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Homology
BLAST of jgi.p|Trimin1|353467 vs. uniprot
Match: A0A835Z6P6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6P6_9STRA) HSP 1 Score: 717 bits (1850), Expect = 2.740e-257 Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 1
Query: 196 MEFVKKRKQQMGAWQKKRDSTPELRARHEFRKEIHALGQRGGWQEILARLDAVRVSGDPPMDIGVYHRSITALAKCDRFEEGTQLLVEMKGKGFQPTAKLFNAVIGAASRVGAWARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKALTLSDEMQERHYIRPDVAHFTYLIHGFGKADKAKRAIRLFADMQKRGFQPTTKTYGTSFYVPVKTYAAAIYAVARNGEADKAAEFMQXXXXXXAMKDAGVQPDVLSHLALAAALDNAGKTDAARQAGLEPAKLSAEVAARAVDVMDLHAHSLVIQAYAISASXXXXXXXXXXRQQHRAHPARDVRAPEANALSPQPSLLHDDMLAYIETLFAQDGPRPDAHTYQMVLDSCTRGAAGEDVLAAVRDSMARHGVAPIPFENRGXXXXXXXXXXAFGGIVLIAAAPVAT 1509
MEFVKKRKQQMGAWQKKRDSTPELRARHEFRKEIHALGQRGGWQEILARLDAVRVSGDPPMDIGVYHRSITALAKCDRFEEGTQLLVEMKGKGFQPTAKLFNAVIGAASRVGAWARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKALTLSDEMQERHYIRPDVAHFTYLIHGFGKADKAKRAIRLFADMQKRGFQPTTKTYGTSFYVPVKTYAAAIYAVARNGEADKAAEFMQXXXXXXAMKDAGVQPDVLSHLALAAALDNAGKTDAARQAGLEPAKLSAEVAARAVDVMDLHAHSLVIQAYAISASXXXXXXXXXXRQQHRAHPARDVRAPEANALSPQPSLLHDDMLAYIETLFAQDGPRPDAHTYQMVLDSCTRGAAGEDVLAAVRDSMARHGVAPIPFENRGXXXXXXXXXXAFGGIVLIAAAPVAT
Sbjct: 1 MEFVKKRKQQMGAWQKKRDSTPELRARHEFRKEIHALGQRGGWQEILARLDAVRVSGDPPMDIGVYHRSITALAKCDRFEEGTQLLVEMKGKGFQPTAKLFNAVIGAASRVGAWARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKALTLSDEMQERHYIRPDVAHFTYLIHGFGKADKAKRAIRLFADMQKRGFQPTTKTYGTSFYVPVKTYAAAIYAVARNGEADKAAEFMQXXXXXXAMKDAGVQPDVLSHLALAAALDNAGKTDAARQAGLEPAKLSAEVAARAVDVMDLHAHSLVIQAYAISASXXXXXXXXXXRQQHRAHPARDVRAPEANALSPQPSLLHDDMLAYIETLFAQDGPRPDAHTYQMVLDSCTRGAAGEDVLAAVRDSMARHGVAPIPFENRGXXXXXXXXXXAFGGIVLIAAAPVAT 438
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | Trimin1|353467|estExt_Genemark1.C_Ctg_1650007 |
| KEGG TC | 3.A.2.1 |
| BRITE | ko00000,ko00001,ko00002,ko03016,ko03029 |
| KEGG Module | M00158 |
| KEGG Pathway | ko00190,ko01100,ko04714,map00190,map01100,map04714 |
| KEGG ko | ko:K02130,ko:K17710 |
| GOs | GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0031123,GO:0031974,GO:0034470,GO:0034641,GO:0034660,GO:0042780,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:1901360,GO:1901363 |
| Preferred name | PTCD1 |
| Description | Pentatricopeptide repeat-containing protein 1 |
| COG category | S |
| Max annot lvl | 33208|Metazoa |
| EggNOG OGs | KOG4197@1|root,KOG4197@2759|Eukaryota,38DHC@33154|Opisthokonta,3BFSV@33208|Metazoa,3CZD4@33213|Bilateria,481F7@7711|Chordata,48YAU@7742|Vertebrata |
| Evalue | 0.000317 |
| Seed ortholog | 8364.ENSXETP00000021779 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Pentatricopeptide repeat |
| Ec32 ortholog | Ec-04_006170.1 |
| TranscriptId | 353789 |
| Track | FilteredModels1 |
| ProteinId | 353467 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17035 ID=mRNA_17035|Name=jgi.p|Trimin1|353467|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1512bp|location=Sequence derived from alignment at Contig_165:49218..63986- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
CTCGCCGCGGCTAGGCAGCTGTTGGGGGGTAGGCCAAGCTGCTGCTTGCA GCTGGCACGGTGTTCGGCTGCTGCAGGGGAAGCGGTGCGGCATTTGCATG CCTCCCGGGCTCAATGGCAGTCGGAGGCAGCCAACAGCGCGGCCTCCAAG GATGGTGAGGGCTCGTCTACTGTCAGCAAATGGCAGCTGAAGAGGATGGA GTTCGTGAAAAAACGAAAGCAGCAGATGGGGGCGTGGCAGAAAAAAAGGG ACTCCACGCCGGAGCTGCGGGCGCGGCACGAGTTCAGAAAGGAGATCCAC GCACTGGGGCAGCGCGGCGGCTGGCAGGAGATACTGGCACGGCTGGATGC CGTGCGCGTGTCAGGGGATCCTCCCATGGACATAGGAGTGTATCACAGGA GCATCACAGCGCTCGCCAAGTGCGACCGATTTGAGGAGGGAACTCAACTG CTAGTGGAGATGAAGGGCAAGGGCTTCCAGCCCACCGCCAAGCTCTTCAA CGCGGTGATCGGCGCGGCCAGCAGGGTGGGCGCGTGGGCACGGGCGAGCC AGGAGCTGGCCACGATGCGCAACTGGGGCGTCAAGCCCGACCTCCACTCC TACAACCTCACCATACGCGCCATGGCGCGGATGGGGCACTGGCACAAGGC CCTCACGCTCAGCGACGAGATGCAGGAGCGCCACTACATCCGCCCCGACG TTGCGCACTTCACGTACCTCATCCACGGCTTCGGCAAGGCGGACAAGGCC AAGCGCGCCATCCGGCTGTTCGCGGACATGCAGAAAAGGGGCTTCCAGCC TACGACGAAGACCTACGGCACCTCCTTCTACGTCCCCGTGAAGACCTACG CCGCCGCCATCTACGCGGTCGCGCGCAACGGCGAGGCAGACAAGGCGGCG GAGTTCATGCAGGCGGCGGAGTTCATGCAGGCCATGAAGGACGCTGGCGT CCAGCCCGATGTGCTGAGCCACCTGGCGCTCGCAGCAGCGCTCGACAACG CCGGCAAAACAGACGCGGCGCGGCAAGCCGGCCTGGAGCCCGCAAAGCTG AGCGCCGAGGTGGCTGCGCGCGCGGTGGACGTCATGGACCTACACGCGCA CAGCCTCGTCATACAGGCGTACGCCATCTCTGCCAGCCTGGTGATACAGG CGTACGCCATCTCCGCCAGGCAGCAGCACCGCGCGCACCCTGCCCGCGAC GTCCGGGCTCCGGAGGCGAATGCCCTATCCCCGCAGCCCTCTCTACTGCA CGACGACATGCTGGCGTACATTGAGACGCTGTTTGCGCAGGACGGGCCGC GCCCAGACGCGCACACATACCAAATGGTCCTGGACTCGTGCACGCGGGGT GCCGCTGGCGAAGACGTCCTGGCGGCGGTGCGCGACAGCATGGCGCGGCA CGGCGTGGCGCCGATACCTTTCGAGAACCGCGGCGGCGGCGGCGGCGGCG GCGCCGGTGGCAATGCATTCGGCGGCATCGTGCTCATCGCGGCGGCGCCA GTGGCTACGTGA back to topprotein sequence of jgi.p|Trimin1|353467 >Trimin1|353467|estExt_Genemark1.C_Ctg_1650007 ID=Trimin1|353467|estExt_Genemark1.C_Ctg_1650007|Name=jgi.p|Trimin1|353467|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=439bp
MEFVKKRKQQMGAWQKKRDSTPELRARHEFRKEIHALGQRGGWQEILARL DAVRVSGDPPMDIGVYHRSITALAKCDRFEEGTQLLVEMKGKGFQPTAKL FNAVIGAASRVGAWARASQELATMRNWGVKPDLHSYNLTIRAMARMGHWH KALTLSDEMQERHYIRPDVAHFTYLIHGFGKADKAKRAIRLFADMQKRGF QPTTKTYGTSFYVPVKTYAAAIYAVARNGEADKAAEFMQAAEFMQAMKDA GVQPDVLSHLALAAALDNAGKTDAARQAGLEPAKLSAEVAARAVDVMDLH AHSLVIQAYAISASLVIQAYAISARQQHRAHPARDVRAPEANALSPQPSL LHDDMLAYIETLFAQDGPRPDAHTYQMVLDSCTRGAAGEDVLAAVRDSMA RHGVAPIPFENRGGGGGGGAGGNAFGGIVLIAAAPVAT* back to topmRNA from alignment at Contig_165:49218..63986- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_17035 ID=mRNA_17035|Name=jgi.p|Trimin1|353467|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=14769bp|location=Sequence derived from alignment at Contig_165:49218..63986- (Tribonema minus UTEX_B_3156 ) CTCGCCGCGGCTAGGCAGCTGTTGGGGGGTAGGCCAAGCTGCTGCTTGCA
GCTGGCACGGTGTTCGGCTGCTGCAGGGGAAGCGGTGCGGCATTTGCATG
CCTCCCGGGCTCAATGGCAGTCGGAGGCAGCCAACAGCGCGGCCTCCAAG
GATGGTGAGGGCTCGTCTACTGTCAGCAAATGGCAGCTGAAGAGGATGGA
GTTCGTGAAAAAACGAAAGCAGCAGGTACGTGTGCATGCTACCTGCAGCC
CGTGTGCCTGCTTTGCACGTGATCGAAGTACAGCTGCAGATCCTCTGGAT
AACATGTTTACGTGTCCTGCAGGCACAATGGCATCAAGCAGTTATGCTGA
GGATCTTAAATACAACGTGCCTGGCGAGAAATCATGTGCTGCAAGCGCGC
GGCAAGCAAAAAGTTGGCTGGCAAAAGTGGTTTTTAATGCTGATGCCTCT
GACTGCACTTGTGCTCACTAATTGTCTCGCAAAGCTGTGTGCTACAACGT
TAATTCACATGGTGTTGCTTTACATTCGTAATATAACGGTTGAGGTTGAT
GATATGCTGGCCGTCAGCAATGACATTGCAACGGCCGCCAGCAATAAATA
CATCAGCATGCTTCATCACGCGACACTTCAGCATTACATTCTAGCGCGTT
CGCTGCTGCGGTAGACGCATAAGGCACCATGGTCTTCACCTAGGTCACAC
AGCTCTTACACACTCACATCAAGGAGCTTCCAACCCAACTTTGGGGAATG
CCCAACCACCTTACTCTTGGGTCTTGAGCTGATTCTCAGTGCGTTTTGGC
AGTGACAGTCAGCTTGCAATCTAGCTTGTTGTTTTTTGTGCACTCAATGT
GAGAAGGGGTGACTCGTACTTCTCTTTGCGGCCAAGAAACCAACAAGAGG
AGCATGTGACCTTTGCTTCACCATGAGATGGTACTTGCATCGCACACACC
CTTTGGCAGCAGATTCAGTGGGAAGTCACCAGTTGAACTTGGCCCAAACT
TCATGACCTCACATGTGTTGGCCACCTGGTGGCGCAGCGGGGCTCGCCCA
CAATGATATTTCAAGAGGCACAAAGAGAGAAAGTCTGATAGCCGGCCGTT
TCATGTAATGCGCGCTCGCCATGCGGTCGCTGTGGCAGCTGCACAGACGT
GATGGAAGCCGCCACAGGGCGTGCGGATCGTACTGTTGTGTTTCGATGTT
GTGCCTCCACCTTGCTCTGCAACTGAGTATGAACAGAGTATGTACAGGGC
ATATTCGGTCCGGCTTGCACCCCGGCGTGTGGTAGGAGTGTTTCCTGGTC
AAGCTTGCTAGCATGCAGGGGACGCTGTCAACGGGGCCGTGTTACCTGCT
ACATCACCTTCTGTACTTCACCTTCAAGTTGTGTCGTCGGCAATCACCGC
GTAACGCGGCAGCCGCAAAACGGAACCATTTTGATCTAGCACCTGTCGAC
ACTGCACTTCATCGAGAGTGCTCTGTGTGCCGGCACCAGTTTAGATCTAG
CAATTGTTGACAAGTCATTTCGTGGAGAGACCACCGTCTGGATCTATCCC
ACTTGCACGCTACTATCGCGCCTGACGCCGCCGCCCGCTACTCACACATG
GGACAGATGGGGGCGTGGCAGAAAAAAAGGGACTCCACGCCGGAGCTGCG
GGCGCGGCACGAGTTCAGAAAGGAGATCCACGCACTGGGGCAGCGCGGCG
GCTGGCAGGAGATACTGGCACGGCTGGATGCCGTGCGCGTGTCAGGGGAT
CCTCCCATGGACATAGGTGCGTCAGGAAGTGACCTTATCCTTTGTATTTT
AGGCAATATGGGTTCGTCTGAAGCCTCAGATGTTAGGGCTGGTGGCTGGC
AGGAGCCAGGCGCCGTGCGCGTGTCGGGGGAACCCCCCATGGACATGGGT
GCGTTGAGCACTGACTTGGCCGGTGCACTTGAAGTTCAGCTGGCAGGAGA
TACTGGCGCGGCTAGATGCAGTGCGCTTGTCGGGGGACCCCCCCTTGGAC
GTAGGTTCGTTGAGCACTGACTTGGCTTGTGCACTTGAAGTTCAGCTGGC
AGGAGATGCTGGCGCGGCTAGACGCGGTATGTGTGTCGGCGTACCCCCCC
ATGGACATAGATGCGTTTTGCGCTGACTTGGACTGTGCGTTCAGGGGGGT
TCGTCTGAAACATCAACTGTTGAAGTTGGTGGTTGGCAGGGAGACAGGCG
CCGTGCGCCATGTCAGGGGAGCCCTCCATAGACATGGGCGCGTTGGGTAC
TAATACAGCCTGTGCATTTGGGCATCCGTTTGTCTGAGCAGTGACACTTG
AAGTAGGTGGCAGCAGGCAGGAGGCGTGTTGCCAAAGTATACATGCGTCT
TGAAAACCATACCAGCGAGCCTACCTACGCATCTGGGCATCTTTTTTGTC
AGCGAATTGTCAAGGCATGATAAATGAAGCAACCATGTTTGTGCCCAGAA
TGCTTGGAGGCGTGGTGCTGCAGTTTTGCGCGACAGGTGCATGGTGTCGG
GGTTAAGTTGAGGTTAGTTGAGGTTGACACCGGGGCTTAGATGTCGGAAG
GTTCTGGCGCGCTCGATGCTCTTGACTGGGGAGCACACCATACATACATA
CACAAGCGGGCAGCGAGCAAAGCACGCCCTCTGCATATTTGCTCGAGGTC
TTGGTACCATTCTTCAAGTGGATGGTTGTTGAAATCCCCTCCACGTACTG
GAGGAGACGCATTTCGCAACGTGTCAGACAGCCTGATGCGCCTGGACGCG
TGTTGCTCGAAAGCCCCTCATGGGGAAGGGTGAGCAACAACAATCCAGAG
CCTCCACGTGGAATACACTAACTGCTTCTTTGATAGTGAAAACGCCTATG
TGCATACTTCCAAGTACCTTGTACATGGCAACGGCAAGAATCTTGCACAT
GCGGAGTGCCTTGCCGAGTGTGTTGGATATGGGTAGGTTGAGGTTAGCTT
ACGGCTACGTACCTCACTCTGACTCAAAGTTTGAGGGCAGCTGCAAGCGT
CCTTATGGTTGGTGCAGTTGAAGCTCGTAACTGGCCGCAGTCTGTGAGAC
ATGCGCGCAGATCTGAAATGTTGAAGTTGACAGAGAGATTTACCTCAGCG
TCAAGGAGGCTCGCGTGCACCTGTCTCTGCTGTGTTGCACAGCGCACTTG
AATGAGGCTCATGTGCTGCAACGATGCGTTTTCATGATATTTGCATTACT
TTGGTGTTCAAGTGCTGCAGCGATTCTGCTCTGAGTTTCTTCGTCAAGTG
GCGGTGACTTTGCAAGAAGAAGCGTGCTGGACATTGTGGCCGCCATGCGC
CTCATGCAAGCGACGAGCCATGCGACTGCACCCATTTCAGCATAACTTCA
TACCAACTGCTGCAAGCGTGTGGCTTGTCGCACTGTTAACGAGGGGTGCA
CGCGAGGGCAGGCTTTGCTGGCAAAGCCAGGCACATCTCGATAGTGTCGT
TGCAGGAATGACACAGGCCCTTACTTACGTACATACATGCTGGCAACCCC
CGTGCACCCAGGCGCTCCAACGAGCTCAAACCTAAGCCTGTTCATCCAAT
ACTCGTTGCTTGATGTTGAGCAGTAGACACTCGGGTTCCCCCCTGGCTGG
GGACACAGCGCATGTTGGAACTGTGCGCAACGGCAACTGCTTCCTCCGCC
GCGCTCACAGGAGTGTATCACAGGAGCATCACAGCGCTCGCCAAGTGCGA
CCGATTTGAGGAGGGAACTCAACTGCTAGTGGAGATGAAGGGCAAGGGCT
TCCAGCCCACCGCCAAGCTCTTCAACGCGGTGATCGGCGCGGCCAGCAGG
GTGGGCGCGTGGGCACGGGCGAGCCAGGTATGTATGTATGCCTACCGAAC
ACATGAGACCTTGTCATACTGAACAGCCATGCCTCGAATGCTAAAAAACT
TGCTCACAGAAGTCTTTTGACTACTGTGGATGTTGTGGCACTGTTTGACT
CGTGGCCAGTAGCAGCAGCAGCGGCGACCGCAGTCATTGTTGGAAGGCAT
TCAGCTTGACGGCTCACCACACGTTGTCAACTAGTGGTCTACGATCTTGT
GACTTGTTCCCATGTACGTATGATGCAGTTGAAGTAGAGGGCTGCCTTCG
TAGGACGGACTTAGTGTCTTCATAGAAAGCTCTTCTTAGGCCAGCAGGGT
GAGCGCATAGGCCCGGGCGAGTCAGGTTTGTAGTATGATGAAGTTGAAGT
AGGGGGTTGACTTAGTACTCTTCAACGCGGTCATCGGCGCAGCCAGCAGG
GTGGGCGCGTGGGCACGGGCGAGCCAGGTATGTACGTATGATGCGTTAAA
GTACAGGGTTGAAGTTTAGGGTCGACATTGAAGGGGGCCGAGTGTGTCGT
CATGGATTGACGAGCCGATGACGACTGTGCATTGCAACACTTCACTTTGT
CATAGAAGTGACCATCTAAAGGTTTGTACGCAGGCGTACTGCACTGCAGT
CGCGAGTGTGCACGAGCAAACCAGTTGTATGCGCGGAACTTGTCGTCTTC
AATGTATACGCCGCCACATACTCACTAGTTGGTGTGGTGGTCCTCGACCA
AGGTAGGGCTGTTGTGCCCATGCCCAACGCCCAAGCCTACCTAACCCTGA
ATATGCACCATCATCGAACAGGGGTGTACGACCTATCGCACGAGTAGCAT
CAATGCTGGTGTTGATGCGGCTGCCATATATAACATATCAATTCCCGCTC
CTGCATCCCTAATGCTGCCGTCCGCTTGCGCGCACGAGCGGACAGCGCTC
AGTACAATGCATTCGCCTTTGTCAGAACCTAGGATTAGGGTTAGCTGTCA
CTCGGGCTCACGCGCCGGGCCTCCAACTATTGCAGTGGTACAAGTGGCGC
CGTTTTGTCTACAGCATGGTGACATACCTCCAGTTGAAGTTTATGTTGAT
AGGTGTTGATGCGCTGGCGGCGGACTGCTCTTGCTGACTGCGTCAAGTGC
CTAAATAATGTCTTTACATCAGAGATGGCGCGTTAACTTGTTGCACCGGT
ACGAGTACAAGTTTTTTGTACCGGTTTTAACCCGTAACCGGTGGCTCGCT
GCGCCACACGCGTTAACCGGTACGTGTAACTTGCCGTGGGAGGCAACGCG
TAATCACCGATCGGTCCCGCAGCTGAACTTGCGGTACAAGTTAAAATTGC
CTGTTCCGCTTTATTCTGTCGGTGCTCGAAGTTCTGCCGAGGGAACATCA
CCGATGGTGGGTATAGCGAGCCGATGGCACGATGGCGACCTTGGCACGGA
TGCGCAACTAGAAAGGCCTTCTAGCTTTGAGCAGGGCTAGCTTAGAGTTC
GTGAAACTATGTGTAGCGTAGCGACGCACGCACGCTTGGCTGCCTACAGA
ACGCAGGTGCCGACGCCGACAGCAAGCAGTGCTGCACAGCACGCGTCTTT
CAGCGTGATGGGTTCACTTCACGAGTGATCCGTGGAGAATAAGCCGTGCT
GGTATGCTGCTGCTGTGACGTGTGTGCTGCACGCTATGCATATCATGCAA
TCTATGCTACCGTGCCTCAGCAACATCCACTGTGCAAATGCGTGCCCACC
TCTGCAGCCTTGATACACATGCCAGTCAATGAGTAATGAGTACATGAGCA
TATCATAACCTTTGCAAGCGATAACATCTGATTGTCACTCCAAATAACTG
GTGCAGCTGGTGAAAACTGGTTGGACCAGTAATCACCGATGCAACAAGTA
TACGGGTGCCGGCTGGCACAGCGCACCAGTTAAACTTGTACGGGTAGCCA
CAGCTACCAGTGTCAGAATACTCGTACGGGTGCTTGTCAAAAAATTTCTC
GCGCTACGCGCGACCGGTGCAGAGATGGTGCGACGCGCCATCTCTGCTAT
ACATGCGCCCAGGAGCTGGCGACAAATGCGCAACTGGGGCGCAGACCCTG
GCCTGAACTCCTACACTTCAAATCACTTGCGTTGAAGGAGCACACTCGGA
AGCACAGGTATGTACATATATAGTCCGCAGTCTCGACGCATACATACCAT
GAAACGTACAGACGTGTGTGCACGTGCCGGCGAACCGCTCTCTCTCTGAC
CGCGTGCCGTCCGTTGAAGTATACTTCAAAGTACGTATATGCGCATGCCG
TCGATGCATACATGGTAACACACGCATCAATGTGTGTGCACTTGCCGGCG
AACCGCACTTCTCCGTCCGCGTGCCGTCTGTAGTAGAATACAAAGCGTAT
ATACACGCGCATACAGTCGATCCACACATGGCAATACGCTTATAAATCAA
TAAATAAATGTGTGTGCACTCGCCTGCAAACCCCTCTCTCTCTGACCGCG
TGCCGTCGTCGTTGTCGCGCCGCGCACCCCAGGAGCTGGCCACGATGCGC
AACTGGGGCGTCAAGCCCGACCTCCACTCCTACAACCTCACCATACGCGC
CATGGCGCGGATGGGGCACTGGCACAAGGTATGTATGTATGTACGCGTGA
AATTGCAGCATCCTTGCAGAAGCGGCGGGCGGCGCATTTCGTCTGCCCGG
ATTTGCAAATTCTGCACGCATCAAAGGAGATGTTGTCATTCCCATGACTT
TGGCAAAACTGCCAAGAGTCGCAGGGTGGTTGGTGGCCAGGAGTTTTCAA
TTGCGCCGCCTGTACGGTAAGCATGTGTGCGCGGTTGGGACACAGTCGCG
AGCGTTTGTTGGCGGCAACAATCAGGGATAGGGTAAGGGTAAGGGTGTGG
GTGTGGGGTGGCCACTCCTGGTGGGAGAACGGCGCTCCACAAGTGCAGGT
AACCTCAACAACCTGGACTTGCAGGGGGTGCGGGGGAAGGGTGAGGAGCA
AAATTGAAGTGCTCATGCACAAATTCAAGTTTCCCACTCCCACTCTGAAG
TTGGAGTCTGCGTGCACAAATCCGCGGATGCTCGCCTTTACCCTGAGCTC
CACGCCATTCCTGCCGCATATATGCATTTGCAACTTGTGTGTGCATCCCC
TATCGCCAAACTCCAATCCTTGATTATGCCCTTGGGCTCAGTAACAAGGT
GCCAAGTACATGGCAAGTAGGGCTAGGGCTGGTGTTGGGCAGGGAGGCCG
CGCGTTCGCCACGTGTAGCAAGTACTTGAAGTACAAGTTTGAAGCACATG
TTGACCGCGGAGCAACTGCATCAGTTCACAAGACATCCGGTTTTCATTGA
GACCATTGATCATCTGGGCATCCTAGGCGAGGAGTCAGTGAGAATCACAG
AAATCCCAAGAAGCCTATACGCGGGGGACATGCGCCATGCCTCTCAGACA
TTGCCGATTTATTCGGCAGACCGAGTCGCGAATCGATTTTTTGACCGAGG
TTTACTTGCAACTCGGGGTCTCGGATACACCGATTAAAATCGGTGATAAA
TCACTCGGTCTGACAGAGATGCTAAAAAAATTACTCGGTGTGGTGTCCCG
ACACCGATTTTTTTTCGCAGCTGCACATGTGCGGGATGGGGCCTTTCCGG
AAGAAAGCCGAACGACGGAAGTTCCGAAAGGTCGACATCGAATCCTTTTA
TTCTTCCGAAGTCGGGTCGACTTCAGTTGTGACAAAAAAACAAATTACAA
AAATCGCCATGCAGTGAAGCAGCAGAAGCTGCAGCAGCAGACATATGTAC
TTTTTATTAATTCTGTGTACTACTGGTTGTGGAAGGGCTGGAGTTCCCAC
CCCACTGTCTGCAGCCACATGCTCTAAGCCCCTTCATGAAGGATGGCACA
TGCATGGAGTTTAGTGTACTCAGTCATGCAATGCTTCGAAGGTCGAGGAC
GAGCATCTCACGGAAGAGAAGAAGCTCTTGGGAGGCTCCTGTCAGCTGCT
GCAGCATAAAAGCTTGGCAAGAAGCGCGACATCTGATTCACTCGTCACAT
GAAGTTCGACAACTTTGAAAACCAGCAATGGCCTGTGCCTCAGAAGTGCA
ATTTCCTGCTTGAGGCACGAGAAGGACGCGGAGACGACGATGGACATGCA
ATGCAATCGTAAAAATCGGCATAGAATCGGGTGCTGCCGCATTACTCTCC
ATTACTCGCCTGGCGAGCTGCTGGTCATTTACTCGGGGGTCCGAGTAAAA
ATCGACTCGCTTCTTGGCTGACCAATTAATCATGACTCGGTCTGTTTGGC
AGAGGGAGTTTACTCGGTGACAAATCGACTCGTATTTCACAAGTCACCCC
GGCAACTCTACTCGGGGGTCAAACCTCATAAATCAGCAATGTCTGATGCC
TCTGACCGCACGCCAAACTTCAAACTTGAACTCCGTCAGGCCCTCACGCT
CAGCGACGAGATGCAGGAGCGCCACTACATCCGCCCCGACGTTGCGCACT
TCACGTACCTCATCCACGGCTTCGGCAAGGCGGACAAGGCCAAGCGCGCC
ATCCGGCTGTTCGCGGACATGCAGAAAAGGGGCTTCCAGCCTACGGTGAG
CGAGCAAGAATGTCTGAAATTGTTGCTGAAGCTTTCGATGGAAACGAGTA
GAGCTCTGAGTAGGTGACTGACGGAGTACAAAACCTACATGCCCTACTTG
CATGTGTATGCATACCTACACAGGTTCTCACCACCGTGGAGTTACTCATG
GTAATCCACCATGGACTGGGGCAGCACCAGTTCAGTACTGTTACAACCCT
GCGTCAGTACTGTTTATCCGCTTGCACAAGCATCTACACAATAAGCACTT
TTTTGCGATATCAGCCTGCCCTGGTCTAGTGCTGTTCTGCACTTTGCATT
GGGTCCACCTTGGGTGTCCTACTCTGCCACGGTGTTTAGTTTCGTCAGCG
ACAAGGAGAGGTCAGCCGCAAGTGCCTTCCACCAATAACCGTTTATATTG
CTCAAAATGGTTGTCAACCAGAACAATCAAACAGTAACGCAAGAAAAAAC
TATGAGTCTGAAGTTAACCATTACCGCCGCCGCCGCAGCGCTGGGCTGAC
GCGTGCCCCGCTGTGCTGAGCGCTGGCATGCATACGAGTTTAAGGTTAGG
TTACGGGGGTAGGGTAAGCGAGTTAGGATCAGGGTGAGGGGGCGAGGGTT
ATGGGTAGGGGTAGGGTTAGGGTTAGGGAGTTAGGGTGAGGGTTAATCCC
TTTTTGCCCTAGCCAGCAGCGCTGGCGGGCTCGTCGCTGCAACTCGACGC
AAAGTCTGGCTTTTCTGCCCGCGAGCCGCATCCTCAGGGCCCTCCAACAC
TTGCCGCTTCACCCCTCTACACGCAGTGCAGCCCGCCACTGCAACGCGCT
GTGGGCGCAGCGCGGGACGGCTGCCGTGCGCGCACAGCTTACTGCAAGTC
AAACAAGAAAACACGGCACTCGCGACTGCTCCGCTTGCGCACGTATGAGT
CTCATGTCATGGCGTCGCCGTCGCGCCACTGGCGCTGCATCCCTGAACAA
TTTGCCTTGAATAGAAACTGTGCACGCTGCGGGCGCTTTGCGTGCTCGTG
CGCGGCTCGACTTGAGCCCCATGCACGCGTGCGCAGCGCCCATGGCTCGA
GGCTCAGGTACTACCATGGTCACTGGCAGCGAGGAAGTCACTTCAACTGG
TGACGGGCCATCACCGAGCTGCTGCGTGCTCCTGACAGTTGCGCATGCGA
GACTGCAGGATCGCCCCGTGTGTGCGCTGAGCATCTGACACGTGGACACT
GCATTGCGGCTGAAGGCAATCGCTCTGTGCGTCTCGCATGCAGAGAGCTG
CGGCATAGCTGCTAGTACTGTTACATCCGACCCCGACCGGACCTTTGCCG
CCCCTTTTCCCCCGCAGACGAAGACCTACGGCACCTCCTTCTACGTCCCC
GTAACCCTAACCGTAATCGCAATGCTGTGACCCCGTCAGGTTGGCAAACC
TCAACTGCAAGCTTAACCTCAACTGGAAGCTGCATGCTGGTCTACTGACC
CTGTCCCGAACCCTCTACCTATGGCGTAACGCGACTCTTGCAGGTGAAGA
CCTACGCCACGGCCATCTACTCATCCTAAGCCCGACCCCTAACTGTCATT
ACAACGGCAGATGGGCAAACCTCAACTGCAGTCTCAGCCTCATTGCCACA
TCTGCCGCAGGTCTACTGACCCTAATAACCTTGACCTCACCTTCGGCGTA
ACGTGTGTTATCGCAGGTGAAGACCTACGCCGCCGCCATCTACGCGGTCG
CGCGCAACGGCGAGGCAGACAAGGCGGCGGAGTTCATGCAGGTCAGTGCT
CAGTAAAATGCGCGCGCGCAGGCCATTCAGTGTGCATTCAAGCTCAGTCC
GAGGTGAGCAACCACCATGCCGCTGCTCTGCGCGGTGCGCGCGCGGTTTC
GGCGCGGCAGACAAGGCGGCGGAGTTCATGCAGGTCGGTGCTCAGTGACA
CAGGGTTAGGGTACGGTTAGGGCAGGTCAGTTAGGGTTAGGGCAGGTCAG
TTAGGGTTAGGGCGGGTCAGTGCTCAGCGCCGGCGTGCACGCACACGCGC
GCGAACCGAGTCCTGTCGCCGGTCGCAAGAGAGTAGCTCGTTCGGGGTGT
CATGGAATGCTGTCACTGGGTGCACCGGAAACCCTGTTCAGGGCGTCAAC
TTCAGCTGGCTCCAGCCCGGTGGCTCTGCCTGGTGAGCTCCTATCAGGCA
GAGTACTGTTTGGGGTACCGGACGTAGCAGCCAGAGGAAGCCTGCATGGC
GCCAGGATGGCGCACCGTGCTCGCATGTGTTTCACGCGCAGCGCGGCTCA
GCCTAAGTGTAACCCTAACTGTGGTAGCGCGTCTCAGCAGCTGTCCGCCG
CGCTTGCATTTTGACAAAGGTCCAGTCAGCGTGGCTTGCTGCAGCTGTGC
ACATCACATGTGCGCCTGGCGCTGGGAGTGCTGCAGCCACGTCAGGGTTA
GCGGTTTGGTTAGGCCACCACCATTGGTATTTTTGTGTCTGTTGCGACGG
GATGCACGGTTCACAGGCGTGCGAGCCTTGTGCTTTGCGGGCCGCTGCGC
TGATTTCTGCTGCGCATTTCGTGCGTCGGTCTCACGACGGCGTGCGGCAG
TCTAAACCCTTACCCCAACCCCTACCCCTATCGATGCGCCTCGCTTCACC
ACTCAGAGAGGACCACTGGCCCTAACCCGATCCTGTACCTTGAGCGCCCT
ATGCGCAACTTCAACCATCGCCATGGACAGACGCGCAGCCGCAGATGAGC
CAGCCAACTTCAACTTTAACTTCAAGGTCGCTCAGCGTGCCAGTCGCATG
CAGCATGCAGGGTCAGGGGGTCAAGTCTCGAGATGCGCAAAAAGCACTCC
TGCCCCGCCAGCAAGGCACAGCCCATAGGTGCAAGCCATCATCGTCATAC
GCCCCCCCGTGCTTACCCCTTGTGTCAACTTCTGATCCCCCCCGCCCCCG
CCTTCGCAGCTATCATGTGCCCCCCACGCTAAGCCCTTGCGCCAATTGCT
ACATGACCCCCCTGCCCCAGCCTTTGCAGCTATCGTTTGCCCCCCCACGC
TAAGCCCATGCGCCAACTTCTCTAACCCCCTGCCCCCTCCTTCACAGCTG
TCGCTTGCCCCCCATGCAAAGCCCTTGCGCCAGCTTCTGACCCCCCTGCC
CCCTACCTCGCTCCAACGTGCGAAGCCCTTGCGCCAGCTCCTAAACCCCC
CTGCGTCTGCTTCGCCTTTGATGGGCGCAGGCCATGAAGGACGCTGGCGT
CCAGCCCGATGTGCTGAGCCACCTGGCGCTCGCAGCAGCGCTCGACAACG
CCGGCAAAACAGACGCGGCGCGGCAAGTGCTGGAGGACATGAAGCAGGCA
AGACGGCACTGCTATTCCAGCACTTGTATCATATTATTTGCTCACAGCAG
TGCTCGACAACGCCGGCAAAATGGACGCGGCGCGGCAAGTGCTGGAGGAC
ATGAAGCAGGCAAGGCGGCACCACTTTTACAGTACTTCTTTGTAATGAAA
ACGAATCAAAAGATCGTAGAGCTCTAGGTGACAAGGTGTGGTTAGCCGCA
AATGCCTGCCACCAATTACCGTGGTCGCCGTTGCTGCAGCAGTCGGCCTT
GATGCAAACAGTGCCACCATGTATTGTAATGTGCAGCTCTACGATCTTTT
GATTCATCTCCATTACATTAGCACCACCGGCGCCAGCATGGCATCTGGCA
TACATGTTTGTAGTCGAGTGTATCATCATGCTTGCATTCAGTTGCATGCC
TGGCACGTCGGCATGCGTCTGTCGGGCGCATCCAATGCGTGTTCATCGTC
ACGCGCGTGAATCGATTTTGAATCAGTTTACAAGTACAGCGGAGTCAGTG
CCGTATTCTACGCATCACAGGTGCGACGTGTATGTGGGACGTTGACGCAT
GTAGTACCCTGTCAAATCCGCACAGGGCGCTCACTCCGATAGTGTTCTAT
GGCACACGTAAACTTCGAATATGTATGCATTCTAAACACAACGCGTCTGC
CTCTTGCACCTGCCCCCTGCATATCCCGCCCACCAAATGGCAACGATGCA
ACAGCGCACGCATGCACGACAAGTACTTGATTGAAGTTGGAGATTTGATC
TCTGCTGGTGCCGTTGCGTCCGCAGTATCCGCGCAACCCCAGACAATACC
AATAATAGCCACCAAACGCGCTCAGGCAGATGCTCATTCCATAGCCGCAA
GCATCATTCAAATCACCAAAAAGCAAAGTACGCTGCCGTACAATGGCGCA
CCCGTGTTGCGGCGAGTACAGTTCACACCTGTGCTGCACATGAACAGCAA
ACACCGCAGCAAATCTTGTTTCACACCTGTGCGGGGCCATACTGTTCTTC
GTGCTGAGGGCATGTACGTATTGCACCCCTGCGCGCGGCAGGCCGGCCTG
GAGCCCGCAAAGCTGAGCGCCGAGGTGGCTGCGCGCGCGGTGGACGTCAT
GGACCTACACGCGCACAGCCTCGTCATACAGGCGTACGCCATCTCTGCCA
GGTGAGCTGCGGATGTTTTAGGTAATTTCTTCCTTGTAGATAAAGAAAAT
CTGTTTTAAAACAATACAGGAGCAAACTACAAGTAGCATTCAAGACGTCA
TGGACCTACACGCTCATACAGGCGTTCGCCATCTCTGCAAGGTGAGGCGC
GGATGTTAAGGGAATTTCTATAAAAATAACGTTCACAAGACGAGAACAAA
CCATAAGTAGCATCCAAGACGCCATGGACCTACACGCGCACAGCCTCGTC
ATACAGGCGTACGCCATCTCCGCGGGTGACCCGCGGGTGTTGTAGGGAAT
ATCTTCTTTAAAAAATCTGTGAACAAGACAACAATCATCAGTAGTATTCA
ACATGGAGAACGATGTACTTCGAAGTATTTGTTGAAAACATTTTTCGTGG
TAGCATTGCCTGTTGCCCTAGGGATAGGCTTGTGGAGCAGTGAAGTTGGG
GGTGTCACTGCATTGCTTCCACGCGCACAGCCTGGTGATACAGGCGTACG
CCATCTCCGCCAGGCAGGTGCGGCCAGGGGTGTAGAATTTGTACTTCAAG
CTTTCTTCGAATTCTTAGTGTGGCACAGGTCAATGTTTTTCAGAAATGAA
CAAAATATCGCTGAAACTAGCGCGCCCGCACTCAGGCACGGCCTTGGCGC
AGTTGACTTCACGTGTCAAGCCAGGCTGAAATCTAGCCATGGCGCACCTG
GCGCAACTGTTGAGGCCCGCAGCGCTCACACAAGGGCTAGGGTCAGGATT
ACTAACACAAGTTGCGATTCTAACCCTAGGCAAGACGTCTCCGCCAGGTG
GAGCACGGCGCTCGCTGCCCCTGACCTCGGCTGCCGTGCTTTGCGTTGGG
GATGCGTCCTGCCGCTGTTAGAGTGTGTCGCACCTGTGGCTGTAGCAGCG
TGAAAATGCATGATTTGACCGCTGTCCGTGCCTCAGAGCATGGTGCGTCA
TTTTAGTTCAGGAAGACTGAGGATGCATCATTGACCACTGTCCATGCCTC
CAGAGTATGTTGTGTCTTTTGGATATATATGTCTTGAATCACGTGGTCCG
CTTGCAGTTAGGGCTGCAGGGGGTCCGGACACGTAGACATTGACTATAGG
TGACAGAGTGAAGGAGCGCCTGCATCCCGCTGTCCACTTGCCCACCGCTT
TGTGGCTAGTTGACAGCTCAATGCTCGTTGCTCATCGCTGCAGCAGCACC
GCGCGCACCCTGCCCGCGACGTCCGGGCTCCGGAGGCGAATGCCCTATCC
CCGCAGCCCTCTCTACTGTTTGTTGCGTGCCACCCACACAGCCGAGTGTG
ACTGCTCCCTTCCGGTCTCAACTCTAACAACTGGGCACTGCTGACCCTTC
TGCCCCCAAACCCTCCAGAAACTAAACACACCCGAGCACTGCTGCCTGCC
CCCTTACCCTCCCCCCCCCCCCCCAACCCTAACACAACCGACCATCGCTG
ACTGCTCTCCCCGGCAGGCAAGACGACATGCTAGCGTACATCAAGGCGCT
GTTCAGCTGAGCACTGCTGCCAGCCCAAACCCCATGTAGCCCGCCCAACC
ACAATTGCACCCCCTGAAACCTTAAACACTGACGCGACTGCGCCTCGCTG
ACTGCTGGCCTGGCAGGCACGACGACATGCTGGCGTACATTGAGACGCTG
TTTGCGCAGGACGGGCCGCGCCCAGACGCGCACACATACCAAATGGTCCT
GGACTCGTGCACGCGGGGTGCCGCTGGCGAAGACGTCCTGGCGGCGGTGC
GCGACAGCATGGCGCGGCACGGCGTGGCGCCGATACCTTTCGAGAAGTAC
TCGTAGTGCCTCAAGAGGGGGGGGCGATGCGCAGCCGCGGCGGCGGCGGC
GGCGGCGGCGCCGGTGGCAATGCATTCGGCGGCATCGTGCTCATCGCGGC
GGCGCCAGTGGCTACGTGA back to topCoding sequence (CDS) from alignment at Contig_165:49218..63986- >mRNA_17035 ID=mRNA_17035|Name=jgi.p|Trimin1|353467|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1317bp|location=Sequence derived from alignment at Contig_165:49218..63986- (Tribonema minus UTEX_B_3156 ) ATGGAGTTCGTGAAAAAACGAAAGCAGCAGATGGGGGCGTGGCAGAAAAA AAGGGACTCCACGCCGGAGCTGCGGGCGCGGCACGAGTTCAGAAAGGAGA TCCACGCACTGGGGCAGCGCGGCGGCTGGCAGGAGATACTGGCACGGCTG GATGCCGTGCGCGTGTCAGGGGATCCTCCCATGGACATAGGAGTGTATCA CAGGAGCATCACAGCGCTCGCCAAGTGCGACCGATTTGAGGAGGGAACTC AACTGCTAGTGGAGATGAAGGGCAAGGGCTTCCAGCCCACCGCCAAGCTC TTCAACGCGGTGATCGGCGCGGCCAGCAGGGTGGGCGCGTGGGCACGGGC GAGCCAGGAGCTGGCCACGATGCGCAACTGGGGCGTCAAGCCCGACCTCC ACTCCTACAACCTCACCATACGCGCCATGGCGCGGATGGGGCACTGGCAC AAGGCCCTCACGCTCAGCGACGAGATGCAGGAGCGCCACTACATCCGCCC CGACGTTGCGCACTTCACGTACCTCATCCACGGCTTCGGCAAGGCGGACA AGGCCAAGCGCGCCATCCGGCTGTTCGCGGACATGCAGAAAAGGGGCTTC CAGCCTACGACGAAGACCTACGGCACCTCCTTCTACGTCCCCGTGAAGAC CTACGCCGCCGCCATCTACGCGGTCGCGCGCAACGGCGAGGCAGACAAGG CGGCGGAGTTCATGCAGGCGGCGGAGTTCATGCAGGCCATGAAGGACGCT GGCGTCCAGCCCGATGTGCTGAGCCACCTGGCGCTCGCAGCAGCGCTCGA CAACGCCGGCAAAACAGACGCGGCGCGGCAAGCCGGCCTGGAGCCCGCAA AGCTGAGCGCCGAGGTGGCTGCGCGCGCGGTGGACGTCATGGACCTACAC GCGCACAGCCTCGTCATACAGGCGTACGCCATCTCTGCCAGCCTGGTGAT ACAGGCGTACGCCATCTCCGCCAGGCAGCAGCACCGCGCGCACCCTGCCC GCGACGTCCGGGCTCCGGAGGCGAATGCCCTATCCCCGCAGCCCTCTCTA CTGCACGACGACATGCTGGCGTACATTGAGACGCTGTTTGCGCAGGACGG GCCGCGCCCAGACGCGCACACATACCAAATGGTCCTGGACTCGTGCACGC GGGGTGCCGCTGGCGAAGACGTCCTGGCGGCGGTGCGCGACAGCATGGCG CGGCACGGCGTGGCGCCGATACCTTTCGAGAACCGCGGCGGCGGCGGCGG CGGCGGCGCCGGTGGCAATGCATTCGGCGGCATCGTGCTCATCGCGGCGG CGCCAGTGGCTACGTGA back to top
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