mRNA_17099 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|154069 vs. uniprot
Match: A0A835Z1G7_9STRA (Guanine nucleotide exchange factor in Golgi transport N-terminal-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1G7_9STRA) HSP 1 Score: 269 bits (688), Expect = 2.750e-91 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 1
Query: 1 LLRLELVLELLEKSGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVAK 414
LLRLELVLELLEKSGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVAK
Sbjct: 1 LLRLELVLELLEKSGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVAK 138
BLAST of jgi.p|Trimin1|154069 vs. uniprot
Match: F0XZH5_AURAN (Sec7_N domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZH5_AURAN) HSP 1 Score: 167 bits (422), Expect = 1.170e-50 Identity = 84/137 (61.31%), Postives = 106/137 (77.37%), Query Frame = 1
Query: 4 LRLELVLELLEKSGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVAK 414
L LEL+L +LE +GP+FR G FV VR LC LLKNCTS+V VV+LSLRIFVAL F+DHLK+E+EVF+ IFLRIL+S+N +HE KMLVLEVF+ LC D +LVEIFL+YD D ++D+FK IV ++A+V K
Sbjct: 6 LSLELLLSVLEHAGPSFRGGARFVGAVRQYLCVSLLKNCTSNVTHVVALSLRIFVALISKFRDHLKAEIEVFIHHIFLRILDSDNSTHEHKMLVLEVFHKLCGDTDSLVEIFLSYDADFESVDVFKHIVVALARVVK 142
BLAST of jgi.p|Trimin1|154069 vs. uniprot
Match: A0A7S3YKY5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKY5_HETAK) HSP 1 Score: 160 bits (406), Expect = 4.080e-48 Identity = 85/138 (61.59%), Postives = 99/138 (71.74%), Query Frame = 1
Query: 1 LLRLELVLELLEKSGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVAK 414
LL LEL+L +E +GPAFR FV VR LC LL NCT VV LSLR+FV L HFKD LKSE+EVF+ IFL+IL+S N ++E K LVLEVF LC DP AL E+FLNYDCDL A+DLF+RIV +MAKV K
Sbjct: 16 LLSLELLLAAMEGAGPAFRRQPKFVYAVRHYLCKALLTNCTLHFTQVVGLSLRLFVTLVAHFKDELKSEIEVFIASIFLKILDSPNSTNEHKTLVLEVFCTLCEDPAALAELFLNYDCDLGALDLFQRIVGAMAKVGK 153
BLAST of jgi.p|Trimin1|154069 vs. uniprot
Match: A0A7S2RK43_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK43_9STRA) HSP 1 Score: 163 bits (413), Expect = 7.420e-48 Identity = 83/138 (60.14%), Postives = 104/138 (75.36%), Query Frame = 1
Query: 1 LLRLELVLELLEKSGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVAK 414
LL LE +L +LE SGP+F+S + F+ VR LC LLKNCTSS VV LSLR+FV L FKDHLK+E+EVF++ IFLRILES+N + E K LVLEVF+ +C D +ALVEIFLNYDC+ +DLF+ IV S+ +VAK
Sbjct: 45 LLSLEFLLTVLEHSGPSFKSSDKFIFAVRQYLCVSLLKNCTSSSTNVVDLSLRLFVRLIAQFKDHLKAEIEVFISNIFLRILESQNSTFEHKRLVLEVFHAICQDAQALVEIFLNYDCNFEHVDLFRSIVLSLERVAK 182
BLAST of jgi.p|Trimin1|154069 vs. uniprot
Match: A0A4D9CUH3_9STRA (SEC7 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUH3_9STRA) HSP 1 Score: 168 bits (426), Expect = 9.200e-46 Identity = 85/137 (62.04%), Postives = 106/137 (77.37%), Query Frame = 1
Query: 1 LLRLELVLELLEKSGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVA 411
+L LEL+L LE++GP FRS E FV VR LC+ LLKN TSS V LSLRIF+A+T HFKD LK+E++VFV+ IFL++LESEN S E K+LVL+VF +LC DPR L+EIFLNYDCDL A +F RIV +++KVA
Sbjct: 389 ILSLELLLSTLERAGPTFRSSEKFVYLVRNHLCSSLLKNATSSNTATVGLSLRIFIAMTAHFKDSLKAELDVFVSNIFLKLLESENSSFEHKLLVLQVFQNLCEDPRLLIEIFLNYDCDLGATSMFSRIVLALSKVA 525
BLAST of jgi.p|Trimin1|154069 vs. uniprot
Match: A0A7S2AZJ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZJ8_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.870e-44 Identity = 74/138 (53.62%), Postives = 103/138 (74.64%), Query Frame = 1
Query: 1 LLRLELVLELLEKSGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVAK 414
+L L+L+L ++ +GPAFR+ + FV +R LC LL+N T++V +V LSL++FV L HFKDHLK+E+EVF+T+IFLRILES N + K +VL VF+ LC DP AL+EIFLNYD D ++DLF+ IV ++A+ AK
Sbjct: 115 ILSLQLLLSVIMNAGPAFRTNDKFVQAIRQYLCVSLLRNSTTNVPRIVDLSLQVFVQLITHFKDHLKAEIEVFITKIFLRILESANSTFHHKSVVLHVFHQLCLDPDALIEIFLNYDADFDSVDLFRHIVDALARCAK 252
BLAST of jgi.p|Trimin1|154069 vs. uniprot
Match: A0A6H5KHB1_9PHAE (Sec7_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB1_9PHAE) HSP 1 Score: 158 bits (400), Expect = 1.050e-43 Identity = 84/136 (61.76%), Postives = 103/136 (75.74%), Query Frame = 1
Query: 10 LELVLELLEK-SGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVAK 414
LEL++ +L+ GP FR+ VR LCA LL +CTS+V VVSLSLR+FVAL + FKDHLK+E+EVF+T IFLRILESE+ + + KMLVLEV LC DP ALVE+F+NYDCDL AIDLFKRI ++ KVAK
Sbjct: 287 LELIVSVLQTYGGPRFRALPAAATLVRGELCAALLHHCTSNVTGVVSLSLRVFVALIKGFKDHLKAEIEVFITSIFLRILESEHSAFDHKMLVLEVISGLCRDPLALVEMFVNYDCDLQAIDLFKRIATALVKVAK 422
BLAST of jgi.p|Trimin1|154069 vs. uniprot
Match: A0A1V9ZTE7_9STRA (Brefeldin A-inhibited guanine nucleotide-exchange protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTE7_9STRA) HSP 1 Score: 161 bits (407), Expect = 3.320e-43 Identity = 81/138 (58.70%), Postives = 102/138 (73.91%), Query Frame = 1
Query: 1 LLRLELVLELLEKSGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVAK 414
L+ L+L+L +L SGP FRSG+ F+ VR LC LL+NCTS+ +V LSLR+FV L HFK HLK+E+EVF+T IFL ILESEN S E K+LVLEV +C D L EIFLNYDCD ++DLFKRIV +++K+AK
Sbjct: 338 LVSLDLLLSILNHSGPTFRSGDKFLQLVRQYLCVSLLQNCTSNYTQIVELSLRVFVELIAHFKAHLKAEIEVFITNIFLGILESENSSLEHKLLVLEVLKQICADGSILGEIFLNYDCDWNSMDLFKRIVTAISKIAK 475
BLAST of jgi.p|Trimin1|154069 vs. uniprot
Match: W2QLJ3_PHYPN (SEC7 domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=W2QLJ3_PHYPN) HSP 1 Score: 160 bits (406), Expect = 4.540e-43 Identity = 78/138 (56.52%), Postives = 105/138 (76.09%), Query Frame = 1
Query: 1 LLRLELVLELLEKSGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVAK 414
+L LELV E+LE +GP+FR GE FV +R LC LL+NCTS+ +VSLSL++F+ L R+FK HLK+E+++F+T IFLR+L+SEN S E K+LVLE + +C DP+ L EIF+NYDCD DLFK+IV ++AK AK
Sbjct: 406 ILSLELVKEILENAGPSFRRGERFVHAIRQYLCQSLLQNCTSNYTQIVSLSLQVFLVLLRNFKRHLKTELDIFITSIFLRLLQSENASFEHKLLVLEALHAICDDPQTLGEIFINYDCDWNTNDLFKQIVHALAKAAK 543
BLAST of jgi.p|Trimin1|154069 vs. uniprot
Match: G4ZJZ8_PHYSP (SEC7 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZJZ8_PHYSP) HSP 1 Score: 160 bits (406), Expect = 4.540e-43 Identity = 78/138 (56.52%), Postives = 105/138 (76.09%), Query Frame = 1
Query: 1 LLRLELVLELLEKSGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLSLRIFVALTRHFKDHLKSEVEVFVTRIFLRILESENRSHEQKMLVLEVFYDLCTDPRALVEIFLNYDCDLYAIDLFKRIVASMAKVAK 414
+L LELV E+LE +GP+FR GE FV +R LC LL+NCTS+ +VSLSL++F+ L R+FK HLK+E+++F+T IFLR+L+SEN S E K+LVLE + +C DP+ L EIF+NYDCD DLFK+IV ++AK AK
Sbjct: 411 ILSLELVKEILENAGPSFRRGERFVHAIRQYLCQSLLQNCTSNYTQIVSLSLQVFLVLLRNFKRHLKTELDIFITSIFLRLLQSENASFEHKLLVLEALHAICDDPQTLGEIFINYDCDWNTNDLFKQIVHALAKAAK 548 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|154069 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17099 ID=mRNA_17099|Name=jgi.p|Trimin1|154069|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=414bp|location=Sequence derived from alignment at Contig_209:53669..54713+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CTGCTGCGCCTTGAGCTCGTGCTCGAGCTGCTCGAGAAGAGCGGTCCCGCback to top protein sequence of jgi.p|Trimin1|154069 >Trimin1|154069|gw1.209.36.1 ID=Trimin1|154069|gw1.209.36.1|Name=jgi.p|Trimin1|154069|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=138bp LLRLELVLELLEKSGPAFRSGEPFVDCVRTGLCAELLKNCTSSVMPVVSLback to top mRNA from alignment at Contig_209:53669..54713+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17099 ID=mRNA_17099|Name=jgi.p|Trimin1|154069|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1045bp|location=Sequence derived from alignment at Contig_209:53669..54713+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_209:53669..54713+ >mRNA_17099 ID=mRNA_17099|Name=jgi.p|Trimin1|154069|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=414bp|location=Sequence derived from alignment at Contig_209:53669..54713+ (Tribonema minus UTEX_B_3156 )back to top |