mRNA_17132 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|179770 vs. uniprot
Match: A0A835Z361_9STRA (Solute:Sodium symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z361_9STRA) HSP 1 Score: 900 bits (2325), Expect = 0.000e+0 Identity = 454/454 (100.00%), Postives = 454/454 (100.00%), Query Frame = 1 Query: 1 MVIGIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQEVCDEYGGVLGSDGASCVYNETRWGSTGIDNGAWPFGDSLQVNAEMTSVDGLPPFPNAILFNWATIFVLAAGNLSAIDFQQRCMAATAPQTAARGCILAGVITLAVTLPVAYMGGLARLFYGPDSAYAAFEVNTCSAPLGLPTCAQWLPDPNAFLKLCATQFPIVLGAWGLIGIAAASMSTSAGALLAISTIMARNVGGKVGDPELRAAGFMLSFARAHVPVVITIGALIAAAYNETGYLLVVAFDIALSSTIAPLLAIVHAPNRITPSGGVVALLGGMSTRVILEFALPKDGSFVLPYGQYAYGYGEGQAGLPSFVDAPDGGTWNAAACDAPRLRDWTGLDSLVSPLVCTALLFGVSAWDLRRMRQGRPPLLSRLVPAHWLVPVVATRSSDCTATTEDPTKTQTATHSHLVLAPK 1362 MVIGIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQEVCDEYGGVLGSDGASCVYNETRWGSTGIDNGAWPFGDSLQVNAEMTSVDGLPPFPNAILFNWATIFVLAAGNLSAIDFQQRCMAATAPQTAARGCILAGVITLAVTLPVAYMGGLARLFYGPDSAYAAFEVNTCSAPLGLPTCAQWLPDPNAFLKLCATQFPIVLGAWGLIGIAAASMSTSAGALLAISTIMARNVGGKVGDPELRAAGFMLSFARAHVPVVITIGALIAAAYNETGYLLVVAFDIALSSTIAPLLAIVHAPNRITPSGGVVALLGGMSTRVILEFALPKDGSFVLPYGQYAYGYGEGQAGLPSFVDAPDGGTWNAAACDAPRLRDWTGLDSLVSPLVCTALLFGVSAWDLRRMRQGRPPLLSRLVPAHWLVPVVATRSSDCTATTEDPTKTQTATHSHLVLAPK Sbjct: 1 MVIGIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQEVCDEYGGVLGSDGASCVYNETRWGSTGIDNGAWPFGDSLQVNAEMTSVDGLPPFPNAILFNWATIFVLAAGNLSAIDFQQRCMAATAPQTAARGCILAGVITLAVTLPVAYMGGLARLFYGPDSAYAAFEVNTCSAPLGLPTCAQWLPDPNAFLKLCATQFPIVLGAWGLIGIAAASMSTSAGALLAISTIMARNVGGKVGDPELRAAGFMLSFARAHVPVVITIGALIAAAYNETGYLLVVAFDIALSSTIAPLLAIVHAPNRITPSGGVVALLGGMSTRVILEFALPKDGSFVLPYGQYAYGYGEGQAGLPSFVDAPDGGTWNAAACDAPRLRDWTGLDSLVSPLVCTALLFGVSAWDLRRMRQGRPPLLSRLVPAHWLVPVVATRSSDCTATTEDPTKTQTATHSHLVLAPK 454
BLAST of jgi.p|Trimin1|179770 vs. uniprot
Match: A0A836C8K4_9STRA (Solute:Sodium symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8K4_9STRA) HSP 1 Score: 481 bits (1239), Expect = 2.280e-164 Identity = 242/429 (56.41%), Postives = 311/429 (72.49%), Query Frame = 1 Query: 10 GIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQEVCDEYGGVLGSDGASCVYNETRWGSTGIDNGAWPFGDSLQVNAEMTSVDGLPPFPNAILFNWATIFVLAAGNLSAIDFQQRCMAATAPQTAARGCILAGVITLAVTLPVAYMGGLARLFYGPDSAYAAFEVNTCSAPLGLPTCAQWLPDPNAFLKLCATQFPIVLGAWGLIGIAAASMSTSAGALLAISTIMARNVGGKV----GDPELRAAGFMLSFARAHVPVVITIGALIAAAYNETGYLLVVAFDIALSSTIAPLLAIVHAPNRITPSGGVVALLGGMSTRVILEFALPKDGSFVLPYGQYAYGYGEGQAGLPSFVDAPDGGTWNAAACDAPRLRDWTGLDSLVSPLVCTALLFGVSAWDLRRMRQGRPPLLSRLVPAHWLVPVVATRS 1284 GI G+ V + Y+LS++ +PP SVGFPGYIYP+Q+VC+ Y GV G++ C++NE +WGS IDNGAWP GD++ +TS DGL PFPNA+ +NWATI +L GNLSA+DFQ RCMAA P+ A C++AG++T AV +P A+MGG ++FYGPDS +A + NTCS+ LGLPTCA+WLPD +AFLK+ +Q P+ +GAW LIGI AASMSTS G +LAIST+++ NVG KV + +L R VP+V I A++A+ +N TGYLLVVAFDIAL+ +IAPLLA ++ P R+TP GGV LL G+ TRVILE+ LPKDGS +LP G YAYGYG GQAGLP FV+AP W+ A CDA +L DWTG+DSLVSPLVC +L+ VS +LRR GRP LLS +VP WL P+ A ++ Sbjct: 28 GITGLTVFSIYMLSSYSQDYPPASVGFPGYIYPDQQVCEMYDGVPGANAEHCIFNEQKWGSAPIDNGAWPTGDAVIHKDSITSFDGLAPFPNAVFYNWATILILGFGNLSALDFQARCMAAKTPKIATIACVIAGLLTFAVGIPFAFMGGFMKVFYGPDSPFAQYTPNTCSSILGLPTCAEWLPDSDAFLKMATSQAPVAIGAWALIGIVAASMSTSTGVILAISTVLSHNVGRKVIHWLRPGTVITQDMLLRVVRTCVPMVTIIAAIVASTHNNTGYLLVVAFDIALAGSIAPLLASIYTPKRVTPGGGVCGLLAGILTRVILEYTLPKDGSLMLPAGSYAYGYGPGQAGLPLFVEAPPAEHWDPATCDASQLSDWTGVDSLVSPLVCALVLYAVSWAELRR--NGRP-LLS-IVPEAWLSPMTAPKT 452
BLAST of jgi.p|Trimin1|179770 vs. uniprot
Match: A0A835YRZ9_9STRA (Solute:Sodium symporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ9_9STRA) HSP 1 Score: 481 bits (1238), Expect = 1.640e-161 Identity = 241/429 (56.18%), Postives = 307/429 (71.56%), Query Frame = 1 Query: 10 GIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQEVCDEYGGVLGSDGASCVYNETRWGSTGIDNGAWPFGDSLQVNAEMTSVDGLPPFPNAILFNWATIFVLAAGNLSAIDFQQRCMAATAPQTAARGCILAGVITLAVTLPVAYMGGLARLFYGPDSAYAAFEVNTCSAPLGLPTCAQWLPDPNAFLKLCATQFPIVLGAWGLIGIAAASMSTSAGALLAISTIMARNVGGKV----GDPELRAAGFMLSFARAHVPVVITIGALIAAAYNETGYLLVVAFDIALSSTIAPLLAIVHAPNRITPSGGVVALLGGMSTRVILEFALPKDGSFVLPYGQYAYGYGEGQAGLPSFVDAPDGGTWNAAACDAPRLRDWTGLDSLVSPLVCTALLFGVSAWDLRRMRQGRPPLLSRLVPAHWLVPVVATRS 1284 G+ G++V +AY+LS + +PP SVGFPGYIYP+Q+VC+ Y GV G++ +CVYNE WG G+DNGAWP GD+L TS DGL PFPNA+ +NWAT+ +L GNLSA+DFQ RCMAA P+ A C+L G+IT AV +P A+ GG ++FYGPDS +A + +TCS+ LGLPTCA+WLPD +AFLKL +Q P+ LGAW LIGI AASMST+ G +LAI+T+++ NVG K + +L R VP+V I A++AA YN TGYLLVVAFDIAL+ +IAPLLA+V+ PN +TP GGV LL G+ TRVILE+ALPKDGS +LP G YAYGYG GQAGLP FV+AP W+ CDA L D+TG+DSLVSP+VC +++ VS W RR R GRP L ++PA WL PV A ++ Sbjct: 225 GVTGLIVFSAYMLSNYSQQYPPASVGFPGYIYPDQQVCEMYNGVPGTEPETCVYNEQVWGPNGVDNGAWPVGDALIHPESFTSFDGLAPFPNAVYYNWATVIILGFGNLSALDFQARCMAAKTPRIATIACLLGGLITFAVGIPFAFNGGFMKVFYGPDSIFAEYAADTCSSILGLPTCAEWLPDEDAFLKLATSQVPVALGAWCLIGIVAASMSTATGVILAIATVLSHNVGKKAIHWFRPTTVITEPMLLIIVRVSVPIVTIIAAIVAAEYNRTGYLLVVAFDIALAGSIAPLLALVYTPNSVTPGGGVCGLLAGILTRVILEYALPKDGSLILPAGNYAYGYGPGQAGLPLFVEAPAAEHWDPETCDATALSDFTGVDSLVSPIVCALVMYAVS-WAERR-RGGRP--LLNIIPATWLSPVAAPKN 649
BLAST of jgi.p|Trimin1|179770 vs. uniprot
Match: D7FZ37_ECTSI (Solute:Sodium symporter family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ37_ECTSI) HSP 1 Score: 400 bits (1028), Expect = 4.960e-133 Identity = 218/456 (47.81%), Postives = 288/456 (63.16%), Query Frame = 1 Query: 7 IGIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQEVCDEYGGV--LGSDGASCVYNETRWGSTGIDNGAWPFGDSLQVNAEMTSVDGLPPFPNAILFNWATIFVLAAGNLSAIDFQQRCMAATAPQTAARGCILAGVITLAVTLPVAYMGGLARLFYGPDSAYAAFEVNTCSAPLGLPTCAQWLPDPNAFLKLCATQFPIVLGAWGLIGIAAASMSTSAGALLAISTIMARNVGGKVGDPELRAAGF-MLSFARAHVPVVITIGALIAAAYNETGYLLVVAFDIALSSTIAPLLAIVHAPNRITPSGGVVALLGGMSTRVILEFALPKDGSFVLPYGQYAYGYGEGQAG-LPSFVDAPDGGTWNAAACDAPRLRDWTGLDSLVSPLVCTALLFGVSAWDLRRMRQGRPPLLSRLVPAHWLVPVVATRSSDCTATTEDPTKTQT-ATHSHLVLAP 1359 +G++G+L +A++LS HP PS+GFPGY+YP+ C+ Y GV + ++GA C+YNE WG+ G+DNGA+PFGD N M +D PFPNAILFNWATIFVL GNL+A+DFQ RCMAA +P+ A G +A +T V + ++MGG RL YGPDS +A+F V+TCS L LPTCA W PD AFLKL TQ P LG W LIGI AASMSTS GA+LAIST+++ N+ K R + +L+ R + V I ++A+ YNETGYLL+VAFDI L+ IAPL A ++ +TP G + A+L G R ILEFALPKDG +P+G++ + YG G+ G LP+F+DAP W+ CD PR+ DWTGLDSL+SP+ ++F W + R L +PAHWL P + T D +KT T A +H+ P Sbjct: 10 LGLLGLLTTSAWMLSNRSPDHPSPSIGFPGYLYPDDATCEAYEGVPAVYTEGA-CMYNEDVWGAGGVDNGAYPFGDKDVFNDGMMDIDAYNPFPNAILFNWATIFVLGFGNLAALDFQARCMAAKSPKIATMGNFIAAGLTFIVGITFSFMGGYTRLNYGPDSQFASFTVDTCSKFLDLPTCAAWEPDATAFLKLTTTQLPTFLGCWVLIGICAASMSTSDGAILAISTVLSHNIARKAIPGGDRFSDVKLLTIVRVSIIPVTLIACIVASTYNETGYLLIVAFDIVLAGCIAPLFAAIYFKKSVTPGGALAAVLFGSILRAILEFALPKDGLLAIPHGEFNFDYGPGEVGPLPTFIDAPASDHWDPDTCDMPRMEDWTGLDSLLSPVTSVVVMF---LWSFIERKMDRT--LWTCLPAHWLDPGYTLNKTS----TLDVSKTSTIADDAHVAAVP 455
BLAST of jgi.p|Trimin1|179770 vs. uniprot
Match: A0A6H5KJW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW0_9PHAE) HSP 1 Score: 394 bits (1011), Expect = 8.140e-128 Identity = 209/424 (49.29%), Postives = 273/424 (64.39%), Query Frame = 1 Query: 7 IGIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQEVCDEYGGV--LGSDGASCVYNETRWGSTGIDNGAWPFGDSLQVNAEMTSVDGLPPFPNAILFNWATIFVLAAGNLSAIDFQQRCMAATAPQTAARGCILAGVITLAVTLPVAYMGGLARLFYGPDSAYAAFEVNTCSAPLGLPTCAQWLPDPNAFLKLCATQFPIVLGAWGLIGIAAASMSTSAGALLAISTIMARNVGGKVGDPELRAAGF-MLSFARAHVPVVITIGALIAAAYNETGYLLVVAFDIALSSTIAPLLAIVHAPNRITPSGGVVALLGGMSTRVILEFALPKDGSFVLPYGQYAYGYGEGQAG-LPSFVDAPDGGTWNAAACDAPRLRDWTGLDSLVSPLVCTALLFGVSAWDLRRMRQGRPPLLSRLVPAHWLVP 1266 +G+IG+L +A++LS HP PS+GFPGY+YP+ C+ Y GV + ++GA C+YNE WG G+DNGA+PFGD M +D PFPNAILFNWATIFVL GNL+A+DFQ RCMAA +P A G +A +T V + ++MGG RL YGPDS +A+F V+TCS L LPTCA W PD AFLKL TQ P LG W LIGI AASMSTS GA+LAIST+++ N+ K R + +L+ R + V I ++A+ YNETGYLL+VAFDI L+ IAPL A ++ +TP G + A+L G R ILEFALPKDG +P+G++ + YG G+ G LP+F DAP W+ C+ PR+ DWTGLDSL+SP++ ++F W + R L +PAHWL P Sbjct: 209 LGLIGLLTTSAWMLSNRSPDHPGPSIGFPGYLYPDDATCEAYEGVPAVYTEGA-CMYNEDVWGPDGMDNGAYPFGDKAVFKDGMMDIDAYNPFPNAILFNWATIFVLGFGNLAALDFQARCMAAKSPTIATMGNFIAAGLTFIVGITFSFMGGYTRLNYGPDSQFASFTVDTCSKFLDLPTCAAWEPDTTAFLKLTTTQLPTFLGCWVLIGICAASMSTSDGAILAISTVLSHNIARKAIPGGDRFSDIKLLTIVRVSIIPVTLIACIVASTYNETGYLLIVAFDIVLAGCIAPLFAAIYFKKSVTPGGALAAVLFGSILRAILEFALPKDGLLAIPHGEFNFDYGPGEVGPLPTFFDAPASDHWDPDTCNMPRMEDWTGLDSLLSPVISVFVMF---LWSFIERKMDRT--LWTCLPAHWLDP 626
BLAST of jgi.p|Trimin1|179770 vs. uniprot
Match: A0A8J6CCI3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCI3_DIALT) HSP 1 Score: 328 bits (840), Expect = 5.620e-102 Identity = 199/444 (44.82%), Postives = 257/444 (57.88%), Query Frame = 1 Query: 7 IGIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQEVCDEYGGV-LGSDGASCVYNETRW-----GSTGIDNGAWPFGDSLQVNAEMTSVDGLPPFPNAILFNWATIFVLAAGNLSAIDFQQRCMAATAPQTAARGCILAGVITLAVTLPVAYMGGLARLFYGPDSAYAAFEVNTCSAPLGLPTCAQWLPDPNAFLKLCATQFPIVLGAWGLIGIAAASMSTSAGALLAISTIMARNVGGK--VGDPELRAAGFMLSFARAHVPVVITIGALIAAAYNETGYLLVVAFDIALSSTIAPLLAIVHAPNRITPSGGVVALLGGMSTRVILEFALPKDGSFVLPY-GQYAYGYGEGQAGL-PSFVDAPDGGTWNAAACDAPRLRDWTGLDSLVSPLVCTALLFGVSAWDLRRMRQGRPPLLSRLVPAHWLVPVVATRSSDCTATTE 1308 IGIIG LV A + + PPPS+GFPGY+YP++ C Y GV +D C YN RW + DNGA+P GD +M + PFPNAI FNWATIF+L GNLSA+DFQ RCMA+ A GC+ AGVIT +P +Y+G + R +YGPDS YA+FE +TCS LGLPTC W PD NAFL L Q P +G W LI I AASMSTS GA+LA+ST+++ NV K +G E +L AR V L+A+ +TGYLLVVAFDI L+ TI PL A + + +P G + ++GG RV+LEFALPKDG +LP+ G YG + L P+F D D W+ +C RL D+TG+DSL +PL LL+ + A L +G P L+ + +L P A D + +TE Sbjct: 247 IGIIGALVTAFWFIQNAPAA-PPPSIGFPGYVYPDEATCKLYEGVPCSADADLCCYNAARWCPDHRNNCVADNGAYPIGDLPIFYTQMGEPSAMAPFPNAIFFNWATIFILGFGNLSALDFQARCMASKTELVATLGCLFAGVITFITGIPFSYLGAVTRFYYGPDSIYASFEADTCSRALGLPTCGLWNPDANAFLHLMTNQAPTFIGGWALITIVAASMSTSDGAILALSTVLSHNVARKLPIGISEKN----LLWVARVAALPVTAAACLVASFTFQTGYLLVVAFDIMLAGTIVPLFAAFYTKSP-SPLGALCCVIGGSGLRVLLEFALPKDGFLILPWPGDEFLDYGAASSDLYPAFFDVADDLKWDPGSCKQSRLEDYTGVDSLAAPLF-GLLLYTLVA--LAEKAKGGP-----LITSWFLTPTPAPAPKDESLSTE 676
BLAST of jgi.p|Trimin1|179770 vs. uniprot
Match: A0A7S3L5I6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5I6_9STRA) HSP 1 Score: 315 bits (808), Expect = 8.870e-97 Identity = 174/410 (42.44%), Postives = 253/410 (61.71%), Query Frame = 1 Query: 7 IGIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQEVCDEYGGVLGS--DGASCVYNETRW-------GSTG-IDNGAWPFGDSLQVNAEMTSVDGLPPFPNAILFNWATIFVLAAGNLSAIDFQQRCMAATAPQTAARGCILAGVITLAVTLPVAYMGGLARLFYGPDSAYAAFEVNTCSAPLGLPTCAQWLPDPNAFLKLCATQFPIVLGAWGLIGIAAASMSTSAGALLAISTIMARNVGGKVGD--PELRAAGFMLSFARAHVPVVITIGALIAAAYNETGYLLVVAFDIALSSTIAPLLAIVHAPNRITPSGGVVALLGGMSTRVILEFALPKDGSFVLPYGQYAY-GYGEG-QAGLPSFVDAPDGGTWNAAA--CDAPRLRDWTGLDSLVSPLVCTALLFGVS 1188 +G G ++ ++++ +H PPPS+GFPGY+YPN+++ + Y GV + A C YN ++ G+ G IDNGA+PFGD ++MT L PFPNAIL+NWATIF+L GNL+A+DFQ RCMAA +P+ A GC++ G T + +P +Y+G + R++YGPD+A A F+ +TC LGLPTC W+PD AF+KL + LGAW LIGI AASMST+ GA+LA+ T+ + N+ ++G P L + +L AR ++A+ +TGYLL+VAFDI ++ +APL ++P +P +++++ G TRV+LEFALPKDG +LP+ + YG A LP+F DAP W+ A C R D+TG+DSL S L+ + GV+ Sbjct: 265 VGWSGCIICCYWLIANAKHDAPPPSIGFPGYVYPNEDIANLYDGVPCDFVENAFC-YNAAKYCTDPSDPGTCGLIDNGAYPFGDKRLFGSQMTDAAALTPFPNAILWNWATIFILGFGNLAALDFQVRCMAAKSPKVATYGCLIGGCFTFFIGIPFSYLGSITRVYYGPDTARAEFDADTCLGILGLPTCGAWVPDDLAFVKLLTHETNAFLGAWCLIGIVAASMSTADGAILAMGTVWSNNIQRQLGKYYPALADSDNLLLAARLSTIPFSLAATVVASQVQKTGYLLIVAFDIMFAAVVAPLFGCFYSPGEASPRAALLSVITGALTRVVLEFALPKDGFLILPFELDEFLDYGPAASAALPTFFDAPAEDLWDPEAEPCIGERFEDYTGVDSLASFLISLIVFVGVT 673
BLAST of jgi.p|Trimin1|179770 vs. uniprot
Match: A0A7S3L0Y3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L0Y3_9STRA) HSP 1 Score: 315 bits (808), Expect = 5.140e-95 Identity = 174/410 (42.44%), Postives = 253/410 (61.71%), Query Frame = 1 Query: 7 IGIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQEVCDEYGGVLGS--DGASCVYNETRW-------GSTG-IDNGAWPFGDSLQVNAEMTSVDGLPPFPNAILFNWATIFVLAAGNLSAIDFQQRCMAATAPQTAARGCILAGVITLAVTLPVAYMGGLARLFYGPDSAYAAFEVNTCSAPLGLPTCAQWLPDPNAFLKLCATQFPIVLGAWGLIGIAAASMSTSAGALLAISTIMARNVGGKVGD--PELRAAGFMLSFARAHVPVVITIGALIAAAYNETGYLLVVAFDIALSSTIAPLLAIVHAPNRITPSGGVVALLGGMSTRVILEFALPKDGSFVLPYGQYAY-GYGEG-QAGLPSFVDAPDGGTWNAAA--CDAPRLRDWTGLDSLVSPLVCTALLFGVS 1188 +G G ++ ++++ +H PPPS+GFPGY+YPN+++ + Y GV + A C YN ++ G+ G IDNGA+PFGD ++MT L PFPNAIL+NWATIF+L GNL+A+DFQ RCMAA +P+ A GC++ G T + +P +Y+G + R++YGPD+A A F+ +TC LGLPTC W+PD AF+KL + LGAW LIGI AASMST+ GA+LA+ T+ + N+ ++G P L + +L AR ++A+ +TGYLL+VAFDI ++ +APL ++P +P +++++ G TRV+LEFALPKDG +LP+ + YG A LP+F DAP W+ A C R D+TG+DSL S L+ + GV+ Sbjct: 463 VGWSGCIICCYWLIANAKHDAPPPSIGFPGYVYPNEDIANLYDGVPCDFVENAFC-YNAAKYCTDPSDPGTCGLIDNGAYPFGDKRLFGSQMTDAAALTPFPNAILWNWATIFILGFGNLAALDFQVRCMAAKSPKVATYGCLIGGCFTFFIGIPFSYLGSITRVYYGPDTARAEFDADTCLGILGLPTCGAWVPDDLAFVKLLTHETNAFLGAWCLIGIVAASMSTADGAILAMGTVWSNNIQRQLGKYYPALADSDNLLLAARLSTIPFSLAATVVASQVQKTGYLLIVAFDIMFAAVVAPLFGCFYSPGEASPRAALLSVITGALTRVVLEFALPKDGFLILPFELDEFLDYGPAASAALPTFFDAPAEDLWDPEAEPCIGERFEDYTGVDSLASFLISLIVFVGVT 871
BLAST of jgi.p|Trimin1|179770 vs. uniprot
Match: A0A7S3KY92_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KY92_9STRA) HSP 1 Score: 307 bits (786), Expect = 2.330e-93 Identity = 183/432 (42.36%), Postives = 254/432 (58.80%), Query Frame = 1 Query: 7 IGIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQE----VCDEYGGV-LGSDGASCVYNETRWGSTG------IDNGAWPFGDSLQVNAEMTSVDGLPPFPNAILFNWATIFVLAAGNLSAIDFQQRCMAATAPQTAARGCILAGVITLAVTLPVAYMGGLARLFYGPDSAYAAFEVNTCSAPLGLPTCAQWLPDPNAFLKLCATQFPIVLGAWGLIGIAAASMSTSAGALLAISTIMARNV---------GGKVGDPELRAAGFMLSFAR-AHVPVVITIGALIAAAYNE---TGYLLVVAFDIALSSTIAPLLAIVHAPNRITPSGGVVALLGGMSTRVILEFALPKDGSFVLPYGQYAYGYGEGQAG---LPSFVDAPDGGTWNAAA--CDAPRLRDWTGLDSLVSPLVCTALLFGVSAWDLRRMRQ 1215 +G G ++ A + +S+ E PPPS+GFPGYIYP+ CD Y GV +D + C YNE W G D GA+PFGD + +MT+ L PFPNAI FNWATIF+L GNL+A+DFQ RCMAA + + A GC + ++T+ V +P AY+G + R+ YGPDS + FE ++C+ LGLPTCA WLPD AFLKL + P LGAW L+GI AASMST+ GA+LA+ T+ + N+ GG++ D L L AR A +P + G IAA Y TGYLL+VAFDI L++ + PL + N +P +V+++ G R+ILEFA+PKDGS +LPY + Y G A +P+F+DAP W+ C+ + D+TG+DSL + ++ + + + R RQ Sbjct: 296 LGWTGCVIMAYWFISSEEDSAPPPSIGFPGYIYPDLVGEGGTCDMYQGVSCVNDQSQCCYNEALWCPRGAPDCDRFDRGAYPFGDKSIYSDQMTNAHSLDPFPNAIFFNWATIFILGFGNLAALDFQSRCMAAKSAKVARWGCFIGSLVTVFVGVPFAYLGSITRVHYGPDSIHGEFEADSCALQLGLPTCALWLPDSYAFLKLLTHEAPGFLGAWCLVGIVAASMSTADGAILAMGTVFSHNIVRQLGVFIPGGEINDDTL------LHMARVATLPFALMSG-FIAAFYKGPGGTGYLLIVAFDIVLATVVVPLFGAFYTKNP-SPRAALVSVVTGGLARIILEFAIPKDGSLLLPYNDLMF-YDVGPAASSYVPAFIDAPAEDIWDPEMEPCNQDQFEDYTGVDSLAAAVLSLVVFCTIQIVEQRLGRQ 718
BLAST of jgi.p|Trimin1|179770 vs. uniprot
Match: A0A1Z5JTZ6_FISSO (Solute carrier family 5 (High affinity choline transporter), member 7 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTZ6_FISSO) HSP 1 Score: 302 bits (773), Expect = 7.800e-92 Identity = 183/440 (41.59%), Postives = 251/440 (57.05%), Query Frame = 1 Query: 4 VIGIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQEVCDEYGGVLGSDGASCVYNETRWGSTG-----IDNGAWPFGDSLQVNAEMTSVDGLPPFPNAILFNWATIFVLAAGNLSAIDFQQRCMAATAPQTAARGCILAGVITLAVTLPVAYMGGLARLFYGPDSAYAAFEVNTCSAPLGLPTCAQWLPDPNAFLKLCATQFPIVLGAWGLIGIAAASMSTSAGALLAISTIMARNVGGKVGD--PELRAAGFMLSFAR-AHVPVVITIGALIAAAYNE-------TGYLLVVAFDIALSSTIAPLLAIVHAPNRITPSGGVVALLGGMSTRVILEFALPKDGSFVLPYGQYAY-GYGEGQAGL-PSFVDAPDGGTWNAAA--CDAPRLRDWTGLDSLVSPLVCTALLFGVSAWDLRRMRQGRPPLLSRLVPAHWLVP 1266 V G G ++ A + + E PP S+GFPGY+YP++ C Y GV ++ C YN +W DNGA+PFGD + +MT L PFPNAI +NW TIF+LA GN+ A+DFQ RCMAA +P+TA GC L G+ T + +P Y+G + R +YGPDS +A F+ ++CS LGLPTC WLPD AF+KL + P LGAWGLIGI AASMST+ GA+LA+ T+ + NV ++ P L +L AR A VP IT A IAA Y TGYLL+VAFDI L++ + + A + N +P + ++L G + R++LEFALPKDG +LP+ + Y YG + L P F D W+ A C + +D+TG+DS+ + V + L+F + + G P L WL P Sbjct: 246 VFGWSGCIIVAYWFIVNAEQSAPPVSIGFPGYVYPDEASCQMYDGVPCTNVDGCCYNAAKWCDANGENCRADNGAYPFGDKPVFSNQMTDPQALTPFPNAIFWNWCTIFILAVGNIGALDFQVRCMAANSPRTAQIGCFLGGLFTFFIGVPFGYLGAITRYYYGPDSVHAEFQADSCSEILGLPTCGAWLPDDKAFIKLLTHEAPPFLGAWGLIGIVAASMSTADGAILAMGTVFSHNVLRQLDAFMPGLITRENLLLAARLATVPFTIT-SACIAAFYKSSDSAAGATGYLLIVAFDIVLATVVPAIFACFYVNNP-SPRAALCSILTGATARIVLEFALPKDGLLLLPFNKPEYYDYGTAASALFPPFFDDNVTNLWDPAVEPCVQEQFKDYTGVDSIAA-FVGSVLVFALV--QMLENSMGEP-----LFTLSWLEP 675 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|179770 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17132 ID=mRNA_17132|Name=jgi.p|Trimin1|179770|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1365bp|location=Sequence derived from alignment at Contig_201:102266..107580+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTCATCGGCATCATTGGCATACTGGTGGCAGCAGCGTACGTGCTGTCback to top protein sequence of jgi.p|Trimin1|179770 >Trimin1|179770|e_gw1.201.35.1 ID=Trimin1|179770|e_gw1.201.35.1|Name=jgi.p|Trimin1|179770|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=455bp MVIGIIGILVAAAYVLSTFEHLHPPPSVGFPGYIYPNQEVCDEYGGVLGSback to top mRNA from alignment at Contig_201:102266..107580+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17132 ID=mRNA_17132|Name=jgi.p|Trimin1|179770|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5315bp|location=Sequence derived from alignment at Contig_201:102266..107580+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_201:102266..107580+ >mRNA_17132 ID=mRNA_17132|Name=jgi.p|Trimin1|179770|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1365bp|location=Sequence derived from alignment at Contig_201:102266..107580+ (Tribonema minus UTEX_B_3156 )back to top |