mRNA_17236 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|35902
Unique NamemRNA_17236
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|35902 vs. uniprot
Match: A0A835Z4B2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B2_9STRA)

HSP 1 Score: 466 bits (1200), Expect = 1.330e-156
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 3 
Query:   54 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 1559
            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
Sbjct:    1 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 502
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BLAST of jgi.p|Trimin1|35902 vs. uniprot
Match: A0A835YK96_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK96_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.420e-51
Identity = 97/132 (73.48%), Postives = 102/132 (77.27%), Query Frame = 3 
Query: 1161 CTVIVSGTTFSGNCYKPADAPANQNLLDAGVGTCTDTTDCAQRCFIPNASTGLCGTNTCSGGEICRCYQKVTGVTGASCKPEDLVGVAEGATVSQGGGCSENACNAITNTQGTGAGCCPTSCSRRTFAELVL 1556
            CTVI+ G  F G C+ P   P  QNLLDAGVGTC +T  C QRCFIPN S GLCGTNTCSGGEICRCY KV GV GASCK  DLV VA GA VS GGGC+ENACNA TN QGT AGCCPTSCSRRTFA+L L
Sbjct:  799 CTVILRGNPFPGTCFIPGQQPTGQNLLDAGVGTCINTPACPQRCFIPNDSQGLCGTNTCSGGEICRCYNKVLGVMGASCKQADLVDVAPGAIVSNGGGCAENACNAATNIQGTAAGCCPTSCSRRTFADLFL 930
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BLAST of jgi.p|Trimin1|35902 vs. uniprot
Match: A0A835ZBN2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBN2_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.620e-37
Identity = 80/137 (58.39%), Postives = 95/137 (69.34%), Query Frame = 3 
Query: 1161 CTVIVSGTTFSGNCYKPADAPANQNLLDAGVGTCTD-TTDCAQRCFIPNASTGLCGTNTCSG-GEICRCYQKVTGVTGASCKPEDLVGVAEGATVSQGGGCSENACNAITNTQGTGAGCCPTS-CSRRTF-AELVLN 1559
            CTV++SG +++GNCY     P NQNL+  GVG+CT    +C Q C+IPN + GLCG NTCS  G  CRCY K T  TGASCKP DL+GV   +TV QGGGC EN CNAIT     GAGCCPTS C+RRT  AEL+ +
Sbjct:   32 CTVLISGVSYTGNCYVRNQQPLNQNLVGGGVGSCTSFLPNCDQLCYIPNDAAGLCGDNTCSSKGYKCRCYLKST--TGASCKPGDLIGVNPASTVDQGGGCQENRCNAITTA--VGAGCCPTSPCARRTLLAELLAD 164
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BLAST of jgi.p|Trimin1|35902 vs. uniprot
Match: A0A835YTT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT6_9STRA)

HSP 1 Score: 142 bits (359), Expect = 6.910e-35
Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 3 
Query: 1143 CISAVPCTVIVSGTTFSGNCYKPADAPANQNLLDAGVGTCTDTTDCAQRCFIPNASTGLCGTNTCSGGEICRCYQKVTGVTGASCKPEDLVGVAEGATVSQGGGCSENACNAITNTQGTGAGCCPTS 1523
            C + V C V V  + +SG CY P   PA+ NLL AG G C  T  CAQ C+I N S GLC ++ CSGG  CRCY+KV G TGA CK ++LVGVA GA +  GGGCSEN CNA+T++  + A CCPTS
Sbjct:  144 CTNGVSCKVTVGTSEYSGLCYIPGQEPADGNLLRAGNGDCPQTAYCAQACYISNTSDGLCASSECSGGNRCRCYKKVAGQTGADCKADELVGVAPGAVIDTGGGCSENNCNALTDSS-SAAACCPTS 269
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BLAST of jgi.p|Trimin1|35902 vs. uniprot
Match: A0A836CK65_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK65_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.170e-32
Identity = 79/137 (57.66%), Postives = 93/137 (67.88%), Query Frame = 3 
Query: 1161 CTVIVSGTTFSGNCYKPADAPANQNLLDAGVGTCTD-TTDCAQRCFIPNASTGLCGTNTCSG-GEICRCYQKVTGVTGASCKPEDLVGVAEGATVSQGGGCSENACNAITNTQGTGAGCCPTS-CSRRTF-AELVLN 1559
            CTV++S   ++GNCY     P NQNL+ AGVG+CT    +C Q C+IPN + GLCG NTCS  G  CRCY K T  TGASCKP DL+GV    +V QGGGC EN CNAIT     GAGCCPTS C+RRT  AEL+ +
Sbjct:  449 CTVLISNVPYTGNCYVRNQQPLNQNLVGAGVGSCTSFLPNCDQLCYIPNDAAGLCGDNTCSSKGFKCRCYLKTT--TGASCKPGDLIGVNPNTSVDQGGGCQENRCNAITTA--IGAGCCPTSPCARRTLLAELLAD 581
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BLAST of jgi.p|Trimin1|35902 vs. uniprot
Match: A0A835Z3V6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.090e-30
Identity = 63/101 (62.38%), Postives = 78/101 (77.23%), Query Frame = 3 
Query:  135 RVLWGCPTGTACSYNCEEHCNIACAKLNVPFKSNAQCSRVSARRQL----AVAQTYRTCSNPAPGARALLGEDADDRDLAGAQ--NDTGLCCYCHRAPTPA 419
            ++L  CP G+ACSYNCE+HC IAC KL++PFKS++QCSRV  RR+L    A AQT+RTCS P P A   LG++ D R LAGA+  ++TGLCCYCHRAPTPA
Sbjct:   19 KLLDTCPLGSACSYNCEDHCKIACDKLHIPFKSSSQCSRVQTRRELMRKLAAAQTFRTCSTPQPSASRALGDEGDHRGLAGARTSSETGLCCYCHRAPTPA 119
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BLAST of jgi.p|Trimin1|35902 vs. uniprot
Match: A0A835YRQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRQ4_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.370e-29
Identity = 69/135 (51.11%), Postives = 88/135 (65.19%), Query Frame = 3 
Query: 1161 CTVIVSGTTFSGNCYKPADA-PANQNLLDAGV-GTCTDTTDCAQRCFIPNASTGLCGTNTCSGGEICRCYQKVTGVTGASCKPEDLVGVAEGATVSQGGGCSENACNAITNTQGTGAGCCPTSCSRRTFAELVLN 1559
            CTV++S TTFSG CY      P   N +D+G+ G C     CAQ C+I N + GLC +NTCS  +ICRCY+KV G TGA+C   +L+GVA   ++S GGGCSEN CNAI+   G  A CCPT+C+RR     +LN
Sbjct:  417 CTVMISSTTFSGLCYPGGTTTPPITNYVDSGMPGGCGG---CAQSCWISNTAPGLCSSNTCSANKICRCYRKVAGATGANCAEGELIGVAVPGSISNGGGCSENLCNAISG-NGQAAACCPTACARRALLAELLN 547
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BLAST of jgi.p|Trimin1|35902 vs. uniprot
Match: A0A836CGA8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA8_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.430e-26
Identity = 64/135 (47.41%), Postives = 82/135 (60.74%), Query Frame = 3 
Query: 1161 CTVIVSGTTFSGNCY--KPADAPANQNLLDAG-VGTCTDTTDCAQRCFIPNASTGLCGTNTCSGGEICRCYQKVTGVTGASCKPEDLVGVAEGATVSQGGGCSENACNAITNTQGTGAGCCPTSC-SRRTFAELV 1553
            C+  VSGT  SG CY   P D P   N +D+G   TC     CAQ C++ N + GLC ++ CSGGE CRCY+KV G +GA+C    L+GVA   ++S GGGC+EN CNA     G    CCPT+C +R   AEL+
Sbjct:  328 CSTTVSGTALSGKCYPNSPQDPPPVPNYIDSGDASTCGG---CAQTCWVSNDAPGLCNSSACSGGEQCRCYKKVPGTSGAACSEAKLLGVAVPGSISSGGGCAENLCNAFATKSGGSGACCPTACVARSLLAELL 459
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BLAST of jgi.p|Trimin1|35902 vs. uniprot
Match: A0A835YQS7_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS7_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.380e-11
Identity = 49/119 (41.18%), Postives = 60/119 (50.42%), Query Frame = 3 
Query:   75 LLVALSVVALGAVAEEEQVERVLWGCPTGTACSYNCEEHCNIACAKLNVPFKSNAQCSRV----SARRQLAVAQTYRTCSNPAPGARALLGEDADDRDLAGAQNDTGLCCYCHRAPTPA 419
            LL+ L +VALGAV ++                      HC IAC KL++PF+S +QCSRV      RR+L     Y   S          G+  DDR+L     DTGLCCYCHRAPTPA
Sbjct:    6 LLLLLPLVALGAVNDD----------------------HCKIACDKLHIPFQSQSQCSRVRVTREGRRELTYRNDYHIGSVTEESDVLFDGDGNDDRELT----DTGLCCYCHRAPTPA 98
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BLAST of jgi.p|Trimin1|35902 vs. uniprot
Match: A0A835YTG7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG7_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.250e-10
Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 3 
Query:   57 MKLQLALLV---ALSVVALGAVAEEEQVERVLWGCPTGTACSYNCEEHCNIACAKLNVPFKSNAQCSRVSARRQL 272
            MKL L L      L  +ALG    E     ++  CP+G+AC++NCE+HC  AC KL++P+KS+ QCSRV  RR+L
Sbjct:    1 MKLYLVLAAYAALLPSIALGTATSEHAERELVSTCPSGSACAFNCEDHCKTACDKLSIPYKSSTQCSRVRTRREL 75
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|35902 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835Z4B2_9STRA1.330e-156100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YK96_9STRA1.420e-5173.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZBN2_9STRA1.620e-3758.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTT6_9STRA6.910e-3555.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CK65_9STRA1.170e-3257.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z3V6_9STRA3.090e-3062.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YRQ4_9STRA5.370e-2951.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGA8_9STRA2.430e-2647.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQS7_9STRA2.380e-1141.18Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835YTG7_9STRA2.250e-1046.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_191contigContig_191:46249..53574 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|35902|CE35901_436
Hectar predicted targeting categorysignal peptide
TranscriptId36224
TrackFilteredModels1
ProteinId35902
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|35902gene_17236Tribonema minus UTEX_B_3156 geneContig_191 46249..53574 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|35902Trimin1|35902|CE35901_436Tribonema minus UTEX_B_3156 polypeptideContig_191 46302..53418 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17236_1exon_17236_1Tribonema minus UTEX_B_3156 exonContig_191 46249..46367 +
exon_17236_2exon_17236_2Tribonema minus UTEX_B_3156 exonContig_191 47418..47591 +
exon_17236_3exon_17236_3Tribonema minus UTEX_B_3156 exonContig_191 49213..49362 +
exon_17236_4exon_17236_4Tribonema minus UTEX_B_3156 exonContig_191 49855..49881 +
exon_17236_5exon_17236_5Tribonema minus UTEX_B_3156 exonContig_191 50425..51072 +
exon_17236_6exon_17236_6Tribonema minus UTEX_B_3156 exonContig_191 52013..52051 +
exon_17236_7exon_17236_7Tribonema minus UTEX_B_3156 exonContig_191 53014..53574 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_17236UTR5_17236Tribonema minus UTEX_B_3156 five_prime_UTRContig_191 46249..46301 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17236CDS_17236Tribonema minus UTEX_B_3156 CDSContig_191 46302..46367 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_17236UTR3_17236Tribonema minus UTEX_B_3156 three_prime_UTRContig_191 53419..53574 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17236 ID=mRNA_17236|Name=jgi.p|Trimin1|35902|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1718bp|location=Sequence derived from alignment at Contig_191:46249..53574+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCACAACACTCTCGCCGACCACACGCCGACCGCAGCACTCACCCAAGCAG
CAGATGATGAAGCTCCAACTGGCGTTGCTGGTGGCGCTGTCCGTCGTCGC
CCTGGGGGCAGTGGCCGAGGAAGAGCAGGTGGAGCGCGTGCTGTGGGGGT
GCCCAACGGGCACGGCGTGCTCGTACAACTGCGAGGAGCACTGCAACATT
GCGTGCGCCAAGCTCAACGTCCCCTTCAAGAGCAACGCTCAGTGCTCGCG
CGTGAGCGCGAGGCGCCAGCTGGCGGTGGCCCAGACATACAGGACGTGCT
CGAACCCCGCGCCGGGGGCGCGCGCGCTGCTGGGCGAGGACGCCGACGAC
CGCGACCTGGCGGGCGCCCAGAACGACACGGGCCTGTGCTGCTACTGCCA
CCGCGCGCCGACGCCGGCGCCCACGCGGAAGCCGACGCAGAAGCCGACCA
CGCGAAAGCCCACCCAGAAGCCTACCAGCAACCCCACCGCACACCCTACC
AGCAAGCCCACCGCACACCCTACCAGCAAGCCCACCGCACACCCTACCAG
CAAGCCCACCGCCCACCCTACCAGCAGCCCCACTAGGAAGCCTACGAGCA
AGCCCACGGCGAAGCCTACCGCTAAGCCCACCGCTAAGCCCACCGCTAAG
CCCACGGCGAAGCCTACGAGCAAGCCCACCGCTGAGCCCACGGCTAAGCC
TACCGCTACGCCTACCGCCACCCCCACGGCTACCCCCACCGCTAAGCCCA
CCGCTAAGCCCACGGCTAAGCCTACCGCTAAGCCCACGGCTAAGCCTACC
GCTAAGCCCACGGCTAAGCCTACCGCTAAGCCCACCGCTAAGCCCACCGC
TAAGCCCACGGCGAACCCCACGTCGAACCCTACGGCTAACCCTACGGCTA
ACCCCACGTCGAACCCTACTGCTAACCCCACGGCTAACCCCACGGCTAAC
CCCACGGCTAACCCCACGGCTAACCCCACGGCTAACCCCACGGCTAACCC
CACGGCTAACCCCACGGCTAACCCCACGGCTAACCCCACGGCTAACCCCA
CGGCTACCCCTACGGCTAACCCCACGGCTAACCCCACGGCTAACCCCACG
GCTAACCCCACCGCCCAGCCAACCCTTCAGCCAACACCAGGGTGCATCTC
AGCAGTGCCTTGCACGGTCATCGTCAGCGGCACCACCTTCTCCGGCAACT
GCTACAAACCCGCGGACGCGCCCGCCAACCAGAACCTGCTGGACGCAGGC
GTCGGCACCTGCACGGACACCACTGACTGTGCGCAGCGCTGCTTCATCCC
CAACGCCAGCACCGGGCTCTGCGGCACCAACACGTGCTCCGGCGGCGAGA
TCTGCCGCTGCTACCAGAAGGTCACCGGCGTCACGGGCGCGTCGTGCAAG
CCGGAGGACCTCGTGGGCGTCGCCGAGGGCGCGACCGTCAGCCAGGGCGG
CGGCTGCTCCGAGAACGCGTGCAACGCCATCACCAACACGCAGGGCACGG
GCGCGGGGTGCTGCCCCACGAGCTGCTCGCGCCGCACGTTCGCCGAGCTG
GTCCTCAACTAAGCGCAAGTGGCGGCGACGACGGCAGCCATGTCCGAGTG
CGGCACGGAGAGTAGAGGGAGCGGGCGACGTCATTGGACAGCGGCCGCCT
GCCGCTGCCGCCCATGTGTCGGTTGCTCAGCTGCGGTCGCGCTGAGCGCT
GCCGTGTCGGCGCGCGCG
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protein sequence of jgi.p|Trimin1|35902

>Trimin1|35902|CE35901_436 ID=Trimin1|35902|CE35901_436|Name=jgi.p|Trimin1|35902|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=503bp
MMKLQLALLVALSVVALGAVAEEEQVERVLWGCPTGTACSYNCEEHCNIA
CAKLNVPFKSNAQCSRVSARRQLAVAQTYRTCSNPAPGARALLGEDADDR
DLAGAQNDTGLCCYCHRAPTPAPTRKPTQKPTTRKPTQKPTSNPTAHPTS
KPTAHPTSKPTAHPTSKPTAHPTSSPTRKPTSKPTAKPTAKPTAKPTAKP
TAKPTSKPTAEPTAKPTATPTATPTATPTAKPTAKPTAKPTAKPTAKPTA
KPTAKPTAKPTAKPTAKPTANPTSNPTANPTANPTSNPTANPTANPTANP
TANPTANPTANPTANPTANPTANPTANPTANPTATPTANPTANPTANPTA
NPTAQPTLQPTPGCISAVPCTVIVSGTTFSGNCYKPADAPANQNLLDAGV
GTCTDTTDCAQRCFIPNASTGLCGTNTCSGGEICRCYQKVTGVTGASCKP
EDLVGVAEGATVSQGGGCSENACNAITNTQGTGAGCCPTSCSRRTFAELV
LN*
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mRNA from alignment at Contig_191:46249..53574+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17236 ID=mRNA_17236|Name=jgi.p|Trimin1|35902|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7326bp|location=Sequence derived from alignment at Contig_191:46249..53574+ (Tribonema minus UTEX_B_3156 )
GCACAACACTCTCGCCGACCACACGCCGACCGCAGCACTCACCCAAGCAG
CAGATGATGAAGCTCCAACTGGCGTTGCTGGTGGCGCTGTCCGTCGTCGC
CCTGGGGGCAGTGGCCGAGGTGAGAGTCTAATCTAATCTCAGCGCACTCC
TTGCGACAAAGATTCAGTGCATGCTCATCACTCGTGATCACTTGTGCAGG
CACCGAAGGGTAGATTGAAAGTTATTGGTGTCTAGTGCTTACATAGTGCC
ACTGAACAGCAATATGCAGGATGAAGTTCTTCGTGTGATCCAGACAGCGC
AGCTACAGGGTCACCACGAGCTTCTGCACCTGATGCGGTAAAATGACAGC
GACAGCGACAGCTTTTTTGAGTTTGCATGCGACTCGGCGACGGTCACCGC
CAAGCACTATGTAGCGGAGTTGCGGCTCCTGCGTGTGCGACGTCTGGCAC
TTGACGTCACACTTGGTGCTTCCAGAATCCTTTCGTCGTTGACCGCTACT
ACAGTACCCGCACCAGCATCGTGGGTAAAGCTTCACGTTGCCAATCACTT
ATTTAAAACCCTCCAATCTTAACGCACTTCAAACGGTCGTTCGAGTTGTA
GGTCTAGTGTTAGTAATACGCTAACGGCCGGCATCAAAATCATGCTGAGC
CTGAGGTCTTCCTTCATGCTTGTGTGTGGCCTTGCTTCATGCTAGTGAGT
GATTGGCTTCTTCTTTTCAAACAACAAGCAACAGTTTGCTTTAACAGATA
ATATATCAGATTCTGTGACGGGCGATATTTGATAGGCTTTCTGAATAAGC
TCATCAACCACAGGCACTTCTGAATCATCGGATCCCGCGCTTTACAAACA
GTATCTTCTGATTCACCCGATTCGGTGCGGTGCTCAGATAACCGTAGTAG
TCCGTTACGGTACCATGACAAAATGTGAGTTCAGTCAGCACCATCACGGC
TGTGCTGCACACTACATTGCATCATCAACTACTGTAACAGCACGTTCAGT
AATCCGAAGTTGACACAATGTGCCTACTAGTGGTACGTCAATGTCATTGA
GCATCATGCGCGTCGTCAACAGATTATCTGATCATCAGCTCCCCGCTGGC
ATCGGCTCTTTCCGTGCGCATCAAAATCTCACAGCTATGATAATGATCCG
CCCCGCAAACTTTAAGCAGGAAGAGCAGGTGGAGCGCGTGCTGTGGGGGT
GCCCAACGGGCACGGCGTGCTCGTACAACTGCGAGGAGCACTGCAACATT
GCGTGCGCCAAGCTCAACGTCCCCTTCAAGAGCAACGCTCAGTGCTCGCG
CGTGAGCGCGAGGCGCCAGCTGGCGGTGGCCCAGACATACAGGGTGAGCA
CCAGTAGCGCGGGACGTCTCACAACACAACTGAATGCGGACGGAGGGTCT
ATGTTGAGTCGTGTCCAGTGGCACTAGCAGGTGTTATAGTGACAGTTACT
GACTCAGAGTCTGTCAGTGATCTGAGTCAAGCAGGGCGATGTGTACAGAA
TCTGTTTCCGTTACGGAATCTGTCAGTGGCATGCTGCTTGTAGGTAATAG
TATGTACTACAAGTAGTTGTTGACACCAGTTCCCACACGACTTTCCAATT
GCCCACAGACAAATACCTCACACAGCCGTTTCTGGGCAGAGCCGCTTCAA
AGTTTGAGTGCGTTTGTTACCATGACGCTGTAGCAGTTGCAGGCGATTTG
GTTTCGAAGCAAAACCCAGACTTCGCGACTCTCAGAGGCTTGTTGAGTTT
GCCTATGAGTAAGTGAGTGAGCCTTGACTTGATGCACAACCAGTGACTGC
ACCGCGTGCTGCTGTCGTTGTGAGCACTGCAGGCATACTTTCGTCTCAGC
CGAGCCTAGATCTTTTGATTCAGAAATGCATGCAGTTATGTGTCTATTTA
CAAACTGATGTAACAGTTCCATTTGCCGCACCGAGACCGCCGCCACCTCT
GCAACCTGTCTGAGACGCACTCGTGTACCCACTTACTGCAAGCCGTGCCC
CATGCCCAGGTGACCTGTTCTTAGACTGCACCACAGTGACTTTTGATGTA
ACAAATACAGTAACTGTAACAGTAACAGTACATGCTGATTCCAAGCCGCA
CGAGCCGTGCCCTCGGGCTGTGCCCACCTCCAAGTTCTTCTTAGGGCACG
CCACTTGTGTAGCTGCACGCTATTGCTAATAGAAGATTGTGATCATCGCT
CACTGCCCCGGTGCGCACCTCCCATTCTGCTGACGCGCTCGACGCCGGCG
CCGTGACCTTTTCAGACCGATCACTCGACGTGATGTGCGGGCCATTGCTA
GTAGTAGTTCATAGATCATCGCCGCTGACGACCGCTGCACACTGTGGCAG
TGACTGCGCGCCTCCGAGTCTGCAGACGCGCTCGACAGGCGCGCTCGATG
CTTTTGGACTGGCGCCATGCCTGATGTCCAGGCTGCCTTCTTACTAGTAG
ACCGCGCCGCTCGTGATGCTGCGCGCCATTGCCAATAGTGGATGGATCAT
CGCTGATGACCGCGGCACTGCGCGCCTCTGCAGAGTCTGACGTGGTTGCA
GCAGACGCGCTCGACGCCTTCTCAGACTGCGCCGCTGTGGCACTCTTGAT
GTACAAGCCACAGTGGCTGCAGCTAGTACTAATAGTCAATAGATCACCGT
CACTGACCGCTGCACTGCGCGCCCCTGCAGACGTGCTCGAACCCCGCGCT
GGGGGCCCCTCTTCTGCGCAGGCTGCCTTGGTAGACCGCGCCACTCTTGA
TGTAACAGTCCTCTCTGTTGCAAATACCAGTTCTACTAGTGGTAGATGGC
TGACGACCGCTGCACCGCGCCTCTGCAGACGCGCTCGACGCCCGCGCCCG
GCGCCCCTCTTCTGCGCGGGCTGCCTTGCCACTCTTGATATGCTCTCTGT
CACAAACTTTGAATACCAGTAGTAGATGGCTGACGATTGCTGCACTGCGC
TTTTGAGTGTACAGACGTGCTCGAACCCCGCGCCGGGGGCGCGCGCGCTG
CTGGGCGAGGACGCCGACGACCGCGACCTGGCGGGCGCCCAGAACGACAC
GGGCCTGTGCTGCTACTGCCACCGCGCGCCGACGCCGGCGCCCACGCGGA
AGCCGACGCAGAAGGTGCGTAACTGTCTTTAACAGTAACTTAGAAGTATA
TTGACTCGAACGCTGGAAAGCTTGCACACAGAAAGTCTTTTTGCCTACTG
CGGTTGTGGCGGCACTGTTTGACGCGTGGCAATATATACTACATGCATGC
GCTCTTGGGCGTGCGTAAATCGACCAGTGTGTCGGCATCCGGTGTGAGGC
TATTAGTAGTAGTAGTAGTACGCATGCGCTGTTTGGTGTGCGCTTCGTCA
CCTGGCAGTGCCGCATTTGCACACGCAGAACGCGGAACATGCATCCACCT
GACTCTGTCAGAGCCGCCGTGTTGTAGAGCAGACTGGCAGCGCGTCACTG
GTGAACGCACATACCCTTTGTAGCGCTTGGGCCGTGGATGTAAAGTTGAA
GTTGAGCTTTTTGTCTCGCGCGCGTCCATCCCGACACGCCATGACGGGTG
TATACTGACGCGTTCTTATGTGTGCGCTTCTGCCTGTTTGTGCCGCCGCC
GCGCAGCCGACCACGCGAAAGCCCACCCAGAAGGTGCGCACTGCTTGCAC
GTGTATCATCTTGTCAGCAACACAAGTAGCAGCTTGGGAATGGCAAATGA
TTGCTTTCAAGGTTGTTATCACAAGCTGTGAAGTGTGTGATGGTCTCAAG
TCATTTGTAAGAGTCAGCTGGGCCCACCGCGAAGTCAGCGGCTGAGCCCA
CTTCAGAACCCATTGTTCGGGTATCAAGACTTGTGAACTGAAAAATCATA
CATCATGTGGTGTAGCATTTCCCGTCACTGTGCACCCAGACTCAGATTCT
GCCCTCTCGTCCACTTTGTCAGCTACTGTCAGTAGGGCGAATGCCCATCG
CAAACCGGCGGTGGACAGTTCTGAAGCCCAGCGTCCCCTTTGACTGCCTG
CACCCAAAGTCGCGGCGGAGCCAACTCTGCAGCTTAGGGTTAGGGTTAGA
GCATCTGCGTGACAGCTGCGCGCGTGCGCACACGATGGCCTGCGGACAAC
CTTTCAACGCACCACCTTCAATGCACGACGTGGGTTAACTGACCTGCCTC
TCGGCTGCCCCTTTCCTCCTCCGCAGCCTACCAGCAACCCCACCGCACAC
CCTACCAGCAAGCCCACCGCACACCCTACCAGCAAGCCCACCGCACACCC
TACCAGCAAGCCCACCGCCCACCCTACCAGCAGCCCCACTAGGAAGCCTA
CGAGCAAGCCCACGGCGAAGCCTACCGCTAAGCCCACCGCTAAGCCCACC
GCTAAGCCCACGGCGAAGCCTACGAGCAAGCCCACCGCTGAGCCCACGGC
TAAGCCTACCGCTACGCCTACCGCCACCCCCACGGCTACCCCCACCGCTA
AGCCCACCGCTAAGCCCACGGCTAAGCCTACCGCTAAGCCCACGGCTAAG
CCTACCGCTAAGCCCACGGCTAAGCCTACCGCTAAGCCCACCGCTAAGCC
CACCGCTAAGCCCACGGCGAACCCCACGTCGAACCCTACGGCTAACCCTA
CGGCTAACCCCACGTCGAACCCTACTGCTAACCCCACGGCTAACCCCACG
GCTAACCCCACGGCTAACCCCACGGCTAACCCCACGGCTAACCCCACGGC
TAACCCCACGGCTAACCCCACGGCTAACCCCACGGCTAACCCCACGGCTA
ACCCCACGGCTACCCCTACGGCTAACCCCACGGCTAACCCCACGGCTAAC
CCCACGGCTAACCCCACCGCCCAGGTACGTGTGTATGTATGTCATTTTGA
ACACTCTGTCCAGCTGGTGTTTTGGAAAAGTCCGTGTTTCAAGGGTGCTC
TCGTGCTCGCCGAAGACAAAATGTAACCCTAATTCTAGGCAGCTCGTACT
GCTGACAGCGCCTATCGCAGATGCATGCAGTGCGCCCTTACCCCTGGTTT
GAGGGCCGGAGTGTCTGTGCGTGTGCGTCAGCAGCTTCTGTTGGCGTCAT
CTTGTGCTACACGCGCAGACGCTGTGTGTCAGTCGTGAGCTAGACTATAC
ACCCATAAGCCCTTTCACTTTTGCAAACCGCCAGCGGCTCTCAATCTGGT
GGTGCCTTGTGTAGGCGGCCTCAGTGCTGCATGACAGCGACGCTCGGATT
TGCTGTCATCTTGAAATGTCCCAGCGATTGTGTATGTAGCAGCTCAAAAT
GCGTTCTGCAGCTCATGTGCAAATCGACGATTCTTGACTGCCGCTGACCA
GGCACATGTAGAAGTATGAAATGTCATGACATCATAGATGTGTACATGCA
CGCACCTTGTATCTATACAAGTCACGTATGGGAGTTGGCCAAAAAAAATG
GCTGCTCGTATGCGGCCCTTCAGATCTACATTTTGCATCCTGGACTGTAA
GTAAAGTGGCACGTGGCAAGTGGAAGTTGACACAATGACTGTACAACCCA
GCTGAAACAGAGTTGAGATGTACTGCAATGGTTACCCTTGTCAGTAGACC
CAAGTGGACAGAATTGGGATGTACTGCGATGGTTACTCTTGTCAGCAGAC
CCAAGTGGACATAACCAACTTGATAAAGCAGATGTTCACACTGAGCGTGC
CCCCCAGCATTGTGACCCTCACCACCTCTTGCACCCTGCTTGCTGCTGTC
GGCCCTGCATCCTGCGCCCGATCCAACTACCACCACTACCACCACCTGCG
CGCCCACCCTTCAGCCAACCCTTCAGCCAACACCAGGGTGCATCTCAGCA
GTGGTACGTGTTCCGAACATGCATGCACTTTGCAGTAGTACAGCATATTT
TACAGTAGTATGGTGATAGCAGGATACCGGAGAAGTATACAGTATGTACC
GTAGACAACTGACGGCTTTTCAAAGCGTTTCATGAAAAACAAGTGCACTG
TGTGGCACGACACAGTTGCCAAGGCTGTGGTTGTGCGGCTTTCAAGCCAG
CATCATGCTTCTGCAAAGCGTTTTACGGCAAAGTCTGCATAGCGCTTGCT
CTGAGGAGCAGCACGTGTGTGAGCTGCCGGTGACCTTGAACAAAACGGCA
CTGTTAGTGTACTTTGCTGCAACGATCAGGTGTACAGCGATGCTGATAAT
CATCTGCCATGGGCGTTCGGCTGCTCGCGTGTATGCAGTTTTTCACCGGT
ATGCAGTGAGACCGACCCAGTCTCTTCATCGACCATAGCTATTTTTTTGC
CGTCCGGCAACACATGAAATCGTGTTGCATTCGCGGCAGCCTACAGTGCT
AAAGGGTTACCGTAGGCTCAACCCCTTGAAGTGTGCCAGCTTCAAGGGTG
CATGACAAGTAGGTCTAGGCCCAGCTCTGACTTGAGAACTGCACAGAAAC
CCCTTTGCATATGACACCGCACAGTCGCAGGGAGACGGTGTGCCATCGCT
GTGCTGTCAGATGAGCGTGGTGGCGGGGCTGCTCTTGTCAGAGGGGAGCC
CCGCAAGTCACTGCGAGCCCCGTTCGCGTCGCCTTCCGCTTTGAGATCCC
GCGCTGCTTCACAACACATAGCGATTGAGCCCGGCCACGCGGCATGTCCC
AACCGGCAGTGTCGTGACGACTCCGCTCAAGAGGAGGTGCCGCAGAGTTG
AACTGCTGCAAATGCACACTACCCGTACTTGAAGTATGTTCACACACTCA
TCCACTCATGCGCTCAACCCTATTCACTCATCAACCCCCCCCCTCCCTGC
TTCGCGTGCCGCCAGCCTTGCACGGTCATCGTCAGCGGCACCACCTTCTC
CGGCAACTGCTACAAACCCGCGGACGCGCCCGCCAACCAGAACCTGCTGG
ACGCAGGCGTCGGCACCTGCACGGACACCACTGACTGTGCGCAGCGCTGC
TTCATCCCCAACGCCAGCACCGGGCTCTGCGGCACCAACACGTGCTCCGG
CGGCGAGATCTGCCGCTGCTACCAGAAGGTCACCGGCGTCACGGGCGCGT
CGTGCAAGCCGGAGGACCTCGTGGGCGTCGCCGAGGGCGCGACCGTCAGC
CAGGGCGGCGGCTGCTCCGAGAACGCGTGCAACGCCATCACCAACACGCA
GGGCACGGGCGCGGGGTGCTGCCCCACGAGCTGCTCGCGCCGCACGTTCG
CCGAGCTGGTCCTCAACTAAGCGCAAGTGGCGGCGACGACGGCAGCCATG
TCCGAGTGCGGCACGGAGAGTAGAGGGAGCGGGCGACGTCATTGGACAGC
GGCCGCCTGCCGCTGCCGCCCATGTGTCGGTTGCTCAGCTGCGGTCGCGC
TGAGCGCTGCCGTGTCGGCGCGCGCG
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Coding sequence (CDS) from alignment at Contig_191:46249..53574+

>mRNA_17236 ID=mRNA_17236|Name=jgi.p|Trimin1|35902|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1509bp|location=Sequence derived from alignment at Contig_191:46249..53574+ (Tribonema minus UTEX_B_3156 )
ATGATGAAGCTCCAACTGGCGTTGCTGGTGGCGCTGTCCGTCGTCGCCCT
GGGGGCAGTGGCCGAGGAAGAGCAGGTGGAGCGCGTGCTGTGGGGGTGCC
CAACGGGCACGGCGTGCTCGTACAACTGCGAGGAGCACTGCAACATTGCG
TGCGCCAAGCTCAACGTCCCCTTCAAGAGCAACGCTCAGTGCTCGCGCGT
GAGCGCGAGGCGCCAGCTGGCGGTGGCCCAGACATACAGGACGTGCTCGA
ACCCCGCGCCGGGGGCGCGCGCGCTGCTGGGCGAGGACGCCGACGACCGC
GACCTGGCGGGCGCCCAGAACGACACGGGCCTGTGCTGCTACTGCCACCG
CGCGCCGACGCCGGCGCCCACGCGGAAGCCGACGCAGAAGCCGACCACGC
GAAAGCCCACCCAGAAGCCTACCAGCAACCCCACCGCACACCCTACCAGC
AAGCCCACCGCACACCCTACCAGCAAGCCCACCGCACACCCTACCAGCAA
GCCCACCGCCCACCCTACCAGCAGCCCCACTAGGAAGCCTACGAGCAAGC
CCACGGCGAAGCCTACCGCTAAGCCCACCGCTAAGCCCACCGCTAAGCCC
ACGGCGAAGCCTACGAGCAAGCCCACCGCTGAGCCCACGGCTAAGCCTAC
CGCTACGCCTACCGCCACCCCCACGGCTACCCCCACCGCTAAGCCCACCG
CTAAGCCCACGGCTAAGCCTACCGCTAAGCCCACGGCTAAGCCTACCGCT
AAGCCCACGGCTAAGCCTACCGCTAAGCCCACCGCTAAGCCCACCGCTAA
GCCCACGGCGAACCCCACGTCGAACCCTACGGCTAACCCTACGGCTAACC
CCACGTCGAACCCTACTGCTAACCCCACGGCTAACCCCACGGCTAACCCC
ACGGCTAACCCCACGGCTAACCCCACGGCTAACCCCACGGCTAACCCCAC
GGCTAACCCCACGGCTAACCCCACGGCTAACCCCACGGCTAACCCCACGG
CTACCCCTACGGCTAACCCCACGGCTAACCCCACGGCTAACCCCACGGCT
AACCCCACCGCCCAGCCAACCCTTCAGCCAACACCAGGGTGCATCTCAGC
AGTGCCTTGCACGGTCATCGTCAGCGGCACCACCTTCTCCGGCAACTGCT
ACAAACCCGCGGACGCGCCCGCCAACCAGAACCTGCTGGACGCAGGCGTC
GGCACCTGCACGGACACCACTGACTGTGCGCAGCGCTGCTTCATCCCCAA
CGCCAGCACCGGGCTCTGCGGCACCAACACGTGCTCCGGCGGCGAGATCT
GCCGCTGCTACCAGAAGGTCACCGGCGTCACGGGCGCGTCGTGCAAGCCG
GAGGACCTCGTGGGCGTCGCCGAGGGCGCGACCGTCAGCCAGGGCGGCGG
CTGCTCCGAGAACGCGTGCAACGCCATCACCAACACGCAGGGCACGGGCG
CGGGGTGCTGCCCCACGAGCTGCTCGCGCCGCACGTTCGCCGAGCTGGTC
CTCAACTAA
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