mRNA_17168 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|133244
Unique NamemRNA_17168
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|133244 vs. uniprot
Match: A0A835Z5G9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G9_9STRA)

HSP 1 Score: 193 bits (490), Expect = 2.460e-62
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 
Query:    1 INLKVEEIDHLLKKGAYDVFREDDQEAKDFVAADLDAIMARAAHKVTYGNSRTSTALGSGFSKASFVSTDQKDEVDLDDPDFWKKAIGLVESKGGNNDA 297
            INLKVEEIDHLLKKGAYDVFREDDQEAKDFVAADLDAIMARAAHKVTYGNSRTSTALGSGFSKASFVSTDQKDEVDLDDPDFWKKAIGLVESKGGNNDA
Sbjct:    1 INLKVEEIDHLLKKGAYDVFREDDQEAKDFVAADLDAIMARAAHKVTYGNSRTSTALGSGFSKASFVSTDQKDEVDLDDPDFWKKAIGLVESKGGNNDA 99
[Close]
BLAST of jgi.p|Trimin1|133244 vs. uniprot
Match: A0A6H5KVU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU7_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 2.730e-32
Identity = 64/91 (70.33%), Postives = 75/91 (82.42%), Query Frame = 1 
Query:    1 INLKVEEIDHLLKKGAYDVFREDDQEAKDFVAADLDAIMARAAHKVTYGNSRTSTALGSGFSKASFVSTDQKDEVDLDDPDFWKKAIGLVE 273
            ++L  EEIDHLLK+GAYDVF EDD E KDFV A +D IM RAA KVTYGN+ T T L + FSKASFV+ D++++VDLDDPDFWKKAIGLVE
Sbjct: 1152 LDLAAEEIDHLLKRGAYDVFHEDDTEGKDFVEASIDDIMKRAATKVTYGNTSTITKLSTSFSKASFVARDEEEQVDLDDPDFWKKAIGLVE 1242
[Close]
BLAST of jgi.p|Trimin1|133244 vs. uniprot
Match: A0A812WHW7_SYMMI (CHD7 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WHW7_SYMMI)

HSP 1 Score: 110 bits (276), Expect = 2.060e-26
Identity = 56/94 (59.57%), Postives = 74/94 (78.72%), Query Frame = 1 
Query:    1 INLKVEEIDHLLKKGAYDVFREDDQEAKDFVAADLDAIMARAAHKVTYGNSRTST---ALGSGFSKASFVSTDQKDEVDLDDPDFWKKAIGLVE 273
            + +K +EID LLK+GAYD+FREDD E  +FV AD+DAIM R+AHK++Y    TS     LG GF+KA+FVS D+K++VD++DPDFWKKA+GL E
Sbjct:  202 LQVKAKEIDELLKRGAYDIFREDDTEQTEFVEADIDAIMQRSAHKISYEGVTTSAISNTLG-GFAKATFVSADEKEDVDINDPDFWKKAVGLDE 294
[Close]
BLAST of jgi.p|Trimin1|133244 vs. uniprot
Match: A0A482SN30_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SN30_9ARCH)

HSP 1 Score: 111 bits (277), Expect = 2.310e-26
Identity = 56/92 (60.87%), Postives = 75/92 (81.52%), Query Frame = 1 
Query:    7 LKVEEIDHLLKKGAYDVFREDDQEAKDFVAADLDAIMARAAHKVTYGN--SRTSTALGSGFSKASFVSTDQKDEVDLDDPDFWKKAIGLVES 276
            +  +EID LLK+GAYDVFREDD E KDFV AD+++I+ R AHKV Y    S+ +++LG+ FSKASFVS D+K++VD++DPDFWKKA+GL E+
Sbjct:   48 MSTKEIDELLKRGAYDVFREDDSEQKDFVEADIESILQRRAHKVVYDGALSKAASSLGN-FSKASFVSADEKEDVDINDPDFWKKAVGLKEN 138
[Close]
BLAST of jgi.p|Trimin1|133244 vs. uniprot
Match: A0A4D9D793_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D793_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.980e-26
Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 1 
Query:   19 EIDHLLKKGAYDVFREDDQEAKDFVAADLDAIMARAAHKVTYGNSRTSTA-LGSGFSKASFVSTDQKDEVDLDDPDFWKKAIGLVE 273
            E++HLLK+GAYDVFR DD E ++F  AD+D I+ R +HKV YGN  + T  L S FSKASFVS D K ++DLDDPDFWKKAIGL E
Sbjct: 1401 EVEHLLKRGAYDVFRGDDAEGQEFQEADIDQILKRQSHKVVYGNQDSLTKNLASSFSKASFVSVDNKKDIDLDDPDFWKKAIGLAE 1486
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BLAST of jgi.p|Trimin1|133244 vs. uniprot
Match: W7U0D9_9STRA (Myb domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0D9_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.990e-26
Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 1 
Query:   19 EIDHLLKKGAYDVFREDDQEAKDFVAADLDAIMARAAHKVTYGNSRTSTA-LGSGFSKASFVSTDQKDEVDLDDPDFWKKAIGLVE 273
            E++HLLK+GAYDVFR DD E ++F  AD+D I+ R +HKV YGN  + T  L S FSKASFVS D K ++DLDDPDFWKKAIGL E
Sbjct:  490 EVEHLLKRGAYDVFRGDDAEGQEFQEADIDQILKRQSHKVVYGNQDSLTKNLASSFSKASFVSVDNKKDIDLDDPDFWKKAIGLAE 575
[Close]
BLAST of jgi.p|Trimin1|133244 vs. uniprot
Match: A0A7S4QWE4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QWE4_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.920e-22
Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 1 
Query:    7 LKVEEIDHLLKKGAYDVFREDD-QEAKDFVAADLDAIMARAAHKVTYGNSRT---STALGSGFSKASFV-STDQKDEVDLDDPDFWKKAIGLVESKGGNND 294
            ++ +EID LLKKGAYDVFR+DD +EAK F+  D+D ++ R++ KVTYGN+     S+ LGS FSKASFV STD   +VDLDDPDFW+KA+GL      N D
Sbjct: 1190 IQAKEIDELLKKGAYDVFRDDDDKEAKQFMETDIDQLLERSSRKVTYGNTSAGSISSGLGS-FSKASFVASTDDGQDVDLDDPDFWEKAVGLDAPAESNAD 1289
[Close]
BLAST of jgi.p|Trimin1|133244 vs. uniprot
Match: A0A7S1B9C3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9C3_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 9.160e-22
Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 1 
Query:   10 KVEEIDHLLKKGAYDVFR-EDDQEAKDFVAADLDAIMARAAHKVTYGNS---RTSTALGSGFSKASFVSTDQKDEVDLDDPDFWKKAIGLVESKGGNND 294
            + +EID LLKKGAYDVFR EDD E   F+  D+D IMAR++  VTYG     + S+ LGS FSKASFVS D  +++DL+DPDFW+KAIGL     G++D
Sbjct:  597 QAKEIDQLLKKGAYDVFRDEDDSENNKFMETDIDEIMARSSRTVTYGGENKGQLSSGLGS-FSKASFVSADNTEDIDLNDPDFWQKAIGLDAPPEGHDD 694
[Close]
BLAST of jgi.p|Trimin1|133244 vs. uniprot
Match: A0A2D4C5P9_PYTIN (Chromodomain-helicase-DNA-binding protein, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5P9_PYTIN)

HSP 1 Score: 96.3 bits (238), Expect = 4.350e-21
Identity = 50/88 (56.82%), Postives = 63/88 (71.59%), Query Frame = 1 
Query:   10 KVEEIDHLLKKGAYDVFREDDQEAKDFVAADLDAIMARAAHKVTYGNSRTSTALGSGFSKASFVSTDQKDEVDLDDPDFWKKAIGLVE 273
            + +EID LLK+GAYDVFR+DD  A+ F AAD+DAI+ R++  V Y     S+     FSKASFVS    D+VD+DDPDFWKKA+GL E
Sbjct:  803 EAKEIDELLKRGAYDVFRDDDSAAEQFCAADIDAILQRSSQIVQYEQEAKSS-----FSKASFVSATTSDDVDIDDPDFWKKAVGLTE 885
[Close]
BLAST of jgi.p|Trimin1|133244 vs. uniprot
Match: A0A7S4N0T0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N0T0_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.050e-20
Identity = 57/90 (63.33%), Postives = 69/90 (76.67%), Query Frame = 1 
Query:   19 EIDHLLKKGAYDVFR-EDDQEAKDFVAADLDAIMARAAHKVTYGNSRTSTALGSG---FSKASFV-STDQKD--EVDLDDPDFWKKAIGL 267
            EID LLKKGAYDVFR EDD E K F+  D+D I+ R++ KVTYGN+ T T++ SG   FSKASFV ST + D  +VDLDDPDFW+KA+GL
Sbjct:  514 EIDELLKKGAYDVFRDEDDNEGKRFMETDIDQILERSSRKVTYGNT-TETSISSGLGSFSKASFVASTGEGDGKDVDLDDPDFWEKAVGL 602
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|133244 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5G9_9STRA2.460e-62100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6H5KVU7_9PHAE2.730e-3270.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A812WHW7_SYMMI2.060e-2659.57CHD7 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A482SN30_9ARCH2.310e-2660.87Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A4D9D793_9STRA5.980e-2663.95Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U0D9_9STRA5.990e-2663.95Myb domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S4QWE4_9STRA1.920e-2257.43Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1B9C3_9STRA9.160e-2256.57Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A2D4C5P9_PYTIN4.350e-2156.82Chromodomain-helicase-DNA-binding protein, putativ... [more]
A0A7S4N0T0_9STRA1.050e-2063.33Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_190contigContig_190:221495..223089 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|133244|gw1.190.12.1
BRITEko00000,ko00001,ko01000,ko03036
KEGG Pathwayko04310,map04310
KEGG koko:K04494,ko:K14436,ko:K14437,ko:K14438
EC3.6.4.12
GOsGO:0000003,GO:0000122,GO:0000166,GO:0000902,GO:0000904,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001221,GO:0001501,GO:0001568,GO:0001654,GO:0001667,GO:0001701,GO:0001775,GO:0001944,GO:0001964,GO:0001974,GO:0002009,GO:0002039,GO:0002064,GO:0002065,GO:0002066,GO:0002165,GO:0002376,GO:0002520,GO:0002521,GO:0002791,GO:0003002,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003205,GO:0003206,GO:0003208,GO:0003215,GO:0003221,GO:0003222,GO:0003223,GO:0003226,GO:0003229,GO:0003231,GO:0003279,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003690,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006325,GO:0006338,GO:0006355,GO:0006357,GO:0006359,GO:0006928,GO:0006935,GO:0006950,GO:0006955,GO:0006959,GO:0006979,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007350,GO:0007379,GO:0007389,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007507,GO:0007512,GO:0007517,GO:0007548,GO:0007552,GO:0007560,GO:0007568,GO:0007600,GO:0007605,GO:0007610,GO:0007611,GO:0007613,GO:0007614,GO:0007616,GO:0007626,GO:0007628,GO:0007635,GO:0008013,GO:0008015,GO:0008094,GO:0008134,GO:0008144,GO:0008150,GO:0008285,GO:0008340,GO:0008344,GO:0008582,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009880,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010259,GO:0010468,GO:0010522,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010631,GO:0010646,GO:0010648,GO:0010817,GO:0010880,GO:0010941,GO:0010959,GO:0014706,GO:0016043,GO:0016055,GO:0016322,GO:0016462,GO:0016477,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019216,GO:0019219,GO:0019222,GO:0019730,GO:0019904,GO:0019953,GO:0021537,GO:0021545,GO:0021553,GO:0021675,GO:0021700,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030097,GO:0030098,GO:0030111,GO:0030154,GO:0030178,GO:0030182,GO:0030217,GO:0030326,GO:0030534,GO:0030540,GO:0030554,GO:0030707,GO:0030855,GO:0030900,GO:0030901,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031974,GO:0031981,GO:0032101,GO:0032102,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0034599,GO:0034708,GO:0034762,GO:0034765,GO:0035064,GO:0035097,GO:0035107,GO:0035108,GO:0035113,GO:0035114,GO:0035116,GO:0035120,GO:0035137,GO:0035176,GO:0035220,GO:0035239,GO:0035282,GO:0035295,GO:0035639,GO:0035904,GO:0035909,GO:0036003,GO:0036091,GO:0036094,GO:0036302,GO:0040008,GO:0040011,GO:0040014,GO:0040018,GO:0042048,GO:0042110,GO:0042127,GO:0042221,GO:0042330,GO:0042393,GO:0042471,GO:0042472,GO:0042551,GO:0042623,GO:0042981,GO:0043009,GO:0043010,GO:0043044,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043269,GO:0043565,GO:0043583,GO:0043584,GO:0043618,GO:0043619,GO:0043620,GO:0044087,GO:0044212,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044665,GO:0044703,GO:0045321,GO:0045595,GO:0045892,GO:0045893,GO:0045927,GO:0045934,GO:0045935,GO:0045944,GO:0045945,GO:0046620,GO:0046622,GO:0046649,GO:0046660,GO:0046883,GO:0048468,GO:0048469,GO:0048477,GO:0048483,GO:0048484,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048562,GO:0048563,GO:0048565,GO:0048568,GO:0048569,GO:0048583,GO:0048585,GO:0048598,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048644,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048738,GO:0048752,GO:0048771,GO:0048806,GO:0048812,GO:0048839,GO:0048844,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050767,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050877,GO:0050890,GO:0050896,GO:0050905,GO:0050954,GO:0051046,GO:0051049,GO:0051094,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051279,GO:0051282,GO:0051674,GO:0051703,GO:0051704,GO:0051705,GO:0051707,GO:0051716,GO:0051924,GO:0051960,GO:0051963,GO:0055008,GO:0055010,GO:0055123,GO:0060021,GO:0060041,GO:0060070,GO:0060123,GO:0060134,GO:0060173,GO:0060255,GO:0060284,GO:0060322,GO:0060324,GO:0060341,GO:0060384,GO:0060411,GO:0060415,GO:0060429,GO:0060537,GO:0060541,GO:0060548,GO:0060562,GO:0060828,GO:0060840,GO:0060872,GO:0061061,GO:0061383,GO:0061384,GO:0061458,GO:0061564,GO:0062009,GO:0065007,GO:0065008,GO:0070013,GO:0070016,GO:0070887,GO:0071103,GO:0071339,GO:0071695,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0090087,GO:0090090,GO:0090130,GO:0090132,GO:0090276,GO:0090596,GO:0090659,GO:0097159,GO:0097367,GO:0097485,GO:0120036,GO:0120039,GO:0140030,GO:0140034,GO:0140097,GO:0198738,GO:1901265,GO:1901363,GO:1901522,GO:1902494,GO:1902679,GO:1902680,GO:1902683,GO:1902685,GO:1903169,GO:1903506,GO:1903507,GO:1903508,GO:1903530,GO:1904062,GO:1904396,GO:1905114,GO:1990234,GO:1990837,GO:1990841,GO:2000026,GO:2000112,GO:2000113,GO:2000177,GO:2000178,GO:2000269,GO:2000270,GO:2001141
Preferred nameCHD6
Descriptionhelicase activity
COG categoryKL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0553@1|root,KOG0384@2759|Eukaryota
Evalue3.37e-21
Seed ortholog157072.XP_008863931.1
Hectar predicted targeting categoryother localisation
TranscriptId133566
TrackFilteredModels1
ProteinId133244
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|133244gene_17168Tribonema minus UTEX_B_3156 geneContig_190 221495..223089 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|133244Trimin1|133244|gw1.190.12.1Tribonema minus UTEX_B_3156 polypeptideContig_190 221495..223089 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17168_2exon_17168_2Tribonema minus UTEX_B_3156 exonContig_190 221495..221656 -
exon_17168_1exon_17168_1Tribonema minus UTEX_B_3156 exonContig_190 222955..223089 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17168CDS_17168Tribonema minus UTEX_B_3156 CDSContig_190 222955..223089 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17168 ID=mRNA_17168|Name=jgi.p|Trimin1|133244|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=297bp|location=Sequence derived from alignment at Contig_190:221495..223089- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATCAACCTCAAAGTGGAAGAGATCGACCACCTGTTGAAGAAGGGCGCCTA
CGACGTGTTCCGGGAGGACGACCAGGAGGCGAAGGACTTTGTCGCCGCGG
ATCTGGATGCCATCATGGCACGCGCTGCTCACAAGGTGACGTACGGCAAC
TCCCGCACCAGCACCGCTCTCGGCAGTGGGTTCAGCAAGGCCAGCTTTGT
GTCCACCGACCAGAAGGACGAGGTTGACCTGGATGACCCTGACTTTTGGA
AGAAGGCAATTGGCCTAGTGGAGAGCAAGGGTGGCAACAACGATGCC
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protein sequence of jgi.p|Trimin1|133244

>Trimin1|133244|gw1.190.12.1 ID=Trimin1|133244|gw1.190.12.1|Name=jgi.p|Trimin1|133244|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=99bp
INLKVEEIDHLLKKGAYDVFREDDQEAKDFVAADLDAIMARAAHKVTYGN
SRTSTALGSGFSKASFVSTDQKDEVDLDDPDFWKKAIGLVESKGGNNDA
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mRNA from alignment at Contig_190:221495..223089-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17168 ID=mRNA_17168|Name=jgi.p|Trimin1|133244|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1595bp|location=Sequence derived from alignment at Contig_190:221495..223089- (Tribonema minus UTEX_B_3156 )
ATCAACCTCAAAGTGGAAGAGATCGACCACCTGTTGAAGAAGGGCGCCTA
CGACGTGTTCCGGGAGGACGACCAGGAGGCGAAGGACTTTGTCGCCGCGG
ATCTGGATGCCATCATGGCACGCGCTGCTCACAAGGTCAGATCATTCAAC
GCAACCCTACAACAGGCCACTGCCAAGTCCAACCCTACCTCTGAGGCTGA
CGCGTTGCTCACAGGGTCATAGTAGCAACCCTACATAAGGGAGCCCTAGA
GCTGACCCCAAGTCTTAACCCTAACCGTAAGGCTAAACCCTGACGTACCC
GCAAGGCTGGTCCCGAACTTACATCTCGTGCTGCTCATGAGGTCAGGCTT
ACCCTGAGGCTCTTACCGTAAGGCTAACCCCGATTTTAAGGCCCTTTACC
CCCGTAACTAACCCCCAAAACCCTGACCCAAACTCTGGCGCGCCCCATAA
GGGCAGGGTAACCCTAATAAAGGCTAAACCTAGCCCTACGGCTCTCCACA
CTCACAGGATTTAAGCAAAGACTGAAGAAGAGCTACAGTATGTAAAGGGA
GACTGTAGTGTCGATTGGCAGCACAATGATCCGATCCAGCAGTAGCACGA
TGATAAGTGCGACAAGCACAGTAGTTTGTTGATTTCAATGTGCAGGCCAT
TGTAGCCCGTGTGTCGTCATATTATCACATCGACTCTGCACCATACACAC
TCTATAGACCACTGCATGCTGGATTGCTGTGTCTTTAGCTCTGCAGAGTA
CTGCTCTCAGGTGCAAGGTTGGCTGAACACACACACATGCAAGGTGGCAT
GTCTCAGTAGATTGGCTGCAGGTACTACACACACGACAGTGCACACTCGC
AACATGTCTCAACCCGTGAAGCAGACGCGAGCGAGCGTGGCCTGTACCCT
CTGCAATCCTTGAACTTGAAGTAAGAGTGTCGCAGTTGCTGATGTGCTGT
GACGTGCCCACAGAAAATGCCATGGCTCTAATGACTGCTGTTCCATATAT
TTGGAAACATACCCACCTGCTGATACGTATGTACTCTTTATTAGATCGCT
CAGGGCGCAAAAAAGCCCAGATGAGTGATATCAAAGCTTACAAGTAGCAC
AAATCTACGTGTCATGTGACGATCTGAAGGAGTTTCGATGACAACCACAT
CTGTACCTCTGCAGGTGACGTACGGCAGCCTTCGTGCTAGTGGCTGCTGT
TCCATGCATGTACATAAAGGTTAGGGTTAAGCTGTTCCATGTATGTACTA
ATGGCTCCTGGTCCATGCACGGCAGCCTTCGTGCTTGTGGCTGCTGTTCC
ATGCATGTACATAAGGGTTAGGGTTAAGCTGTTCCATGTATGTACTAATG
GCTCCTGGTCCATGCATGTACATACCTGCCTACCCCTGCTGATACATACA
TACATACATACATACATATACATATCATTGCAGGTGACGTACGGCAACTC
CCGCACCAGCACCGCTCTCGGCAGTGGGTTCAGCAAGGCCAGCTTTGTGT
CCACCGACCAGAAGGACGAGGTTGACCTGGATGACCCTGACTTTTGGAAG
AAGGCAATTGGCCTAGTGGAGAGCAAGGGTGGCAACAACGATGCC
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Coding sequence (CDS) from alignment at Contig_190:221495..223089-

>mRNA_17168 ID=mRNA_17168|Name=jgi.p|Trimin1|133244|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=297bp|location=Sequence derived from alignment at Contig_190:221495..223089- (Tribonema minus UTEX_B_3156 )
ATCAACCTCAAAGTGGAAGAGATCGACCACCTGTTGAAGAAGGGCGCCTA
CGACGTGTTCCGGGAGGACGACCAGGAGGCGAAGGACTTTGTCGCCGCGG
ATCTGGATGCCATCATGGCACGCGCTGCTCACAAGGTGACGTACGGCAAC
TCCCGCACCAGCACCGCTCTCGGCAGTGGGTTCAGCAAGGCCAGCTTTGT
GTCCACCGACCAGAAGGACGAGGTTGACCTGGATGACCCTGACTTTTGGA
AGAAGGCAATTGGCCTAGTGGAGAGCAAGGGTGGCAACAACGATGCC
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