mRNA_17017 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|178424
Unique Name	mRNA_17017
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|178424 vs. uniprot
Match: A0A835Z8U3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U3_9STRA)

HSP 1 Score: 798 bits (2061), Expect = 8.070e-292
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1

Query:    1 VCNGRDDNCDGSVDEGNPGGGSACTVSSNTGACRNGTKQCTDGTIFCVPQTPTPEVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSVICVAQSPTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSGVKQCTGGTLTCNTQPPSPEVCNGIDDNCNGSVDEGNPGGGAACTVPSNNGVCRNGVQQCTGGSIICATQPPSDERCNGLDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQXXXXXXXXXXXXPSTEICNGIDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQCTGGTIVCAGASPSAEICNNIDDNCNGAVDENNPGGGAACNTGRPGACARGTTQCTGGTLVCIGPQPSPEVCGNGIDDNCNGIVDDGC 1200
            VCNGRDDNCDGSVDEGNPGGGSACTVSSNTGACRNGTKQCTDGTIFCVPQTPTPEVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSVICVAQSPTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSGVKQCTGGTLTCNTQPPSPEVCNGIDDNCNGSVDEGNPGGGAACTVPSNNGVCRNGVQQCTGGSIICATQPPSDERCNGLDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQXXXXXXXXXXXXPSTEICNGIDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQCTGGTIVCAGASPSAEICNNIDDNCNGAVDENNPGGGAACNTGRPGACARGTTQCTGGTLVCIGPQPSPEVCGNGIDDNCNGIVDDGC
Sbjct:    1 VCNGRDDNCDGSVDEGNPGGGSACTVSSNTGACRNGTKQCTDGTIFCVPQTPTPEVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSVICVAQSPTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSGVKQCTGGTLTCNTQPPSPEVCNGIDDNCNGSVDEGNPGGGAACTVPSNNGVCRNGVQQCTGGSIICATQPPSDERCNGLDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQXXXXXXXXXXXXPSTEICNGIDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQCTGGTIVCAGASPSAEICNNIDDNCNGAVDENNPGGGAACNTGRPGACARGTTQCTGGTLVCIGPQPSPEVCGNGIDDNCNGIVDDGC 400

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BLAST of jgi.p|Trimin1|178424 vs. uniprot
Match: A0A6N7PZB6_9DELT (Uncharacterized protein n=1 Tax=Polyangium spumosum TaxID=889282 RepID=A0A6N7PZB6_9DELT)

HSP 1 Score: 380 bits (975), Expect = 2.720e-115
Identity = 203/406 (50.00%), Postives = 264/406 (65.02%), Query Frame = 1

Query:    1 VCNGRDDNCDGSVDEGNPGGGSACTVSSNTGACRNGTKQCTDGTIFCVPQTPTP-EVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSVICVA-QSPTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSGVKQCTGGTLTCNTQ-PPSPEVCNGIDDNCNGSVDEGNPGGGAACTVPSNNGVCRNGVQQCTGGSIICATQ-PPSDERCNGLDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQXXXXXXXXXXXX-PSTEICNGIDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQCTGGTIVC-AGASPSAEICNNIDDNCNGAVDENNPGGGAACNTGRPGACARGTTQCTGGTLVCI-GPQPSPEVCGNGIDDNCNGIVDDG 1197
             C+G D++CDG  DEGNPGGG +CTV   +G C  G   C +G + C        E+C+G+D+NC+  +DE NPGGG SC   G  G C  GT  CT GS+ C   Q P+ E+C+G D++CDG  DE NPGG   CT     G C +G   C+ G++ CN    P+PE C+G+D+NCNG+VDEGNPG G AC+     GVC  G   C  GSI C     PS E C+GLD+NCNG+ DEG+PG G AC+TG+PG CA GTT              PS E C+G+D+NCNG+ DEGNPGGG  C+TG+ G C AGTT C+ G+I+C     PS E+C+ +D+NCNGAVD+ NPGGG +C TG+PG C+ GTT C+GGT VC    Q SPE+C +G+D++C+G +D+G
Sbjct:  642 ACDGIDNDCDGQTDEGNPGGGGSCTVPGLSGECAKGVLACQNGVLACTQVNQAQLEICDGLDNNCNAQIDENNPGGGVSCNT-GQPGICAPGTTACTDGSIKCNQNQQPSSELCDGQDNDCDGQTDENNPGGNQDCTTGL-PGICAAGKTNCSSGSIVCNPNLQPAPETCDGLDNNCNGTVDEGNPGSGVACST-GQPGVCATGTTACANGSIQCNPNIQPSPETCDGLDNNCNGTADEGDPGSGVACSTGQPGVCATGTTACTNGSIKCNPNIQPSLESCDGLDNNCNGTSDEGNPGGGAGCDTGQLGICKAGTTACSNGSILCNQNLQPSTEVCDGLDNNCNGAVDDGNPGGGLSCVTGQPGVCSAGTTACSGGTPVCNPNVQSSPEIC-DGLDNDCDGSIDEG 1043

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BLAST of jgi.p|Trimin1|178424 vs. uniprot
Match: A0A524NF48_9DELT (Choice-of-anchor D domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A524NF48_9DELT)

HSP 1 Score: 374 bits (959), Expect = 1.000e-114
Identity = 199/405 (49.14%), Postives = 266/405 (65.68%), Query Frame = 1

Query:    1 VCNGRDDNCDGSVDEGNPGGGSACTVSSNTGACRNGTKQCTDGTIFCVPQTP-TPEVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSVICVA-QSPTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSGVKQCTGGTLTC-NTQPPSPEVCNGIDDNCNGSVDEGNPGGGAACTVPSNNGVCRNGVQQCTGGSIICATQ-PPSDERCNGLDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQXXXXXXXXXXXX-PSTEICNGIDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQCTGGTIVC-AGASPSAEICNNIDDNCNGAVDENNPGGGAACNTGRPGACARGTTQCTGGTLVCIGP-QPSPEVCGNGIDDNCNGIVDD 1194
            +C+ +D++CD +VDEGNPGGG+AC      G C  GT+QCT G I CVP T  + EVC+G+D++CD +VDE +PGGGG C   G  G C  GT+ C  G++ C   Q+P+ E C+G+D++CDG+VDEGNPGGG  C  S +VG C  G +QCTGG + C     P  E C+G+D+NC+G VD+GNPG G +C+   + GVC  G +QCT GS++C      S E C+GLD++C+G+ D+G+PGGG  C TG PGACA GT +             PS E CNGIDD+C+G+VD+GNPGGGGAC TG  G C  G+  C  G + C A AS   EICN  D++C+G  D+ +PGGG AC++G+PG CA G   C  G LVC G   P  E+C  G+D++C+G  D+
Sbjct:  804 LCDNKDNDCDAAVDEGNPGGGAACATG-QPGVCAAGTEQCTAGQIQCVPDTTASAEVCDGLDNDCDSAVDENDPGGGGVCGT-GQAGVCAAGTQACVAGTLQCEPDQAPSTETCDGLDNDCDGTVDEGNPGGGASCGTS-DVGECSLGTQQCTGGAVICVGNIDPGAERCDGLDNNCDGVVDDGNPGAGTSCSTGLS-GVCAAGAEQCTAGSLVCVPDIAASPEVCDGLDNDCDGATDDGDPGGGAPCATGNPGACATGTERCQLGQIVCQPDALPSAETCNGIDDDCDGAVDQGNPGGGGACTTGLAGICGPGSVACANGNLRCEAVASAQPEICNGEDEDCDGVADDGDPGGGGACDSGQPGICAAGIEHCEVGALVCTGDVTPETEICSTGVDEDCDGATDE 1204

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BLAST of jgi.p|Trimin1|178424 vs. uniprot
Match: A0A661PF39_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661PF39_9DELT)

HSP 1 Score: 360 bits (925), Expect = 1.410e-114
Identity = 205/416 (49.28%), Postives = 255/416 (61.30%), Query Frame = 1

Query:    1 VCNGRDDNCDGSVDEGNP---GGGSACTVSS----NTGACRNGTKQCTDGTIF-CV-PQTPTPEVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSVICVAQ-SPTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSGVKQCTGGTLTC-NTQPPSPEVCNGIDDNCNGSVDEGNPGGGAACTVPSNNGVCRNGVQQCTGGSIICATQPPSD-ERCNGLDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQXXXXXXXXXXXXPST-EICNGIDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQCTGGTIVCAGASPSA-EICNNIDDNCNGAVDENNPGGGAACNT-GRPGACARGTTQCTGGTLVCIGPQ-PSPEVCGNGIDDNCNGIVDDGC 1200
             C+G DDNCDG VDEG     G    C   S    N G C +G + C +G    CV  QTPT E C+G+D++CD   DE +PGGG SC ++G +G C  G + C  G + C     P+ E CNG+DDNCDG  DEGNPGGG  C     +G C+ G+ +C  G+LTC  T  P  E CNG+DD+C+GSVDE NPGGG  C+   N G+C  G QQC  G + C     S  E CNGLDD+C+G+ DEGNPGGG AC+TG  G C AG  Q             +T E CNG+DD+C+GSVDE NPGGGGAC+TG  G C+AGT QC  G++ C   + +  E+CN +DD+C+G+ DENNPGGGA C   G+ G C  GT  C  G L C     P  EVCGNG+DDNC+G  D+GC
Sbjct:  189 TCDGTDDNCDGQVDEGCTCVNGTSQPCYTGSPQTQNVGECEDGIQTCVNGLYGNCVGDQTPTSETCDGLDNDCDTQTDENDPGGGSSC-ITGLSGVCSPGIEHCVSGQLDCEQNVQPSSETCNGLDDNCDGQFDEGNPGGGAACDTGL-LGICKPGLFECQNGSLTCVQTTQPGTESCNGLDDDCDGSVDENNPGGGGVCST-GNPGICDAGTQQCQNGGLQCVQDNTSSPETCNGLDDDCDGATDEGNPGGGSACSTGNSGICDAGIEQCQNGSLSCVQTNTATTESCNGLDDDCDGSVDENNPGGGGACSTGLQGICSAGTNQCQNGSLSCVQTNAATTEVCNGLDDDCDGSTDENNPGGGANCLVPGQQGECENGTVNCVTGALQCEQTIFPINEVCGNGLDDNCDGSTDEGC 601

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BLAST of jgi.p|Trimin1|178424 vs. uniprot
Match: A0A6N7PHJ0_9DELT (Uncharacterized protein n=1 Tax=Polyangium spumosum TaxID=889282 RepID=A0A6N7PHJ0_9DELT)

HSP 1 Score: 343 bits (881), Expect = 1.270e-106
Identity = 184/394 (46.70%), Postives = 253/394 (64.21%), Query Frame = 1

Query:   43 EGNPGGGSACTVSSNTGACRNGTKQCTDGTIFCVPQT-PTPEVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSVICVAQS-PTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSGVKQCTGGTLTC-NTQPPSPEVCNGIDDNCNGSVDEGNPGGGAACTVPSNNGVCRNGVQQCTGGSIICA-TQPPSDERCNGLDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQXXXXXXXXXXXX-PSTEICNGIDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQCTGGTIVC-AGASPSAEICNNIDDNCNGAVDENNPGGGAACN-TGRPGACARGTTQCTGGTLVCIGPQ-PSPEVCGNGIDDNCNGIVDDGC 1200
            EGNPGGG+AC      G C +GT           P   P+ E+C+G+D+NC+G+ DE NPGGGG+C            T QC  G++ CV  + P+ E+C+  D++CDG +DEGNPGGGG C+V   +G C +G  QC GG L C  T  PS E C+G+D++C+G  DE NPGGG AC+     G+C  G Q C+ G+++CA T  P+ E C+G D++C+G  DE NPGGG +C TG+PG C+AG TQ             P+ E C+G+D++C+G  DE NPGGG ACNTG+PG CAAGTT C GG+++C    +P+ E C+ +D++CNG +D  NPGGGAAC  +G+ G CA+GTT CTGG + C     P+ EVC +G D++C+  +D+GC
Sbjct:  407 EGNPGGGNACQTG-QLGVCASGTSTXXXXXXXXAPIVQPSVEICDGLDNNCNGATDESNPGGGGACXXXXXXXXXXX-TFQCQNGALSCVQTTQPSIEICDTKDNDCDGQIDEGNPGGGGACSVPGKLGVCVAGTFQCQGGALACVQTTQPSAETCDGLDNDCDGQTDENNPGGGGACST-GQPGLCGAGTQTCSNGTLVCAATVQPAPEICDGKDNDCDGQTDENNPGGGTSCATGQPGVCSAGVTQCTGGALGCAPTVQPTAETCDGLDNDCDGQTDENNPGGGAACNTGQPGVCAAGTTLCAGGSLLCNQNVAPTGEACDGLDNDCNGQIDNGNPGGGAACTVSGQSGECAKGTTACTGGAVSCSQTIFPTSEVCSDGKDNDCDNQIDEGC 797

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BLAST of jgi.p|Trimin1|178424 vs. uniprot
Match: A0A524NLG0_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A524NLG0_9DELT)

HSP 1 Score: 326 bits (835), Expect = 4.310e-101
Identity = 189/364 (51.92%), Postives = 241/364 (66.21%), Query Frame = 1

Query:  124 DGTIFCVPQTPTPEVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSVICVAQ-SPTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSGVKQCTGGTLTC-NTQPPSPEVCNGIDDNCNGSVDEGNPGGGAACT--VPSNNGVCRNGVQQCTGGSIICATQPP-SDERCNGLDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQXXXXXXXXXXXX-PSTEICNGIDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQCTGGTIVCAGASPSAEICNNIDDNCNGAVDENNPGGGAACNTGRPGACARGTTQCTGGTLVCIGP-QPSPEVCGNGIDDNCNGIVDD 1194
            D T+F       PEVCNG+D+NCDG+ D+GNPGGG SC VSG  G C  GT  CT G+VICV    P  E+C+G+D++CDG  D GNPGGG  C  SS VG C+ GV+ C  G + C     P+ E+CNG+DD+C+G+ D+GNPG GA+C+  VP   GVC  G +QC GG I+C      S E C+ LD++C+GSVDEG   GG AC TG  G        XXXXXXXXX    PS E CNG+DD+C+G+VDE NPGGG +C+TG PG CA G T C  G + C   S +AEIC+ +D++C+G VD  NPGGGA C +  PG CA GT QCTGG++ C+    P  E+CG+G D++C+G VD+
Sbjct:  260 DDTVF----PGAPEVCNGVDENCDGTADDGNPGGGASCGVSG-VGECALGTLTCTAGAVICVGNIDPAVEICDGLDNDCDGVADNGNPGGGATCG-SSAVGECELGVEACVAGAIACVGNVEPAAEICNGLDDDCDGTADDGNPGSGASCSTGVP---GVCAAGTEQCQGGGIVCVQDTSASAEVCDTLDNDCDGSVDEGT--GGAACATGDLGVXXXXXXXXXXXXXXXXANSGPSPESCNGLDDDCDGTVDENNPGGGTSCSTGLPGVCADGVTACQAGLLQCVADSGTAEICDGLDNDCDGVVDNGNPGGGAGCTSTEPGICAAGTQQCTGGSIACVSDVTPEAEICGSGEDEDCDGTVDE 612

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BLAST of jgi.p|Trimin1|178424 vs. uniprot
Match: UPI00146B6700 (MopE-related protein n=1 Tax=Polyangium aurulentum TaxID=2567896 RepID=UPI00146B6700)

HSP 1 Score: 320 bits (820), Expect = 2.850e-97
Identity = 197/452 (43.58%), Postives = 245/452 (54.20%), Query Frame = 1

Query:    1 VCNGRDDNCDGSVDEGNPGGGSACTVSSNTGACRNGTKQCTDGTIFCVP-QTPTPEVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSVICVAQS-PTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSGVKQCTGGTLTC-NTQPPSPEVCNGIDDNCNGSVDEGNPGGGAACTVPSNNGVCRNGVQQCTGGSIICA-TQPPSDERCNGLDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQXXXXXXXXXXXX-PSTEICNGIDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQCT---------------------------------GGTIVCAGASP-----------------------SAEICNNIDDNCNGAVDENNPGGGAACNTGRPGACARGTTQCTGGTLVCI-GPQPSP-EVCGNGID 1167
             C+G+D+NC+G  DE NPGGG AC V+   G C  GT  C +G I C   Q P+ E C+G+D+NC+G+ DE NPGGGG+C+  G  G C  G+  CTGG ++C   S PT E+CNG DD+C+G+VD+GNPG GG C      G C +G  QC GG L C  T  P  EVC+G D++C+G VDE    GG AC      G+C  G             T  P  E C+GLD+NCNG  DEGNPGGG AC+TG+PG C AGTT              PS E+C+G+D+NC+G+ DEGNPGGG AC+TG PG C+ G T                                    GG + C    P                       + EIC+  D++CNG VD  NPGGG ACNTG+ G CA GTT CTGG L C    QP+  E CGN +D
Sbjct:  388 ACDGKDNNCNGQSDENNPGGGQAC-VTGKLGVCAAGTTACANGAIACNQNQQPSVESCDGLDNNCNGATDENNPGGGGACST-GKPGICAAGSLTCTGGQLVCNQTSQPTVELCNGKDDDCNGTVDDGNPGSGGACNTG-KPGVCSAGSFQCQGGALACVQTSQPGTEVCDGKDNDCDGLVDENT--GGQACXXXKL-GICAAGTXXXXXXXXXXTQTSQPGTEICDGLDNNCNGGTDEGNPGGGAACSTGKPGICGAGTTTCTSGALTCNQNQQPSVEVCDGLDNNCSGAADEGNPGGGAACSTGLPGVCSTGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDEGNPGGGVACNTGKPGVCSAGTTAXXXXXXXXXQTTQATTEICDGKDNDCNGVVDNGNPGGGGACNTGKLGICAAGTTTCTGGALACSQNQQPAATENCGNTLD 833

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BLAST of jgi.p|Trimin1|178424 vs. uniprot
Match: A0A6N7PT72_9DELT (MAM domain-containing protein n=2 Tax=Polyangium spumosum TaxID=889282 RepID=A0A6N7PT72_9DELT)

HSP 1 Score: 311 bits (797), Expect = 1.040e-93
Identity = 175/366 (47.81%), Postives = 220/366 (60.11%), Query Frame = 1

Query:   43 EGNPGGGSACTVSSNTGACRNGTKQCTDGTIFCVPQT-PTPEVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSVICVAQS-PTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSGVKQCTGGTLTC-NTQPPSPEVCNGIDDNCNGSVDEGNPGGGAACTVPSNNGVCRNGVQQCTGGSIIC-ATQPPSDERCNGLDDNCNGSVDEGNPGGGGACNTGRPGACAAG-TTQXXXXXXXXXXXXPSTEICNGIDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQCTGGTIVCAGA-SPSAEICNNIDDNCNGAVDENNPGGGAACNTGRPGACARGTTQCTGGTLVC 1122
            EGNPGGG AC      GAC  GT+ C+ G + C+    P  E CNG DD+CDG  DE NPGGG +C   G  G C  G+  C GG ++C   + P+ E C+G D+NC+G+VDE NPGGG  C      G C +G   C  G L C  T  PS EVC+G+D+NCNGS DEGNPG G  C+     G C  G+ QC GG ++C +T  P+ E C+  D++C+G VDE NPGGG AC+TG+ G C AG TT             PS E+C+G+D++C+G VDEG   G  AC TG+PG C AGT  C  G+ VC    SPSAE+C+ +D++C+G  DE NPGGG  C    P  C   TTQC  G LVC
Sbjct:  452 EGNPGGGGACQTGL-AGACAQGTQACSGGVLQCMATVQPVAESCNGKDDDCDGQTDEQNPGGGITCNT-GQLGVCAQGSTACQGGGIVCNPNNQPSVETCDGFDNNCNGAVDEQNPGGGTPCQTG-KPGICAAGTTACQNGQLACVQTNQPSLEVCDGLDNNCNGSADEGNPGSGGVCSTGLP-GACGAGIYQCQGGGLVCVSTTMPTTEICDNKDNDCDGMVDENNPGGGMACSTGQQGVCGAGMTTCAGGLVVCTPTTLPSAEVCDGLDNDCDGVVDEGTASG--ACTTGQPGVCGAGTLVCQSGSTVCVPTNSPSAEVCDGLDNDCDGTTDEGNPGGGMVCGPTLPAPCTNNTTQCVNGALVC 811

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BLAST of jgi.p|Trimin1|178424 vs. uniprot
Match: A0A661PJ07_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661PJ07_9DELT)

HSP 1 Score: 292 bits (748), Expect = 2.770e-89
Identity = 188/421 (44.66%), Postives = 243/421 (57.72%), Query Frame = 1

Query:    1 VCNGRDDNCDGSVDEG---NPGGGSACTVSS----NTGACRNGTKQCTDGTIF-CVPQ-TPTPEVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSVIC-VAQSPTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSGVKQCTGGTLTCN-TQPPSPEVCNGIDDNCNGSVDEGNPGGGAACTVPSNNGVCRNGVQQCTGGSIICA-TQPPSDERCNGLDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQXXXXXXXXXXXX-PSTEICNGIDDN--------------CNGSVDEGNPGGGGACNTGRPGACAAGTTQCTGGTI-VCAG-ASPSAEICNNIDDNCNGAVDENNPGGGAACNTGRPGACARGTTQCTGGTLVC-IGPQPSPEVCGNGIDDN 1173
             C G DD+CDG VDEG     G   +C  ++    N G C++G++ C  G    C    TP  E C+G+D++CDG+ DEG+P GGG+C+  G  G C  GT  C+ GS+ C     P+ E+CNG+DDNCDGS DEGNP GG  C     +G C+ G  QC  G L C  T  PS E CN +DD+C+GSVDEGNP GG AC      GVC  G +QC+GGS++C   Q  + E C+GLD++C+G  DEG+PGGG  C+TG PG CA G TQ             PS E+C+G  DN                       PGG     T   G C AG   CTGG    C G  +PS + C+ +D++CNGAVD+ +PGGG AC TG+ G CA GTTQC+GG++VC     PS EVC +G+D++
Sbjct:  137 TCEGTDDDCDGQVDEGCSCTNGNTQSCYTAAPSTQNVGECQDGSQTCAAGLWDPCSGDVTPVTETCDGLDNDCDGTSDEGDPEGGGNCST-GQQGVCDAGTLHCSNGSLGCDQTVQPSTELCNGLDDNCDGSTDEGNPEGGAACDTGL-LGTCKIGSFQCLNGQLACTQTVQPSAEQCNALDDDCDGSVDEGNPQGGTACAT-GQLGVCGPGTEQCSGGSLLCQQNQISTAEICDGLDNDCDGGTDEGDPGGGVTCSTGVPGPCADGITQCSNGGVICNQVTFPSPEVCDGGLDNDXXXXXXXXXXXXXXXXXXXXXGPGG-----TQGVGECVAGLQTCTGGAWGTCVGEVTPSTDSCDGLDNDCNGAVDQGDPGGGQACTTGQSGVCAAGTTQCSGGSIVCNANNSPSAEVC-DGLDND 548

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BLAST of jgi.p|Trimin1|178424 vs. uniprot
Match: A0A2E5HKJ0_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E5HKJ0_9DELT)

HSP 1 Score: 277 bits (708), Expect = 1.320e-84
Identity = 158/312 (50.64%), Postives = 188/312 (60.26%), Query Frame = 1

Query:  136 FCVPQTPTPEVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSVICVAQ-SPTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSG-VKQCTGGTLTCNTQPPSPEVCNGIDDNCNGSVDEGNPGGGAACTVPSNNGVCRNGVQQCTGGSIICAT-QPPSDERCNGLDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQXXXXXXXXXXXX-PSTEICNGIDDNCNGSVDEGNPGGGGACNTGRPGACAAGTTQCTGGTIVCA-GASPSAEICNNIDDNCNGAVDENNPGGGAAC 1056
            FC       EVCNG DDNCDG VDEG  GGG +C   G  G C  G   C GG V CV +  P PE CNG DDNCDG +DEGNPGGG  C    + G C  G +            + P  E CNG DDNC+G +DEGNPGGGA+C      GVC  GV++C G  I+C   + PSDE CNG DDNCNGS+DEGNPG GG C+T + G C  GT Q             P  E CNG DDNC+G+VDEGNPGGGGAC+TG+ G C  GT QC+GG +VC     P AE+C+ +D++C+G +D     GG+ C
Sbjct:    8 FCERSDDGVEVCNGRDDNCDGRVDEGELGGGEACDT-GEEGVCALGELVCGGGEVRCVRRRDPLPESCNGEDDNCDGRIDEGNPGGGASCNTGGD-GVCADGTLXXXXXXXXXVQLREPEAESCNGRDDNCDGRIDEGNPGGGASCNT-GGMGVCGVGVERCMGSEIVCVQDRQPSDELCNGEDDNCNGSIDEGNPGSGGVCDTEQDGICGPGTLQCAEGGLVCQRNEDPRPETCNGEDDNCDGAVDEGNPGGGGACDTGQDGNCGPGTLQCSGGGLVCQRNTGPQAEVCDGVDNDCDGVID-----GGSVC 311

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|178424 vs. uniprot

BLAST of jgi.p|Trimin1|178424 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z8U3_9STRA	8.070e-292	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6N7PZB6_9DELT	2.720e-115	50.00	Uncharacterized protein n=1 Tax=Polyangium spumosu...	[more]
A0A524NF48_9DELT	1.000e-114	49.14	Choice-of-anchor D domain-containing protein n=1 T...	[more]
A0A661PF39_9DELT	1.410e-114	49.28	Uncharacterized protein n=1 Tax=Deltaproteobacteri...	[more]
A0A6N7PHJ0_9DELT	1.270e-106	46.70	Uncharacterized protein n=1 Tax=Polyangium spumosu...	[more]
A0A524NLG0_9DELT	4.310e-101	51.92	Uncharacterized protein (Fragment) n=1 Tax=Myxococ...	[more]
UPI00146B6700	2.850e-97	43.58	MopE-related protein n=1 Tax=Polyangium aurulentum...	[more]
A0A6N7PT72_9DELT	1.040e-93	47.81	MAM domain-containing protein n=2 Tax=Polyangium s...	[more]
A0A661PJ07_9DELT	2.770e-89	44.66	Uncharacterized protein (Fragment) n=1 Tax=Deltapr...	[more]
A0A2E5HKJ0_9DELT	1.320e-84	50.64	Uncharacterized protein n=1 Tax=Myxococcales bacte...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_169	contig	Contig_169:199439..200641 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|178424\|e_gw1.169.18.1
KEGG TC	3.A.1.5
BRITE	ko00000,ko00001,ko00002,ko02000
KEGG Module	M00239
KEGG Pathway	ko02024,map02024
KEGG ko	ko:K02034
Description	guanyl-nucleotide exchange factor activity
COG category	DZ
Max annot lvl	2\|Bacteria
EggNOG OGs	COG5184@1\|root,COG5184@2\|Bacteria
Evalue	1.39e-56
Seed ortholog	1192034.CAP_2190
Hectar predicted targeting category	other localisation
TranscriptId	178746
Track	FilteredModels1
ProteinId	178424

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|178424	gene_17017	Tribonema minus UTEX_B_3156	gene	Contig_169 199439..200641 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17017_1	exon_17017_1	Tribonema minus UTEX_B_3156	exon	Contig_169 199439..200641 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17017	CDS_17017	Tribonema minus UTEX_B_3156	CDS	Contig_169 199439..200641 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|178424	Trimin1\|178424\|e_gw1.169.18.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_169 199439..200641 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_169:199439..200641-
coding sequence from alignment at Contig_169:199439..200641-

spliced messenger RNA

>mRNA_17017 ID=mRNA_17017|Name=jgi.p|Trimin1|178424|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1203bp|location=Sequence derived from alignment at Contig_169:199439..200641- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTCTGCAATGGCCGCGACGACAACTGCGATGGCTCTGTCGACGAGGGCAA
TCCCGGCGGCGGTAGCGCCTGCACCGTTTCCAGCAACACTGGCGCTTGCC
GCAACGGCACCAAGCAGTGCACCGACGGCACAATCTTCTGCGTGCCGCAG
ACGCCTACACCCGAGGTGTGCAACGGCATCGACGACAACTGCGATGGCTC
AGTCGACGAGGGCAATCCTGGTGGCGGCGGTAGTTGCACTGTCTCCGGCA
ACACTGGTGCTTGCCAAAACGGCACCAAGCAGTGCACAGGCGGCAGTGTC
ATTTGCGTTGCGCAATCCCCTACACCCGAGGTGTGCAACGGCATAGACGA
CAACTGCGATGGCTCAGTCGACGAGGGCAACCCTGGCGGCGGCGGCGTGT
GCACTGTTTCCAGCAACGTCGGTGCTTGCCAAAGCGGTGTCAAGCAGTGC
ACCGGCGGTACACTCACTTGCAATACTCAGCCCCCTTCACCCGAGGTGTG
CAACGGCATTGACGACAACTGCAACGGCTCAGTCGACGAGGGCAATCCCG
GTGGCGGCGCTGCCTGCACCGTTCCCAGCAACAACGGCGTTTGCCGCAAC
GGCGTTCAGCAGTGCACTGGCGGCTCGATCATCTGCGCTACCCAGCCCCC
TTCCGACGAGCGGTGCAACGGTCTCGACGACAATTGCAATGGCTCAGTCG
ACGAGGGCAACCCTGGCGGCGGCGGCGCTTGCAACACGGGCCGCCCCGGC
GCTTGCGCTGCTGGCACCACGCAGTGCGCCGGCGGCACAATCGTTTGCGC
CGGGGCGTCACCCTCAACTGAGATCTGCAACGGCATCGACGACAACTGCA
ACGGCTCAGTCGACGAGGGCAACCCTGGCGGCGGCGGCGCTTGCAACACG
GGCCGTCCCGGCGCTTGCGCTGCTGGCACCACGCAGTGCACCGGCGGCAC
AATCGTTTGCGCCGGGGCGTCCCCCTCGGCCGAGATATGCAACAACATCG
ACGACAACTGCAACGGCGCAGTCGACGAGAACAACCCGGGGGGTGGGGCT
GCCTGCAACACGGGCCGTCCCGGCGCTTGCGCCCGCGGCACTACACAGTG
CACAGGCGGCACTCTTGTGTGCATTGGGCCGCAACCCTCGCCCGAGGTGT
GCGGCAACGGCATTGACGACAACTGCAACGGCATAGTCGACGACGGCTGT
TGA

protein sequence of jgi.p|Trimin1|178424

>Trimin1|178424|e_gw1.169.18.1 ID=Trimin1|178424|e_gw1.169.18.1|Name=jgi.p|Trimin1|178424|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=401bp
VCNGRDDNCDGSVDEGNPGGGSACTVSSNTGACRNGTKQCTDGTIFCVPQ
TPTPEVCNGIDDNCDGSVDEGNPGGGGSCTVSGNTGACQNGTKQCTGGSV
ICVAQSPTPEVCNGIDDNCDGSVDEGNPGGGGVCTVSSNVGACQSGVKQC
TGGTLTCNTQPPSPEVCNGIDDNCNGSVDEGNPGGGAACTVPSNNGVCRN
GVQQCTGGSIICATQPPSDERCNGLDDNCNGSVDEGNPGGGGACNTGRPG
ACAAGTTQCAGGTIVCAGASPSTEICNGIDDNCNGSVDEGNPGGGGACNT
GRPGACAAGTTQCTGGTIVCAGASPSAEICNNIDDNCNGAVDENNPGGGA
ACNTGRPGACARGTTQCTGGTLVCIGPQPSPEVCGNGIDDNCNGIVDDGC
*

mRNA from alignment at Contig_169:199439..200641-

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17017 ID=mRNA_17017|Name=jgi.p|Trimin1|178424|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1203bp|location=Sequence derived from alignment at Contig_169:199439..200641- (Tribonema minus UTEX_B_3156 )
GTCTGCAATGGCCGCGACGACAACTGCGATGGCTCTGTCGACGAGGGCAA
TCCCGGCGGCGGTAGCGCCTGCACCGTTTCCAGCAACACTGGCGCTTGCC
GCAACGGCACCAAGCAGTGCACCGACGGCACAATCTTCTGCGTGCCGCAG
ACGCCTACACCCGAGGTGTGCAACGGCATCGACGACAACTGCGATGGCTC
AGTCGACGAGGGCAATCCTGGTGGCGGCGGTAGTTGCACTGTCTCCGGCA
ACACTGGTGCTTGCCAAAACGGCACCAAGCAGTGCACAGGCGGCAGTGTC
ATTTGCGTTGCGCAATCCCCTACACCCGAGGTGTGCAACGGCATAGACGA
CAACTGCGATGGCTCAGTCGACGAGGGCAACCCTGGCGGCGGCGGCGTGT
GCACTGTTTCCAGCAACGTCGGTGCTTGCCAAAGCGGTGTCAAGCAGTGC
ACCGGCGGTACACTCACTTGCAATACTCAGCCCCCTTCACCCGAGGTGTG
CAACGGCATTGACGACAACTGCAACGGCTCAGTCGACGAGGGCAATCCCG
GTGGCGGCGCTGCCTGCACCGTTCCCAGCAACAACGGCGTTTGCCGCAAC
GGCGTTCAGCAGTGCACTGGCGGCTCGATCATCTGCGCTACCCAGCCCCC
TTCCGACGAGCGGTGCAACGGTCTCGACGACAATTGCAATGGCTCAGTCG
ACGAGGGCAACCCTGGCGGCGGCGGCGCTTGCAACACGGGCCGCCCCGGC
GCTTGCGCTGCTGGCACCACGCAGTGCGCCGGCGGCACAATCGTTTGCGC
CGGGGCGTCACCCTCAACTGAGATCTGCAACGGCATCGACGACAACTGCA
ACGGCTCAGTCGACGAGGGCAACCCTGGCGGCGGCGGCGCTTGCAACACG
GGCCGTCCCGGCGCTTGCGCTGCTGGCACCACGCAGTGCACCGGCGGCAC
AATCGTTTGCGCCGGGGCGTCCCCCTCGGCCGAGATATGCAACAACATCG
ACGACAACTGCAACGGCGCAGTCGACGAGAACAACCCGGGGGGTGGGGCT
GCCTGCAACACGGGCCGTCCCGGCGCTTGCGCCCGCGGCACTACACAGTG
CACAGGCGGCACTCTTGTGTGCATTGGGCCGCAACCCTCGCCCGAGGTGT
GCGGCAACGGCATTGACGACAACTGCAACGGCATAGTCGACGACGGCTGT
TGA

Coding sequence (CDS) from alignment at Contig_169:199439..200641-

>mRNA_17017 ID=mRNA_17017|Name=jgi.p|Trimin1|178424|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1203bp|location=Sequence derived from alignment at Contig_169:199439..200641- (Tribonema minus UTEX_B_3156 )
GTCTGCAATGGCCGCGACGACAACTGCGATGGCTCTGTCGACGAGGGCAA
TCCCGGCGGCGGTAGCGCCTGCACCGTTTCCAGCAACACTGGCGCTTGCC
GCAACGGCACCAAGCAGTGCACCGACGGCACAATCTTCTGCGTGCCGCAG
ACGCCTACACCCGAGGTGTGCAACGGCATCGACGACAACTGCGATGGCTC
AGTCGACGAGGGCAATCCTGGTGGCGGCGGTAGTTGCACTGTCTCCGGCA
ACACTGGTGCTTGCCAAAACGGCACCAAGCAGTGCACAGGCGGCAGTGTC
ATTTGCGTTGCGCAATCCCCTACACCCGAGGTGTGCAACGGCATAGACGA
CAACTGCGATGGCTCAGTCGACGAGGGCAACCCTGGCGGCGGCGGCGTGT
GCACTGTTTCCAGCAACGTCGGTGCTTGCCAAAGCGGTGTCAAGCAGTGC
ACCGGCGGTACACTCACTTGCAATACTCAGCCCCCTTCACCCGAGGTGTG
CAACGGCATTGACGACAACTGCAACGGCTCAGTCGACGAGGGCAATCCCG
GTGGCGGCGCTGCCTGCACCGTTCCCAGCAACAACGGCGTTTGCCGCAAC
GGCGTTCAGCAGTGCACTGGCGGCTCGATCATCTGCGCTACCCAGCCCCC
TTCCGACGAGCGGTGCAACGGTCTCGACGACAATTGCAATGGCTCAGTCG
ACGAGGGCAACCCTGGCGGCGGCGGCGCTTGCAACACGGGCCGCCCCGGC
GCTTGCGCTGCTGGCACCACGCAGTGCGCCGGCGGCACAATCGTTTGCGC
CGGGGCGTCACCCTCAACTGAGATCTGCAACGGCATCGACGACAACTGCA
ACGGCTCAGTCGACGAGGGCAACCCTGGCGGCGGCGGCGCTTGCAACACG
GGCCGTCCCGGCGCTTGCGCTGCTGGCACCACGCAGTGCACCGGCGGCAC
AATCGTTTGCGCCGGGGCGTCCCCCTCGGCCGAGATATGCAACAACATCG
ACGACAACTGCAACGGCGCAGTCGACGAGAACAACCCGGGGGGTGGGGCT
GCCTGCAACACGGGCCGTCCCGGCGCTTGCGCCCGCGGCACTACACAGTG
CACAGGCGGCACTCTTGTGTGCATTGGGCCGCAACCCTCGCCCGAGGTGT
GCGGCAACGGCATTGACGACAACTGCAACGGCATAGTCGACGACGGCTGT
TGA