mRNA_1705 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|346713
Unique NamemRNA_1705
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|346713 vs. uniprot
Match: A0A836CCI8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCI8_9STRA)

HSP 1 Score: 292 bits (748), Expect = 4.590e-98
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1 
Query:   43 MKVTGAIVLAAACGAQAFVAPSAGVRSTQLSMTAQPVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 507
            MKVTGAIVLAAACGAQAFVAPSAGVRSTQLSMTAQPVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR
Sbjct:    1 MKVTGAIVLAAACGAQAFVAPSAGVRSTQLSMTAQPVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 155
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BLAST of jgi.p|Trimin1|346713 vs. uniprot
Match: D7G9E0_ECTSI (PS II complex 12 kDa extrinsic protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E0_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 4.530e-55
Identity = 98/159 (61.64%), Postives = 126/159 (79.25%), Query Frame = 1 
Query:   43 MKVTGAIVLAAACGAQAFVA---PSAGVRSTQLSMTAQ-PVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 507
            MK T   VLA    A AFV    P+A + +   +M+A+ P  R  FLKSAA AA + + +AAPALAE+DNPVVPFLGGGDK+D+NNANVRAYIK+ GMYP+ AGK+VSNGPY++V+++Y+IKGLS +EK+ +KK+ESRF+T++PQ MY IDRINNGLYR
Sbjct:    1 MKFTTVAVLACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSAAGAAAL-LGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
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BLAST of jgi.p|Trimin1|346713 vs. uniprot
Match: A0A7S4RBC4_9STRA (PS II complex 12 kDa extrinsic protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RBC4_9STRA)

HSP 1 Score: 162 bits (411), Expect = 8.770e-47
Identity = 90/141 (63.83%), Postives = 102/141 (72.34%), Query Frame = 1 
Query:   85 AQAFVAPSAGVRSTQLSMTAQPVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 507
            A AF AP A  +ST L+  A    R  F  +AA AA+ A  VAAPA A +D   + +LGG + VDLNNANVR Y+KMPGMYPTVAGK+VSNGPYA+VADVY IKGL+E EK VLKKYESRF T  P   Y IDRINNGLYR
Sbjct:   31 AAAFTAPQAVKQSTALNAEA---GRREFFGTAAAAAIGAFGVAAPASAVVDYEALAYLGGSNVVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVADVYKIKGLTEAEKGVLKKYESRFTTFSPSPDYVIDRINNGLYR 168
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BLAST of jgi.p|Trimin1|346713 vs. uniprot
Match: A0A6V2FDJ2_9STRA (PS II complex 12 kDa extrinsic protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2FDJ2_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.540e-46
Identity = 92/150 (61.33%), Postives = 104/150 (69.33%), Query Frame = 1 
Query:   58 AIVLAAACGAQAFVAPSAGVRSTQLSMTAQPVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 507
            AI  A    A AF AP A  +ST L+  A    R  F  +AA AA+ A  VAAPA A +D   + +LGG + VDLNNANVR Y+KMPGMYPTVAGK+VSNGPYA+VADVY IKGL+E EK VLKKYESRF    P   Y IDRINNGLYR
Sbjct:   34 AIFAALVSAAAAFTAPQAVKQSTALNADA---GRREFFGTAAAAAIGAFGVAAPASAVVDYEALAYLGGSNVVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVADVYKIKGLTEAEKEVLKKYESRFAAFTPSPDYVIDRINNGLYR 180
[Close]
BLAST of jgi.p|Trimin1|346713 vs. uniprot
Match: A0A7S2GXA3_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GXA3_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.140e-45
Identity = 90/150 (60.00%), Postives = 103/150 (68.67%), Query Frame = 1 
Query:   58 AIVLAAACGAQAFVAPSAGVRSTQLSMTAQPVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 507
            AI+ A    A AF AP    +ST L+  A    R  F  SAA AA+ A  VAAPA A +D   + +LGG   VDLNNANVR Y+KMPGMYPTVAGK+VSNGPYA+V+DVYNIKGL+  EK +LKKYESRF    P   Y IDRINNGLYR
Sbjct:    4 AILAALVSAAAAFTAPQTVQQSTALNAEA---GRREFFGSAAAAAIGAFGVAAPASAVVDYENIGYLGGSSIVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVSDVYNIKGLTSGEKEILKKYESRFTAKAPSADYVIDRINNGLYR 150
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BLAST of jgi.p|Trimin1|346713 vs. uniprot
Match: A0A6U4G1G5_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4G1G5_9STRA)

HSP 1 Score: 152 bits (384), Expect = 5.840e-43
Identity = 84/148 (56.76%), Postives = 100/148 (67.57%), Query Frame = 1 
Query:   64 VLAAACGAQAFVAPSAGVRSTQLSMTAQPVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 507
            +LA    A AFV   AG ++T L+  A    R  F   AA AA VA + AAPA A +D   + +LGG   VD+NNANVR Y+KMPGMYP  AGK+VSNGPY +V+DVYNI GL+  EK  +KKYESRFV L+P   Y IDRINNGLYR
Sbjct:    6 LLATVATAAAFVPQQAGPQTTALNAEA---GRREFFGKAAGAAAVAFAAAAPANAVVDYENIAYLGGSSTVDINNANVRVYLKMPGMYPAAAGKIVSNGPYKSVSDVYNIPGLTSAEKDAIKKYESRFVALKPSADYVIDRINNGLYR 150
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BLAST of jgi.p|Trimin1|346713 vs. uniprot
Match: A0A7S1BM05_9STRA (PS II complex 12 kDa extrinsic protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM05_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.030e-42
Identity = 86/149 (57.72%), Postives = 101/149 (67.79%), Query Frame = 1 
Query:   61 IVLAAACGAQAFVAPSAGVRSTQLSMTAQPVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 507
            ++LA      A  AP+A  +    S+ A+  DR AFL +AA A   AV  A+PA A  D   + +LGG DKVDLNNANVR Y+KMPGMYP VAGK+VS+GPYA+V DVY I GL+  EK VLKKYESRFV   P   Y IDRINNGLYR
Sbjct:   21 VILAVLASTVAAFAPNAASQRMASSLAAENTDRRAFL-NAALATSAAVVAASPAGAIRDYEAIGYLGGSDKVDLNNANVRVYLKMPGMYPAVAGKIVSHGPYASVGDVYKIDGLTGGEKEVLKKYESRFVVTAPSPDYVIDRINNGLYR 168
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BLAST of jgi.p|Trimin1|346713 vs. uniprot
Match: F0YKI8_AURAN (PS II complex 12 kDa extrinsic protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKI8_AURAN)

HSP 1 Score: 150 bits (378), Expect = 3.120e-42
Identity = 70/106 (66.04%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:  190 AVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 507
            AV   SVAAPALA+ D   +P+LGG  K+D+NNAN+R Y K+PGMYP  AGK+ SNGPY +V+DVYNIKGL + EK+ +KKYESRF+TLEP  MY IDR+NNGLYR
Sbjct:   32 AVTGASVAAPALADTDYAGLPYLGGSSKIDINNANIRVYAKLPGMYPGAAGKIASNGPYKSVSDVYNIKGLKDAEKAAIKKYESRFITLEPAPMYVIDRMNNGLYR 137
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BLAST of jgi.p|Trimin1|346713 vs. uniprot
Match: A0A1Z5JA50_FISSO (PS II complex 12 kDa extrinsic protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JA50_FISSO)

HSP 1 Score: 147 bits (372), Expect = 3.300e-41
Identity = 82/141 (58.16%), Postives = 99/141 (70.21%), Query Frame = 1 
Query:   85 AQAFVAPSAGVRSTQLSMTAQPVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 507
            A AFV PSA   S  L       +R  FL + A AA +A  +AA A+ + DN  V +LGG + VD+NNANVR Y+KMPG+YPTVAGK+ +NGPY +VAD+YNI GLS KEK ++KKYESRF  LEP   Y IDRINNGLYR
Sbjct:   13 AAAFVTPSAERASVALQA-----ERREFLSALAGAAALAAPMAANAVRDYDN--VGYLGGSEIVDVNNANVRVYLKMPGLYPTVAGKIATNGPYKSVADLYNIPGLSGKEKELIKKYESRFTALEPSADYVIDRINNGLYR 146
[Close]
BLAST of jgi.p|Trimin1|346713 vs. uniprot
Match: A0A4D9D8S1_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8S1_9STRA)

HSP 1 Score: 147 bits (371), Expect = 5.430e-41
Identity = 82/151 (54.30%), Postives = 107/151 (70.86%), Query Frame = 1 
Query:   61 IVLAAACGAQAFVAPSAGVRSTQLSMTAQPVDRMAFLKSAATAAVVAVSVAAPALA--EIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 507
            I L  A  A AF+ P+   + T++ M+A       + K  A AA V + + AP +A  +ID   V +LGG +K+D+NNANVR Y + PGMYPTVAGK+VS+GPY TVAD+Y+I GL+E+EKS+LKKYES+F+TLEP   Y IDRINNGLYR
Sbjct:    5 IALLLAAPALAFMPPTPAPQRTEVIMSAS----RDWKKDLAKAAFVVMPMVAPLVAGAKIDYEGVGYLGGSEKIDVNNANVRVYSRFPGMYPTVAGKIVSHGPYKTVADLYSISGLTEQEKSILKKYESKFITLEPAPEYTIDRINNGLYR 151
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346713 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCI8_9STRA4.590e-98100.00PS II complex 12 kDa extrinsic protein n=1 Tax=Tri... [more]
D7G9E0_ECTSI4.530e-5561.64PS II complex 12 kDa extrinsic protein n=2 Tax=Ect... [more]
A0A7S4RBC4_9STRA8.770e-4763.83PS II complex 12 kDa extrinsic protein n=3 Tax=Dit... [more]
A0A6V2FDJ2_9STRA2.540e-4661.33PS II complex 12 kDa extrinsic protein n=3 Tax=Dit... [more]
A0A7S2GXA3_9STRA1.140e-4560.00PS II complex 12 kDa extrinsic protein n=1 Tax=Hel... [more]
A0A6U4G1G5_9STRA5.840e-4356.76PS II complex 12 kDa extrinsic protein n=1 Tax=Min... [more]
A0A7S1BM05_9STRA2.030e-4257.72PS II complex 12 kDa extrinsic protein n=4 Tax=Cor... [more]
F0YKI8_AURAN3.120e-4266.04PS II complex 12 kDa extrinsic protein n=1 Tax=Aur... [more]
A0A1Z5JA50_FISSO3.300e-4158.16PS II complex 12 kDa extrinsic protein n=2 Tax=Fis... [more]
A0A4D9D8S1_9STRA5.430e-4154.30PS II complex 12 kDa extrinsic protein n=1 Tax=Nan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:1464609..1467447 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|346713|estExt_Genemark1.C_Ctg_40173
BRITEko00000,ko00001,ko00194
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG koko:K02719
DescriptionPhotosystem II 12 kDa extrinsic protein (PsbU)
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2D3K6@1|root,2S50I@2759|Eukaryota
Evalue1.44e-44
Seed ortholog44056.XP_009040947.1
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionphotosystem II 12 kDa extrinsic protein
Ec32 orthologEc-28_000560.1
TranscriptId347035
TrackFilteredModels1
ProteinId346713
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346713gene_1705Tribonema minus UTEX_B_3156 geneContig_4 1464609..1467447 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346713Trimin1|346713|estExt_Genemark1.C_Ctg_40173Tribonema minus UTEX_B_3156 polypeptideContig_4 1464887..1467405 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1705_3exon_1705_3Tribonema minus UTEX_B_3156 exonContig_4 1464609..1465123 -
exon_1705_2exon_1705_2Tribonema minus UTEX_B_3156 exonContig_4 1466532..1466679 -
exon_1705_1exon_1705_1Tribonema minus UTEX_B_3156 exonContig_4 1467323..1467447 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_1705UTR3_1705Tribonema minus UTEX_B_3156 three_prime_UTRContig_4 1464609..1464886 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1705CDS_1705Tribonema minus UTEX_B_3156 CDSContig_4 1467323..1467405 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_1705UTR5_1705Tribonema minus UTEX_B_3156 five_prime_UTRContig_4 1467406..1467447 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1705 ID=mRNA_1705|Name=jgi.p|Trimin1|346713|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=788bp|location=Sequence derived from alignment at Contig_4:1464609..1467447- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ACGTCTCAACAAACCCACCCACCCACCACCCTCTATATAGCCATGAAGGT
CACCGGAGCTATCGTGCTGGCGGCTGCATGCGGCGCGCAGGCGTTTGTGG
CGCCTTCCGCGGGCGTGCGCTCCACCCAGCTGTCCATGACCGCACAGCCT
GTTGACCGCATGGCCTTCCTGAAGAGCGCGGCCACTGCGGCCGTGGTGGC
TGTCTCCGTCGCAGCACCCGCGCTGGCGGAGATCGACAACCCGGTGGTGC
CCTTCCTGGGCGGTGGCGACAAGGTCGACCTCAACAACGCCAACGTGCGC
GCATACATCAAGATGCCGGGCATGTACCCCACGGTGGCGGGCAAGGTCGT
CTCCAACGGCCCCTACGCAACGGTGGCGGACGTCTACAACATCAAGGGCC
TCAGCGAGAAGGAGAAGTCAGTGCTCAAGAAGTACGAGTCGAGGTTTGTG
ACGCTTGAGCCCCAGGTCATGTACGGCATCGACCGCATCAACAACGGCCT
GTACCGGTAGAGAGTGGACAGTTACATGTAGCCGCCGCCCTGCCGGCCCA
GGGCCCTCAACGGCCTACCACACACACCGCCACCGCCCCCCCCCCAACCA
AAAATGTGATGCGCCGCAGCAAACAAACAACTTTACTACTACACTTCCAG
CCATTTGCGCAACGCACACACGATCACCTCTTTTGGAGCCCTCCCACCTG
CCGCAAGCACAGCCCTGTGACGTGGCGCCGCCGGCAGGCGCTCTGTAAAC
CAAATATATATTTTGTGCACAGTCTGTGTGGAACACTA
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protein sequence of jgi.p|Trimin1|346713

>Trimin1|346713|estExt_Genemark1.C_Ctg_40173 ID=Trimin1|346713|estExt_Genemark1.C_Ctg_40173|Name=jgi.p|Trimin1|346713|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=156bp
MKVTGAIVLAAACGAQAFVAPSAGVRSTQLSMTAQPVDRMAFLKSAATAA
VVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAG
KVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRIN
NGLYR*
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mRNA from alignment at Contig_4:1464609..1467447-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1705 ID=mRNA_1705|Name=jgi.p|Trimin1|346713|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2839bp|location=Sequence derived from alignment at Contig_4:1464609..1467447- (Tribonema minus UTEX_B_3156 )
ACGTCTCAACAAACCCACCCACCCACCACCCTCTATATAGCCATGAAGGT
CACCGGAGCTATCGTGCTGGCGGCTGCATGCGGCGCGCAGGCGTTTGTGG
CGCCTTCCGCGGGCGTGCGCTCCACGTAAGTCTCTTCAAAGTTTTGGCCT
AAATATCGGATGGTTGATGTATGGGGAAATGCACGCTGCGCAGGCGGTCA
GCAGCTGAGAGCTGGGAGGCGGCAGGAGGATATCGTGTATGAACAAGTGT
CGGTCTCCTTGATCTTCCCACTTTCTAGCACTAGAGGCCTTTCCTGCCAG
ATGTGCATTTTTTGAGGAGTTTGTTGAGGATGTAGACATCAGGGCTAGAG
CGGGTGACAGGCAGCCCGCCTACGCGATGACAGGATCGCGTGGGCACCGC
GAGCAGCTGGCGCATGCTCTTTGGCTGACCTGCAAGGCGGGGCTGTGCGG
GTCGTGCTTGCTGCTACTACATGCACGCAGTAAGATACTCTTTGTGATCG
TGGACGGGCTTCACTCATACAGCACCAGCGGCTTTTGCAAGCAACGCCCC
GCCGCCCGCGCCGGGGGTTCGGGCGAGCTGAGTTTCAGGCATCTATGAGC
GTCTGCACAGGCTCTGGGCACTAGGCTTATGCGCCTGGCGTGCCTAGAGC
TCGTGCGCACATCTGACACACATCATCAACCTCAAATCTTCACCCGAGCC
TCACTATCATTGCCTGATGGATGCACTGACGCTATCATATGCTGTTGGCT
CGTCTCGTATGAATGCAGCCAGCTGTCCATGACCGCACAGCCTGTTGACC
GCATGGCCTTCCTGAAGAGCGCGGCCACTGCGGCCGTGGTGGCTGTCTCC
GTCGCAGCACCCGCGCTGGCGGAGATCGACAACCCGGTGGTGCCCTTCCT
GGGCGGTGGCGACAAGGTGCGCACACCTAGCGGCTGATGTGAACTTGAGT
TTACACGGGGTTACAAATCCATCAAGCTGGAACGCCTCAACGTTGCGCCA
TGTGGCTGCCGCCGGCTGAGCCGTTTTTTGCCTGTGACCATGTATCTGAT
GCGAGTAGTTTTAACGTCCTTGAACGATCAAATCGAGAGATTGCGAGCAT
CCATCTACAGTTACCTCGCTGTCCTATTTGTTAAACACTGAGCAGCAGGT
GTAGATTCAGTGCGGTTGGCAAAACAGGTGCCCTTTGGCGTGATAATATG
CATTTCATGACATACCTCCAGATGATTTTTGGGTGCATGTTTACACATAG
TGTCTGACCGCTGGGGGCACACTTCGCGATGAAGTTTTCTTTGGAAGTAT
TTATTTGTTACAACAGTTGCTCTCATCCGCCTATGTTGAAGGGTGCAGTT
GTGTGATGTATATCAGTGCACTTTTTCAAAGGGTCGCAAGTTTCAAAAGA
CACCTATAGTATAGCTAACTCCATAGCTGTGATGAGTTTGATTCCTTTGG
AGCAATTCAATATCATTCGATACAAAAGAGACTGCGCGCGCGCGCACAAA
CCGACAAGGGGTGCCCCAGAATCAGGGTACGGGTCTCTCAGGTAGCTGAG
TTTCATCATCACTGTTGACTCCTTAAGCATCCGTTGTCATTGGCACATGG
CTCACCTCACAGTAGCTTCTAGTGGCTTTTTTTTTTGTCAACACAGGGAG
CAGGCAATCTTACAACAATTTCAATATTACGTCAACATTTCGCGCAAGCT
CTCGTCGGTAGCTATCTTCAAGTGTGAATGAATAACCAGCTCTGAAATGT
GGATTTTACGCCATTGCGTAGCAATGCACTGATGTGAGCCATGCATCGGT
GTGCGTTCTTCAATCAACAATTTTGTGTGCATCTAAACCTGTCGGATGCC
TTGTGCATAAAAATAAATTGTTGAACAGACCATGCACAATCATATCAAGC
ACCATCACGTGCAGTCTCAAGCGCGTGTCATGCTCGAGCGTGAGTGGAGT
CAGCTTCGCTCTGAGAGCGCGGGGGGACGTGTTTGACATGACACCAGCGG
ATTCGGTCAGCCTTGCTCGCACGGCGATGGCTCTAGGTGGCGTGCTGCTG
TGCGACAGCCACAAGGACGCTGCAGGGGGGAGGCGGTCAACCGAGTGGCG
CATCCGAAAAGTAGAGGAAGTGGCTCATCTGTGATCCCAGCTGGCCCCGG
CTCGCTGAGTGTACGTGGTTGTAATGCGGCCCGCTGTGGATGCATCACAC
TGTCTCCACTTGTCCTAATGTGACCGCTCTTCAGTACTCAAAAATCAAAA
CCCTCTGTTGATGGTACTTGAAGTTGGCACGGGCACTCACCCACGACGTC
CACGTCACTTGTCGTTCGCGCCAGGTCGACCTCAACAACGCCAACGTGCG
CGCATACATCAAGATGCCGGGCATGTACCCCACGGTGGCGGGCAAGGTCG
TCTCCAACGGCCCCTACGCAACGGTGGCGGACGTCTACAACATCAAGGGC
CTCAGCGAGAAGGAGAAGTCAGTGCTCAAGAAGTACGAGTCGAGGTTTGT
GACGCTTGAGCCCCAGGTCATGTACGGCATCGACCGCATCAACAACGGCC
TGTACCGGTAGAGAGTGGACAGTTACATGTAGCCGCCGCCCTGCCGGCCC
AGGGCCCTCAACGGCCTACCACACACACCGCCACCGCCCCCCCCCCAACC
AAAAATGTGATGCGCCGCAGCAAACAAACAACTTTACTACTACACTTCCA
GCCATTTGCGCAACGCACACACGATCACCTCTTTTGGAGCCCTCCCACCT
GCCGCAAGCACAGCCCTGTGACGTGGCGCCGCCGGCAGGCGCTCTGTAAA
CCAAATATATATTTTGTGCACAGTCTGTGTGGAACACTA
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Coding sequence (CDS) from alignment at Contig_4:1464609..1467447-

>mRNA_1705 ID=mRNA_1705|Name=jgi.p|Trimin1|346713|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=468bp|location=Sequence derived from alignment at Contig_4:1464609..1467447- (Tribonema minus UTEX_B_3156 )
ATGAAGGTCACCGGAGCTATCGTGCTGGCGGCTGCATGCGGCGCGCAGGC
GTTTGTGGCGCCTTCCGCGGGCGTGCGCTCCACCCAGCTGTCCATGACCG
CACAGCCTGTTGACCGCATGGCCTTCCTGAAGAGCGCGGCCACTGCGGCC
GTGGTGGCTGTCTCCGTCGCAGCACCCGCGCTGGCGGAGATCGACAACCC
GGTGGTGCCCTTCCTGGGCGGTGGCGACAAGGTCGACCTCAACAACGCCA
ACGTGCGCGCATACATCAAGATGCCGGGCATGTACCCCACGGTGGCGGGC
AAGGTCGTCTCCAACGGCCCCTACGCAACGGTGGCGGACGTCTACAACAT
CAAGGGCCTCAGCGAGAAGGAGAAGTCAGTGCTCAAGAAGTACGAGTCGA
GGTTTGTGACGCTTGAGCCCCAGGTCATGTACGGCATCGACCGCATCAAC
AACGGCCTGTACCGGTAG
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