700961- (Tribonema minus UTEX_B_3156 )
ATGAAGCTTGCCCTGTATGCCTGCTGCGTGGGCCCCGCCCTGGCATTCGT
TGCCCGGCCCCCGGCAAGCAGCACCTCGACTGGAGCCCGTGCCACCTCTA
CCCAGCTCGACGCCCGCAAACCTCTGATCGCAGGCAACTGGAAAGAAAAC
CCGTGCACCGTCCAGGAAGCTGAGGCGCTGGCCAGCGAAGTCGCGGAAGC
AACCAAGCAAGCTGGCGATGTGGGCGTCGTCGTCATTCCTCCCTACCCCT
TCCTGGTGCCAGTGCAGAATGCCGCATCAGGGGCGCTCATGATTGGCGGG
CAGAATTGCTACTTTGAGGAGAAGGGAGCGTACACGGGGGCTGTGTCTAC
GGCCATGCTGTCGTCTGTGGGGTGCACGTATGTGCTGTGCGGGCACTCAG
AAAGGCGAACCGTCTTCCGCAATGACGACAACGCCATCAACCGGAAGCTG
CGCGCGGTGCTGGACCACAACATGATGCCCATCCTGTGCATCGGCGAGAG
CAAGGAGGAGTACGACGCGGGCCTCAACAAGGCGGTGTGCGCCATCCAGC
TGTCCAAGGACCTGAAGGGCGTGACGGGGGAGGAGATGAAGCGCATTGTG
GTGGCGTACGAGCCCGTGTGGGCCATCGGGACGGGCCTCACGGCGACGCC
GGAGATTGCGCAGAGCGTGCACGACTACATCCGCGGCTACCTGGCCAAGA
TGTACAGCCGGGAGGTGGCCGACGAGGTCATCATCCAGTACGGCGGGTCC
GTGACGCCCGACTCCGTTGACGCCCTCATGGCCATGCCCGACATTGACGG
CGCGCTCGTGGGTGGCGCATCGCTCGACGGCGCAAAGTTCGGGCGCATCA
TCAACTACAAGAAGGCATAA
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